-
2
-
-
0035807966
-
Dimer formation drives the activation of the cell death protease caspase 9
-
Renatus, M., Stennicke, H. R., Scott, F. L., Liddington, R. C. and Salvesen, G. S. (2001) Dimer formation drives the activation of the cell death protease caspase 9. Proc. Natl. Acad. Sci. U.S.A. 98, 14250-14255
-
(2001)
Proc. Natl. Acad. Sci. U.S.A
, vol.98
, pp. 14250-14255
-
-
Renatus, M.1
Stennicke, H.R.2
Scott, F.L.3
Liddington, R.C.4
Salvesen, G.S.5
-
3
-
-
34147178164
-
Role of proteolysis in caspase-8 activation and stabilization
-
Pop, C., Fitzgerald, P., Green, D. R. and Salvesen, G. S. (2007) Role of proteolysis in caspase-8 activation and stabilization. Biochemistry 46, 4398-4407
-
(2007)
Biochemistry
, vol.46
, pp. 4398-4407
-
-
Pop, C.1
Fitzgerald, P.2
Green, D.R.3
Salvesen, G.S.4
-
4
-
-
0035960678
-
Removal of the pro-domain does not affect the conformation of the procaspase-3 dimer
-
Pop, C., Chen, Y.-R., Smith, B., Bose, K., Bobay, B., Tripathy, A., Franzen, S. and Clark, A. C. (2001) Removal of the pro-domain does not affect the conformation of the procaspase-3 dimer. Biochemistry 40, 14224-14235
-
(2001)
Biochemistry
, vol.40
, pp. 14224-14235
-
-
Pop, C.1
Chen, Y.-R.2
Smith, B.3
Bose, K.4
Bobay, B.5
Tripathy, A.6
Franzen, S.7
Clark, A.C.8
-
5
-
-
0142063422
-
An uncleavable procaspase-3 mutant has a lower catalytic efficiency but an active site similar to that of mature caspase-3
-
Bose, K., Pop, C., Feeney, B. and Clark, A. C. (2003) An uncleavable procaspase-3 mutant has a lower catalytic efficiency but an active site similar to that of mature caspase-3. Biochemistry 42, 12298-12310
-
(2003)
Biochemistry
, vol.42
, pp. 12298-12310
-
-
Bose, K.1
Pop, C.2
Feeney, B.3
Clark, A.C.4
-
6
-
-
40449141956
-
Targeting cell death in tumors by activating caspases
-
MacKenzie, S. H. and Clark, A. C. (2008) Targeting cell death in tumors by activating caspases. Curr. Cancer Drug Targets 8, 98-109
-
(2008)
Curr. Cancer Drug Targets
, vol.8
, pp. 98-109
-
-
MacKenzie, S.H.1
Clark, A.C.2
-
7
-
-
10644282148
-
The protein structures that shape caspase activity, specificity activation and inhibition
-
Fuentes-Prior, P. and Salvesen, G. S. (2004) The protein structures that shape caspase activity, specificity activation and inhibition. Biochem. J. 384, 201-232
-
(2004)
Biochem. J
, vol.384
, pp. 201-232
-
-
Fuentes-Prior, P.1
Salvesen, G.S.2
-
8
-
-
3343011970
-
Caspase activation, inhibition, and reactivation: A mechanistic view
-
Shi, Y. (2004) Caspase activation, inhibition, and reactivation: a mechanistic view. Protein Sci. 13, 1979-1987
-
(2004)
Protein Sci
, vol.13
, pp. 1979-1987
-
-
Shi, Y.1
-
9
-
-
48749120889
-
An allosteric circuit in caspase-1
-
Datta, D., Scheer, J. M., Romanowski, M. J. and Wells, J. A. (2008) An allosteric circuit in caspase-1. J. Mol. Biol. 381, 1157-1167
-
(2008)
J. Mol. Biol
, vol.381
, pp. 1157-1167
-
-
Datta, D.1
Scheer, J.M.2
Romanowski, M.J.3
Wells, J.A.4
-
10
-
-
4344654060
-
Discovery of an allosteric site in the caspases
-
Hardy, J. A., Lam, J., Nguyen, J. T., O'Brien, T. and Wells, J. A. (2004) Discovery of an allosteric site in the caspases. Proc. Natl. Acad. Sci. U.S.A. 101, 12461-12466
-
(2004)
Proc. Natl. Acad. Sci. U.S.A
, vol.101
, pp. 12461-12466
-
-
Hardy, J.A.1
Lam, J.2
Nguyen, J.T.3
O'Brien, T.4
Wells, J.A.5
-
11
-
-
0142063420
-
Mutations in the procaspase-3 dimer interface affect the activity of the zymogen
-
Pop, C., Feeney, B., Tripathy, A. and Clark, A. C. (2003) Mutations in the procaspase-3 dimer interface affect the activity of the zymogen. Biochemistry 42, 12311-12320
-
(2003)
Biochemistry
, vol.42
, pp. 12311-12320
-
-
Pop, C.1
Feeney, B.2
Tripathy, A.3
Clark, A.C.4
-
12
-
-
33745957572
-
Proapoptotic multidomain Bcl-2/Bax-family proteins: Mechanisms, physiological roles, and therapeutic opportunities
-
Reed, J. C. (2006) Proapoptotic multidomain Bcl-2/Bax-family proteins: mechanisms, physiological roles, and therapeutic opportunities. Cell Death Differ. 13, 1378-1386
-
(2006)
Cell Death Differ
, vol.13
, pp. 1378-1386
-
-
Reed, J.C.1
-
13
-
-
4544247638
-
Hodgkin's lymphoma: Biology and treatment strategies for primary, refractory, and relapsed disease
-
Diehl, V., Stein, H., Hummel, M., Zollinger, R. and Connors, J. M. (2003) Hodgkin's lymphoma: biology and treatment strategies for primary, refractory, and relapsed disease. Hematology 2003, 225-247
-
(2003)
Hematology
, vol.2003
, pp. 225-247
-
-
Diehl, V.1
Stein, H.2
Hummel, M.3
Zollinger, R.4
Connors, J.M.5
-
14
-
-
0032211188
-
Caspase 2 and caspase 3 protein levels as predictors of survival in acute myelogenous leukemia
-
Estrov, Z., Thall, P. F., Talpaz, M., Estey, E. H., Kantarjian, H. M., Andreeff, M., Harris, D., Van, Q., Walterscheid, M. and Kornblau, S. M. (1998) Caspase 2 and caspase 3 protein levels as predictors of survival in acute myelogenous leukemia. Blood 92, 3090-3097
-
(1998)
Blood
, vol.92
, pp. 3090-3097
-
-
Estrov, Z.1
Thall, P.F.2
Talpaz, M.3
Estey, E.H.4
Kantarjian, H.M.5
Andreeff, M.6
Harris, D.7
Van, Q.8
Walterscheid, M.9
Kornblau, S.M.10
-
15
-
-
28244432181
-
Expression of apoptosome pathway-related transcripts in non-small cell lung cancer
-
Krepela, E., Prochazka, J., Fiala, P., Zatloukal, P. and Selinger, P. (2006) Expression of apoptosome pathway-related transcripts in non-small cell lung cancer. J. Cancer Res. Clin. Oncol. 132, 57-68
-
(2006)
J. Cancer Res. Clin. Oncol
, vol.132
, pp. 57-68
-
-
Krepela, E.1
Prochazka, J.2
Fiala, P.3
Zatloukal, P.4
Selinger, P.5
-
16
-
-
85078505211
-
Expression of caspase-3 and -7 does not correlate with the extent of apoptosis in primary breast carcinomas
-
Grigoriev, M. Y., Pozharissky, K. M., Hanson, K. P., Imyanitov, E. N. and Zhivotovsky, B. (2002) Expression of caspase-3 and -7 does not correlate with the extent of apoptosis in primary breast carcinomas. Cell Cycle 1, 337-342
-
(2002)
Cell Cycle
, vol.1
, pp. 337-342
-
-
Grigoriev, M.Y.1
Pozharissky, K.M.2
Hanson, K.P.3
Imyanitov, E.N.4
Zhivotovsky, B.5
-
17
-
-
14844323968
-
XIAP inhibits caspase-3 and -7 using two binding sites: Evolutionarily conserved mechanism of IAPs
-
Scott, F. L., Denault, J.-B., Riedl, S. J., Shin, H., Renatus, M. and Salvesen, G. S. (2005) XIAP inhibits caspase-3 and -7 using two binding sites: evolutionarily conserved mechanism of IAPs. EMBO J. 24, 645-655
-
(2005)
EMBO J
, vol.24
, pp. 645-655
-
-
Scott, F.L.1
Denault, J.-B.2
Riedl, S.J.3
Shin, H.4
Renatus, M.5
Salvesen, G.S.6
-
18
-
-
0035818438
-
Mechanism-based inactivation of caspases by the apoptotic suppressor p35
-
Riedl, S. J., Renatus, M., Snipas, S. J. and Salvesen, G. S. (2001) Mechanism-based inactivation of caspases by the apoptotic suppressor p35. Biochemistry 40, 13274-13280
-
(2001)
Biochemistry
, vol.40
, pp. 13274-13280
-
-
Riedl, S.J.1
Renatus, M.2
Snipas, S.J.3
Salvesen, G.S.4
-
19
-
-
0030849093
-
A combinatorial approach defines specificities of members of the caspase family and granzyme
-
Thornberry, N. A., Rano, T. A., Peterson, E. P., Rasper, D. M., Timkey, T., Carcia-Calvo, M., Hotzager, V. M., Nordstrom, P. A., Roy, S., Vaillancourt, J. P. et al. (1997) A combinatorial approach defines specificities of members of the caspase family and granzyme B. J. Biol. Chem. 272, 17907-17911
-
(1997)
B. J. Biol. Chem
, vol.272
, pp. 17907-17911
-
-
Thornberry, N.A.1
Rano, T.A.2
Peterson, E.P.3
Rasper, D.M.4
Timkey, T.5
Carcia-Calvo, M.6
Hotzager, V.M.7
Nordstrom, P.A.8
Roy, S.9
Vaillancourt, J.P.10
-
20
-
-
0034608931
-
Rapid and general profiling of protease specificity by using combinatorial fluorogenic substrate libraries
-
Harris, J. L., Backes, B. J., Leonetti, F., Mahrus, S., Ellman, J. A. and Craik, C. S. (2000) Rapid and general profiling of protease specificity by using combinatorial fluorogenic substrate libraries. Proc. Natl. Acad. Sci. U.S.A. 97, 7754-7759
-
(2000)
Proc. Natl. Acad. Sci. U.S.A
, vol.97
, pp. 7754-7759
-
-
Harris, J.L.1
Backes, B.J.2
Leonetti, F.3
Mahrus, S.4
Ellman, J.A.5
Craik, C.S.6
-
21
-
-
38749124386
-
Activity profiling of human deSUMOylating enzymes (SENPs) with synthetic substrates suggests an unexpected specificity of two newly characterized members of the family
-
Drag, M., Mikolajczyk, J., Krishnakumar, I. M., Huang, Z. and Salvesen, G. S. (2008) Activity profiling of human deSUMOylating enzymes (SENPs) with synthetic substrates suggests an unexpected specificity of two newly characterized members of the family. Biochem. J. 409, 461-469
-
(2008)
Biochem. J
, vol.409
, pp. 461-469
-
-
Drag, M.1
Mikolajczyk, J.2
Krishnakumar, I.M.3
Huang, Z.4
Salvesen, G.S.5
-
22
-
-
33750690511
-
Role of loop bundle hydrogen bonds in the maturation and activity of (pro)caspase-3
-
Feeney, B., Pop, C., Swartz, P., Mattos, C. and Clark, A. C. (2006) Role of loop bundle hydrogen bonds in the maturation and activity of (pro)caspase-3. Biochemistry 45, 13249-13263
-
(2006)
Biochemistry
, vol.45
, pp. 13249-13263
-
-
Feeney, B.1
Pop, C.2
Swartz, P.3
Mattos, C.4
Clark, A.C.5
-
24
-
-
3543012707
-
Crystallography and NMR system: A new software suite for macromolecular structure determination
-
Brunger, A. T., Adams, P. D., Clore, G. M., Delano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Panni, N. S. et al. (1998) Crystallography and NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr. Sect. D Biol. Crystallogr. 54, 905-921
-
(1998)
Acta Crystallogr. Sect. D Biol. Crystallogr
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Panni, N.S.10
-
25
-
-
0032562661
-
Generation of constitutively active recombinant caspases-3 and -6 by rearrangement of their subunits
-
Srinivasula, S. M., Ahmad, M., MacFarlane, M., Luo, Z., Huang, Z., Fernandes-Alnemri, T. and Alnemri, E. S. (1998) Generation of constitutively active recombinant caspases-3 and -6 by rearrangement of their subunits. J. Biol. Chem. 273, 10107-10111
-
(1998)
J. Biol. Chem
, vol.273
, pp. 10107-10111
-
-
Srinivasula, S.M.1
Ahmad, M.2
MacFarlane, M.3
Luo, Z.4
Huang, Z.5
Fernandes-Alnemri, T.6
Alnemri, E.S.7
-
26
-
-
0040298568
-
Caspase-3 is required for DNA fragmentation and morphological changes associated with apoptosis
-
Janicke, R. U., Sprengart, M. L., Wati, M. R. and Porter, A. G. (1998) Caspase-3 is required for DNA fragmentation and morphological changes associated with apoptosis. J. Biol. Chem. 273, 9357-93602
-
(1998)
J. Biol. Chem
, vol.273
, pp. 9357-93602
-
-
Janicke, R.U.1
Sprengart, M.L.2
Wati, M.R.3
Porter, A.G.4
-
27
-
-
39749123276
-
Apoptosis and necrosis: Detection, discrimination and phagocytosis
-
Krysko, D. V., Vanden Berghe, T., D'Herde, K. and Vandenabeele, P. (2008) Apoptosis and necrosis: detection, discrimination and phagocytosis. Methods 44, 205-221
-
(2008)
Methods
, vol.44
, pp. 205-221
-
-
Krysko, D.V.1
Vanden Berghe, T.2
D'Herde, K.3
Vandenabeele, P.4
-
28
-
-
33748941571
-
Systems analysis of effector caspase activation and its control by X-linked inhibitor of apoptosis protein
-
Rehm, M., Huber, H. J., Dussmann, H. and Prehn, J. H. M. (2006) Systems analysis of effector caspase activation and its control by X-linked inhibitor of apoptosis protein. EMBO J. 25, 4338-4349
-
(2006)
EMBO J
, vol.25
, pp. 4338-4349
-
-
Rehm, M.1
Huber, H.J.2
Dussmann, H.3
Prehn, J.H.M.4
-
29
-
-
33749252583
-
Human inhibitor of apoptosis proteins: Why XIAP is the black sheep of the family
-
Eckelman, B. P., Salvesen, G. S. and Scott, F. L. (2006) Human inhibitor of apoptosis proteins: why XIAP is the black sheep of the family. EMBO Rep. 7, 988-994
-
(2006)
EMBO Rep
, vol.7
, pp. 988-994
-
-
Eckelman, B.P.1
Salvesen, G.S.2
Scott, F.L.3
-
30
-
-
15144345497
-
Pro-caspase-3 is a major physiologic target of caspase-8
-
Stennicke, H. R., Jurgensmeier, J. M., Shin, H., Deveraux, Q., Wolf, B. B., Yang, X., Zhou, Q., llerby, M., Ellerby, L. M., Bredesen, D. et al. (1998) Pro-caspase-3 is a major physiologic target of caspase-8. J. Biol. Chem. 273, 27084-27090
-
(1998)
J. Biol. Chem
, vol.273
, pp. 27084-27090
-
-
Stennicke, H.R.1
Jurgensmeier, J.M.2
Shin, H.3
Deveraux, Q.4
Wolf, B.B.5
Yang, X.6
Zhou, Q.7
llerby, M.8
Ellerby, L.M.9
Bredesen, D.10
-
31
-
-
15744396042
-
Interdimer processing and linearity of procaspase-3 activation
-
Liu, H., Chang, D. W. and Yang, X. (2005) Interdimer processing and linearity of procaspase-3 activation. J. Biol. Chem. 280, 11578-11582
-
(2005)
J. Biol. Chem
, vol.280
, pp. 11578-11582
-
-
Liu, H.1
Chang, D.W.2
Yang, X.3
-
32
-
-
41549132691
-
Quantitative analysis of pathways controlling extrinsic apoptosis in single cells
-
Albeck, J. G., Burke, J. M., Aldridge, B. B., Zhang, M., Lauffenburger, D. A. and Sorger, P. K. (2008) Quantitative analysis of pathways controlling extrinsic apoptosis in single cells. Mol. Cell 30, 11-25
-
(2008)
Mol. Cell
, vol.30
, pp. 11-25
-
-
Albeck, J.G.1
Burke, J.M.2
Aldridge, B.B.3
Zhang, M.4
Lauffenburger, D.A.5
Sorger, P.K.6
-
33
-
-
33745260957
-
Extended substrate recognition in caspase-3 revealed by high resolution X-ray structure analysis
-
Ganesan, R., Mittl, P. R. E., Jelakovic, S. and Grutter, M. G. (2006) Extended substrate recognition in caspase-3 revealed by high resolution X-ray structure analysis. J. Mol. Biol. 359, 1378-1388
-
(2006)
J. Mol. Biol
, vol.359
, pp. 1378-1388
-
-
Ganesan, R.1
Mittl, P.R.E.2
Jelakovic, S.3
Grutter, M.G.4
-
34
-
-
10944256201
-
Ionic interactions near loop L4 are important for maintaining the active site environment and the dimer stability of (pro)caspase-3
-
Feeney, B., Pop, C., Tripathy, A. and Clark, A. C. (2004) Ionic interactions near loop L4 are important for maintaining the active site environment and the dimer stability of (pro)caspase-3. Biochem. J. 384, 515-525
-
(2004)
Biochem. J
, vol.384
, pp. 515-525
-
-
Feeney, B.1
Pop, C.2
Tripathy, A.3
Clark, A.C.4
-
35
-
-
0035909889
-
Structural basis for the activation of human procaspase-7
-
Riedl, S. J., Fuentes-Prior, P., Renatus, M., Kairies, N., Krapp, S., Huber, R., Salvesen, G. S. and Bode, W. (2001) Structural basis for the activation of human procaspase-7. Proc. Natl. Acad. Sci. U.S.A. 98, 14790-14795
-
(2001)
Proc. Natl. Acad. Sci. U.S.A
, vol.98
, pp. 14790-14795
-
-
Riedl, S.J.1
Fuentes-Prior, P.2
Renatus, M.3
Kairies, N.4
Krapp, S.5
Huber, R.6
Salvesen, G.S.7
Bode, W.8
-
36
-
-
0035798361
-
Crystal structure of a procaspase-7 zymogen: Mechanisms of activation and substrate binding
-
Chai, J., Wu, Q., Shiozaki, E., Srinivasula, S. M., Alnemri, E. S. and Shi, Y. (2001) Crystal structure of a procaspase-7 zymogen: mechanisms of activation and substrate binding. Cell 107, 399-407
-
(2001)
Cell
, vol.107
, pp. 399-407
-
-
Chai, J.1
Wu, Q.2
Shiozaki, E.3
Srinivasula, S.M.4
Alnemri, E.S.5
Shi, Y.6
-
37
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimization, and dynamics calculations
-
Brooks, B. R., Bruccoleri, R. E., Olafson, B. D., States, D. J., Swaminathan, S. and Karplus, M. (1983) CHARMM: A program for macromolecular energy, minimization, and dynamics calculations. J. Comp. Chem. 4, 187-217
-
(1983)
J. Comp. Chem
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
38
-
-
0034663675
-
Quantification of active caspase 3 in apoptotic cells
-
Saunders, P. A., Cooper, J. A., Roodell, M. M., Schroeder, D. A., Borchert, C. J., Isaacson, A. L., Schendel, M. J., Godfrey, K. G., Cahill, D. R., Walz, A. M. et al. (2000) Quantification of active caspase 3 in apoptotic cells. Anal. Biochem. 284, 114-124
-
(2000)
Anal. Biochem
, vol.284
, pp. 114-124
-
-
Saunders, P.A.1
Cooper, J.A.2
Roodell, M.M.3
Schroeder, D.A.4
Borchert, C.J.5
Isaacson, A.L.6
Schendel, M.J.7
Godfrey, K.G.8
Cahill, D.R.9
Walz, A.M.10
-
39
-
-
0035902601
-
Ubiquitin-protein ligase activity of X-linked inhibitor of apoptosis protein promotes proteasomal degradation of caspase-3 and enhances its anti-apoptotic effect in Fas-induced cell death
-
Suzuki, Y., Nakabayashi, Y. and Takahashi, R. (2001) Ubiquitin-protein ligase activity of X-linked inhibitor of apoptosis protein promotes proteasomal degradation of caspase-3 and enhances its anti-apoptotic effect in Fas-induced cell death. Proc. Natl. Acad. Sci. U.S.A. 98, 8662-8667
-
(2001)
Proc. Natl. Acad. Sci. U.S.A
, vol.98
, pp. 8662-8667
-
-
Suzuki, Y.1
Nakabayashi, Y.2
Takahashi, R.3
-
40
-
-
0035974798
-
Achilles' heel of cancer?
-
Vogelstein, B. and Kinzler, K. W. (2001) Achilles' heel of cancer? Nature 412, 865-866
-
(2001)
Nature
, vol.412
, pp. 865-866
-
-
Vogelstein, B.1
Kinzler, K.W.2
-
41
-
-
1442286330
-
The role of Bcl-2 family members in tumorigenesis
-
Kirkin, V., Joos, S. and Zornig, M. (2004) The role of Bcl-2 family members in tumorigenesis. Biochem. Biophys. Acta 1644, 229-249
-
(2004)
Biochem. Biophys. Acta
, vol.1644
, pp. 229-249
-
-
Kirkin, V.1
Joos, S.2
Zornig, M.3
-
42
-
-
0035843169
-
Inactivation of the apoptosis effector Apaf-1 in malignant melanoma
-
Soengas, M. S., Capodleci, P., Polsky, D., Mora, J., Esteller, M., Opitz-Araya, X., McComble, R., Herman, J. G., Gerald, W. L., Lazebnik, Y. A. et al. (2001) Inactivation of the apoptosis effector Apaf-1 in malignant melanoma. Nature 409, 207-211
-
(2001)
Nature
, vol.409
, pp. 207-211
-
-
Soengas, M.S.1
Capodleci, P.2
Polsky, D.3
Mora, J.4
Esteller, M.5
Opitz-Araya, X.6
McComble, R.7
Herman, J.G.8
Gerald, W.L.9
Lazebnik, Y.A.10
|