메뉴 건너뛰기




Volumn 118, Issue 1, 2009, Pages 25-36

Chromatin domains in higher eukaryotes: Insights from genome-wide mapping studies

Author keywords

[No Author keywords available]

Indexed keywords

DNA; POLYCOMB GROUP PROTEIN;

EID: 58349114015     PISSN: 00095915     EISSN: 14320886     Source Type: Journal    
DOI: 10.1007/s00412-008-0186-0     Document Type: Review
Times cited : (44)

References (107)
  • 1
    • 34250777112 scopus 로고    scopus 로고
    • The nuclear envelope and transcriptional control
    • Akhtar A, Gasser SM (2007) The nuclear envelope and transcriptional control. Nat Rev 8:507-517
    • (2007) Nat Rev , vol.8 , pp. 507-517
    • Akhtar, A.1    Gasser, S.M.2
  • 3
    • 34249299791 scopus 로고    scopus 로고
    • The complex language of chromatin regulation during transcription
    • Berger SL (2007) The complex language of chromatin regulation during transcription. Nature 447:407-412
    • (2007) Nature , vol.447 , pp. 407-412
    • Berger, S.L.1
  • 8
    • 33646870495 scopus 로고    scopus 로고
    • Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions
    • Bracken AP, Dietrich N, Pasini D, Hansen KH, Helin K (2006) Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions. Genes Dev 20:1123-1136
    • (2006) Genes Dev , vol.20 , pp. 1123-1136
    • Bracken, A.P.1    Dietrich, N.2    Pasini, D.3    Hansen, K.H.4    Helin, K.5
  • 10
    • 33746472337 scopus 로고    scopus 로고
    • Probing long-distance regulatory interactions in the Drosophila melanogaster bithorax complex using dam identification
    • Cleard F, Moshkin Y, Karch F, Maeda RK (2006) Probing long-distance regulatory interactions in the Drosophila melanogaster bithorax complex using dam identification. Nat Genet 38:931-935
    • (2006) Nat Genet , vol.38 , pp. 931-935
    • Cleard, F.1    Moshkin, Y.2    Karch, F.3    Maeda, R.K.4
  • 12
    • 0029937208 scopus 로고    scopus 로고
    • Genetic modification of heterochromatic association and nuclear organization in Drosophila
    • Csink AK, Henikoff S (1996) Genetic modification of heterochromatic association and nuclear organization in Drosophila. Nature 381:529-531
    • (1996) Nature , vol.381 , pp. 529-531
    • Csink, A.K.1    Henikoff, S.2
  • 15
    • 24344493002 scopus 로고    scopus 로고
    • Genome-wide HP1 binding in Drosophila: Developmental plasticity and genomic targeting signals
    • de Wit E, Greil F, van Steensel B (2005) Genome-wide HP1 binding in Drosophila: Developmental plasticity and genomic targeting signals. Genome Res 15:1265-1273
    • (2005) GENOME Res , vol.15 , pp. 1265-1273
    • de Wit, E.1    Greil, F.2    van Steensel, B.3
  • 16
    • 34047231261 scopus 로고    scopus 로고
    • High-resolution mapping reveals links of HP1 with active and inactive chromatin components
    • de Wit E, Greil F, van Steensel B (2007) High-resolution mapping reveals links of HP1 with active and inactive chromatin components. PLoS Genet 3:e38
    • (2007) PLoS Genet , vol.3
    • de Wit, E.1    Greil, F.2    van Steensel, B.3
  • 18
    • 25444465171 scopus 로고    scopus 로고
    • Global transcriptome analysis of the C57BL/6J mouse testis by SAGE: Evidence for nonrandom gene order
    • Divina P, Vlcek C, Strnad P, Paces V, Forejt J (2005) Global transcriptome analysis of the C57BL/6J mouse testis by SAGE: Evidence for nonrandom gene order. BMC Genom 6:29
    • (2005) BMC Genom , vol.6 , pp. 29
    • Divina, P.1    Vlcek, C.2    Strnad, P.3    Paces, V.4    Forejt, J.5
  • 19
    • 0028286165 scopus 로고
    • Expansions of transgene repeats cause heterochromatin formation and gene silencing in Drosophila
    • Dorer DR, Henikoff S (1994) Expansions of transgene repeats cause heterochromatin formation and gene silencing in Drosophila. Cell 77:993-1002
    • (1994) Cell , vol.77 , pp. 993-1002
    • Dorer, D.R.1    Henikoff, S.2
  • 22
    • 34547819351 scopus 로고    scopus 로고
    • The rise and fall of Hox gene clusters
    • Duboule D (2007) The rise and fall of Hox gene clusters. Development (Cambridge, England) 134:2549-2560
    • (2007) Development (Cambridge, England) , vol.134 , pp. 2549-2560
    • Duboule, D.1
  • 23
    • 33745727065 scopus 로고    scopus 로고
    • Histone modification and the control of heterochromatic gene silencing in Drosophila
    • Ebert A, Lein S, Schotta G, Reuter G (2006) Histone modification and the control of heterochromatic gene silencing in Drosophila. Chrom Res 14:377-392
    • (2006) Chrom Res , vol.14 , pp. 377-392
    • Ebert, A.1    Lein, S.2    Schotta, G.3    Reuter, G.4
  • 25
    • 33645787782 scopus 로고    scopus 로고
    • Highly variable rates of genome rearrangements between hemiascomycetous yeast lineages
    • Fischer G, Rocha EP, Brunet F, Vergassola M, Dujon B (2006) Highly variable rates of genome rearrangements between hemiascomycetous yeast lineages. PLoS Genet 2:e32
    • (2006) PLoS Genet , vol.2
    • Fischer, G.1    Rocha, E.P.2    Brunet, F.3    Vergassola, M.4    Dujon, B.5
  • 26
    • 0043127085 scopus 로고    scopus 로고
    • Molecular basis for the discrimination of repressive methyl-lysine marks in histone H3 by Polycomb and HP1 chromodomains
    • Fischle W, Wang Y, Jacobs SA, Kim Y, Allis CD, Khorasanizadeh S (2003) Molecular basis for the discrimination of repressive methyl-lysine marks in histone H3 by Polycomb and HP1 chromodomains. Genes Dev 17:1870-1881
    • (2003) Genes Dev , vol.17 , pp. 1870-1881
    • Fischle, W.1    Wang, Y.2    Jacobs, S.A.3    Kim, Y.4    Allis, C.D.5    Khorasanizadeh, S.6
  • 28
    • 4444258534 scopus 로고    scopus 로고
    • Chromatin architecture of the human genome: Gene-rich domains are enriched in open chromatin fibers
    • Gilbert N, Boyle S, Fiegler H, Woodfine K, Carter NP, Bickmore WA (2004) Chromatin architecture of the human genome: Gene-rich domains are enriched in open chromatin fibers. Cell 118:555-566
    • (2004) Cell , vol.118 , pp. 555-566
    • Gilbert, N.1    Boyle, S.2    Fiegler, H.3    Woodfine, K.4    Carter, N.P.5    Bickmore, W.A.6
  • 30
    • 33747831899 scopus 로고    scopus 로고
    • DamID: Mapping of in vivo protein-genome interactions using tethered DNA adenine methyltransferase
    • Greil F, Moorman C, van Steensel B (2006) DamID: Mapping of in vivo protein-genome interactions using tethered DNA adenine methyltransferase. Methods Enzymol 410:342-359
    • (2006) Methods Enzymol , vol.410 , pp. 342-359
    • Greil, F.1    Moorman, C.2    van Steensel, B.3
  • 31
    • 33846948223 scopus 로고    scopus 로고
    • HP1 controls genomic targeting of four novel heterochromatin proteins in Drosophila
    • Greil F, de Wit E, Bussemaker HJ, van Steensel B (2007) HP1 controls genomic targeting of four novel heterochromatin proteins in Drosophila. EMBO J 26:741-751
    • (2007) EMBO J , vol.26 , pp. 741-751
    • Greil, F.1    de Wit, E.2    Bussemaker, H.J.3    van Steensel, B.4
  • 32
    • 0036532235 scopus 로고    scopus 로고
    • Heterochromatin: New possibilities for the inheritance of structure
    • Grewal SI, Elgin SC (2002) Heterochromatin: New possibilities for the inheritance of structure. Curr Opin Genet Dev 12:178-187
    • (2002) Curr Opin Genet Dev , vol.12 , pp. 178-187
    • Grewal, S.I.1    Elgin, S.C.2
  • 33
    • 33745699100 scopus 로고    scopus 로고
    • From genetics to epigenetics: The tale of Polycomb group and trithorax group genes
    • Grimaud C, Negre N, Cavalli G (2006) From genetics to epigenetics: The tale of Polycomb group and trithorax group genes. Chrom Res 14:363-375
    • (2006) Chrom Res , vol.14 , pp. 363-375
    • Grimaud, C.1    Negre, N.2    Cavalli, G.3
  • 35
    • 38549129312 scopus 로고    scopus 로고
    • CTCF is the master organizer of domain-wide allele-specific chromatin at the H19/Igf2 imprinted region
    • Han L, Lee DH, Szabo PE (2008) CTCF is the master organizer of domain-wide allele-specific chromatin at the H19/Igf2 imprinted region. Mol Cell Biol 28:1124-1135
    • (2008) Mol Cell Biol , vol.28 , pp. 1124-1135
    • Han, L.1    Lee, D.H.2    Szabo, P.E.3
  • 36
    • 33750935679 scopus 로고    scopus 로고
    • Element 1360 and RNAi components contribute to HP1-dependent silencing of a pericentric reporter
    • Haynes KA, Caudy AA, Collins L, Elgin SC (2006) Element 1360 and RNAi components contribute to HP1-dependent silencing of a pericentric reporter. Curr Biol 16:2222-2227
    • (2006) Curr Biol , vol.16 , pp. 2222-2227
    • Haynes, K.A.1    Caudy, A.A.2    Collins, L.3    Elgin, S.C.4
  • 37
    • 33644850958 scopus 로고    scopus 로고
    • Heterochromatin protein 1: Don't judge the book by its cover!
    • Hediger F, Gasser SM (2006) Heterochromatin protein 1: Don't judge the book by its cover!. Curr Opin Genet Dev 16:143-150
    • (2006) Curr Opin Genet Dev , vol.16 , pp. 143-150
    • Hediger, F.1    Gasser, S.M.2
  • 38
    • 34848872591 scopus 로고    scopus 로고
    • The inner nuclear envelope as a transcription factor resting place
    • Heessen S, Fornerod M (2007) The inner nuclear envelope as a transcription factor resting place. EMBO Rep 8:914-919
    • (2007) EMBO Rep , vol.8 , pp. 914-919
    • Heessen, S.1    Fornerod, M.2
  • 41
    • 0036890388 scopus 로고    scopus 로고
    • Natural selection promotes the conservation of linkage of co-expressed genes
    • Hurst LD, Williams EJ, Pal C (2002) Natural selection promotes the conservation of linkage of co-expressed genes. Trends Genet 18:604-606
    • (2002) Trends Genet , vol.18 , pp. 604-606
    • Hurst, L.D.1    Williams, E.J.2    Pal, C.3
  • 42
    • 1842427830 scopus 로고    scopus 로고
    • The evolutionary dynamics of eukaryotic gene order
    • Hurst LD, Pal C, Lercher MJ (2004) The evolutionary dynamics of eukaryotic gene order. Nature Rev 5:299-310
    • (2004) Nature Rev , vol.5 , pp. 299-310
    • Hurst, L.D.1    Pal, C.2    Lercher, M.J.3
  • 43
    • 0022818549 scopus 로고
    • Identification of a nonhistone chromosomal protein associated with heterochromatin in Drosophila melanogaster and its gene
    • James TC, Elgin SC (1986) Identification of a nonhistone chromosomal protein associated with heterochromatin in Drosophila melanogaster and its gene. Mol Cell Biol 6:3862-3872
    • (1986) Mol Cell Biol , vol.6 , pp. 3862-3872
    • James, T.C.1    Elgin, S.C.2
  • 45
    • 38549113035 scopus 로고    scopus 로고
    • Differential chromatin looping regulates CD4 expression in immature thymocytes
    • Jiang H, Peterlin BM (2008) Differential chromatin looping regulates CD4 expression in immature thymocytes. Mol Cell Biol 28:907-912
    • (2008) Mol Cell Biol , vol.28 , pp. 907-912
    • Jiang, H.1    Peterlin, B.M.2
  • 46
    • 37349082452 scopus 로고    scopus 로고
    • POF and HP1 bind expressed exons, suggesting a balancing mechanism for gene regulation
    • Johansson AM, Stenberg P, Pettersson F, Larsson J (2007) POF and HP1 bind expressed exons, suggesting a balancing mechanism for gene regulation. PLoS Genet 3:e209
    • (2007) PLoS Genet , vol.3
    • Johansson, A.M.1    Stenberg, P.2    Pettersson, F.3    Larsson, J.4
  • 47
    • 14844360104 scopus 로고    scopus 로고
    • Regulated chromatin domain comprising cluster of co-expressed genes in Drosophila melanogaster
    • Kalmykova AI, Nurminsky DI, Ryzhov DV, Shevelyov YY (2005) Regulated chromatin domain comprising cluster of co-expressed genes in Drosophila melanogaster. Nucleic Acids Res 33:1435-1444
    • (2005) Nucleic Acids Res , vol.33 , pp. 1435-1444
    • Kalmykova, A.I.1    Nurminsky, D.I.2    Ryzhov, D.V.3    Shevelyov, Y.Y.4
  • 51
    • 38349043904 scopus 로고    scopus 로고
    • A genetic locus targeted to the nuclear periphery in living cells maintains its transcriptional competence
    • Kumaran RI, Spector DL (2008) A genetic locus targeted to the nuclear periphery in living cells maintains its transcriptional competence. J Cell Biol 180:51-65
    • (2008) J Cell Biol , vol.180 , pp. 51-65
    • Kumaran, R.I.1    Spector, D.L.2
  • 52
    • 40749104851 scopus 로고    scopus 로고
    • Chromatin dynamics and gene positioning
    • Kumaran RI, Thakar R, Spector DL (2008) Chromatin dynamics and gene positioning. Cell 132:929-934
    • (2008) Cell , vol.132 , pp. 929-934
    • Kumaran, R.I.1    Thakar, R.2    Spector, D.L.3
  • 53
    • 33846283384 scopus 로고    scopus 로고
    • Dynamic genome architecture in the nuclear space: Regulation of gene expression in three dimensions
    • Lanctot C, Cheutin T, Cremer M, Cavalli G, Cremer T (2007) Dynamic genome architecture in the nuclear space: Regulation of gene expression in three dimensions. Nature Rev 8:104-115
    • (2007) Nature Rev , vol.8 , pp. 104-115
    • Lanctot, C.1    Cheutin, T.2    Cremer, M.3    Cavalli, G.4    Cremer, T.5
  • 54
    • 34848825691 scopus 로고    scopus 로고
    • Polycomb response elements mediate the formation of chromosome higher-order structures in the bithorax complex
    • Lanzuolo C, Roure V, Dekker J, Bantignies F, Orlando V (2007) Polycomb response elements mediate the formation of chromosome higher-order structures in the bithorax complex. Nature Cell Biol 9:1167-1174
    • (2007) Nature Cell Biol , vol.9 , pp. 1167-1174
    • Lanzuolo, C.1    Roure, V.2    Dekker, J.3    Bantignies, F.4    Orlando, V.5
  • 55
    • 0038104857 scopus 로고    scopus 로고
    • Genomic gene clustering analysis of pathways in eukaryotes
    • Lee JM, Sonnhammer EL (2003) Genomic gene clustering analysis of pathways in eukaryotes. Genome Res 13:875-882
    • (2003) Genome Res , vol.13 , pp. 875-882
    • Lee, J.M.1    Sonnhammer, E.L.2
  • 57
    • 0017584322 scopus 로고
    • The organization of the histone genes in Drosophila melanogaster: Functional and evolutionary implications
    • Lifton RP, Goldberg ML, Karp RW, Hogness DS (1978) The organization of the histone genes in Drosophila melanogaster: Functional and evolutionary implications. Cold Spring Harb Symp Quant Biol 42(Pt 2):1047-1051
    • (1978) Cold Spring Harb Symp Quant Biol , vol.42 , Issue.PART 2 , pp. 1047-1051
    • Lifton, R.P.1    Goldberg, M.L.2    Karp, R.W.3    Hogness, D.S.4
  • 58
    • 23444434202 scopus 로고    scopus 로고
    • A genomic view of eukaryotic DNA replication
    • MacAlpine DM, Bell SP (2005) A genomic view of eukaryotic DNA replication. Chrom Res 13:309-326
    • (2005) Chrom Res , vol.13 , pp. 309-326
    • MacAlpine, D.M.1    Bell, S.P.2
  • 60
    • 3342939298 scopus 로고    scopus 로고
    • Clustered organization of reproductive genes in the C. elegans genome
    • Miller MA, Cutter AD, Yamamoto I, Ward S, Greenstein D (2004) Clustered organization of reproductive genes in the C. elegans genome. Curr Biol 14:1284-1290
    • (2004) Curr Biol , vol.14 , pp. 1284-1290
    • Miller, M.A.1    Cutter, A.D.2    Yamamoto, I.3    Ward, S.4    Greenstein, D.5
  • 61
    • 33847077659 scopus 로고    scopus 로고
    • Beyond the sequence: Cellular organization of genome function
    • Misteli T (2007) Beyond the sequence: Cellular organization of genome function. Cell 128:787-800
    • (2007) Cell , vol.128 , pp. 787-800
    • Misteli, T.1
  • 65
    • 45749154811 scopus 로고    scopus 로고
    • Maintenance of long-range DNA interactions after inhibition of ongoing RNA polymerase II transcription
    • Palstra RJ, Simonis M, Klous P, Brasset E, Eijkelkamp B, de Laat W (2008) Maintenance of long-range DNA interactions after inhibition of ongoing RNA polymerase II transcription. PLoS ONE 3:e1661
    • (2008) PLoS ONE , vol.3
    • Palstra, R.J.1    Simonis, M.2    Klous, P.3    Brasset, E.4    Eijkelkamp, B.5    de Laat, W.6
  • 68
    • 40749122641 scopus 로고    scopus 로고
    • Transcriptional repression mediated by repositioning of genes to the nuclear lamina
    • Reddy KL, Zullo JM, Bertolino E, Singh H (2008) Transcriptional repression mediated by repositioning of genes to the nuclear lamina. Nature 452:243-247
    • (2008) Nature , vol.452 , pp. 243-247
    • Reddy, K.L.1    Zullo, J.M.2    Bertolino, E.3    Singh, H.4
  • 69
    • 26944466421 scopus 로고    scopus 로고
    • Local coexpression domains of two to four genes in the genome of Arabidopsis
    • Ren XY, Fiers MW, Stiekema WJ, Nap JP (2005) Local coexpression domains of two to four genes in the genome of Arabidopsis. Plant Physiol 138:923-934
    • (2005) Plant Physiol , vol.138 , pp. 923-934
    • Ren, X.Y.1    Fiers, M.W.2    Stiekema, W.J.3    Nap, J.P.4
  • 70
    • 34250218900 scopus 로고    scopus 로고
    • Polycomb comes of age: Genome-wide profiling of target sites
    • Ringrose L (2007) Polycomb comes of age: Genome-wide profiling of target sites. Curr Opin Cell Biol 19:290-297
    • (2007) Curr Opin Cell Biol , vol.19 , pp. 290-297
    • Ringrose, L.1
  • 71
    • 0037194732 scopus 로고    scopus 로고
    • Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans
    • Roy PJ, Stuart JM, Lund J, Kim SK (2002) Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans. Nature 418:975-979
    • (2002) Nature , vol.418 , pp. 975-979
    • Roy, P.J.1    Stuart, J.M.2    Lund, J.3    Kim, S.K.4
  • 75
    • 0036842221 scopus 로고    scopus 로고
    • Genome-wide DNA replication profile for Drosophila melanogaster: A link between transcription and replication timing
    • Schubeler D, Scalzo D, Kooperberg C, van Steensel B, Delrow J, Groudine M (2002) Genome-wide DNA replication profile for Drosophila melanogaster: A link between transcription and replication timing. Nat Genet 32:438-442
    • (2002) Nat Genet , vol.32 , pp. 438-442
    • Schubeler, D.1    Scalzo, D.2    Kooperberg, C.3    van Steensel, B.4    Delrow, J.5    Groudine, M.6
  • 76
    • 33845799903 scopus 로고    scopus 로고
    • Polycomb silencing mechanisms and the management of genomic programmes
    • Schwartz YB, Pirrotta V (2007) Polycomb silencing mechanisms and the management of genomic programmes. Nat Rev 8:9-22
    • (2007) Nat Rev , vol.8 , pp. 9-22
    • Schwartz, Y.B.1    Pirrotta, V.2
  • 78
    • 33750212321 scopus 로고    scopus 로고
    • Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C)
    • Simonis M, Klous P, Splinter E, Moshkin Y, Willemsen R, de Wit E, van Steensel B, de Laat W (2006) Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C). Nat Genet 38:1348-1354
    • (2006) Nat Genet , vol.38 , pp. 1348-1354
    • Simonis, M.1    Klous, P.2    Splinter, E.3    Moshkin, Y.4    Willemsen, R.5    de Wit, E.6    van Steensel, B.7    de Laat, W.8
  • 79
    • 14544301584 scopus 로고    scopus 로고
    • Clusters of co-expressed genes in mammalian genomes are conserved by natural selection
    • Singer GA, Lloyd AT, Huminiecki LB, Wolfe KH (2005) Clusters of co-expressed genes in mammalian genomes are conserved by natural selection. Mol Biol Evol 22:767-775
    • (2005) Mol Biol Evol , vol.22 , pp. 767-775
    • Singer, G.A.1    Lloyd, A.T.2    Huminiecki, L.B.3    Wolfe, K.H.4
  • 80
    • 26444589253 scopus 로고    scopus 로고
    • The nuclear-envelope protein and transcriptional repressor LAP2beta interacts with HDAC3 at the nuclear periphery, and induces histone H4 deacetylation
    • Somech R, Shaklai S, Geller O, Amariglio N, Simon AJ, Rechavi G, Gal-Yam EN (2005) The nuclear-envelope protein and transcriptional repressor LAP2beta interacts with HDAC3 at the nuclear periphery, and induces histone H4 deacetylation. J Cell Sci 118:4017-4025
    • (2005) J Cell Sci , vol.118 , pp. 4017-4025
    • Somech, R.1    Shaklai, S.2    Geller, O.3    Amariglio, N.4    Simon, A.J.5    Rechavi, G.6    Gal-Yam, E.N.7
  • 81
    • 33750379420 scopus 로고    scopus 로고
    • Polycomb silencers control cell fate, development and cancer
    • Sparmann A, van Lohuizen M (2006) Polycomb silencers control cell fate, development and cancer. Nat Rev Cancer 6:846-856
    • (2006) Nat Rev Cancer , vol.6 , pp. 846-856
    • Sparmann, A.1    van Lohuizen, M.2
  • 82
    • 0003328368 scopus 로고    scopus 로고
    • Evidence for large domains of similarly expressed genes in the Drosophila genome
    • Spellman PT, Rubin GM (2002) Evidence for large domains of similarly expressed genes in the Drosophila genome. J Biol 1:5
    • (2002) J Biol , vol.1 , pp. 5
    • Spellman, P.T.1    Rubin, G.M.2
  • 84
    • 25844496592 scopus 로고    scopus 로고
    • The role of chromatin structure in regulating the expression of clustered genes
    • Sproul D, Gilbert N, Bickmore WA (2005) The role of chromatin structure in regulating the expression of clustered genes. Nat Rev 6:775-781
    • (2005) Nat Rev , vol.6 , pp. 775-781
    • Sproul, D.1    Gilbert, N.2    Bickmore, W.A.3
  • 89
    • 33748805480 scopus 로고    scopus 로고
    • Spreading of silent chromatin: Inaction at a distance
    • Talbert PB, Henikoff S (2006) Spreading of silent chromatin: Inaction at a distance. Nat Rev 7:793-803
    • (2006) Nat Rev , vol.7 , pp. 793-803
    • Talbert, P.B.1    Henikoff, S.2
  • 90
    • 35848961668 scopus 로고    scopus 로고
    • How chromatin-binding modules interpret histone modifications: Lessons from professional pocket pickers
    • Taverna SD, Li H, Ruthenburg AJ, Allis CD, Patel DJ (2007) How chromatin-binding modules interpret histone modifications: Lessons from professional pocket pickers. Nature Struct Mol Biol 14:1025-1040
    • (2007) Nature Struct Mol Biol , vol.14 , pp. 1025-1040
    • Taverna, S.D.1    Li, H.2    Ruthenburg, A.J.3    Allis, C.D.4    Patel, D.J.5
  • 91
    • 4644358610 scopus 로고    scopus 로고
    • Genes encoding subunits of stable complexes are clustered on the yeast chromosomes: An interpretation from a dosage balance perspective
    • Teichmann SA, Veitia RA (2004) Genes encoding subunits of stable complexes are clustered on the yeast chromosomes: An interpretation from a dosage balance perspective. Genetics 167:2121-2125
    • (2004) Genetics , vol.167 , pp. 2121-2125
    • Teichmann, S.A.1    Veitia, R.A.2
  • 92
    • 0036923833 scopus 로고    scopus 로고
    • Looping and interaction between hypersensitive sites in the active beta-globin locus
    • Tolhuis B, Palstra RJ, Splinter E, Grosveld F, de Laat W (2002) Looping and interaction between hypersensitive sites in the active beta-globin locus. Mol Cell 10:1453-1465
    • (2002) Mol Cell , vol.10 , pp. 1453-1465
    • Tolhuis, B.1    Palstra, R.J.2    Splinter, E.3    Grosveld, F.4    de Laat, W.5
  • 94
    • 0035093828 scopus 로고    scopus 로고
    • Chromatin profiling using targeted DNA adenine methyltransferase
    • van Steensel B, Delrow J, Henikoff S (2001) Chromatin profiling using targeted DNA adenine methyltransferase. Nat Genet 27:304-308
    • (2001) Nat Genet , vol.27 , pp. 304-308
    • van Steensel, B.1    Delrow, J.2    Henikoff, S.3
  • 95
    • 0141854009 scopus 로고    scopus 로고
    • The human transcriptome map reveals extremes in gene density, intron length, GC content, and repeat pattern for domains of highly and weakly expressed genes
    • Versteeg R, van Schaik BD, van Batenburg MF, Roos M, Monajemi R, Caron H, Bussemaker HJ, van Kampen AH (2003) The human transcriptome map reveals extremes in gene density, intron length, GC content, and repeat pattern for domains of highly and weakly expressed genes. Genome Res 13:1998-2004
    • (2003) Genome Res , vol.13 , pp. 1998-2004
    • Versteeg, R.1    van Schaik, B.D.2    van Batenburg, M.F.3    Roos, M.4    Monajemi, R.5    Caron, H.6    Bussemaker, H.J.7    van Kampen, A.H.8
  • 97
    • 35548990188 scopus 로고    scopus 로고
    • We gather together: Insulators and genome organization
    • Wallace JA, Felsenfeld G (2007) We gather together: Insulators and genome organization. Curr Opin Genet Dev 17:400-407
    • (2007) Curr Opin Genet Dev , vol.17 , pp. 400-407
    • Wallace, J.A.1    Felsenfeld, G.2
  • 98
    • 24044540381 scopus 로고    scopus 로고
    • Spatial and temporal recruitment of androgen receptor and its coactivators involves chromosomal looping and polymerase tracking
    • Wang Q, Carroll JS, Brown M (2005) Spatial and temporal recruitment of androgen receptor and its coactivators involves chromosomal looping and polymerase tracking. Mol Cell 19:631-642
    • (2005) Mol Cell , vol.19 , pp. 631-642
    • Wang, Q.1    Carroll, J.S.2    Brown, M.3
  • 99
    • 34047116826 scopus 로고    scopus 로고
    • Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome
    • Weber M, Hellmann I, Stadler MB, Ramos L, Paabo S, Rebhan M, Schubeler D (2007) Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome. Nat Genet 39:457-466
    • (2007) Nat Genet , vol.39 , pp. 457-466
    • Weber, M.1    Hellmann, I.2    Stadler, M.B.3    Ramos, L.4    Paabo, S.5    Rebhan, M.6    Schubeler, D.7
  • 102
    • 33746641324 scopus 로고    scopus 로고
    • Nucleosome displacement in transcription
    • Workman JL (2006) Nucleosome displacement in transcription. Genes Dev 20:2009-2017
    • (2006) Genes Dev , vol.20 , pp. 2009-2017
    • Workman, J.L.1
  • 103
    • 4744354406 scopus 로고    scopus 로고
    • Genome-wide transcriptome mapping analysis identifies organ-specific gene expression patterns along human chromosomes
    • Yamashita T, Honda M, Takatori H, Nishino R, Hoshino N, Kaneko S (2004) Genome-wide transcriptome mapping analysis identifies organ-specific gene expression patterns along human chromosomes. Genomics 84:867-875
    • (2004) Genomics , vol.84 , pp. 867-875
    • Yamashita, T.1    Honda, M.2    Takatori, H.3    Nishino, R.4    Hoshino, N.5    Kaneko, S.6
  • 104
    • 38949130541 scopus 로고    scopus 로고
    • Molecular landscape of modified histones in Drosophila heterochromatic genes and euchromatin-heterochromatin transition zones
    • Yasuhara JC, Wakimoto BT (2008) Molecular landscape of modified histones in Drosophila heterochromatic genes and euchromatin-heterochromatin transition zones. PLoS Genet 4:e16
    • (2008) PLoS Genet , vol.4
    • Yasuhara, J.C.1    Wakimoto, B.T.2
  • 105
    • 34249858233 scopus 로고    scopus 로고
    • Identifying clusters of functionally related genes in genomes
    • Yi G, Sze SH, Thon MR (2007) Identifying clusters of functionally related genes in genomes. Bioinformatics (Oxford, England) 23:1053-1060
    • (2007) Bioinformatics (Oxford, England) , vol.23 , pp. 1053-1060
    • Yi, G.1    Sze, S.H.2    Thon, M.R.3
  • 106
    • 33644871314 scopus 로고    scopus 로고
    • Islands of co-expressed neighbouring genes in Arabidopsis thaliana suggest higher-order chromosome domains
    • Zhan S, Horrocks J, Lukens LN (2006) Islands of co-expressed neighbouring genes in Arabidopsis thaliana suggest higher-order chromosome domains. Plant J 45:347-357
    • (2006) Plant J , vol.45 , pp. 347-357
    • Zhan, S.1    Horrocks, J.2    Lukens, L.N.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.