A small modulatory dsRNA specifies the fate of adult neural stem cells

Cell

Volumn 116, Issue 6, 2004, Pages 779-793

  Kuwabara, Tomoko ^a,b   Hsieh, Jenny ^a   Nakashima, Kinichi ^a,c   Taira, Kazunari ^b   Gage, Fred H ^a  

^a SALK INSTITUTE FOR BIOLOGICAL STUDIES   (United States)

^b NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^c KUMAMOTO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED RNA; TRANSCRIPTION FACTOR;

ANIMAL CELL; ARTICLE; CELL DIFFERENTIATION; GENE EXPRESSION; HIPPOCAMPUS; MOUSE; NERVE CELL; NONHUMAN; PRIORITY JOURNAL; PROTEIN INTERACTION; RNA SEQUENCE; SILENCER ELEMENT; STEM CELL; TRANSCRIPTION REGULATION;

ANIMALIA; EUKARYOTA;

EID: 1642603947     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0092-8674(04)00248-X     Document Type: Article

References (37)

1. Battaglioli E., Andres M.E., Rose D.W., Chenoweth J.G., Rosenfeld M.G., Anderson M.E., Mandel G. REST repression of neuronal genes requires components of the hSWI.SNF complex. J. Biol. Chem. 277:2002;41038-41045.
2. Bernstein E., Caudy A.A., Hammond S.M., Hannon G.J. Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature. 409:2001;363-366.
3. Bannister A.J., Kouzarides T. The CBP co-activator is a histone acetyltransferase. Nature. 384:1996;641-643.
4. Chen Z.F., Paquette A.J., Anderson D.J. NRSF/REST is required in vivo for repression of multiple neuronal target genes during embryogenesis. Nat. Genet. 20:1998;136-142.
5. Chong J.A., Tapia-Ramirez J., Kim S., Toledo-Aral J.J., Zheng Y., Boutros M.C., Altshuller Y.M., Frohman M.A., Kraner S.D., Mandel G. Rest. a mammalian silencer protein that restricts sodium channel gene expression to neurons Cell. 80:1995;949-957.
6. Dostie J., Mourelatos Z., Yang M., Sharma A., Dreyfuss G. Numerous microRNPs in neuronal cells containing novel microRNAs. RNA. 9:2003;180-186.
7. Eckstein F., Lilley D.M.J. Catalytic RNA. Eckstein F., Lilley D.M.J. Nucleic Acids and Molecular Biology. 1996;Springer-Verlag, Berlin.
8. Eddy S.R. Non-coding RNA genes and the modern RNA world. Nat. Rev. Genet. 2:2001;919-929.
9. Finerty P.J. Jr., Bass B.L. Subsets of the zinc finger motifs in dsRBP-ZFa can bind double-stranded RNA. Biochemistry. 38:1999;4001-4007.
10. Fire A., Xu S., Montgomery M.K., Kostas S.A., Driver S.E., Mello C.C. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature. 391:1998;806-811.
11. Gage F.H., Coates P.W., Palmer T.D., Kuhn H.G., Fisher L.J., Suhonen J.O., Peterson D.A., Suhr S.T., Ray J. Survival and differentiation of adult neuronal progenitor cells transplanted to the adult brain. Proc. Natl. Acad. Sci. USA. 92:1995;11879-11883.
12. Hoovers J.M., Mannens M., John R., Bliek J., van Heyningen V., Porteous D.J., Leschot N.J., Westerveld A., Little P.F. High-resolution localization of 69 potential human zinc finger protein genes. a number are clustered Genomics. 12:1992;254-263.
13. Huang Y., Myers S.J., Dingledine R. Transcriptional repression by REST. recruitment of Sin3A and histone deacetylase to neuronal genes Nat. Neurosci. 2:1999;867-872.
14. Hutvagner G., McLachlan J., Pasquinelli A.E., Balint E., Tuschl T., Zamore P.D. A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA. Science. 293:2001;834-838.
15. Kallunki P., Edelman G.M., Jones F.S. The neural restrictive silencer element can act as both a repressor and enhancer of L1 cell adhesion molecule gene expression during postnatal development. Proc. Natl. Acad. Sci. USA. 95:1998;3233-3238.
16. Kempermann G., Gast D., Kronenberg G., Yamaguchi M., Gage G.H. Early determination and long-term persistence of adult-generated new neurons in the hippocampus of mice. Development. 130:2003;391-399.
17. Koseki S., Tanabe T., Tani K., Asano S., Shioda T., Nagai Y., Shimada T., Ohkawa J., Taira K. Factors governing the activity in vivo of ribozymes transcribed by RNA polymerase III. J. Virol. 73:1998;1868-1877.
18. Kraner S.D., Chong J.A., Tsay H.-J., Mandel G. Silencing the type II sodium channel gene. a model for neural-specific gene regulation Neuron. 9:1992;37-44.
19. Kruhlak M.J., Hendzel M.J., Fischle W., Bertos N.R., Hameed S., Yang X.J., Verdin E., Bazett-Jones D.P. Regulation of global acetylation in mitosis through loss of histone acetyltransferases and deacetylases from chromatin. J. Biol. Chem. 276:2001;38307-38319.
20. Lau N.C., Lim L.P., Weinstein E.G., Bartel D.P. An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans. Science. 294:2001;858-862.
21. Lee R.C., Ambros V. An extensive class of small RNAs in Caenorhabditis elegans. Science. 294:2001;862-864.
22. Lee Y., Jeon K., Lee J.T., Kim S., Kim V.N. MicroRNA maturation. stepwise processing and subcellular localization EMBO J. 21:2002;4663-4670.
23. Lunyak V.V., Burgess R., Prefontaine G.G., Nelson C., Sze S.H., Chenoweth J., Schwartz P., Pevzner P.A., Glass C., Mandel G., Rosenfeld M.G. Corepressor-dependent silencing of chromosomal regions encoding neuronal genes. Science. 298:2002;1747-1752.
24. Myers S.J., Peters J., Huang Y., Comer M.B., Barthel F., Dingledine R. Transcriptional regulation of the GluR2 gene. neural-specific expression, multiple promoters, and regulatory elements J. Neurosci. 18:1998;6723-6739.
25. Naruse Y., Aoki T., Kojima T., Mori N. Neural restrictive silencer factor recruits mSin3 and histone deacetylase complex to repress neuron-specific target genes. Proc. Natl. Acad. Sci. USA. 96:1999;13691-13696.
26. Palm K., Belluardo N., Metsis M., Timmusk T. Neuronal expression of zinc finger transcription factor REST/NRSF/XBR gene. J. Neurosci. 18:1998;1280-1296.
27. Pasquinelli A.E. MicroRNAs. deviants no longer Trends Genet. 18:2002;171-173.
28. Pfeifer A., Brandon E.P., Kootstra N., Gage F.H., Verma I.M. Delivery of the Cre recombinase by a self-deleting lentiviral vector. efficient gene targeting in vivo Proc. Natl. Acad. Sci. USA. 98:2001;11450-11455.
29. Schoenherr C.J., Anderson D.J. The neuron-restrictive silencer factor (NRSF). a coordinate repressor of multiple neuron-specific genes Science. 267:1995;1360-1363.
30. Schoenherr C.J., Paquette A.J., Anderson D.J. Identification of potential target genes for the neuron-restrictive silencer factor. Proc. Natl. Acad. Sci. USA. 93:1996;9881-9886.
31. Shimojo M., Lee J.H., Hersh L.B. Role of zinc finger domains of the transcription factor neuron-restrictive silencer factor/repressor element-1 silencing transcription factor in DNA binding and nuclear localization. J. Biol. Chem. 276:2001;13121-13126.
32. 2+ store. Science. 270:1995;1835-1838.
33. Takizawa T., Nakashima K., Namihira M., Ochiai W., Uemura A., Yanagisawa M., Fujita N., Nakao M., Taga T. DNA methylation is a critical cell-intrinsic determinant of astrocyte differentiation in the fetal brain. Dev. Cell. 1:2001;749-758.
34. Tapia-Ramirez J., Eggen B.J., Peral-Rubio M.J., Toledo-Aral J.J., Mandel G. A single zinc finger motif in the silencing factor REST represses the neural-specific type II sodium channel promoter. Proc. Natl. Acad. Sci. USA. 94:1997;1177-1182.
35. Timmusk T., Palm K., Lendahl U., Metsis M. Brain-derived neurotrophic factor expression in vivo under the control of neuron-specific-restrictive silencer element. J. Biol. Chem. 274:1999;1078-1084.
36. van Praag H., Schinder A.F., Christie B.R., Toni N., Palmer T.D., Gage F.H. Functional neurogenesis in the adult hippocampus. Nature. 415:2002;1030-1034.
37. Warashina M., Takagi Y., Stec W.J., Taira K. Differences among mechanisms of ribozyme-catalyzed reactions. Curr. Opin. Biotechnol. 11:2000;354-362.