메뉴 건너뛰기




Volumn 167, Issue 3, 2009, Pages 252-260

Automatic particle selection from electron micrographs using machine learning techniques

Author keywords

Automatic particle picking; Classification algorithms; Electron Microscopy; Machine learning; Single particles

Indexed keywords

KEYHOLE LIMPET HEMOCYANIN;

EID: 67651054955     PISSN: 10478477     EISSN: 10958657     Source Type: Journal    
DOI: 10.1016/j.jsb.2009.06.011     Document Type: Article
Times cited : (48)

References (36)
  • 4
    • 0347447280 scopus 로고    scopus 로고
    • A two step approach for semi-automated particle selection from low contrast cryo-electron micrographs
    • Hall R.J., and Patwardhan A. A two step approach for semi-automated particle selection from low contrast cryo-electron micrographs. Journal of Structural Biology 145 (2004) 19-28
    • (2004) Journal of Structural Biology , vol.145 , pp. 19-28
    • Hall, R.J.1    Patwardhan, A.2
  • 5
    • 0035528674 scopus 로고    scopus 로고
    • Idiot's bayes - not so stupid after all?
    • Hand D.J., and Yu K. Idiot's bayes - not so stupid after all?. International Statistical Review 69 (2001) 385-399
    • (2001) International Statistical Review , vol.69 , pp. 385-399
    • Hand, D.J.1    Yu, K.2
  • 6
    • 0347447278 scopus 로고    scopus 로고
    • Application of template matching technique to particle detection in electron micrographs
    • Huang Z., and Penczek P.A. Application of template matching technique to particle detection in electron micrographs. Journal of Structural Biology 145 (2004) 29-40
    • (2004) Journal of Structural Biology , vol.145 , pp. 29-40
    • Huang, Z.1    Penczek, P.A.2
  • 9
    • 15444370401 scopus 로고    scopus 로고
    • Automated acquisition of cryo-electron micrographs for single particle reconstruction on a FEI Tecnai electron microscope
    • Lei J., and Frank J. Automated acquisition of cryo-electron micrographs for single particle reconstruction on a FEI Tecnai electron microscope. Journal of Structural Biology 150 (2005) 69-80
    • (2005) Journal of Structural Biology , vol.150 , pp. 69-80
    • Lei, J.1    Frank, J.2
  • 10
    • 0033377664 scopus 로고    scopus 로고
    • EMAN: semiautomated software for high-resolution single-particle reconstructions
    • Ludtke S.J., Baldwin P.R., and Chiu W. EMAN: semiautomated software for high-resolution single-particle reconstructions. Journal of Structural Biology 128 (1999) 82-97
    • (1999) Journal of Structural Biology , vol.128 , pp. 82-97
    • Ludtke, S.J.1    Baldwin, P.R.2    Chiu, W.3
  • 11
    • 0346186104 scopus 로고    scopus 로고
    • Detecting particles in cryo-em micrographs using learned features
    • Mallick S.P., Zhu Y., and Kriegman D. Detecting particles in cryo-em micrographs using learned features. Journal of Structural Biology 145 (2004) 52-62
    • (2004) Journal of Structural Biology , vol.145 , pp. 52-62
    • Mallick, S.P.1    Zhu, Y.2    Kriegman, D.3
  • 12
    • 0347447277 scopus 로고    scopus 로고
    • Automatic particle pickup method using a neural network has high accuracy by applying an initial weight derived from eigenimages: a new reference free method for single-particle analysis
    • Ogura T., and Sato C. Automatic particle pickup method using a neural network has high accuracy by applying an initial weight derived from eigenimages: a new reference free method for single-particle analysis. Journal of Structural Biology 145 (2004) 63-75
    • (2004) Journal of Structural Biology , vol.145 , pp. 63-75
    • Ogura, T.1    Sato, C.2
  • 13
    • 1942456920 scopus 로고    scopus 로고
    • Auto-accumulation method using simulated annealing enables fully automatic particle pickup completely free from a matching template or learning data
    • Ogura T., and Sato C. Auto-accumulation method using simulated annealing enables fully automatic particle pickup completely free from a matching template or learning data. Journal of Structural Biology 146 (2005) 344-358
    • (2005) Journal of Structural Biology , vol.146 , pp. 344-358
    • Ogura, T.1    Sato, C.2
  • 15
    • 85032751446 scopus 로고    scopus 로고
    • Bootstrap-inspired techniques in computational intelligence
    • Polikar R. Bootstrap-inspired techniques in computational intelligence. IEEE Signal Processing Magazine 24 4 (2007) 59-72
    • (2007) IEEE Signal Processing Magazine , vol.24 , Issue.4 , pp. 59-72
    • Polikar, R.1
  • 16
    • 0347985836 scopus 로고    scopus 로고
    • Fast automatic particle picking from cryo-electron micrographs using a locally normalized cross-correlation function: a case study
    • Rath B.K., and Frank J. Fast automatic particle picking from cryo-electron micrographs using a locally normalized cross-correlation function: a case study. Journal of Structural Biology 145 (2004) 84-90
    • (2004) Journal of Structural Biology , vol.145 , pp. 84-90
    • Rath, B.K.1    Frank, J.2
  • 17
    • 0346816491 scopus 로고    scopus 로고
    • Findem - a fast, efficient program for automatic selection of particles from electron micrographs
    • Roseman A.M. Findem - a fast, efficient program for automatic selection of particles from electron micrographs. Journal of Structural Biology 145 (2004) 91-99
    • (2004) Journal of Structural Biology , vol.145 , pp. 91-99
    • Roseman, A.M.1
  • 21
    • 0347355578 scopus 로고    scopus 로고
    • SLEUTH - a fast computer program for automatically detecting particles in electron microscope images
    • Short J.M. SLEUTH - a fast computer program for automatically detecting particles in electron microscope images. Journal of Structural Biology 145 (2004) 100-110
    • (2004) Journal of Structural Biology , vol.145 , pp. 100-110
    • Short, J.M.1
  • 22
    • 0346186102 scopus 로고    scopus 로고
    • Classical detection theory and the cryo-em particle selection problem
    • Sigworth F.J. Classical detection theory and the cryo-em particle selection problem. Journal of Structural Biology 145 (2004) 111-122
    • (2004) Journal of Structural Biology , vol.145 , pp. 111-122
    • Sigworth, F.J.1
  • 23
    • 0347985832 scopus 로고    scopus 로고
    • Image segmentation for automatic particle identification in electron micrographs based on hidden markov random field models and expectation maximization
    • Singh V., Marinescu D.C., and Baker T.S. Image segmentation for automatic particle identification in electron micrographs based on hidden markov random field models and expectation maximization. Journal of Structural Biology 145 (2004) 123-141
    • (2004) Journal of Structural Biology , vol.145 , pp. 123-141
    • Singh, V.1    Marinescu, D.C.2    Baker, T.S.3
  • 26
    • 33644970463 scopus 로고    scopus 로고
    • Improved bayesian image denoising based on wavelets with applications to electron microscopy
    • Sorzano C.O.S., Ortiz E., López M., and Rodrigo J. Improved bayesian image denoising based on wavelets with applications to electron microscopy. Pattern Recognition 39 (2006) 1205-1213
    • (2006) Pattern Recognition , vol.39 , pp. 1205-1213
    • Sorzano, C.O.S.1    Ortiz, E.2    López, M.3    Rodrigo, J.4
  • 29
  • 30
    • 0348077420 scopus 로고    scopus 로고
    • An approach to automated particle picking from electron micrographs based on reduced representation templates
    • Volkmann N. An approach to automated particle picking from electron micrographs based on reduced representation templates. Journal of Structural Biology 145 (2004) 152-156
    • (2004) Journal of Structural Biology , vol.145 , pp. 152-156
    • Volkmann, N.1
  • 32
    • 0347355581 scopus 로고    scopus 로고
    • Detecting circular and rectangular particles based on geometric feature detection in electron micrographs
    • Yu Z., and Bajaj C. Detecting circular and rectangular particles based on geometric feature detection in electron micrographs. Journal of Structural Biology 145 (2004) 168-180
    • (2004) Journal of Structural Biology , vol.145 , pp. 168-180
    • Yu, Z.1    Bajaj, C.2
  • 33
    • 10044283198 scopus 로고    scopus 로고
    • The optimality of naive bayes
    • Barr V., and Markov Z. (Eds), AAAI Press
    • Zhang H. The optimality of naive bayes. In: Barr V., and Markov Z. (Eds). Proceedings of FLAIRS Conference (2004), AAAI Press
    • (2004) Proceedings of FLAIRS Conference
    • Zhang, H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.