-
1
-
-
0036337915
-
A genomic view of alternative splicing
-
Modrek, B. and Lee, C. (2002) A genomic view of alternative splicing. Nat. Genet., 30, 13-19.
-
(2002)
Nat. Genet.
, vol.30
, pp. 13-19
-
-
Modrek, B.1
Lee, C.2
-
2
-
-
33745899048
-
Alternative splicing: new insights from global analyses
-
Blencowe, B.J. (2006) Alternative splicing: new insights from global analyses. Cell, 126, 37-47.
-
(2006)
Cell
, vol.126
, pp. 37-47
-
-
Blencowe, B.J.1
-
3
-
-
38349132539
-
Genome-wide analysis of alternative pre-mRNA splicing
-
Ben-Dov, C., Hartmann, B., Lundgren, J. and Valcárcel, J. (2008) Genome-wide analysis of alternative pre-mRNA splicing. J. Biol. Chem., 283, 1229-1233.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 1229-1233
-
-
Ben-Dov, C.1
Hartmann, B.2
Lundgren, J.3
Valcárcel, J.4
-
4
-
-
33744814686
-
Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms
-
Romero, P.R., Zaidi, S., Fang, Y.Y., Uversky, V.N., Radivojac, P., Oldfield, C.J., Cortese, M.S., Sickmeier, M., LeGall, T., Obradovic, Z. and Dunker, A.K. (2006) Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms. Proc. Natl Acad. Sci. USA, 103, 8390-8395.
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 8390-8395
-
-
Romero, P.R.1
Zaidi, S.2
Fang, Y.Y.3
Uversky, V.N.4
Radivojac, P.5
Oldfield, C.J.6
Cortese, M.S.7
Sickmeier, M.8
LeGall, T.9
Obradovic, Z.10
Dunker, A.K.11
-
5
-
-
21244439380
-
Regulation of apoptosis by alternative pre-mRNA splicing
-
Schwerk, C. and Schulze-Osthoff, K. (2005) Regulation of apoptosis by alternative pre-mRNA splicing. Mol. Cell, 19, 1-13.
-
(2005)
Mol. Cell
, vol.19
, pp. 1-13
-
-
Schwerk, C.1
Schulze-Osthoff, K.2
-
6
-
-
33645833000
-
Unbalanced alternative splicing and its significance in cancer
-
Venables, J.P. (2006) Unbalanced alternative splicing and its significance in cancer. BioEssays, 28, 378-386.
-
(2006)
BioEssays
, vol.28
, pp. 378-386
-
-
Venables, J.P.1
-
7
-
-
33746927884
-
The connection between splicing and cancer
-
Srebrow, A. and Kornblihtt, A.R. (2006) The connection between splicing and cancer. J. Cell Sci., 119, 2635-2641.
-
(2006)
J. Cell Sci.
, vol.119
, pp. 2635-2641
-
-
Srebrow, A.1
Kornblihtt, A.R.2
-
8
-
-
2342418629
-
Rho-family GTPases: it's not only Rac and Rho (and I like it)
-
Wennerberg, K. and Der, C.J. (2004) Rho-family GTPases: it's not only Rac and Rho (and I like it). J. Cell Sci., 117, 1301-1312.
-
(2004)
J. Cell Sci.
, vol.117
, pp. 1301-1312
-
-
Wennerberg, K.1
Der, C.J.2
-
9
-
-
27944479854
-
Rho GTPases: biochemistry and biology
-
Jaffe, A.B. and Hall, A. (2005) Rho GTPases: biochemistry and biology. Annu. Rev. Cell. Dev. Biol., 21, 247-269.
-
(2005)
Annu. Rev. Cell. Dev. Biol.
, vol.21
, pp. 247-269
-
-
Jaffe, A.B.1
Hall, A.2
-
11
-
-
0029914626
-
In vivo evidence that TATA-binding protein/SL1 colocalizes with UBF and RNA polymerase I when rRNA synthesis is either active or inactive
-
Jordan, P., Brazão, R., Boavida, M.G., Gespach, C. and Chastre, E. (1996) In vivo evidence that TATA-binding protein/SL1 colocalizes with UBF and RNA polymerase I when rRNA synthesis is either active or inactive. J. Cell Biol., 133, 225-234.
-
(1996)
J. Cell Biol.
, vol.133
, pp. 225-234
-
-
Jordan, P.1
Brazão, R.2
Boavida, M.G.3
Gespach, C.4
Chastre, E.5
-
12
-
-
0034659739
-
Rac1 in human breast cancer: overexpression, mutation analysis, and characterisation of a new isoform, Rac1b
-
Schnelzer, A., Prechtel, D., Knaus, U., Dehne, K., Gerhard, M., Graeff, H., Harbeck, N., Schmitt, M. and Lengyel, E. (2000) Rac1 in human breast cancer: overexpression, mutation analysis, and characterisation of a new isoform, Rac1b. Oncogene, 19, 3013-3020.
-
(2000)
Oncogene
, vol.19
, pp. 3013-3020
-
-
Schnelzer, A.1
Prechtel, D.2
Knaus, U.3
Dehne, K.4
Gerhard, M.5
Graeff, H.6
Harbeck, N.7
Schmitt, M.8
Lengyel, E.9
-
13
-
-
0034597710
-
Small GTPase Rac1: structure, localisation and expression of the human gene
-
Matos, P., Skaug, J., Marques, B., Beck, S., Veríssimo, F., Gespach, C., Boavida, M.G., Scherer, S.W. and Jordan, P. (2000) Small GTPase Rac1: structure, localisation and expression of the human gene. Biochem. Biophys. Res. Commun., 277, 741-751.
-
(2000)
Biochem. Biophys. Res. Commun.
, vol.277
, pp. 741-751
-
-
Matos, P.1
Skaug, J.2
Marques, B.3
Beck, S.4
Veríssimo, F.5
Gespach, C.6
Boavida, M.G.7
Scherer, S.W.8
Jordan, P.9
-
14
-
-
0347379871
-
Tumor-related alternative-spliced Rac1b is not regulated by Rho-GDI and exhibits selective downstream signaling
-
Matos, P., Collard, J.G. and Jordan, P. (2003) Tumor-related alternative-spliced Rac1b is not regulated by Rho-GDI and exhibits selective downstream signaling. J. Biol. Chem., 278, 50442-50448.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 50442-50448
-
-
Matos, P.1
Collard, J.G.2
Jordan, P.3
-
15
-
-
1042278129
-
Alternative splicing of Rac1 generates Rac1b, a self-activating GTPase
-
Fiegen, D., Haeusler, L.C., Blumenstein, L., Herbrand, U., Dvorsky, R., Vetter, I.R. and Ahmadian, M.R. (2004) Alternative splicing of Rac1 generates Rac1b, a self-activating GTPase. J. Biol. Chem., 279, 4743-4749.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 4743-4749
-
-
Fiegen, D.1
Haeusler, L.C.2
Blumenstein, L.3
Herbrand, U.4
Dvorsky, R.5
Vetter, I.R.6
Ahmadian, M.R.7
-
16
-
-
11244313840
-
Rac1b, a tumor associated, constitutively active Rac1 splice variant, promotes cellular transformation
-
Singh, A., Karnoub, A.E., Palmby, T.R., Lengyel, E., Sondek, J. and Der, J.C. (2004) Rac1b, a tumor associated, constitutively active Rac1 splice variant, promotes cellular transformation. Oncogene, 23, 9369-9380.
-
(2004)
Oncogene
, vol.23
, pp. 9369-9380
-
-
Singh, A.1
Karnoub, A.E.2
Palmby, T.R.3
Lengyel, E.4
Sondek, J.5
Der, J.C.6
-
17
-
-
21844432918
-
Rac1b and reactive oxygen species mediate MMP-3-induced EMT and genomic instability
-
Radisky, D.C., Levy, D.D., Littlepage, L.E., Liu, H., Nelson, C.M., Fata, J.E., Leake, D., Godden, E.L., Albertson, D.G., Nieto, M.A. et al. (2005) Rac1b and reactive oxygen species mediate MMP-3-induced EMT and genomic instability. Nature, 436, 123-127.
-
(2005)
Nature
, vol.436
, pp. 123-127
-
-
Radisky, D.C.1
Levy, D.D.2
Littlepage, L.E.3
Liu, H.4
Nelson, C.M.5
Fata, J.E.6
Leake, D.7
Godden, E.L.8
Albertson, D.G.9
Nieto, M.A.10
-
18
-
-
16244378220
-
Expression of Rac1b stimulates NF-kB-mediated cell survival and G1/S-progression
-
Matos, P. and Jordan, P. (2005) Expression of Rac1b stimulates NF-kB-mediated cell survival and G1/S-progression. Exp. Cell Res., 305, 292-299.
-
(2005)
Exp. Cell Res.
, vol.305
, pp. 292-299
-
-
Matos, P.1
Jordan, P.2
-
19
-
-
33744965194
-
RAC1, but not RAC1B, stimulates RELB-mediated gene transcription in colorectal cancer cells
-
Matos, P. and Jordan, P. (2006) RAC1, but not RAC1B, stimulates RELB-mediated gene transcription in colorectal cancer cells. J. Biol. Chem., 281, 13724-13732.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 13724-13732
-
-
Matos, P.1
Jordan, P.2
-
20
-
-
0032588170
-
NF-kappaB function in growth control: regulation of cyclin D1 expression and G0/G1-to-S-phase transition
-
Hinz, M., Krappmann, D., Eichten, A., Heder, A., Scheidereit, C. and Strauss, M. (1999) NF-kappaB function in growth control: regulation of cyclin D1 expression and G0/G1-to-S-phase transition. Mol. Cell. Biol., 19, 2690-2698.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 2690-2698
-
-
Hinz, M.1
Krappmann, D.2
Eichten, A.3
Heder, A.4
Scheidereit, C.5
Strauss, M.6
-
21
-
-
0032588186
-
NF-kappaB controls cell growth and differentiation through transcriptional regulation of cyclin D1
-
Guttridge, D.C., Albanese, C., Reuther, J.Y., Pestell, R.G. and Baldwin, A.S. Jr (1999) NF-kappaB controls cell growth and differentiation through transcriptional regulation of cyclin D1. Mol. Cell. Biol., 19, 5785-5799.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 5785-5799
-
-
Guttridge, D.C.1
Albanese, C.2
Reuther, J.Y.3
Pestell, R.G.4
Baldwin Jr., A.S.5
-
22
-
-
0031034469
-
Activation of the nuclear factor-kappaB by Rho, CDC42 and Rac-1 proteins
-
Perona, R., Montaner, S., Saniger, L., Sanchez-Perez, I., Bravo, R. and Lacal, J.C. (1997) Activation of the nuclear factor-kappaB by Rho, CDC42 and Rac-1 proteins. Genes Dev., 11, 463-475.
-
(1997)
Genes Dev.
, vol.11
, pp. 463-475
-
-
Perona, R.1
Montaner, S.2
Saniger, L.3
Sanchez-Perez, I.4
Bravo, R.5
Lacal, J.C.6
-
23
-
-
0033520458
-
Integration of Rac-dependent regulation of cyclin D1 transcription through a nuclear factor-kappaB-dependent pathway
-
Joyce, D., Bouzahzah, B., Fu, M., Albanese, C., D'Amico, M., Steer, J., Klein, J.U., Lee, R.J., Segall, J.E., Westwick, J.K. et al. (1999) Integration of Rac-dependent regulation of cyclin D1 transcription through a nuclear factor-kappaB-dependent pathway. J. Biol. Chem., 274, 25245-25249.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 25245-25249
-
-
Joyce, D.1
Bouzahzah, B.2
Fu, M.3
Albanese, C.4
D'Amico, M.5
Steer, J.6
Klein, J.U.7
Lee, R.J.8
Segall, J.E.9
Westwick, J.K.10
-
24
-
-
34047269793
-
Activation of tumor-specific splice variant Rac1b by dishevelled promotes canonical Wnt signaling and decreased adhesion of colorectal cancer cells
-
Esufali, S., Charames, G.S., Pethe, V.V., Buongiorno, P. and Bapat, B. (2007) Activation of tumor-specific splice variant Rac1b by dishevelled promotes canonical Wnt signaling and decreased adhesion of colorectal cancer cells. Cancer Res., 67, 2469-2479.
-
(2007)
Cancer Res.
, vol.67
, pp. 2469-2479
-
-
Esufali, S.1
Charames, G.S.2
Pethe, V.V.3
Buongiorno, P.4
Bapat, B.5
-
25
-
-
51649127581
-
Increased Rac1b expression sustains colorectal tumor cell survival
-
Matos, P. and Jordan, P. (2008) Increased Rac1b expression sustains colorectal tumor cell survival. Mol. Cancer Res., 6, 1178-1184.
-
(2008)
Mol. Cancer Res.
, vol.6
, pp. 1178-1184
-
-
Matos, P.1
Jordan, P.2
-
26
-
-
51249098983
-
B-RafV600E cooperates with alternative spliced Rac1b to sustain colorectal cancer cell survival
-
Matos, P., Oliveira, C., Velho, S., Gonçalves, V., da Costa, L.T., Moyer, M.P., Seruca, R. and Jordan, P. (2008) B-RafV600E cooperates with alternative spliced Rac1b to sustain colorectal cancer cell survival. Gastroenterology, 135, 899-906.
-
(2008)
Gastroenterology
, vol.135
, pp. 899-906
-
-
Matos, P.1
Oliveira, C.2
Velho, S.3
Gonçalves, V.4
da Costa, L.T.5
Moyer, M.P.6
Seruca, R.7
Jordan, P.8
-
27
-
-
0033762534
-
Selection of alternative 5' splice sites: role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1
-
Eperon, I.C., Makarova, O.V., Mayeda, A., Munroe, S.H., Cáceres, J.F., Hayward, D.G. and Krainer, A.R. (2000) Selection of alternative 5' splice sites: role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1. Mol. Cell. Biol., 20, 8303-8318.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 8303-8318
-
-
Eperon, I.C.1
Makarova, O.V.2
Mayeda, A.3
Munroe, S.H.4
Cáceres, J.F.5
Hayward, D.G.6
Krainer, A.R.7
-
28
-
-
0034256020
-
Alternative pre-mRNA splicing: the logic of combinatorial control
-
Smith, C.W. and Valcárcel, J. (2000) Alternative pre-mRNA splicing: the logic of combinatorial control. Trends Biochem. Sci., 25, 381-388.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 381-388
-
-
Smith, C.W.1
Valcárcel, J.2
-
29
-
-
26944489645
-
Building specificity with nonspecific RNA-binding proteins
-
Singh, R. and Valcárcel, J. (2005) Building specificity with nonspecific RNA-binding proteins. Nat. Struct. Mol. Biol., 12, 645-653.
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 645-653
-
-
Singh, R.1
Valcárcel, J.2
-
30
-
-
0032534232
-
Altered expression of heterogenous nuclear ribonucleoproteins and SR factors in human colon adenocarcinomas
-
Ghigna, C., Moroni, M., Porta, C., Riva, S. and Biamonti, G. (1998) Altered expression of heterogenous nuclear ribonucleoproteins and SR factors in human colon adenocarcinomas. Cancer Res., 58, 5818-5824.
-
(1998)
Cancer Res.
, vol.58
, pp. 5818-5824
-
-
Ghigna, C.1
Moroni, M.2
Porta, C.3
Riva, S.4
Biamonti, G.5
-
31
-
-
0033578006
-
Stage-specific changes in SR splicing factors and alternative splicing in mammary tumorigenesis
-
Stickeler, E., Kittrell, F., Medina, D. and Berget, S.M. (1999) Stage-specific changes in SR splicing factors and alternative splicing in mammary tumorigenesis. Oncogene, 18, 3574-3582.
-
(1999)
Oncogene
, vol.18
, pp. 3574-3582
-
-
Stickeler, E.1
Kittrell, F.2
Medina, D.3
Berget, S.M.4
-
32
-
-
7444220147
-
Aberrant and alternative splicing in cancer
-
Venables, J.P. (2004) Aberrant and alternative splicing in cancer. Cancer Res., 64, 7647-7654.
-
(2004)
Cancer Res.
, vol.64
, pp. 7647-7654
-
-
Venables, J.P.1
-
33
-
-
4444272979
-
Cell signaling and the control of pre-mRNA splicing
-
Shin, C. and Manley, J.L. (2004) Cell signaling and the control of pre-mRNA splicing. Nat. Rev. Mol. Cell. Biol., 5, 727-738.
-
(2004)
Nat. Rev. Mol. Cell. Biol.
, vol.5
, pp. 727-738
-
-
Shin, C.1
Manley, J.L.2
-
34
-
-
34548480966
-
Signals, pathways and splicing regulation
-
Blaustein, M., Pelisch, F. and Srebrow, A. (2007) Signals, pathways and splicing regulation. Int. J. Biochem. Cell. Biol., 39, 2031-2048.
-
(2007)
Int. J. Biochem. Cell. Biol.
, vol.39
, pp. 2031-2048
-
-
Blaustein, M.1
Pelisch, F.2
Srebrow, A.3
-
35
-
-
38349085591
-
Regulation of alternative splicing by reversible protein phosphorylation
-
Stamm, S. (2008) Regulation of alternative splicing by reversible protein phosphorylation. J. Biol. Chem., 283, 1223-1227.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 1223-1227
-
-
Stamm, S.1
-
36
-
-
0007570010
-
The MKK(3/6)-p38-signaling cascade alters the subcellular distribution of hnRNP A1 and modulates alternative splicing regulation
-
van der Houven van Oordt, W., Diaz-Meco, M.T., Lozano, J., Krainer, A.R., Moscat, J. and Cáceres, J.F. (2000) The MKK(3/6)-p38-signaling cascade alters the subcellular distribution of hnRNP A1 and modulates alternative splicing regulation. J. Cell Biol., 149, 307-316.
-
(2000)
J. Cell Biol.
, vol.149
, pp. 307-316
-
-
van der Houven van Oordt, W.1
Diaz-Meco, M.T.2
Lozano, J.3
Krainer, A.R.4
Moscat, J.5
Cáceres, J.F.6
-
37
-
-
20244372405
-
Molecular and genetic studies imply Akt-mediated signaling promotes protein kinase C beta II alternative splicing via phosphorylation of serine/arginine-rich splicing factor SRp40
-
Patel, N.A., Kaneko, S., Apostolatos, H.S., Bae, S.S., Watson, J.E., Davidowitz, K., Chappell, D.S., Birnbaum, M.J., Cheng, J.Q. and Cooper, D.R. (2005) Molecular and genetic studies imply Akt-mediated signaling promotes protein kinase C beta II alternative splicing via phosphorylation of serine/arginine-rich splicing factor SRp40. J. Biol. Chem., 280, 14302-14309.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 14302-14309
-
-
Patel, N.A.1
Kaneko, S.2
Apostolatos, H.S.3
Bae, S.S.4
Watson, J.E.5
Davidowitz, K.6
Chappell, D.S.7
Birnbaum, M.J.8
Cheng, J.Q.9
Cooper, D.R.10
-
38
-
-
66449111724
-
Akt2 regulation of Cdc2-like kinases (Clk/Sty), serine/arginine-rich (SR) protein phosphorylation, and insulin-induced alternative splicing of PKCssII mRNA
-
Jiang, K., Patel, N.A., Watson, J.E., Apostolatos, H., Kleiman, E., Hanson, O., Hagiwara, M. and Cooper, D.R. (2008) Akt2 regulation of Cdc2-like kinases (Clk/Sty), serine/arginine-rich (SR) protein phosphorylation, and insulin-induced alternative splicing of PKCssII mRNA. Endocrinology, 150, 2087-2097.
-
(2008)
Endocrinology
, vol.150
, pp. 2087-2097
-
-
Jiang, K.1
Patel, N.A.2
Watson, J.E.3
Apostolatos, H.4
Kleiman, E.5
Hanson, O.6
Hagiwara, M.7
Cooper, D.R.8
-
39
-
-
2442671442
-
Mammary epithelial-mesenchymal interaction regulates fibronectin alternative splicing via phosphatidylinositol 3-kinase
-
Blaustein, M., Pelisch, F., Coso, O.A., Bissell, M.J., Kornblihtt, A.R. and Srebrow, A. (2004) Mammary epithelial-mesenchymal interaction regulates fibronectin alternative splicing via phosphatidylinositol 3-kinase. J. Biol. Chem., 279, 21029-21037.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 21029-21037
-
-
Blaustein, M.1
Pelisch, F.2
Coso, O.A.3
Bissell, M.J.4
Kornblihtt, A.R.5
Srebrow, A.6
-
40
-
-
21044447376
-
Regulation of alternative splicing by PTB and associated factors
-
Spellman, R., Rideau, A., Matlin, A., Gooding, C., Robinson, F., McGlincy, N., Grellscheid, S.N., Southby, J., Wollerton, M. and Smith, C.W. (2005) Regulation of alternative splicing by PTB and associated factors. Biochem. Soc. Trans., 33, 457-460.
-
(2005)
Biochem. Soc. Trans.
, vol.33
, pp. 457-460
-
-
Spellman, R.1
Rideau, A.2
Matlin, A.3
Gooding, C.4
Robinson, F.5
McGlincy, N.6
Grellscheid, S.N.7
Southby, J.8
Wollerton, M.9
Smith, C.W.10
-
41
-
-
0033636996
-
The apoptosis-promoting factor TIA-1 is a regulator of alternative pre-mRNA splicing
-
Förch, P., Puig, O., Kedersha, N., Martínez, C., Granneman, S., Séraphin, B., Anderson, P. and Valcárcel, J. (2000) The apoptosis-promoting factor TIA-1 is a regulator of alternative pre-mRNA splicing. Mol. Cell, 6, 1089-1098.
-
(2000)
Mol. Cell
, vol.6
, pp. 1089-1098
-
-
Förch, P.1
Puig, O.2
Kedersha, N.3
Martínez, C.4
Granneman, S.5
Séraphin, B.6
Anderson, P.7
Valcárcel, J.8
-
42
-
-
0033017499
-
The splicing factors 9G8 and SRp20 transactivate splicing through different and specific enhancers
-
Cavaloc, Y., Bourgeois, C.F., Kister, L. and Stévenin, J. (1999) The splicing factors 9G8 and SRp20 transactivate splicing through different and specific enhancers. RNA, 5, 468-483.
-
(1999)
RNA
, vol.5
, pp. 468-483
-
-
Cavaloc, Y.1
Bourgeois, C.F.2
Kister, L.3
Stévenin, J.4
-
43
-
-
0035025061
-
Splicing factors SRp20 and 9G8 promote the nucleocytoplasmic export of mRNA
-
Huang, Y. and Steitz, J.A. (2001) Splicing factors SRp20 and 9G8 promote the nucleocytoplasmic export of mRNA. Mol. Cell, 7, 899-905.
-
(2001)
Mol. Cell
, vol.7
, pp. 899-905
-
-
Huang, Y.1
Steitz, J.A.2
-
44
-
-
0042242582
-
ESEfinder: a web resource to identify exonic splicing enhancers
-
Cartegni, L., Wang, J., Zhu, Z., Zhang, M.Q. and Krainer, A.R. (2003) ESEfinder: a web resource to identify exonic splicing enhancers. Nucleic Acids Res., 31, 3568-3571.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3568-3571
-
-
Cartegni, L.1
Wang, J.2
Zhu, Z.3
Zhang, M.Q.4
Krainer, A.R.5
-
45
-
-
33644878582
-
ASD: a bioinformatics resource on alternative splicing. (Database issue)
-
Stamm, S., Riethoven, J.J., Le Texier, V., Gopalakrishnan, C., Kumanduri, V., Tang, Y., Barbosa-Morais, N.L. and Thanaraj, T.A. (2006) ASD: a bioinformatics resource on alternative splicing. (Database issue). Nucleic Acids Res., 34, D46-D55.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Stamm, S.1
Riethoven, J.J.2
Le Texier, V.3
Gopalakrishnan, C.4
Kumanduri, V.5
Tang, Y.6
Barbosa-Morais, N.L.7
Thanaraj, T.A.8
-
46
-
-
0037047644
-
Predictive identification of exonic splicing enhancers in human genes
-
Fairbrother, W.G., Yeh, R.F., Sharp, P.A. and Burge, C.B. (2002) Predictive identification of exonic splicing enhancers in human genes. Science, 297, 1007-1013.
-
(2002)
Science
, vol.297
, pp. 1007-1013
-
-
Fairbrother, W.G.1
Yeh, R.F.2
Sharp, P.A.3
Burge, C.B.4
-
47
-
-
10944256767
-
Systematic identification and analysis of exonic splicing silencers
-
Wang, Z., Rolish, M.E., Yeo, G., Tung, V., Mawson, M. and Burge, C.B. (2004) Systematic identification and analysis of exonic splicing silencers. Cell, 119, 831-845.
-
(2004)
Cell
, vol.119
, pp. 831-845
-
-
Wang, Z.1
Rolish, M.E.2
Yeo, G.3
Tung, V.4
Mawson, M.5
Burge, C.B.6
-
48
-
-
33746808398
-
Wnt/beta-catenin signaling in development and disease
-
Clevers, H. (2006) Wnt/beta-catenin signaling in development and disease. Cell, 127, 469-480.
-
(2006)
Cell
, vol.127
, pp. 469-480
-
-
Clevers, H.1
-
49
-
-
57049129377
-
The b-catenin/TCF4 pathway modifies alternative splicing through modulation of SRp20 expression
-
Gonçalves, V., Matos, P. and Jordan, P. (2008) The b-catenin/TCF4 pathway modifies alternative splicing through modulation of SRp20 expression. RNA, 14, 2538-2549.
-
(2008)
RNA
, vol.14
, pp. 2538-2549
-
-
Gonçalves, V.1
Matos, P.2
Jordan, P.3
-
50
-
-
1942469356
-
Comparative analysis detects dependencies among the 5' splice-site positions
-
Carmel, I., Tal, S., Vig, I. and Ast, G. (2004) Comparative analysis detects dependencies among the 5' splice-site positions. RNA, 10, 828-840.
-
(2004)
RNA
, vol.10
, pp. 828-840
-
-
Carmel, I.1
Tal, S.2
Vig, I.3
Ast, G.4
-
51
-
-
0030850812
-
The splicing factor SRp20 modifies splicing of its own mRNA and ASF/SF2 antagonizes this regulation
-
Jumaa, H. and Nielsen, P.J. (1997) The splicing factor SRp20 modifies splicing of its own mRNA and ASF/SF2 antagonizes this regulation. EMBO J., 16, 5077-5085.
-
(1997)
EMBO J.
, vol.16
, pp. 5077-5085
-
-
Jumaa, H.1
Nielsen, P.J.2
-
52
-
-
0027151934
-
Modulation of exon skipping and inclusion by heterogeneous nuclear ribonucleoprotein A1 and pre-mRNA splicing factor SF2/ASF
-
Mayeda, A., Helfman, D.M. and Krainer, A.R. (1993) Modulation of exon skipping and inclusion by heterogeneous nuclear ribonucleoprotein A1 and pre-mRNA splicing factor SF2/ASF. Mol. Cell. Biol., 13, 2993-3001.
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 2993-3001
-
-
Mayeda, A.1
Helfman, D.M.2
Krainer, A.R.3
-
53
-
-
0041856366
-
The CD44 alternative v9 exon contains a splicing enhancer responsive to the SR proteins 9G8, ASF/SF2, and SRp20
-
Galiana-Arnoux, D., Lejeune, F., Gesnel, M.C., Stevenin, J., Breathnach, R. and Del Gatto-Konczak, F. (2003) The CD44 alternative v9 exon contains a splicing enhancer responsive to the SR proteins 9G8, ASF/SF2, and SRp20. J. Biol. Chem., 278, 32943-32953.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 32943-32953
-
-
Galiana-Arnoux, D.1
Lejeune, F.2
Gesnel, M.C.3
Stevenin, J.4
Breathnach, R.5
Del Gatto-Konczak, F.6
-
54
-
-
0031042396
-
Phosphorylation of the ASF/SF2 RS domain affects both protein-protein and protein-RNA interactions and is necessary for splicing
-
Xiao, S.H. and Manley, J.L. (1997) Phosphorylation of the ASF/SF2 RS domain affects both protein-protein and protein-RNA interactions and is necessary for splicing. Genes Dev., 11, 334-344.
-
(1997)
Genes Dev.
, vol.11
, pp. 334-344
-
-
Xiao, S.H.1
Manley, J.L.2
-
55
-
-
27244441805
-
Reversible phosphorylation differentially affects nuclear and cytoplasmic functions of splicing factor 2/alternative splicing factor
-
Sanford, J.R., Ellis, J.D., Cazalla, D. and Cáceres, J.F. (2005) Reversible phosphorylation differentially affects nuclear and cytoplasmic functions of splicing factor 2/alternative splicing factor. Proc. Natl Acad. Sci. USA, 102, 15042-15047.
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 15042-15047
-
-
Sanford, J.R.1
Ellis, J.D.2
Cazalla, D.3
Cáceres, J.F.4
-
56
-
-
28544450763
-
Concerted regulation of nuclear and cytoplasmic activities of SR proteins by AKT
-
Blaustein, M., Pelisch, F., Tanos, T., Muñoz, M.J., Wengier, D., Quadrana, L., Sanford, J.R., Muschietti, J.P., Kornblihtt, A.R., Cáceres, J.F. et al. (2005) Concerted regulation of nuclear and cytoplasmic activities of SR proteins by AKT. Nat. Struct. Mol. Biol., 12, 1037-1044.
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 1037-1044
-
-
Blaustein, M.1
Pelisch, F.2
Tanos, T.3
Muñoz, M.J.4
Wengier, D.5
Quadrana, L.6
Sanford, J.R.7
Muschietti, J.P.8
Kornblihtt, A.R.9
Cáceres, J.F.10
-
57
-
-
21844480906
-
Cross-talk between signaling pathways regulates alternative splicing: a novel role for JNK
-
Pelisch, F., Blaustein, M., Kornblihtt, A.R. and Srebrow, A. (2005) Cross-talk between signaling pathways regulates alternative splicing: a novel role for JNK. J. Biol. Chem., 280, 25461-25469.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 25461-25469
-
-
Pelisch, F.1
Blaustein, M.2
Kornblihtt, A.R.3
Srebrow, A.4
-
58
-
-
0035933893
-
Insulin regulates alternative splicing of protein kinase C beta II through a phosphatidylinositol 3-kinase-dependent pathway involving the nuclear serine/arginine-rich splicing factor, SRp40, in skeletal muscle cells
-
Patel, N.A., Chalfant, C.E., Watson, J.E., Wyatt, J.R., Dean, N.M., Eichler, D.C. and Cooper, D.R. (2001) Insulin regulates alternative splicing of protein kinase C beta II through a phosphatidylinositol 3-kinase-dependent pathway involving the nuclear serine/arginine-rich splicing factor, SRp40, in skeletal muscle cells. J. Biol. Chem., 276, 22648-22654.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 22648-22654
-
-
Patel, N.A.1
Chalfant, C.E.2
Watson, J.E.3
Wyatt, J.R.4
Dean, N.M.5
Eichler, D.C.6
Cooper, D.R.7
-
59
-
-
0028286596
-
A serine kinase regulates intracellular localization of splicing factors in the cell cycle
-
Gui, J.F., Lane, W.S. and Fu, X.D. (1994) A serine kinase regulates intracellular localization of splicing factors in the cell cycle. Nature, 369, 678-682.
-
(1994)
Nature
, vol.369
, pp. 678-682
-
-
Gui, J.F.1
Lane, W.S.2
Fu, X.D.3
-
60
-
-
0028903247
-
An essential role for Rac in Ras transformation
-
Qiu, R.G., Chen, J., Kirn, D., McCormick, F. and Symons, M. (1995) An essential role for Rac in Ras transformation. Nature, 374, 457-459.
-
(1995)
Nature
, vol.374
, pp. 457-459
-
-
Qiu, R.G.1
Chen, J.2
Kirn, D.3
McCormick, F.4
Symons, M.5
-
61
-
-
0030612083
-
Targeting of U2AF65 to sites of active splicing in the nucleus
-
Gama-Carvalho, M., Krauss, R.D., Chiang, L., Valcarcel, J., Green, M.R. and Carmo-Fonseca, M. (1997) Targeting of U2AF65 to sites of active splicing in the nucleus. J. Cell Biol., 137, 975-987.
-
(1997)
J. Cell Biol.
, vol.137
, pp. 975-987
-
-
Gama-Carvalho, M.1
Krauss, R.D.2
Chiang, L.3
Valcarcel, J.4
Green, M.R.5
Carmo-Fonseca, M.6
-
62
-
-
33750053338
-
In vivo requirement of the small subunit of U2AF for recognition of a weak 3' splice site
-
Pacheco, T.R., Coelho, M.B., Desterro, J.M., Mollet, I. and Carmo- Fonseca, M. (2006) In vivo requirement of the small subunit of U2AF for recognition of a weak 3' splice site. Mol. Cell Biol., 26, 8183-8190.
-
(2006)
Mol. Cell Biol.
, vol.26
, pp. 8183-8190
-
-
Pacheco, T.R.1
Coelho, M.B.2
Desterro, J.M.3
Mollet, I.4
Carmo-Fonseca, M.5
-
63
-
-
0034634614
-
Heterogeneous ribonucleoprotein A1 is part of an exon-specific splice-silencing complex controlled by oncogenic signaling pathways
-
Matter, N., Marx, M., Weg-Remers, S., Ponta, H., Herrlich, P. and König, H. (2000) Heterogeneous ribonucleoprotein A1 is part of an exon-specific splice-silencing complex controlled by oncogenic signaling pathways. J. Biol. Chem., 275, 35353-35360.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 35353-35360
-
-
Matter, N.1
Marx, M.2
Weg-Remers, S.3
Ponta, H.4
Herrlich, P.5
König, H.6
-
64
-
-
0038401969
-
Role of the modular domains of SR proteins in subnuclear localization and alternative splicing specificity
-
Cáceres, J.F., Misteli, T., Screaton, G.R., Spector, D.L. and Krainer, A.R. (1997) Role of the modular domains of SR proteins in subnuclear localization and alternative splicing specificity. J. Cell Biol., 138, 225-238.
-
(1997)
J. Cell Biol.
, vol.138
, pp. 225-238
-
-
Cáceres, J.F.1
Misteli, T.2
Screaton, G.R.3
Spector, D.L.4
Krainer, A.R.5
-
65
-
-
0035914390
-
PTEN induces chemosensitivity in PTEN-mutated prostate cancer cells by suppression of Bcl-2 expression
-
Huang, H., Cheville, J.C., Pan, Y., Roche, P.C., Schmidt, L.J. and Tindall, D.J. (2001) PTEN induces chemosensitivity in PTEN-mutated prostate cancer cells by suppression of Bcl-2 expression. J. Biol. Chem., 276, 38830-38836.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 38830-38836
-
-
Huang, H.1
Cheville, J.C.2
Pan, Y.3
Roche, P.C.4
Schmidt, L.J.5
Tindall, D.J.6
-
66
-
-
0029160069
-
Protein kinase B (c-Akt) in phosphatidylinositol-3-OH kinase signal transduction
-
Burgering, B.M. and Coffer, P.J. (1995) Protein kinase B (c-Akt) in phosphatidylinositol-3-OH kinase signal transduction. Nature, 376, 599-602.
-
(1995)
Nature
, vol.376
, pp. 599-602
-
-
Burgering, B.M.1
Coffer, P.J.2
-
67
-
-
0031892538
-
The stress inducer arsenite activates mitogen-activated protein kinases extracellular signal-regulated kinases 1 and 2 via a MAPK kinase 6/p38-dependent pathway
-
Ludwig, S., Hoffmeyer, A., Goebeler, M., Kilian, K., Häfner, H., Neufeld, B., Han, J. and Rapp, U.R. (1998) The stress inducer arsenite activates mitogen-activated protein kinases extracellular signal-regulated kinases 1 and 2 via a MAPK kinase 6/p38-dependent pathway. J. Biol. Chem., 273, 1917-1922.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 1917-1922
-
-
Ludwig, S.1
Hoffmeyer, A.2
Goebeler, M.3
Kilian, K.4
Häfner, H.5
Neufeld, B.6
Han, J.7
Rapp, U.R.8
-
68
-
-
0037119423
-
Constitutive JNK activation in NIH 3T3 fibroblasts induces a partially transformed phenotype
-
Rennefahrt, U.E., Illert, B., Kerkhoff, E., Troppmair, J. and Rapp, U.R. (2002) Constitutive JNK activation in NIH 3T3 fibroblasts induces a partially transformed phenotype. J. Biol. Chem., 277, 29510-29518.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 29510-29518
-
-
Rennefahrt, U.E.1
Illert, B.2
Kerkhoff, E.3
Troppmair, J.4
Rapp, U.R.5
-
69
-
-
0030999645
-
The LIM-only protein Lmo2 is a bridging molecule assembling an erythroid, DNA-binding complex which includes the TAL1, E47, GATA-1 and Ldb1/NLI proteins
-
Wadman, I.A., Osada, H., Grü tz, G.G., Agulnick, A.D., Westphal, H., Forster, A. and Rabbitts, T.H. (1997) The LIM-only protein Lmo2 is a bridging molecule assembling an erythroid, DNA-binding complex which includes the TAL1, E47, GATA-1 and Ldb1/NLI proteins. EMBO J., 16, 3145-3157.
-
(1997)
EMBO J.
, vol.16
, pp. 3145-3157
-
-
Wadman, I.A.1
Osada, H.2
Grü tz, G.G.3
Agulnick, A.D.4
Westphal, H.5
Forster, A.6
Rabbitts, T.H.7
|