메뉴 건너뛰기




Volumn 145, Issue 1-2, 2004, Pages 157-167

Model-based particle picking for cryo-electron microscopy

Author keywords

3D template; Cross correlation; Maximum likelihood; p97 AAA ATPase

Indexed keywords

KEYHOLE LIMPET HEMOCYANIN;

EID: 0348077421     PISSN: 10478477     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jsb.2003.05.001     Document Type: Conference Paper
Times cited : (18)

References (28)
  • 1
    • 0037182924 scopus 로고    scopus 로고
    • The society of proteins
    • Abbott A. The society of proteins. Nature. 417(27, June):2002;894-896.
    • (2002) Nature , vol.417 , Issue.27 JUNE , pp. 894-896
    • Abbott, A.1
  • 2
    • 0029665272 scopus 로고    scopus 로고
    • A model-based approach for determining orientations of biological macromolecules imaged by cryoelectron microscopy
    • Baker T.S., Cheng R.H. A model-based approach for determining orientations of biological macromolecules imaged by cryoelectron microscopy. J. Struct. Biol. 116:1996;120-130.
    • (1996) J. Struct. Biol. , vol.116 , pp. 120-130
    • Baker, T.S.1    Cheng, R.H.2
  • 5
    • 0003922190 scopus 로고    scopus 로고
    • Pattern Classification
    • New york: Wiley
    • Duda R., Hart P., Stork D. Pattern Classification. second ed. 2001;Wiley, New york.
    • (2001) Second Ed.
    • Duda, R.1    Hart, P.2    Stork, D.3
  • 8
    • 0029975088 scopus 로고    scopus 로고
    • SPIDER and WEB: Processing and visualization of images in 3 D electron microscopy and related fields
    • Available from <
    • Frank J., Radermacher M., Penczek P., Zhu J., Li Y., Ladjadj M., Leith A. SPIDER and WEB: processing and visualization of images in 3 D electron microscopy and related fields. J. Struct. Biol. 116:1996;190-199. Available from < http://www.wadsworth.org/spider_doc/spider/docs/>.
    • (1996) J. Struct. Biol. , vol.116 , pp. 190-199
    • Frank, J.1    Radermacher, M.2    Penczek, P.3    Zhu, J.4    Li, Y.5    Ladjadj, M.6    Leith, A.7
  • 11
    • 0033377941 scopus 로고    scopus 로고
    • Review: Electron crystallography: Present excitement, a nod to the past, anticipating the future
    • Glaeser R.M. Review: electron crystallography: present excitement, a nod to the past, anticipating the future. J. Struct. Biol. 128:1999;3-14.
    • (1999) J. Struct. Biol. , vol.128 , pp. 3-14
    • Glaeser, R.M.1
  • 12
    • 0029003107 scopus 로고
    • The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological macromolecules
    • Henderson R. The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological macromolecules. Q. Rev. Biophys. 28:1995;171-193.
    • (1995) Q. Rev. Biophys. , vol.28 , pp. 171-193
    • Henderson, R.1
  • 13
    • 0033787642 scopus 로고    scopus 로고
    • Local average intensity-based method for identifying spherical particles in electron micrographs
    • Kivioja T., Ravantti J., Berkhovsky A., Ukkonen E., Bamford D. Local average intensity-based method for identifying spherical particles in electron micrographs. J. Struct. Biol. 131:2000;126-134.
    • (2000) J. Struct. Biol. , vol.131 , pp. 126-134
    • Kivioja, T.1    Ravantti, J.2    Berkhovsky, A.3    Ukkonen, E.4    Bamford, D.5
  • 14
    • 0029311289 scopus 로고
    • Automatic particle picking from electron micrographs
    • Lata K.R., Penczek P., Frank J. Automatic particle picking from electron micrographs. Ultramicroscopy. 58:1995;381-391.
    • (1995) Ultramicroscopy , vol.58 , pp. 381-391
    • Lata, K.R.1    Penczek, P.2    Frank, J.3
  • 15
    • 0033377664 scopus 로고    scopus 로고
    • EMAN: Semiautomated software for high-resolution single-particle reconstructions
    • Ludtke S.J., Baldwin P.R., Chiu W. EMAN: semiautomated software for high-resolution single-particle reconstructions. J. Struct. Biol. 128:1999;82-97.
    • (1999) J. Struct. Biol. , vol.128 , pp. 82-97
    • Ludtke, S.J.1    Baldwin, P.R.2    Chiu, W.3
  • 16
    • 0035783159 scopus 로고    scopus 로고
    • Review: Automatic particle detection in electron microscopy
    • Available from <
    • Nicholson W.V., Glaeser R.M. Review: automatic particle detection in electron microscopy. J. Struct. Biol. 133:2001;90-101. Available from < http://www.lbl.gov/Publications/LDRD/2000/LSD.html>.
    • (2001) J. Struct. Biol. , vol.133 , pp. 90-101
    • Nicholson, W.V.1    Glaeser, R.M.2
  • 17
    • 0031583477 scopus 로고    scopus 로고
    • Structure of keyhole limpet hemocyanin type 1 (KLH1) at 15 Å resolution by electron cryomicroscopy and angular reconstitution
    • Orlova E.V., Dube P., Harris J.R., Beckman E., Zemlin F., Markl J. Structure of keyhole limpet hemocyanin type 1 (KLH1) at 15 Å resolution by electron cryomicroscopy and angular reconstitution. J. Mol. Biol. 271:1997;417-437.
    • (1997) J. Mol. Biol. , vol.271 , pp. 417-437
    • Orlova, E.V.1    Dube, P.2    Harris, J.R.3    Beckman, E.4    Zemlin, F.5    Markl, J.6
  • 18
    • 0037375602 scopus 로고    scopus 로고
    • Particle finding in electron micrographs using a fast local correlation algorithm
    • Roseman A.M. Particle finding in electron micrographs using a fast local correlation algorithm. Ultramicroscopy. 94:2003;225-236.
    • (2003) Ultramicroscopy , vol.94 , pp. 225-236
    • Roseman, A.M.1
  • 22
    • 0346186102 scopus 로고    scopus 로고
    • Classical detection theory and the cryo-EM particle selection problem
    • Sigworth F.J. Classical detection theory and the cryo-EM particle selection problem. J. Struct. Biol. 145:2004;111-122.
    • (2004) J. Struct. Biol. , vol.145 , pp. 111-122
    • Sigworth, F.J.1
  • 23
    • 0031038438 scopus 로고    scopus 로고
    • Automated detection of macromolecules from electron micrographs using advanced filter techniques
    • Stoschek A., Hegerl R. Automated detection of macromolecules from electron micrographs using advanced filter techniques. J. Microsc. 185:1997;76-94.
    • (1997) J. Microsc. , vol.185 , pp. 76-94
    • Stoschek, A.1    Hegerl, R.2
  • 24
    • 0001049902 scopus 로고
    • Automatic detection of spherical particles in spot-scan electron cryomicroscopy images
    • Thuman-Commike P., Chi W. Automatic detection of spherical particles in spot-scan electron cryomicroscopy images. J. Microsc. Soc. Am. 1:1995;181-201.
    • (1995) J. Microsc. Soc. Am. , vol.1 , pp. 181-201
    • Thuman-Commike, P.1    Chi, W.2
  • 26
    • 0020014750 scopus 로고
    • Detection of objects in quantum noise limited images
    • van Heel M. Detection of objects in quantum noise limited images. Ultramicroscopy. 8:1982;331-342.
    • (1982) Ultramicroscopy , vol.8 , pp. 331-342
    • Van Heel, M.1
  • 27
    • 0035783362 scopus 로고    scopus 로고
    • Automated identification of filaments in cryo-electron microscopy images
    • Zhu Y., Carragher B., Kriegman D., Potter C.S. Automated identification of filaments in cryo-electron microscopy images. J. Struct. Biol. 135:2001;302-312.
    • (2001) J. Struct. Biol. , vol.135 , pp. 302-312
    • Zhu, Y.1    Carragher, B.2    Kriegman, D.3    Potter, C.S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.