메뉴 건너뛰기




Volumn 9, Issue 1, 2009, Pages

Temporal pattern of loss/persistence of duplicate genes involved in signal transduction and metabolic pathways after teleost-specific genome duplication

Author keywords

[No Author keywords available]

Indexed keywords

ADENYLATE CYCLASE; CALCIUM CALMODULIN DEPENDENT PROTEIN KINASE; CHLORIDE CHANNEL; CYCLIC AMP; CYCLIC AMP DEPENDENT PROTEIN KINASE; GUANINE NUCLEOTIDE BINDING PROTEIN; INOSITOL 1,4,5 TRISPHOSPHATE RECEPTOR; ION CHANNEL; PHOSPHODIESTERASE I; PHOSPHOLIPASE C BETA; PHOSPHOPROTEIN PHOSPHATASE; PROTEIN KINASE; TRICARBOXYLIC ACID;

EID: 67649807765     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-9-127     Document Type: Article
Times cited : (55)

References (70)
  • 1
    • 3142732892 scopus 로고    scopus 로고
    • Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution
    • 10.1105/tpc.021410 15208398
    • Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution. G Blanc KH Wolfe, Plant Cell 2004 16 1679 1691 10.1105/tpc.021410 15208398
    • (2004) Plant Cell , vol.16 , pp. 1679-1691
    • Blanc, G.1    Wolfe, K.H.2
  • 2
    • 1942452749 scopus 로고    scopus 로고
    • Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae
    • 10.1038/nature02424 15004568
    • Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae. M Kellis BW Birren ES Lander, Nature 2004 428 617 624 10.1038/nature02424 15004568
    • (2004) Nature , vol.428 , pp. 617-624
    • Kellis, M.1    Birren, B.W.2    Lander, E.S.3
  • 3
    • 14744277777 scopus 로고    scopus 로고
    • Polyploidy and genome evolution in plants
    • 10.1016/j.pbi.2005.01.001 15752992
    • Polyploidy and genome evolution in plants. KL Adams JF Wendel, Curr Opin Plant Biol 2005 8 135 141 10.1016/j.pbi.2005.01.001 15752992
    • (2005) Curr Opin Plant Biol , vol.8 , pp. 135-141
    • Adams, K.L.1    Wendel, J.F.2
  • 4
    • 26444603772 scopus 로고    scopus 로고
    • Two rounds of whole genome duplication in the ancestral vertebrate
    • 10.1371/journal.pbio.0030314 16128622
    • Two rounds of whole genome duplication in the ancestral vertebrate. P Dehal JL Boore, PLoS Biol 2005 3 e314 10.1371/journal.pbio.0030314 16128622
    • (2005) PLoS Biol , vol.3 , pp. 314
    • Dehal, P.1    Boore, J.L.2
  • 5
    • 24644486449 scopus 로고    scopus 로고
    • Timing and mechanism of ancient vertebrate genome duplications the adventure of a hypothesis
    • 10.1016/j.tig.2005.08.004 16099069
    • Timing and mechanism of ancient vertebrate genome duplications the adventure of a hypothesis. G Panopoulou AJ Poustka, Trends Genet 2005 21 559 567 10.1016/j.tig.2005.08.004 16099069
    • (2005) Trends Genet , vol.21 , pp. 559-567
    • Panopoulou, G.1    Poustka, A.J.2
  • 6
    • 33746894220 scopus 로고    scopus 로고
    • Fish genomes, comparative genomics and vertebrate evolution
    • 10.2174/138920206776389766
    • Fish genomes, comparative genomics and vertebrate evolution. A Froschauer I Braasch JN Volff, Curr Genomics 2006 7 43 57 http://www.ingentaconnect.com/ content/ben/cg/2006/00000007/00000001/art00005 10.2174/138920206776389766
    • (2006) Curr Genomics , vol.7 , pp. 43-57
    • Froschauer, A.1    Braasch, I.2    Volff, J.N.3
  • 8
    • 0032893932 scopus 로고    scopus 로고
    • Preservation of duplicate genes by complementary, degenerative mutations
    • Preservation of duplicate genes by complementary, degenerative mutations. A Force M Lynch FB Pickett A Amores YL Yan J Postlethwait, Genetics 1999 151 1531 1545 10101175 (Pubitemid 29177561)
    • (1999) Genetics , vol.151 , Issue.4 , pp. 1531-1545
    • Force, A.1    Lynch, M.2    Pickett, F.B.3    Amores, A.4    Yan, Y.-L.5    Postlethwait, J.6
  • 9
    • 0027284770 scopus 로고
    • Evolution of the vertebrate genome as reflected in paralogous chromosomal regions in man and the house mouse
    • 10.1006/geno.1993.1133 8486346
    • Evolution of the vertebrate genome as reflected in paralogous chromosomal regions in man and the house mouse. LG Lundin, Genomics 1993 16 1 19 10.1006/geno.1993.1133 8486346
    • (1993) Genomics , vol.16 , pp. 1-19
    • Lundin, L.G.1
  • 12
    • 0037351989 scopus 로고    scopus 로고
    • Genome duplication, a trait shared by 22000 species of ray-finned fish
    • 10.1101/gr.640303 12618368
    • Genome duplication, a trait shared by 22000 species of ray-finned fish. JS Taylor I Braasch T Frickey A Meyer Y Van de Peer, Genome Res 2003 13 382 390 10.1101/gr.640303 12618368
    • (2003) Genome Res , vol.13 , pp. 382-390
    • Taylor, J.S.1    Braasch, I.2    Frickey, T.3    Meyer, A.4    De, P.Y.V.5
  • 13
    • 0036578891 scopus 로고    scopus 로고
    • Evidence of en bloc duplication in vertebrate genomes
    • 10.1038/ng855 11967531
    • Evidence of en bloc duplication in vertebrate genomes. L Abi-Rached A Gilles T Shiina P Pontarotti H Inoko, Nat Genet 2002 31 100 105 10.1038/ng855 11967531
    • (2002) Nat Genet , vol.31 , pp. 100-105
    • Abi-Rached, L.1    Gilles, A.2    Shiina, T.3    Pontarotti, P.4    Inoko, H.5
  • 14
    • 0038817812 scopus 로고    scopus 로고
    • New evidence for genome-wide duplications at the origin of vertebrates using an amphioxus gene set and completed animal genomes
    • 10.1101/gr.874803 12799346
    • New evidence for genome-wide duplications at the origin of vertebrates using an amphioxus gene set and completed animal genomes. G Panopoulou S Hennig D Groth A Krause AJ Poustka R Herwig M Vingron H Lehrach, Genome Res 2003 13 1056 1066 10.1101/gr.874803 12799346
    • (2003) Genome Res , vol.13 , pp. 1056-1066
    • Panopoulou, G.1    Hennig, S.2    Groth, D.3    Krause, A.4    Poustka, A.J.5    Herwig, R.6    Vingron, M.7    Lehrach, H.8
  • 15
    • 2442707716 scopus 로고    scopus 로고
    • Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes
    • 10.1093/molbev/msh114 15014147
    • Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes. A Christoffels EG Koh JM Chia S Brenner S Aparicio B Venkatesh, Mol Biol Evol 2004 21 1146 1151 10.1093/molbev/msh114 15014147
    • (2004) Mol Biol Evol , vol.21 , pp. 1146-1151
    • Christoffels, A.1    Koh, E.G.2    Chia, J.M.3    Brenner, S.4    Aparicio, S.5    Venkatesh, B.6
  • 17
    • 1242274629 scopus 로고    scopus 로고
    • Major events in the genome evolution of vertebrates: Paranome age and size differ considerably between ray-finned fishes and land vertebrates
    • 10.1073/pnas.0307968100 14757817
    • Major events in the genome evolution of vertebrates: paranome age and size differ considerably between ray-finned fishes and land vertebrates. K Vandepoele W De Vos JS Taylor A Meyer Y Van de Peer, Proc Natl Acad Sci USA 2004 101 1638 1643 10.1073/pnas.0307968100 14757817
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 1638-1643
    • Vandepoele, K.1    De Vos, W.2    Taylor, J.S.3    Meyer, A.4    De, P.Y.V.5
  • 18
    • 22144452139 scopus 로고    scopus 로고
    • Hox clusters as models for vertebrate genome evolution
    • 10.1016/j.tig.2005.06.004 15967537
    • Hox clusters as models for vertebrate genome evolution. S Hoegg A Meyer, Trends Genet 2005 21 421 424 10.1016/j.tig.2005.06.004 15967537
    • (2005) Trends Genet , vol.21 , pp. 421-424
    • Hoegg, S.1    Meyer, A.2
  • 19
    • 33644553076 scopus 로고    scopus 로고
    • Tetraodon genome analysis provides further evidence for whole-genome duplication in the ray-finned fish lineage
    • DOI 10.1016/j.cbd.2005.06.001, PII S1744117X05000031
    • Tetraodon genome analysis provides further evidence for whole-genome duplication in the ray-finned fish. Comp. A Christoffels S Brenner B Venkatesh, Biochem Physiol Part D Genomics Proteomics 2006 1 13 19 10.1016/j.cbd.2005.06. 001 (Pubitemid 43292921)
    • (2005) Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics , vol.1 , Issue.1 SPEC. ISS. , pp. 13-19
    • Christoffels, A.1    Brenner, S.2    Venkatesh, B.3
  • 23
    • 0035344021 scopus 로고    scopus 로고
    • Yesterday's polyploids and the mystery of diploidization
    • 10.1038/35072009 11331899
    • Yesterday's polyploids and the mystery of diploidization. KH Wolfe, Nat Rev Genet 2001 2 333 341 10.1038/35072009 11331899
    • (2001) Nat Rev Genet , vol.2 , pp. 333-341
    • Wolfe, K.H.1
  • 25
    • 4143134848 scopus 로고    scopus 로고
    • Phylogenetic timing of the fish-specific genome duplication correlates with the diversification of teleost fish
    • 10.1007/s00239-004-2613-z 15486693
    • Phylogenetic timing of the fish-specific genome duplication correlates with the diversification of teleost fish. S Hoegg H Brinkmann JS Taylor A Meyer, J Mol Evol 2004 59 190 203 10.1007/s00239-004-2613-z 15486693
    • (2004) J Mol Evol , vol.59 , pp. 190-203
    • Hoegg, S.1    Brinkmann, H.2    Taylor, J.S.3    Meyer, A.4
  • 26
    • 38049150292 scopus 로고    scopus 로고
    • Post-duplication charge evolution of phosphoglucose isomerases in teleost fishes through weak selection on many amino acid sites
    • 10.1186/1471-2148-7-204 17963532
    • Post-duplication charge evolution of phosphoglucose isomerases in teleost fishes through weak selection on many amino acid sites. Y Sato M Nishida, BMC Evol Biol 2007 7 204 10.1186/1471-2148-7-204 17963532
    • (2007) BMC Evol Biol , vol.7 , pp. 204
    • Sato, Y.1    Nishida, M.2
  • 28
    • 12244307474 scopus 로고    scopus 로고
    • Basal actinopterygian relationships: A mitogenomic perspective on the phylogeny of the "ancient fish"
    • 10.1016/S1055-7903(02)00331-7 12470943
    • Basal actinopterygian relationships: a mitogenomic perspective on the phylogeny of the "ancient fish". JG Inoue M Miya K Tsukamoto M Nishida, Mol Phylogenet Evol 2003 26 110 120 10.1016/S1055-7903(02)00331-7 12470943
    • (2003) Mol Phylogenet Evol , vol.26 , pp. 110-120
    • Inoue, J.G.1    Miya, M.2    Tsukamoto, K.3    Nishida, M.4
  • 29
    • 17044393500 scopus 로고    scopus 로고
    • The mitochondrial genome of Indonesian coelacanth Latimeria menadoensis (Sarcopterygii: Coelacanthiformes) and divergence time estimation between the two coelacanths
    • 10.1016/j.gene.2005.01.008 15777665
    • The mitochondrial genome of Indonesian coelacanth Latimeria menadoensis (Sarcopterygii: Coelacanthiformes) and divergence time estimation between the two coelacanths. JG Inoue M Miya B Venkatesh M Nishida, Gene 2005 349 227 235 10.1016/j.gene.2005.01.008 15777665
    • (2005) Gene , vol.349 , pp. 227-235
    • Inoue, J.G.1    Miya, M.2    Venkatesh, B.3    Nishida, M.4
  • 30
    • 25144447559 scopus 로고    scopus 로고
    • Molecular systematics of the gonorynchiform fishes (Teleostei) based on whole mitogenome sequences: Implications for higher-level relationships within the Otocephala
    • 10.1016/j.ympev.2005.03.024 15890536
    • Molecular systematics of the gonorynchiform fishes (Teleostei) based on whole mitogenome sequences: Implications for higher-level relationships within the Otocephala. S Lavoué M Miya JG Inoue K Saitoh NB Ishiguro M Nishida, Mol Phylogenet Evol 2005 37 165 177 10.1016/j.ympev.2005.03.024 15890536
    • (2005) Mol Phylogenet Evol , vol.37 , pp. 165-177
    • Lavoué, S.1    Miya, M.2    Inoue, J.G.3    Saitoh, K.4    Ishiguro, N.B.5    Nishida, M.6
  • 31
    • 22044450491 scopus 로고    scopus 로고
    • The phylogenetic position of toadfishes (order Batrachoidiformes) in the higher ray-finned fish as inferred from partitioned Bayesian analysis of 102 whole mitochondrial genome sequences
    • 10.1111/j.1095-8312.2005.00483.x
    • The phylogenetic position of toadfishes (order Batrachoidiformes) in the higher ray-finned fish as inferred from partitioned Bayesian analysis of 102 whole mitochondrial genome sequences. M Miya TP Satoh M Nishida, Biol J Linn Soc Lond 2005 85 289 306 10.1111/j.1095-8312.2005.00483.x
    • (2005) Biol J Linn Soc Lond , vol.85 , pp. 289-306
    • Miya, M.1    Satoh, T.P.2    Nishida, M.3
  • 32
    • 33645772189 scopus 로고    scopus 로고
    • The mitochondrial genome of spotted green pufferfish Tetraodon nigroviridis (Teleostei: Tetraodontiformes) and divergence time estimation among model organisms in fishes
    • 10.1266/ggs.81.29 16607039
    • The mitochondrial genome of spotted green pufferfish Tetraodon nigroviridis (Teleostei: Tetraodontiformes) and divergence time estimation among model organisms in fishes. Y Yamanoue M Miya JG Inoue K Matsuura M Nishida, Genes Genet Syst 2006 81 29 39 10.1266/ggs.81.29 16607039
    • (2006) Genes Genet Syst , vol.81 , pp. 29-39
    • Yamanoue, Y.1    Miya, M.2    Inoue, J.G.3    Matsuura, K.4    Nishida, M.5
  • 33
    • 49249122999 scopus 로고    scopus 로고
    • Mitogenomic evaluation of the historical biogeography of cichlids toward reliable dating of teleostean divergences
    • 10.1186/1471-2148-8-215 18651942
    • Mitogenomic evaluation of the historical biogeography of cichlids toward reliable dating of teleostean divergences. Y Azuma Y Kumazawa M Miya Mabuchi K M Nishida, BMC Evol Biol 2008 8 215 10.1186/1471-2148-8-215 18651942
    • (2008) BMC Evol Biol , vol.8 , pp. 215
    • Azuma, Y.1    Kumazawa, Y.2    Miya, M.3    Mabuchi, K.4    Nishida, M.5
  • 34
    • 34548732734 scopus 로고    scopus 로고
    • Phylogenomic analyses of KCNA clusters in vertebrates: Why do some clusters stay intact?
    • 10.1186/1471-2148-7-139 17697377
    • Phylogenomic analyses of KCNA clusters in vertebrates: why do some clusters stay intact? S Hoegg A Meyer, BMC Evol Biol 2007 7 139 10.1186/1471-2148-7-139 17697377
    • (2007) BMC Evol Biol , vol.7 , pp. 139
    • Hoegg, S.1    Meyer, A.2
  • 35
    • 34247120219 scopus 로고    scopus 로고
    • Sequencing and comparative analysis of fugu protocadherin clusters reveal diversity of protocadherin genes among teleosts
    • 10.1186/1471-2148-7-49 17394664
    • Sequencing and comparative analysis of fugu protocadherin clusters reveal diversity of protocadherin genes among teleosts. WP Yu K Yew V Rajasegaran B Venkatesh, BMC Evol Biol 2007 7 49 10.1186/1471-2148-7-49 17394664
    • (2007) BMC Evol Biol , vol.7 , pp. 49
    • Yu, W.P.1    Yew, K.2    Rajasegaran, V.3    Venkatesh, B.4
  • 37
    • 33745067419 scopus 로고    scopus 로고
    • The gain and loss of genes during 600 million years of vertebrate evolution
    • 10.1186/gb-2006-7-5-r43 16723033
    • The gain and loss of genes during 600 million years of vertebrate evolution. T Blomme K Vandepoele S De Bodt C Simillion S Maere Y Van de Peer, Genome Biol 2006 7 R43 10.1186/gb-2006-7-5-r43 16723033
    • (2006) Genome Biol , vol.7 , pp. 43
    • Blomme, T.1    Vandepoele, K.2    De Bodt, S.3    Simillion, C.4    Maere, S.5    De, P.Y.V.6
  • 40
  • 42
    • 0033972072 scopus 로고    scopus 로고
    • The probability of duplicate gene preservation by subfunctionalization
    • The probability of duplicate gene preservation by subfunctionalization. M Lynch A Force, Genetics 2000 154 459 473 10629003 (Pubitemid 30045935)
    • (2000) Genetics , vol.154 , Issue.1 , pp. 459-473
    • Lynch, M.1    Force, A.2
  • 43
    • 15544389841 scopus 로고    scopus 로고
    • Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution
    • 10.1534/genetics.104.037051 15654095
    • Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution. X He Zhang, Genetics 2005 169 1157 1164 10.1534/genetics.104.037051 15654095
    • (2005) Genetics , vol.169 , pp. 1157-1164
    • Zhang He, X.1
  • 44
    • 21344439563 scopus 로고    scopus 로고
    • Subfunctionalization of duplicated genes as a transition state to neofunctionalization
    • 10.1186/1471-2148-5-28 15831095
    • Subfunctionalization of duplicated genes as a transition state to neofunctionalization. S Rastogi DA Liberles, BMC Evol Biol 2005 5 28 10.1186/1471-2148-5-28 15831095
    • (2005) BMC Evol Biol , vol.5 , pp. 28
    • Rastogi, S.1    Liberles, D.A.2
  • 45
    • 34548831118 scopus 로고    scopus 로고
    • Evaluating dosage compensation as a cause of duplicate gene retention in Paramecium tetraurelia
    • 10.1186/gb-2007-8-5-213 17521457
    • Evaluating dosage compensation as a cause of duplicate gene retention in Paramecium tetraurelia. T Hughes D Ekman H Ardawatia A Elofsson DA Liberles, Genome Biol 2007 8 213 10.1186/gb-2007-8-5-213 17521457
    • (2007) Genome Biol , vol.8 , pp. 213
    • Hughes, T.1    Ekman, D.2    Ardawatia, H.3    Elofsson, A.4    Liberles, D.A.5
  • 46
    • 17844373261 scopus 로고    scopus 로고
    • Evolutionary dynamics of olfactory receptor genes in fishes and tetrapods
    • 10.1073/pnas.0501922102 15824306
    • Evolutionary dynamics of olfactory receptor genes in fishes and tetrapods. Y Niimura M Nei, Proc Natl Acad Sci USA 2005 102 6039 6044 10.1073/pnas.0501922102 15824306
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 6039-6044
    • Niimura, Y.1    Nei, M.2
  • 47
    • 14644399312 scopus 로고    scopus 로고
    • A comparison of the human and chimpanzee olfactory receptor gene repertoires
    • 10.1101/gr.2846405 15687286
    • A comparison of the human and chimpanzee olfactory receptor gene repertoires. Y Gilad O Man G Glusman, Genome Res 2005 15 224 230 10.1101/gr.2846405 15687286
    • (2005) Genome Res , vol.15 , pp. 224-230
    • Gilad, Y.1    Man, O.2    Glusman, G.3
  • 48
    • 21144437565 scopus 로고    scopus 로고
    • Phosphodiesterase: Overview of protein structures, potential therapeutic applications and recent progress in drug development
    • 10.1007/s00018-005-4533-5 15798894
    • Phosphodiesterase: overview of protein structures, potential therapeutic applications and recent progress in drug development. YH Jeon YS Heo CM Kim YL Hyun TG Lee S Ro JM Cho, Cell Mol Life Sci 2005 62 1198 1220 10.1007/s00018-005-4533-5 15798894
    • (2005) Cell Mol Life Sci , vol.62 , pp. 1198-1220
    • Jeon, Y.H.1    Heo, Y.S.2    Kim, C.M.3    Hyun, Y.L.4    Lee, T.G.5    Ro, S.6    Cho, J.M.7
  • 49
    • 62649155906 scopus 로고    scopus 로고
    • Evolution of multiple phosphodiesterase isoforms in stickleback involved in cAMP signal transduction pathway
    • 10.1186/1752-0509-3-23 19232106
    • Evolution of multiple phosphodiesterase isoforms in stickleback involved in cAMP signal transduction pathway. Y Sato Y Hashiguchi M Nishida, BMC Syst Biol 2009 3 23 10.1186/1752-0509-3-23 19232106
    • (2009) BMC Syst Biol , vol.3 , pp. 23
    • Sato, Y.1    Hashiguchi, Y.2    Nishida, M.3
  • 50
    • 0032555668 scopus 로고    scopus 로고
    • Doubled genes may explain fish diversity
    • Doubled genes may explain fish diversity. G Vogel, Science 1998 281 1119 1121 10.1126/science.281.5380.1119 9735022 (Pubitemid 28406250)
    • (1998) Science , vol.281 , Issue.5380 , pp. 1119-1121
    • Vogel, G.1
  • 51
    • 0033602459 scopus 로고    scopus 로고
    • Vertebrate genomics: More fishy tales about Hox genes
    • 10.1016/S0960-9822(99)80131-6 10209088
    • Vertebrate genomics: More fishy tales about Hox genes. A Meyer E Malaga-Trillo, Curr Biol 1999 9 R210 R213 10.1016/S0960-9822(99)80131-6 10209088
    • (1999) Curr Biol , vol.9
    • Meyer, A.1    Malaga-Trillo, E.2
  • 52
    • 0032733930 scopus 로고    scopus 로고
    • Gene and genome duplications in vertebrates: The one-to-four (-to-eight in fish) rule and the evolution of novel gene functions
    • 10.1016/S0955-0674(99)00039-3 10600714
    • Gene and genome duplications in vertebrates: the one-to-four (-to-eight in fish) rule and the evolution of novel gene functions. A Meyer M Schartl, Curr Opin Cell Biol 1999 11 699 704 10.1016/S0955-0674(99)00039-3 10600714
    • (1999) Curr Opin Cell Biol , vol.11 , pp. 699-704
    • Meyer, A.1    Schartl, M.2
  • 53
    • 0035368224 scopus 로고    scopus 로고
    • Genome duplication, divergent resolution and speciation
    • 10.1016/S0168-9525(01)02318-6 11377777
    • Genome duplication, divergent resolution and speciation. JS Taylor Y Van de Peer A Meyer, Trends Genet 2001 17 299 301 10.1016/S0168-9525(01)02318-6 11377777
    • (2001) Trends Genet , vol.17 , pp. 299-301
    • Taylor, J.S.1    De, P.Y.V.2    Meyer, A.3
  • 54
    • 33646572856 scopus 로고    scopus 로고
    • What is the role of genome duplication in the evolution of complexity and diversity?
    • 10.1093/molbev/msj083 16368775
    • What is the role of genome duplication in the evolution of complexity and diversity? KD Crow GP Wagner, Mol Biol Evol 2006 23 887 892 10.1093/molbev/msj083 16368775
    • (2006) Mol Biol Evol , vol.23 , pp. 887-892
    • Crow, K.D.1    Wagner, G.P.2
  • 55
    • 20144366981 scopus 로고    scopus 로고
    • Genome duplication, extinction and vertebrate evolution
    • 10.1016/j.tree.2005.04.008 16701387
    • Genome duplication, extinction and vertebrate evolution. PC Donoghue MA Purnell, Trends Ecol Evol 2005 20 312 319 10.1016/j.tree.2005.04.008 16701387
    • (2005) Trends Ecol Evol , vol.20 , pp. 312-319
    • Donoghue, P.C.1    Purnell, M.A.2
  • 56
    • 2442713832 scopus 로고    scopus 로고
    • GeneWise and Genomewise
    • 10.1101/gr.1865504 15123596
    • GeneWise and Genomewise. E Birney M Clamp R Durbin, Genome Res 2004 14 988 995 10.1101/gr.1865504 15123596
    • (2004) Genome Res , vol.14 , pp. 988-995
    • Birney, E.1    Clamp, M.2    Durbin, R.3
  • 57
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. JD Thompson DG Higgins TJ Gibson, Nucleic Acids Res 1994 22 4673 4680 10.1093/nar/22.22.4673 7984417 (Pubitemid 24354800)
    • (1994) Nucleic Acids Research , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 58
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
    • 10.1093/bib/5.2.150 15260895
    • MEGA3: integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. S Kumar K Tamura Nei, Brief Bioinformatics 2004 5 150 163 10.1093/bib/5.2.150 15260895
    • (2004) Brief Bioinformatics , vol.5 , pp. 150-163
    • Kumar, S.1    Nei Tamura, K.2
  • 59
    • 67649778496 scopus 로고    scopus 로고
    • TREEFINDER. http://www.treefinder.de
    • TREEFINDER
  • 60
    • 13444259388 scopus 로고    scopus 로고
    • TREEFINDER: A powerful graphical analysis environment for molecular phylogenetics
    • 10.1186/1471-2148-4-18 15222900
    • TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics. G Jobb A von Haeseler K Strimmer, BMC Evol Biol 2004 4 18 10.1186/1471-2148-4-18 15222900
    • (2004) BMC Evol Biol , vol.4 , pp. 18
    • Jobb, G.1    Von Haeseler, A.2    Strimmer, K.3
  • 61
    • 41049111540 scopus 로고    scopus 로고
    • Inferring confidence sets of possibly misspecified gene trees
    • 10.1098/rspb.2001.1862
    • Inferring confidence sets of possibly misspecified gene trees. K Strimmer A Rambaut, Proc Roy Soc B 2002 269 137 142 10.1098/rspb.2001.1862
    • (2002) Proc Roy Soc B , vol.269 , pp. 137-142
    • Strimmer, K.1    Rambaut, A.2
  • 62
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: Selection of best-fit models of protein evolution
    • 10.1093/bioinformatics/bti263 15647292
    • ProtTest: selection of best-fit models of protein evolution. F Abascal R Zardoya D Posada, Bioinformatics 2005 21 2104 2105 10.1093/bioinformatics/bti263 15647292
    • (2005) Bioinformatics , vol.21 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 63
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • MODEL TEST: testing the model of DNA substitution. D Posada KA Crandall, Bioinformatics Appl Note 1998 14 817 818 10.1093/bioinformatics/14.9.817 (Pubitemid 28552116)
    • (1998) Bioinformatics , vol.14 , Issue.9 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 64
    • 1542563409 scopus 로고    scopus 로고
    • Initial sequencing and comparative analysis of the mouse genome
    • 10.1038/nature01262 12466850
    • Initial sequencing and comparative analysis of the mouse genome. Mouse Genome Sequencing Consortium, Nature 2002 420 520 562 10.1038/nature01262 12466850
    • (2002) Nature , vol.420 , pp. 520-562
  • 65
    • 0000138101 scopus 로고
    • Probability of fixation of nonfunctional genes at duplicate loci
    • 10.1086/282840
    • Probability of fixation of nonfunctional genes at duplicate loci. M Nei KA Roychoudhury, Am Nat 1973 107 362 372 10.1086/282840
    • (1973) Am Nat , vol.107 , pp. 362-372
    • Nei, M.1    Roychoudhury, K.A.2
  • 66
    • 33846685946 scopus 로고    scopus 로고
    • Gene loss rate: A probabilistic measure for the conservation of eukaryotic genes
    • 10.1093/nar/gkl792 17158152
    • Gene loss rate: a probabilistic measure for the conservation of eukaryotic genes. E Borenstein T Shlomi E Ruppin R Sharan, Nucleic Acids Res 2007 35 e7 10.1093/nar/gkl792 17158152
    • (2007) Nucleic Acids Res , vol.35 , pp. 7
    • Borenstein, E.1    Shlomi, T.2    Ruppin, E.3    Sharan, R.4
  • 67
    • 18444384524 scopus 로고    scopus 로고
    • Calmodulin genes in zebrafish (revisited)
    • 10.1007/s11033-004-2891-y 15865211
    • Calmodulin genes in zebrafish (revisited). F Friedberg L Taliaferro, Mol Biol Rep 2005 32 55 60 10.1007/s11033-004-2891-y 15865211
    • (2005) Mol Biol Rep , vol.32 , pp. 55-60
    • Friedberg, F.1    Taliaferro, L.2
  • 68
    • 30744472932 scopus 로고    scopus 로고
    • Contrasting modes of evolution between vertebrate sweet/umami receptor genes and bitter receptor genes
    • 10.1093/molbev/msj028 16207936
    • Contrasting modes of evolution between vertebrate sweet/umami receptor genes and bitter receptor genes. P Shi J Zhang, Mol Biol Evol 2006 23 292 300 10.1093/molbev/msj028 16207936
    • (2006) Mol Biol Evol , vol.23 , pp. 292-300
    • Shi, P.1    Zhang, J.2
  • 69
    • 28444468084 scopus 로고    scopus 로고
    • Two families of candidate taste receptors in fishes
    • 10.1016/j.mod.2005.07.005 16274966
    • Two families of candidate taste receptors in fishes. Y Ishimaru S Okada H Naito T Nagai A Yasuoka I Matsumoto K Abe, Mech Dev 2005 122 1310 1321 10.1016/j.mod.2005.07.005 16274966
    • (2005) Mech Dev , vol.122 , pp. 1310-1321
    • Ishimaru, Y.1    Okada, S.2    Naito, H.3    Nagai, T.4    Yasuoka, A.5    Matsumoto, I.6    Abe, K.7
  • 70
    • 34249321627 scopus 로고    scopus 로고
    • Diversification and adaptive evolution of putative sweet taste receptors in threespine stickleback
    • 10.1016/j.gene.2007.03.015 17467198
    • Diversification and adaptive evolution of putative sweet taste receptors in threespine stickleback. Y Hashiguchi Y Furuta R Kawahara M Nishida, Gene 2007 396 170 179 10.1016/j.gene.2007.03.015 17467198
    • (2007) Gene , vol.396 , pp. 170-179
    • Hashiguchi, Y.1    Furuta, Y.2    Kawahara, R.3    Nishida, M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.