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Volumn 7, Issue , 2009, Pages

Analysis of gene expression profiles in HeLa cells in response to overexpression or siRNA-mediated depletion of NASP

Author keywords

[No Author keywords available]

Indexed keywords

CELL CYCLE PROTEIN; CHORIONIC GONADOTROPIN; COMPLEMENTARY RNA; CXCL1 CHEMOKINE; DICKKOPF 1 PROTEIN; EARLY GROWTH RESPONSE FACTOR 1; FIBROBLAST GROWTH FACTOR; FOLLISTATIN; FOLLITROPIN; HEAT SHOCK PROTEIN 70; HEAT SHOCK PROTEIN 90; HISTONE H1; HISTONE H3; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; INTERFERON REGULATORY FACTOR 7; INTERFERON REGULATORY FACTOR 9; INTERLEUKIN 1ALPHA; INTERLEUKIN 6; NUCLEAR AUTOANTIGENIC SPERM PROTEIN; PROTEIN FOS; PROTEIN P53; RNA; SMALL INTERFERING RNA; STAT1 PROTEIN; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR E2F8; TRANSCRIPTION FACTOR HOXA10; TUMOR NECROSIS FACTOR; TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED FACTOR 6; UNCLASSIFIED DRUG; AUTOANTIGEN; NASP PROTEIN, HUMAN; NUCLEAR PROTEIN;

EID: 66749110375     PISSN: None     EISSN: 14777827     Source Type: Journal    
DOI: 10.1186/1477-7827-7-45     Document Type: Article
Times cited : (24)

References (53)
  • 1
    • 0034730502 scopus 로고    scopus 로고
    • Characterization of the histone H1-binding protein, NASP, as a cell cycle-regulated somatic protein
    • 10.1074/jbc.M003781200 10893414
    • Richardson RT Batova IN Widgren EE Zheng L-X Whitfield M Marzluff WF O'Rand MG Characterization of the histone H1-binding protein, NASP, as a cell cycle-regulated somatic protein J Biol Chem 2000, 275(39):30378-30386. 10.1074/jbc.M003781200 10893414
    • (2000) J Biol Chem , vol.275 , Issue.39 , pp. 30378-30386
    • Richardson, R.T.1    Batova, I.N.2    Widgren, E.E.3    Zheng, L.-X.4    Whitfield, M.5    Marzluff, W.F.6    O'Rand, M.G.7
  • 4
    • 52149124653 scopus 로고    scopus 로고
    • Prognostic breast cancer signature identified from 3D culture model accurately predicts clinical outcome across independent datasets
    • 2500166 18714348 10.1371/journal.pone.0002994
    • Martin KJ Patrick DR Bissell MJ Fournier MV Prognostic breast cancer signature identified from 3D culture model accurately predicts clinical outcome across independent datasets PLoS ONE 2008, 3(8):e2994. 2500166 18714348 10.1371/journal.pone.0002994
    • (2008) PLoS ONE , vol.3 , Issue.8
    • Martin, K.J.1    Patrick, D.R.2    Bissell, M.J.3    Fournier, M.V.4
  • 6
    • 23044488979 scopus 로고    scopus 로고
    • Two distinct nucleosome assembly pathways: Dependent or independent of DNA synthesis promoted by histone H3.1 and H3.3 complexes
    • 10.1101/sqb.2004.69.273 16117659
    • Nakatani Y Ray-Gallet D Quivy J Tagami H Almouzni G Two distinct nucleosome assembly pathways: Dependent or independent of DNA synthesis promoted by histone H3.1 and H3.3 complexes Cold Spring Harb Symp Quant Biol 2004, 69:273-280. 10.1101/sqb.2004.69.273 16117659
    • (2004) Cold Spring Harb Symp Quant Biol , vol.69 , pp. 273-280
    • Nakatani, Y.1    Ray-Gallet, D.2    Quivy, J.3    Tagami, H.4    Almouzni, G.5
  • 7
    • 0742304304 scopus 로고    scopus 로고
    • Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis
    • 10.1016/S0092-8674(03)01064-X 14718166
    • Tagami H Ray-Gallet D Almouzni G Nakatani Y Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis Cell 2004, 116(1):51-61. 10.1016/S0092-8674(03)01064-X 14718166
    • (2004) Cell , vol.116 , Issue.1 , pp. 51-61
    • Tagami, H.1    Ray-Gallet, D.2    Almouzni, G.3    Nakatani, Y.4
  • 9
    • 24344482088 scopus 로고    scopus 로고
    • Mass spectrometry identification of NASP binding partners in HeLa cells
    • 10.1002/prot.20600 16080155
    • Alekseev OM Richardson RT Pope MR O'Rand MG Mass spectrometry identification of NASP binding partners in HeLa cells Proteins 2005, 61(1):1-5. 10.1002/prot.20600 16080155
    • (2005) Proteins , vol.61 , Issue.1 , pp. 1-5
    • Alekseev, O.M.1    Richardson, R.T.2    Pope, M.R.3    O'Rand, M.G.4
  • 10
    • 13244295625 scopus 로고    scopus 로고
    • Association of NASP with HSP90 in mouse spermatogenic cells: Stimulation of ATPase activity and transport of linker histones into nuclei
    • 10.1074/jbc.M410397200 15533935
    • Alekseev OM Widgren EE Richardson RT O'Rand MG Association of NASP with HSP90 in mouse spermatogenic cells: Stimulation of ATPase activity and transport of linker histones into nuclei J Biol Chem 2005, 280(4):2904-2911. 10.1074/jbc.M410397200 15533935
    • (2005) J Biol Chem , vol.280 , Issue.4 , pp. 2904-2911
    • Alekseev, O.M.1    Widgren, E.E.2    Richardson, R.T.3    O'Rand, M.G.4
  • 11
    • 51049086205 scopus 로고    scopus 로고
    • sNASP, a histone H1-specific eukaryotic chaperone dimer that facilitates chromatin assembly
    • 10.1529/biophysj.108.130021 18456819
    • Finn RM Browne K Hodgson KC Ausio J sNASP, a histone H1-specific eukaryotic chaperone dimer that facilitates chromatin assembly Biophys J 2008, 95(3):1314-1325. 10.1529/biophysj.108.130021 18456819
    • (2008) Biophys J , vol.95 , Issue.3 , pp. 1314-1325
    • Finn, R.M.1    Browne, K.2    Hodgson, K.C.3    Ausio, J.4
  • 12
    • 54849416139 scopus 로고    scopus 로고
    • Evolutionarily conserved transcriptional co-expression guiding embryonic stem cell differentiation
    • 2566604 18923680 10.1371/journal.pone.0003406
    • Sun Y Li H Liu Y Mattson MP Rao MS Zhan M Evolutionarily conserved transcriptional co-expression guiding embryonic stem cell differentiation PLoS ONE 2008, 3(10):e3406. 2566604 18923680 10.1371/ journal.pone.0003406
    • (2008) PLoS ONE , vol.3 , Issue.10
    • Sun, Y.1    Li, H.2    Liu, Y.3    Mattson, M.P.4    Rao, M.S.5    Zhan, M.6
  • 13
    • 0037424248 scopus 로고    scopus 로고
    • Overexpression of the linker histone-binding protein tNASP affects progression through the cell cycle
    • 10.1074/jbc.M210352200 12509435
    • Alekseev OM Bencic DC Richardson RT Widgren EE O'Rand MG Overexpression of the linker histone-binding protein tNASP affects progression through the cell cycle J Biol Chem 2003, 278(10):8846-8852. 10.1074/ jbc.M210352200 12509435
    • (2003) J Biol Chem , vol.278 , Issue.10 , pp. 8846-8852
    • Alekseev, O.M.1    Bencic, D.C.2    Richardson, R.T.3    Widgren, E.E.4    O'Rand, M.G.5
  • 15
    • 0033178915 scopus 로고    scopus 로고
    • Analysis with flow cytometry of green fluorescent protein expression in leukemic cells
    • 10.1002/(SICI)1097-0320(19990801)36:4<333::AID-CYTO8>3.0.CO;2-F 10404149
    • Chu Y-W Wang R Schmid I Sakamoto KM Analysis with flow cytometry of green fluorescent protein expression in leukemic cells Cytometry 1999, 36(4):333-339. 10.1002/ (SICI)1097-0320(19990801)36:4<333::AID-CYTO8>3.0.CO;2-F 10404149
    • (1999) Cytometry , vol.36 , Issue.4 , pp. 333-339
    • Chu, Y.-W.1    Wang, R.2    Schmid, I.3    Sakamoto, K.M.4
  • 16
    • 33646050344 scopus 로고    scopus 로고
    • Delivery of short hairpin RNAs - Triggers of gene silencing - Into mouse embryonic stem cells
    • 10.1038/nmeth0506-397
    • Schaniel C Li F Schafer XL Moore T Lemischka IR Paddison PJ Delivery of short hairpin RNAs - triggers of gene silencing - into mouse embryonic stem cells Nat Meth 2006, 3(5):397-400. 10.1038/nmeth0506-397
    • (2006) Nat Meth , vol.3 , Issue.5 , pp. 397-400
    • Schaniel, C.1    Li, F.2    Schafer, X.L.3    Moore, T.4    Lemischka, I.R.5    Paddison, P.J.6
  • 17
    • 0036810248 scopus 로고    scopus 로고
    • RNAi-mediated PTB depletion leads to enhanced exon definition
    • 10.1016/S1097-2765(02)00645-7 12419237
    • Wagner EJ Garcia-Blanco MA RNAi-mediated PTB depletion leads to enhanced exon definition Molecular Cell 2002, 10(4):943-949. 10.1016/ S1097-2765(02)00645-7 12419237
    • (2002) Molecular Cell , vol.10 , Issue.4 , pp. 943-949
    • Wagner, E.J.1    Garcia-Blanco, M.A.2
  • 18
    • 66749150076 scopus 로고    scopus 로고
    • Gene Expression Omnibus http://www.ncbi.nlm.nih.gov/geo/
  • 19
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • 33173 11309499 10.1073/pnas.091062498
    • Tusher V Tibshirani R Chu G Significance analysis of microarrays applied to the ionizing radiation response Proc Natl Acad Sci USA 2001, 98(9):5116-5121. 33173 11309499 10.1073/pnas.091062498
    • (2001) Proc Natl Acad Sci USA , vol.98 , Issue.9 , pp. 5116-5121
    • Tusher, V.1    Tibshirani, R.2    Chu, G.3
  • 20
    • 0344319833 scopus 로고    scopus 로고
    • Identifying biological themes within lists of genes with EASE
    • 328459 14519205 10.1186/gb-2003-4-10-r70
    • Hosack D Dennis G Sherman B Lane H Lempicki R Identifying biological themes within lists of genes with EASE Genome Biology 2003, 4(10):R70. 328459 14519205 10.1186/gb-2003-4-10-r70
    • (2003) Genome Biology , vol.4 , Issue.10
    • Hosack, D.1    Dennis, G.2    Sherman, B.3    Lane, H.4    Lempicki, R.5
  • 21
    • 66749176267 scopus 로고    scopus 로고
    • Ingenuity Systems http://www.ingenuity.com
  • 24
    • 29344439194 scopus 로고    scopus 로고
    • Microarray analysis of androgen-regulated gene expression in testis: The use of the androgen-binding protein (ABP)-transgenic mouse as a model
    • 1327675 16336681 10.1186/1477-7827-3-70
    • Petrusz P Jeyaraj D Grossman G Microarray analysis of androgen-regulated gene expression in testis: The use of the androgen-binding protein (ABP)-transgenic mouse as a model Reprod Biol Endocrinol 2005, 3(1):70. 1327675 16336681 10.1186/1477-7827-3-70
    • (2005) Reprod Biol Endocrinol , vol.3 , Issue.1 , pp. 70
    • Petrusz, P.1    Jeyaraj, D.2    Grossman, G.3
  • 25
    • 0035936797 scopus 로고    scopus 로고
    • The TNF and TNF receptor superfamilies: Integrating mammalian biology
    • 10.1016/S0092-8674(01)00237-9 11239407-
    • Locksley RM Killeen N Lenardo MJ The TNF and TNF receptor superfamilies: integrating mammalian biology Cell 2001, 104(4):487-501. 10.1016/ S0092-8674(01)00237-9 11239407-
    • (2001) Cell , vol.104 , Issue.4 , pp. 487-501
    • Locksley, R.M.1    Killeen, N.2    Lenardo, M.J.3
  • 26
    • 41849116690 scopus 로고    scopus 로고
    • Roles of unphosphorylated STATs in signaling
    • 10.1038/cr.2008.41 18364677
    • Yang J Stark GR Roles of unphosphorylated STATs in signaling Cell Res 2008, 18(4):443-451. 10.1038/cr.2008.41 18364677
    • (2008) Cell Res , vol.18 , Issue.4 , pp. 443-451
    • Yang, J.1    Stark, G.R.2
  • 29
    • 0037115421 scopus 로고    scopus 로고
    • Gadd45a protects against UV irradiation-induced skin tumors, and promotes apoptosis and stress signaling via MAPK and p53
    • 12499274
    • Hildesheim J Bulavin DV Anver MR Alvord WG Hollander MC Vardanian L Fornace AJ Jr Gadd45a protects against UV irradiation-induced skin tumors, and promotes apoptosis and stress signaling via MAPK and p53 Cancer Res 2002, 62(24):7305-7315. 12499274
    • (2002) Cancer Res , vol.62 , Issue.24 , pp. 7305-7315
    • Hildesheim, J.1    Bulavin, D.V.2    Anver, M.R.3    Alvord, W.G.4    Hollander, M.C.5    Vardanian, L.6    Fornace Jr., A.J.7
  • 30
    • 38149018530 scopus 로고    scopus 로고
    • Concurrent down-regulation of Egr-1 and gelsolin in the majority of human breast cancer cells
    • 18204200
    • Liu J Liu Y Huang G Yao C Li S Yang W Yang D Huang R Concurrent down-regulation of Egr-1 and gelsolin in the majority of human breast cancer cells Cancer Genomics Proteomics 2007, 4(6):377-385. 18204200
    • (2007) Cancer Genomics Proteomics , vol.4 , Issue.6 , pp. 377-385
    • Liu, J.1    Liu, Y.2    Huang, G.3    Yao, C.4    Li, S.5    Yang, W.6    Yang, D.7    Huang, R.8
  • 31
  • 33
    • 0037222428 scopus 로고    scopus 로고
    • TP53 family members and human cancers
    • 10.1002/humu.10172 12619104
    • Bénard J Douc-Rasy S Ahomadegbe J-C TP53 family members and human cancers Human Mutation 2003, 21(3):182-191. 10.1002/humu.10172 12619104
    • (2003) Human Mutation , vol.21 , Issue.3 , pp. 182-191
    • Bénard, J.1    Douc-Rasy, S.2    Ahomadegbe, J.-C.3
  • 34
  • 35
    • 4344577088 scopus 로고    scopus 로고
    • Role of p53 in sensing oxidative DNA damage in response to reactive oxygen species-generating agents
    • 10.1158/0008-5472.CAN-04-0494 15342409
    • Achanta G Huang P Role of p53 in sensing oxidative DNA damage in response to reactive oxygen species-generating agents Cancer Res 2004, 64(17):6233-6239. 10.1158/0008-5472.CAN-04-0494 15342409
    • (2004) Cancer Res , vol.64 , Issue.17 , pp. 6233-6239
    • Achanta, G.1    Huang, P.2
  • 37
    • 20544452533 scopus 로고    scopus 로고
    • Aminothiol WR1065 induces differential gene expression in the presence of wild-type p53
    • 10.1038/sj.onc.1208563 15750621
    • Mann K Hainaut P Aminothiol WR1065 induces differential gene expression in the presence of wild-type p53 Oncogene 2005, 24(24):3964-3975. 10.1038/sj.onc.1208563 15750621
    • (2005) Oncogene , vol.24 , Issue.24 , pp. 3964-3975
    • Mann, K.1    Hainaut, P.2
  • 38
    • 0037200028 scopus 로고    scopus 로고
    • Kruppel-like zinc fingers bind to nuclear import proteins and are required for efficient nuclear localization of erythroid Kruppel-like factor
    • 10.1074/jbc.M205677200 12072445
    • Quadrini KJ Bieker JJ Kruppel-like zinc fingers bind to nuclear import proteins and are required for efficient nuclear localization of erythroid Kruppel-like factor J Biol Chem 2002, 277(35):32243-32252. 10.1074/jbc.M205677200 12072445
    • (2002) J Biol Chem , vol.277 , Issue.35 , pp. 32243-32252
    • Quadrini, K.J.1    Bieker, J.J.2
  • 39
    • 0036903977 scopus 로고    scopus 로고
    • A developmentally regulated ARF-like 5 protein (ARL5), localized to nuclei and nucleoli, interacts with heterochromatin protein 1
    • 10.1242/jcs.00123 12414990
    • Lin CY Li CC Huang PH Lee FJ A developmentally regulated ARF-like 5 protein (ARL5), localized to nuclei and nucleoli, interacts with heterochromatin protein 1 J Cell Sci 2002, 115(23):4433-4445. 10.1242/ jcs.00123 12414990
    • (2002) J Cell Sci , vol.115 , Issue.23 , pp. 4433-4445
    • Lin, C.Y.1    Li, C.C.2    Huang, P.H.3    Lee, F.J.4
  • 40
    • 57749099220 scopus 로고    scopus 로고
    • A thermodynamic model for Nap1-histone interactions
    • 2583301 18728017 10.1074/jbc.M805918200
    • Andrews AJ Downing G Brown K Park YJ Luger K A thermodynamic model for Nap1-histone interactions J Biol Chem 2008, 283(47):32412-32418. 2583301 18728017 10.1074/jbc.M805918200
    • (2008) J Biol Chem , vol.283 , Issue.47 , pp. 32412-32418
    • Andrews, A.J.1    Downing, G.2    Brown, K.3    Park, Y.J.4    Luger, K.5
  • 42
    • 0034457003 scopus 로고    scopus 로고
    • Follistatin is a modulator of gonadal tumor progression and the activin-induced wasting syndrome in inhibin-deficient mice
    • 10.1210/en.141.7.2319 10875231
    • Cipriano SC Chen L Kumar TR Matzuk MM Follistatin is a modulator of gonadal tumor progression and the activin-induced wasting syndrome in inhibin-deficient mice Endocrinology 2000, 141(7):2319-2327. 10.1210/ en.141.7.2319 10875231
    • (2000) Endocrinology , vol.141 , Issue.7 , pp. 2319-2327
    • Cipriano, S.C.1    Chen, L.2    Kumar, T.R.3    Matzuk, M.M.4
  • 43
    • 0842346190 scopus 로고    scopus 로고
    • Transforming growth factor-beta-related proteins: An ancestral and widespread superfamily of cytokines in metazoans
    • 10.1016/j.dci.2003.09.007 15062644
    • Herpin A Lelong C Favrel P Transforming growth factor-beta-related proteins: An ancestral and widespread superfamily of cytokines in metazoans Dev Comp Immunol 2004, 28(5):461-485. 10.1016/ j.dci.2003.09.007 15062644
    • (2004) Dev Comp Immunol , vol.28 , Issue.5 , pp. 461-485
    • Herpin, A.1    Lelong, C.2    Favrel, P.3
  • 44
    • 0028926210 scopus 로고
    • Sexually dimorphic sterility phenotypes in HoxalO-deficient mice
    • 10.1038/374460a0 7700356
    • Satokata I Benson G Maas R Sexually dimorphic sterility phenotypes in HoxalO-deficient mice Nature 1995, 374(6521):460-463. 10.1038/374460a0 7700356
    • (1995) Nature , vol.374 , Issue.6521 , pp. 460-463
    • Satokata, I.1    Benson, G.2    Maas, R.3
  • 45
    • 33744982066 scopus 로고    scopus 로고
    • A novel chemical-defined medium with bFGF and N2B27 supplements supports undifferentiated growth in human embryonic stem cells
    • 10.1016/j.bbrc.2006.05.086 16753134
    • Liu Y Song Z Zhao Y Qin H Cai J Zhang H Yu T Jiang S Wang G Ding M Deng H A novel chemical-defined medium with bFGF and N2B27 supplements supports undifferentiated growth in human embryonic stem cells Biochem Biophys Res Commun 2006, 346(1):131-139. 10.1016/j.bbrc.2006.05.086 16753134
    • (2006) Biochem Biophys Res Commun , vol.346 , Issue.1 , pp. 131-139
    • Liu, Y.1    Song, Z.2    Zhao, Y.3    Qin, H.4    Cai, J.5    Zhang, H.6    Yu, T.7    Jiang, S.8    Wang, G.9    Ding, M.10    Deng, H.11
  • 47
    • 0034627798 scopus 로고    scopus 로고
    • Tumor Necrosis Factor Receptor-Associated Factor (TRAF) family: Adapter proteins that mediate cytokine signaling
    • 10.1006/excr.1999.4733 10623461
    • Inoue J Ishida T Tsukamoto N Kobayashi N Naito A Azuma S Yamamoto T Tumor Necrosis Factor Receptor-Associated Factor (TRAF) family: Adapter proteins that mediate cytokine signaling Exp Cell Res 2000, 254(1):14-24. 10.1006/excr.1999.4733 10623461
    • (2000) Exp Cell Res , vol.254 , Issue.1 , pp. 14-24
    • Inoue, J.1    Ishida, T.2    Tsukamoto, N.3    Kobayashi, N.4    Naito, A.5    Azuma, S.6    Yamamoto, T.7
  • 50
    • 27544468372 scopus 로고    scopus 로고
    • The Fos family of transcription factors and their role in tumourigenesis
    • 10.1016/j.ejca.2005.08.008 16199154
    • Milde-Langosch K The Fos family of transcription factors and their role in tumourigenesis Eur J Cancer 2005, 41(16):2449-2461. 10.1016/ j.ejca.2005.08.008 16199154
    • (2005) Eur J Cancer , vol.41 , Issue.16 , pp. 2449-2461
    • Milde-Langosch, K.1
  • 51
    • 0037145037 scopus 로고    scopus 로고
    • Integrins: Bidirectional, allosteric signaling machines
    • 10.1016/S0092-8674(02)00971-6 12297042
    • Hynes RO Integrins: Bidirectional, allosteric signaling machines Cell 2002, 110(6):673-687. 10.1016/S0092-8674(02)00971-6 12297042
    • (2002) Cell , vol.110 , Issue.6 , pp. 673-687
    • Hynes, R.O.1
  • 52
    • 0037962085 scopus 로고    scopus 로고
    • Distinct signaling pathways regulate differential opioid effects on actin cytoskeleton in malignant MCF7 and nonmalignant MCF12A human breast epithelial cells
    • 10.1016/S0014-4827(03)00210-6 12878162
    • Kallergi G Tsapara A Kampa M Papakonstanti EA Krasagakis K Castanas E Stournaras C Distinct signaling pathways regulate differential opioid effects on actin cytoskeleton in malignant MCF7 and nonmalignant MCF12A human breast epithelial cells Exp Cell Res 2003, 288(1):94-109. 10.1016/ S0014-4827(03)00210-6 12878162
    • (2003) Exp Cell Res , vol.288 , Issue.1 , pp. 94-109
    • Kallergi, G.1    Tsapara, A.2    Kampa, M.3    Papakonstanti, E.A.4    Krasagakis, K.5    Castanas, E.6    Stournaras, C.7
  • 53
    • 0021279260 scopus 로고
    • Epidermal growth factor immunoreactive material in the central nervous system: Location and development
    • 10.1126/science.6144184 6144184
    • Fallon J Seroogy K Loughlin S Morrison R Bradshaw R Knaver D Cunningham D Epidermal growth factor immunoreactive material in the central nervous system: Location and development Science 1984, 224(4653):1107-1109. 10.1126/science.6144184 6144184
    • (1984) Science , vol.224 , Issue.4653 , pp. 1107-1109
    • Fallon, J.1    Seroogy, K.2    Loughlin, S.3    Morrison, R.4    Bradshaw, R.5    Knaver, D.6    Cunningham, D.7


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