-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acid Res. 25:3389-3402.
-
(1997)
Nucleic Acid Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
19044396103
-
Nutritional regulation of vitellogenesis in mosquitoes: Implications for anautogeny
-
Attardo GM, Hansen IA, Raikhel AS. 2005. Nutritional regulation of vitellogenesis in mosquitoes: implications for anautogeny. Insect Biochem Mol Biol. 35:661-675.
-
(2005)
Insect Biochem Mol Biol
, vol.35
, pp. 661-675
-
-
Attardo, G.M.1
Hansen, I.A.2
Raikhel, A.S.3
-
3
-
-
2442677652
-
Genetic signatures of strong recent positive selection at the lactase gene
-
Bersaglieri T, Sabeti PC, Patterson N, Vanderploeg T, Schaffner SF, Drake JA, Rhodes M, Reich DE, Hirschhorn JN. 2004. Genetic signatures of strong recent positive selection at the lactase gene. Am J Hum Genet. 74:1111-1120.
-
(2004)
Am J Hum Genet
, vol.74
, pp. 1111-1120
-
-
Bersaglieri, T.1
Sabeti, P.C.2
Patterson, N.3
Vanderploeg, T.4
Schaffner, S.F.5
Drake, J.A.6
Rhodes, M.7
Reich, D.E.8
Hirschhorn, J.N.9
-
4
-
-
0031586003
-
Prediction of complete gene structures in human genomic DNA
-
Burge C, Karlin S. 1997. Prediction of complete gene structures in human genomic DNA. J Mol Biol. 268:78-94.
-
(1997)
J Mol Biol
, vol.268
, pp. 78-94
-
-
Burge, C.1
Karlin, S.2
-
5
-
-
0028483223
-
Isolation of a trypsin-like serine protease gene family from the sheep blowfly Lucilia cuprina
-
Casu RE, Jarmey JM, Elvin CM, Eisemann CH. 1994. Isolation of a trypsin-like serine protease gene family from the sheep blowfly Lucilia cuprina. Insect Mol Biol. 3:159-170.
-
(1994)
Insect Mol Biol
, vol.3
, pp. 159-170
-
-
Casu, R.E.1
Jarmey, J.M.2
Elvin, C.M.3
Eisemann, C.H.4
-
6
-
-
0042121237
-
Multiple sequence alignment with the Clustal series of programs
-
Chenna R, Sugawara H, Koike T, Lopez R, Gibson TJ, Higgins DG, Thompson JD. 2003. Multiple sequence alignment with the Clustal series of programs. Nucleic Acid Res. 31:3497-3500.
-
(2003)
Nucleic Acid Res
, vol.31
, pp. 3497-3500
-
-
Chenna, R.1
Sugawara, H.2
Koike, T.3
Lopez, R.4
Gibson, T.J.5
Higgins, D.G.6
Thompson, J.D.7
-
8
-
-
22544434906
-
Gene expression patterns associated with blood-feeding in the malaria mosquito Anopheles gambiae
-
Dana AN, Hong YS, Kern MK, Hillenmeyer ME, Harker BW, Lobo NF, Hogan JR, Romans P, Collins FH. 2005. Gene expression patterns associated with blood-feeding in the malaria mosquito Anopheles gambiae. BMC Genomics. 6:5.
-
(2005)
BMC Genomics
, vol.6
, pp. 5
-
-
Dana, A.N.1
Hong, Y.S.2
Kern, M.K.3
Hillenmeyer, M.E.4
Harker, B.W.5
Lobo, N.F.6
Hogan, J.R.7
Romans, P.8
Collins, F.H.9
-
9
-
-
33746851539
-
AngaGEDUCI: Anopheles gambiae gene expression database with integrated comparative algorithms for identifying conserved DNA motifs in promoter sequences
-
Dissanayake SN, Marinotti O, Ribeiro JMC, James AA. 2006. angaGEDUCI: Anopheles gambiae gene expression database with integrated comparative algorithms for identifying conserved DNA motifs in promoter sequences. BMC Genomics. 7:116.
-
(2006)
BMC Genomics
, vol.7
, pp. 116
-
-
Dissanayake, S.N.1
Marinotti, O.2
Ribeiro, J.M.C.3
James, A.A.4
-
10
-
-
0036529479
-
An efficient algorithm for large-scale detection of protein families
-
Enright AJ, Van Dongen S, Ouzounis CA. 2002. An efficient algorithm for large-scale detection of protein families. Nucleic Acids Res. 30:1575-1584.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 1575-1584
-
-
Enright, A.J.1
Van Dongen, S.2
Ouzounis, C.A.3
-
11
-
-
0035118609
-
Serine proteases as mediators of mosquito immune responses
-
Gorman MJ, Paskewitz SM. 2001. Serine proteases as mediators of mosquito immune responses. Insect Biochem Mol Biol. 31:257-262.
-
(2001)
Insect Biochem Mol Biol
, vol.31
, pp. 257-262
-
-
Gorman, M.J.1
Paskewitz, S.M.2
-
12
-
-
0036468861
-
Epidemic dengue/dengue hemorrhagic fever as a public health, social and economic problem in the 21st century
-
Gubler DJ. 2002. Epidemic dengue/dengue hemorrhagic fever as a public health, social and economic problem in the 21st century. Trends Microbiol. 10:100-103.
-
(2002)
Trends Microbiol
, vol.10
, pp. 100-103
-
-
Gubler, D.J.1
-
14
-
-
0037020114
-
The genome sequence of the malaria mosquito Anopheles gambiae
-
Holt RA, Subramanian GM, Halpern A, et al. 2002. The genome sequence of the malaria mosquito Anopheles gambiae. Science. 298:129-149.
-
(2002)
Science
, vol.298
, pp. 129-149
-
-
Holt, R.A.1
Subramanian, G.M.2
Halpern, A.3
-
15
-
-
0031934614
-
New types of clotting factors and defense molecules found in horseshoe crab hemolymph: Their structures and functions
-
Iwanaga S, Kawabata S, Muta T. 1998. New types of clotting factors and defense molecules found in horseshoe crab hemolymph: their structures and functions. J Biochem. 123:1-15.
-
(1998)
J Biochem
, vol.123
, pp. 1-15
-
-
Iwanaga, S.1
Kawabata, S.2
Muta, T.3
-
16
-
-
0034595501
-
Enhanced genome annotation using structural profiles in the program 3D-PSSM
-
Kelley LA, MacCallum RM, Sternberg MJE. 2000. Enhanced genome annotation using structural profiles in the program 3D-PSSM. J Mol Biol. 299:501-522.
-
(2000)
J Mol Biol
, vol.299
, pp. 501-522
-
-
Kelley, L.A.1
MacCallum, R.M.2
Sternberg, M.J.E.3
-
17
-
-
0036066765
-
The role of lineage-specific gene family expansion in the evolution of eukaryotes
-
Lespinet O, Wolf YI, Koonin EV, Aravind L. 2002. The role of lineage-specific gene family expansion in the evolution of eukaryotes. Genome Res. 12:1048-1059.
-
(2002)
Genome Res
, vol.12
, pp. 1048-1059
-
-
Lespinet, O.1
Wolf, Y.I.2
Koonin, E.V.3
Aravind, L.4
-
18
-
-
0033578917
-
Constitutive activation of toll-mediated antifungal defense in serpin-deficient Drosophila
-
Levashina EA, Langley E, Green C, Gubb D, Ashburner M, Hoffmann JA, Reichhart JM. 1999. Constitutive activation of toll-mediated antifungal defense in serpin-deficient Drosophila. Science. 285:1917-1919.
-
(1999)
Science
, vol.285
, pp. 1917-1919
-
-
Levashina, E.A.1
Langley, E.2
Green, C.3
Gubb, D.4
Ashburner, M.5
Hoffmann, J.A.6
Reichhart, J.M.7
-
19
-
-
13444262384
-
CDD: A conserved domain database for protein classification
-
Marchler-Bauer A, Anderson JB, Cherukuri PF, DeWeese-Scott C, Geer LY, Gwadz M, He S, Hurwitz DI, Jackson JD, Ke Z. 2005. CDD: a conserved domain database for protein classification. Nucleic Acids Res. 33:D192-D196.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Marchler-Bauer, A.1
Anderson, J.B.2
Cherukuri, P.F.3
Deweese-Scott, C.4
Geer, L.Y.5
Gwadz, M.6
He, S.7
Hurwitz, D.I.8
Jackson, J.D.9
Ke, Z.10
-
20
-
-
33645107504
-
Genome-wide analysis of gene expression in adult Anopheles gambiae
-
Marinotti O, Calvo E, Nguyen QK, Dissanayake S, Ribeiro JMC, James AA. 2006. Genome-wide analysis of gene expression in adult Anopheles gambiae. Insect Mol Biol. 15:1-12.
-
(2006)
Insect Mol Biol
, vol.15
, pp. 1-12
-
-
Marinotti, O.1
Calvo, E.2
Nguyen, Q.K.3
Dissanayake, S.4
Ribeiro, J.M.C.5
James, A.A.6
-
21
-
-
24044499681
-
Microarray analysis of genes showing variable expression following a blood meal in Anopheles gambiae
-
Marinotti O, Nguyen QK, Calvo E, James AA, Ribeiro JMC. 2005. Microarray analysis of genes showing variable expression following a blood meal in Anopheles gambiae. Insect Mol Biol. 14:365-373.
-
(2005)
Insect Mol Biol
, vol.14
, pp. 365-373
-
-
Marinotti, O.1
Nguyen, Q.K.2
Calvo, E.3
James, A.A.4
Ribeiro, J.M.C.5
-
22
-
-
0029617766
-
Constitutive and blood meal-induced trypsin genes in Anopheles gambiae
-
Muller HM, Catteruccia F, Vizioli J, Dellatorre A, Crisanti A. 1995. Constitutive and blood meal-induced trypsin genes in Anopheles gambiae. Exp Parasitol. 81:371-385.
-
(1995)
Exp Parasitol
, vol.81
, pp. 371-385
-
-
Muller, H.M.1
Catteruccia, F.2
Vizioli, J.3
Dellatorre, A.4
Crisanti, A.5
-
23
-
-
27944477670
-
Concerted and birth-and-death evolution of multigene families
-
Nei M, Rooney AP. 2005. Concerted and birth-and-death evolution of multigene families. Annu Rev Genet. 39:121-152.
-
(2005)
Annu Rev Genet
, vol.39
, pp. 121-152
-
-
Nei, M.1
Rooney, A.P.2
-
24
-
-
34250902354
-
Genome sequence of Aedes aegypti, a major arbovirus vector
-
Nene V, Wortman JR, Lawson D, et al. 2007. Genome sequence of Aedes aegypti, a major arbovirus vector. Science. 316:1718-1723.
-
(2007)
Science
, vol.316
, pp. 1718-1723
-
-
Nene, V.1
Wortman, J.R.2
Lawson, D.3
-
25
-
-
0031972161
-
Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene
-
Nielsen R, Yang Z. 1998. Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene. Genetics. 148:929-936.
-
(1998)
Genetics
, vol.148
, pp. 929-936
-
-
Nielsen, R.1
Yang, Z.2
-
26
-
-
0032885169
-
Genome evolution and the evolution of exon-shuffling-a review
-
Patthy L. 1999. Genome evolution and the evolution of exon-shuffling-a review. Gene. 238:103-114.
-
(1999)
Gene
, vol.238
, pp. 103-114
-
-
Patthy, L.1
-
27
-
-
34748895999
-
Diet and the evolution of human amylase gene copy number variation
-
DOI 10.1038/ng2123, PII NG2123
-
Perry GH, Dominy NJ, Claw KG, Lee AS, Fiegler H, Redon R, Werner J, Villanea FA, Mountain JL, Misra R. 2007. Diet and the evolution of human amylase gene copy number variation. Nat Genet. 39:1256-1260. (Pubitemid 47482688)
-
(2007)
Nature Genetics
, vol.39
, Issue.10
, pp. 1256-1260
-
-
Perry, G.H.1
Dominy, N.J.2
Claw, K.G.3
Lee, A.S.4
Fiegler, H.5
Redon, R.6
Werner, J.7
Villanea, F.A.8
Mountain, J.L.9
Misra, R.10
Carter, N.P.11
Lee, C.12
Stone, A.C.13
-
28
-
-
4444221565
-
UCSF Chimera-a visualization system for exploratory research and analysis
-
Pettersen EF, Goddard TD, Huang CC, Couch GS, Greenblatt DM, Meng EC, Ferrin TE. 2004. UCSF Chimera-a visualization system for exploratory research and analysis. J Comput Chem. 25:1605-1612.
-
(2004)
J Comput Chem
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
30
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol. 4:406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
31
-
-
0028114174
-
Plasmodium: Parasite chitinase and its role in malaria transmission
-
Shahabuddin M, Kaslow DC. 1994. Plasmodium: parasite chitinase and its role in malaria transmission. Exp Parasitol. 79:85-88.
-
(1994)
Exp Parasitol
, vol.79
, pp. 85-88
-
-
Shahabuddin, M.1
Kaslow, D.C.2
-
32
-
-
0034210233
-
A gut-specific serine protease from the malaria vector Anopheles gambiae is downregulated after blood ingestion
-
Shen Z, Edwards MJ, Jacobs-Lorena M. 2000. A gut-specific serine protease from the malaria vector Anopheles gambiae is downregulated after blood ingestion. Insect Mol Biol. 9:223-229.
-
(2000)
Insect Mol Biol
, vol.9
, pp. 223-229
-
-
Shen, Z.1
Edwards, M.J.2
Jacobs-Lorena, M.3
-
33
-
-
34547781750
-
MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
-
Tamura K, Dudley J, Nei M, Kumar S. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol. 24:1596-1599.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
34
-
-
33748795547
-
Two proteases defining a melanization cascade in the immune system of Drosophila
-
Tang H, Kambris Z, Lemaitre B, Hashimoto C. 2006. Two proteases defining a melanization cascade in the immune system of Drosophila. J Biol Chem. 281:28097-28104.
-
(2006)
J Biol Chem
, vol.281
, pp. 28097-28104
-
-
Tang, H.1
Kambris, Z.2
Lemaitre, B.3
Hashimoto, C.4
-
35
-
-
33746771082
-
Adaptive evolution in two large families of ubiquitin-ligase adapters in nematodes and plants
-
Thomas JH. 2006. Adaptive evolution in two large families of ubiquitin-ligase adapters in nematodes and plants. Genome Res. 16:1017-1030.
-
(2006)
Genome Res
, vol.16
, pp. 1017-1030
-
-
Thomas, J.H.1
-
36
-
-
34249736446
-
Rapid birth-death evolution specific to xenobiotic cytochrome P450 genes in vertebrates
-
Thomas JH. 2007. Rapid birth-death evolution specific to xenobiotic cytochrome P450 genes in vertebrates. PLos Genet. 3:e67.
-
(2007)
PLos Genet
, vol.3
-
-
Thomas, J.H.1
-
37
-
-
0031574072
-
The CLUSTAL-X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acid Res. 25:4876-4882.
-
(1997)
Nucleic Acid Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
38
-
-
0034828797
-
Blood digestion in the malaria mosquito Anopheles gambiae: Molecular cloning and biochemical characterization of two inducible chymotrypsins
-
Vizioli J, Catteruccia F, Torre Ad, Reckmann I, Müller H-M. 2001. Blood digestion in the malaria mosquito Anopheles gambiae: Molecular cloning and biochemical characterization of two inducible chymotrypsins. Eur J Biochem. 268:4027-4035.
-
(2001)
Eur J Biochem
, vol.268
, pp. 4027-4035
-
-
Vizioli, J.1
Catteruccia, F.2
Ad, T.3
Reckmann, I.4
Müller, H.-M.5
-
39
-
-
38549103718
-
Trypsin and trypsin-like proteases in the brain: Proteolysis and cellular functions
-
Wang Y, Luo W, Reiser G. 2008. Trypsin and trypsin-like proteases in the brain: Proteolysis and cellular functions. Cell Mol Life Sci. 65:237-252.
-
(2008)
Cell Mol Life Sci
, vol.65
, pp. 237-252
-
-
Wang, Y.1
Luo, W.2
Reiser, G.3
-
40
-
-
34250860637
-
Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes
-
Waterhouse RM, Kriventseva EV, Meister S, Xi Z, Alvarez KS, Bartholomay LC, Barillas-Mury C, Bian G, Blandin S, Christensen BM. 2007. Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes. Science. 316:1738-1743.
-
(2007)
Science
, vol.316
, pp. 1738-1743
-
-
Waterhouse, R.M.1
Kriventseva, E.V.2
Meister, S.3
Xi, Z.4
Alvarez, K.S.5
Bartholomay, L.C.6
Barillas-Mury, C.7
Bian, G.8
Blandin, S.9
Christensen, B.M.10
-
41
-
-
0030683599
-
PAML: A program package for phylogenetic analysis by maximum likelihood
-
Yang Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Bioinformatics. 13:555-556.
-
(1997)
Bioinformatics
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
42
-
-
0033692959
-
Maximum likelihood estimation on large phylogenies and analysis of adaptive evolution in human influenza virus A
-
Yang Z. 2000. Maximum likelihood estimation on large phylogenies and analysis of adaptive evolution in human influenza virus A. J Mol Evol. 51:423-432.
-
(2000)
J Mol Evol
, vol.51
, pp. 423-432
-
-
Yang, Z.1
-
43
-
-
14744275703
-
The power of phylogenetic comparison in revealing protein function
-
Yang Z. 2005. The power of phylogenetic comparison in revealing protein function. Proc Natl Acad Sci USA. 102:3179-3180.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 3179-3180
-
-
Yang, Z.1
-
44
-
-
0036542901
-
Alternative insecticides: An urgent need
-
Zaim M, Guillet P. 2002. Alternative insecticides: an urgent need. Trends Parasitol. 18:161-163.
-
(2002)
Trends Parasitol
, vol.18
, pp. 161-163
-
-
Zaim, M.1
Guillet, P.2
-
45
-
-
0037020194
-
Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster
-
Zdobnov EM, von Mering C, Letunic I, Torrents D, Suyama M, Copley RR, Christophides GK, Thomasova D, Holt RA, Subramanian GM. 2002. Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster. Science. 298:149-159.
-
(2002)
Science
, vol.298
, pp. 149-159
-
-
Zdobnov, E.M.1
Von Mering, C.2
Letunic, I.3
Torrents, D.4
Suyama, M.5
Copley, R.R.6
Christophides, G.K.7
Thomasova, D.8
Holt, R.A.9
Subramanian, G.M.10
-
46
-
-
33745543629
-
Parallel adaptive origins of digestive RNases in Asian and African leaf monkeys
-
Zhang J. 2006. Parallel adaptive origins of digestive RNases in Asian and African leaf monkeys. Nat Genet. 38:819-823.
-
(2006)
Nat Genet
, vol.38
, pp. 819-823
-
-
Zhang, J.1
-
47
-
-
0036544871
-
Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey
-
Zhang J, Zhang Y, Rosenberg HF. 2002. Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey. Nat Genet. 30:411-415.
-
(2002)
Nat Genet
, vol.30
, pp. 411-415
-
-
Zhang, J.1
Zhang, Y.2
Rosenberg, H.F.3
|