Human microRNA genes are frequently located at fragile sites and genomic regions involved in cancers

Proceedings of the National Academy of Sciences of the United States of America

Volumn 101, Issue 9, 2004, Pages 2999-3004

  Calin, George Adrian ^a   Sevignani, Cinzia ^a   Dumitru, Calin Dan ^a   Hyslop, Terry ^a   Noch, Evan ^a   Yendamuri, Sai ^a   Shimizu, Masayoshi ^a   Rattan, Sashi ^a   Bullrich, Florencia ^a   Negrini, Massimo ^a,b   Croce, Carlo M ^a,c  

^a THOMAS JEFFERSON UNIVERSITY   (United States)

^b UNIVERSITY OF FERRARA   (Italy)

^c THOMAS JEFFERSON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CANCER; CANCER SURVIVAL; CHRONIC LYMPHATIC LEUKEMIA; DNA MICROARRAY; GENE AMPLIFICATION; GENE DELETION; GENE FREQUENCY; GENE LOCATION; GENE MUTATION; GENOME ANALYSIS; HETEROZYGOSITY; HUMAN; HUMAN CELL; NORTHERN BLOTTING; PRIORITY JOURNAL; RECEPTOR DOWN REGULATION; RNA GENE; RNA TRANSCRIPTION; SAMPLING;

CHROMOSOME FRAGILE SITES; CHROMOSOME MAPPING; CLONING, MOLECULAR; DATABASES, NUCLEIC ACID; GENES, HOMEOBOX; GENETIC MARKERS; GENOME, HUMAN; HUMANS; LOSS OF HETEROZYGOSITY; MICRORNAS; MULTIGENE FAMILY; NEOPLASMS; PUBMED;

EID: 12144290519     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0307323101     Document Type: Article

References (50)

1. Ke, X.-S., Liu, C.-M., Liu, D.-P. & Liang, C.-C. (2003) Curr. Opin. Chem. Biol. 7, 516-523.
2. Moss, E. G. (2003) MicroRNAs in Noncoding RNAs: Molecular Biology and Molecular Medicine (Eurekah.com), pp. 98-114.
3. Pasquinelli, A. E., Reinhart, B. J., Slack F., Martindale, M. Q., Kuroda, M. I., Maller, B., Hayward, D. C., Ball, E. E., Degnan, B., Muller, P., et al. (2000) Nature 408, 86-89.
4. Ambros, V. (2003) Cell 113, 673-676.
5. Xu, P., Vernooy, S. Y., Guo, M. & Hay, B. A. (2003) Curr. Biol. 13, 790-795.
6. Brennecke, J., Hipfner, D. R., Stark, A., Russell, R. B. & Cohen, S. M. (2003) Cell 113, 25-36.
7. Pasquinelli, A. E. (2002) Trends Genet. 18, 171-173.
8. Lai, E. C. (2002) Nat. Genet. 30, 363-364.
9. Calin, G. A., Dumitru, C. D., Shimizu, M., Bichi, R., Zupo, S., Noch, E., Aldler, H., Rattan, S., Keating, M., Rai, K., et al. (2002) Proc. Natl. Acad. Sci. USA 99, 15524-15529.
10. Bullrich, F. & Croce, C. M. (2001) Chronic Lymphoid Leukemia (Dekker, New York).
11. Lim, L. P., Glasner, M. E., Yekta, S., Burge, C. B. & Bartel, D. P. (2003) Science 299, 1540.
12. Lagos-Quintana, M., Rauhut, R., Lendeckel, W. & Tuschl, T. (2001) Science 294, 853-858.
13. Lau, N. C., Lim, L. P., Weinstein, E. G. & Bartel, D. P. (2001) Science 294, 858-862.
14. Lee, R. C. & Ambros, V. (2001) Science 294, 862-864.
15. Mourelatos, Z., Dostie, J., Paushkin, S., Sharma, A., Charroux, B., Abel, L., Rappsilber, J., Mann, M. & Dreyfuss, G. (2002) Genes Dev. 16, 720-728.
16. Lagos-Quintana, M., Rauhut, R., Yalcin, A., Meyer, J., Lendeckel, W. & Tuschl, T. (2002) Curr. Biol. 12, 735-739.
17. Dostie, J., Mourelatos, Z., Yang, M., Sharma, A. & Dreyfuss, G. (2003) RNA 9, 180-186.
18. Houbaviy, H. B., Murray, M. F. & Sharp, P. A. (2003) Dev. Cell 5, 351-358.
19. Ohta, M., Inoue, H., Cotticelli, M., Kastury, K., Baffa, R., Palazzo, J., Siprashvili, Z., Mori, M., McCue, P. & Druck, T. (1996) Cell 84, 587-597.
20. Paige, A. J., Taylor, K. J., Taylor, C., Hillier, S. G., Farrington, S., Scott, D., Porteous, D. J., Smyth, J. F., Gabra, H. & Watson, J. E. (2001) Proc. Natl. Acad. Sci. USA 98, 11417-11422.
21. Cesari, R., Martin, E. S., Calin, G. A., Pentimalli, F., Bichi, R., McAdams, H., Trapasso, F., Drusco, A., Shimizu, M., Masciullo, V., et al. (2003) Proc. Natl. Acad. Sci. USA 100, 5956-5961.
22. Arlt, M. F., Casper, A. M. & Glover, T. W. (2003) Cytogenet. Genome Res. 100, 92-100.
23. Richards, R. I. (2001) Trends Genet. 17, 339-345.
24. Thorland, E. C., Myers, S. L., Persing, D. H., Sarkar, G., McGovern, R. M., Gostout, B. S. & Smith, D. I. (2000) Cancer Res. 60, 5916-5921.
25. Thorland, E. C., Myers, S. L., Gostout, B. S. & Smith, D. I. (2003) Oncogene 22, 1225-1237.
26. Simoneau, M., Aboulkassim, T. O., LaRue, H., Rousseau, F. & Fradet, Y. (1999) Oncogene 7, 157-163.
27. di Iasio, M. G., Calin, G. A., Tibiletti, M. G., Vorechovsky, I., Benediktsson, K. P., Taramelli, R., Barbanti-Brodano, G. & Negrini, M. (1999) Oncogene 25, 1635-1638.
28. Wang, S. S., Esplin, E. D., Li, J. L., Huang, L., Gazdar, A., Minna, J. & Evans, G. A. (1998) Science 282, 284-287.
29. Zhao, X., He, M., Wan, D., Ye, Y., He, Y., Han, L., Guo, M., Huang, Y., Qin, W., Wang, M. W., et al. (2003) Cancer Lett. 190, 221-232.
30. Tsuchiya, E., Tanigami, A., Ishikawa, Y., Nishida, K., Hayashi, M., Tokuchi, Y., Hashimoto, T., Okumura, S., Tsuchiya, S. & Nakagawa, K. (2000) Jpn. J. Cancer Res. 91, 589-596.
31. Huebner, K., Garrison, P. N., Barnes, L. D. & Croce, C. M. (1998) Annu. Rev. Genet. 32, 7-31.
32. Zabarovsky, E. R., Lerman, M. I. & Minna, J. D. (2002) Oncogene 21, 6915-6935.
33. Etiemble, J., Moroy, T., Jacquemin, E., Tiollais, P. & Buendia, M. A. (1989) Oncogene 4, 51-57.
34. Sanchez-Izquierdo, D., Buchonnet, G., Siebert, R., Gascoyne, R. D., Climent, J., Karran, L., Marin, M., Blesa, D., Horsman, D., Rosenwald, A., et al. (2003) Blood 101, 4539-4546.
35. Kamath, R. S., Fraser, A. G., Dong, Y., Poulin, G., Durbin, R., Gotta, M., Kanapin, A., Le Bot, N., Moreno, S., Sohrmann, M., et al. (2003) Nature 421, 231-237.
36. Cillo, C., Faiella, A., Cantile, M. & Boncinelli, E. (1999) Exp. Cell Res. 248, 1-9.
37. Owens, B. M. & Hawley, R. G. (2002) Stem Cells 20, 364-379.
38. Pollard, S. L. & Holland, P. W. H. (2000) Curr. Biol. 10, 1059-1062.
39. Michael, M. Z., O'Connor, S. M., van Holst Pellekaan, N. G., Young, G. P. & James, R. J. (2003) Mol. Cancer Res. 1, 882-891.
40. Gauwerky, C. E., Huebner, K., Isobe, M., Nowell, P. C. & Croce, C. M. (1989) Proc. Natl. Acad. Sci. USA 86, 8867-8871.
41. Tam, W. (2001) Gene 274, 157-167.
42. Bomsztyk, K., Van Seuningen, I., Suzuki, H., Denisenko, O. & Ostrowski, J. (1997) FEBS Lett. 400, 113-115.
43. Dejgaard, K., Leffers, H., Rasmussen, H. H., Madsen, P., Kruse, T. A., Gesser, B., Nielsen, H. & Celis, J. E. (1994) J. Mol. Biol. 236, 33-48.
44. Sasaki, T., Shiohama, A., Minoshima, S. & Shimizu, N. (2003) Genomics 82, 323-330.
45. Hutvagner, G. & Zamore, P. D. (2002) Science 297, 2056-2060.
46. Carmell, M. A., ZXuan, Z., Zhang, M. Q. & Hannon, G. J. (2002) Genes Dev. 16, 2733-2742.
47. McManus, M. T. (2003) Semin. Cancer Biol. 13, 253-258.
48. Calin, G. (1994) Oncol. Rep. 1, 987-991.
49. Zhang, Z., Wang, Y., Vikis, H. G., Johnson, L., Liu, G., Li, J., Anderson, M. W., Sills, R. C., Hong, H. L., Devereux, T. R., et al. (2001) Nat. Genet. 29, 25-33.
50. Metzler, M., Wilda, M., Busch, K., Viehmann, S. & Borkhardt, A. (2004) Genes Chromosomes Cancer 39, 167-169,