메뉴 건너뛰기




Volumn 29, Issue 15, 2008, Pages 2543-2564

Additive empirical force field for hexopyranose monosaccharides

Author keywords

Carbohydrate; CHARMM; Force field; Galactose; Glucose; Molecular dynamics; Molecular mechanics; Pyranose

Indexed keywords

ANOMERS; AQUEOUS SOLVATIONS; AQUEOUS SYSTEMS; BIOMOLECULAR; CHARMM; CONFORMATIONAL ENERGIES; CRYSTAL GEOMETRIES; CRYSTAL UNIT CELL DIMENSIONS; DIASTEREOMERS; DYNAMIC PROPERTIES; EMPIRICAL FORCES; EXPERIMENTAL VALUES; FORCE FIELD; FORCE FIELDS; GALACTOSE; HEATS OF VAPORIZATIONS; HETEROGENEOUS SYSTEMS; MODEL COMPOUNDS; MOLECULAR VOLUMES; MOLECULE MODELS; NEW PARAMETERS; PARAMETRIZATION; PHASE PROPERTIES; PYRANOSE; RING PUCKERS; VIBRATIONAL FREQUENCIES; WATER INTERACTIONS;

EID: 55349124614     PISSN: 01928651     EISSN: 1096987X     Source Type: Journal    
DOI: 10.1002/jcc.21004     Document Type: Article
Times cited : (476)

References (90)
  • 3
    • 33845244172 scopus 로고    scopus 로고
    • Best Pract Res Clin Endoc
    • Sesti, G. Best Pract Res Clin Endoc Metab 2006, 20, 665.
    • (2006) Metab , vol.20 , pp. 665
    • Sesti, G.1
  • 14
    • 0029874823 scopus 로고    scopus 로고
    • Senderowitz, H.; Parish, C.; Still, W. C. J Am Chem Soc 1996, 118, 2078.
    • Senderowitz, H.; Parish, C.; Still, W. C. J Am Chem Soc 1996, 118, 2078.
  • 26
    • 6344260593 scopus 로고    scopus 로고
    • MacKerell, A. D., Jr.; Wiórkiewicz-Kuczera, J.; Karplus, M. J Am ChemSoc 1995, 117, 11946.
    • MacKerell, A. D., Jr.; Wiórkiewicz-Kuczera, J.; Karplus, M. J Am ChemSoc 1995, 117, 11946.
  • 34
    • 15744368593 scopus 로고    scopus 로고
    • Klauda, J. B.; Brooks, B. R.; MacKerell, A. D., Jr.; Venable, R. M.; Pastor, R. W. J Phys Chem B 2005, 109, 5300.
    • Klauda, J. B.; Brooks, B. R.; MacKerell, A. D., Jr.; Venable, R. M.; Pastor, R. W. J Phys Chem B 2005, 109, 5300.
  • 35
    • 0035845496 scopus 로고    scopus 로고
    • Kirschner, K. N.; Woods, R. J. Proc Natl Acad Sci USA 2001, 98, 10541.
    • Kirschner, K. N.; Woods, R. J. Proc Natl Acad Sci USA 2001, 98, 10541.
  • 42
    • 84962345519 scopus 로고    scopus 로고
    • Kelly, C. P.; Cramer, C. J.; Truhlar, D. G. J Chem Theory Comput 2005, 1, 1133.
    • Kelly, C. P.; Cramer, C. J.; Truhlar, D. G. J Chem Theory Comput 2005, 1, 1133.
  • 43
    • 55349121996 scopus 로고    scopus 로고
    • Available at:, 2005
    • NIST Chemistry WebBook. Available at: http://webbook.nist.gov/ chemistry, 2005.
  • 69
    • 0002433133 scopus 로고
    • In The Crystals; Luckhurst, G. R, Veracini, C. A, Eds, Kluwer Academic Publishers: The Netherlands
    • Pastor, R. W. In The Molecular Dynamics of Liquid Crystals; Luckhurst, G. R.; Veracini, C. A., Eds.; Kluwer Academic Publishers: The Netherlands, 1994; pp 85-138.
    • (1994) Molecular Dynamics of Liquid , pp. 85-138
    • Pastor, R.W.1
  • 71
    • 0009518059 scopus 로고    scopus 로고
    • Becker, O. M, MacKerell, A. D. Jr, Roux, B, Watanabe, M, Eds, Marcel Deckker: New York
    • Straub, J. E. In Computational Biochemistry and Biophysics; Becker, O. M.; MacKerell, A. D. Jr.; Roux, B.; Watanabe, M., Eds.; Marcel Deckker: New York, 2001; pp 199-220.
    • (2001) Computational Biochemistry and Biophysics , pp. 199-220
    • Straub, J.E.1
  • 73
    • 0035818094 scopus 로고    scopus 로고
    • Bogusz, S.; Venable, R. M.; Pastor, R. W. J Phys Chem B 2001, 105,8312.
    • Bogusz, S.; Venable, R. M.; Pastor, R. W. J Phys Chem B 2001, 105,8312.
  • 74
    • 55349127207 scopus 로고    scopus 로고
    • Frisch, M. J, Trucks, G. W, Schlegel, H. B, Scuseria, G. E, Robb, M. A, Cheeseman, J. R, Montgomery, J. A, Vreven T, Jr, Kudin, K. N, Burant, J. C, Millam, J. M, Iyengar, S. S, Tomasi, J, Barone, V, Mennucci, B, Cossi, M, Scalmani, G, Rega, N, Petersson, G. A, Nakatsuji, H, Hada, M, Ehara, M, Toyota, K, Fukuda, R, Hasegawa, J, Tshida, M, Nakajima, T, Honda, K, Kitao, O, Nakai, H, Kiene, M, Li, T. W, Knox, J. E, Hratchian, H. P, Cross, J. B, Adamo, C, Jaramillo, J, Gomperts, R, Stratmann, R. E, Yazyev, O, Austin, A. J, Cammi, R, Pomelli, C, Ochterski, J. W, Ayala, P. Y, Morokuma, K, Voth, G. A, Salvador, P, Dannenberg, J. J, Zakrzewski, V. G, Dapprich, S, Daniels, A. D, Strain, M. C, Farkas, O, Malick, D. K, Rabuck, A. D, Raghavachari, K, Foresman, J. B, Ortiz, J. V, Cui, Q, Baboul, A. G, Clifford, S, Cioslowski, J, Stefanov, B. B, Liu, G, Liashenko, A, Piskorz, P, Komaromi, I, Martin, R. L, Fox, D. J, Keith, T, Al
    • Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Montgomery, J. A.; Vreven T., Jr.; Kudin, K. N.; Burant, J. C.; Millam, J. M.; Iyengar, S. S.; Tomasi, J.; Barone, V.; Mennucci, B.; Cossi, M.; Scalmani, G.; Rega, N.; Petersson, G. A.; Nakatsuji, H.; Hada, M.; Ehara, M.; Toyota, K.; Fukuda, R.; Hasegawa, J.; Tshida, M.; Nakajima, T.; Honda, K.; Kitao, O.; Nakai, H.; Kiene, M.; Li, T. W.; Knox, J. E.; Hratchian, H. P.; Cross, J. B.; Adamo, C.; Jaramillo, J.; Gomperts, R.; Stratmann, R. E.; Yazyev, O.; Austin, A. J.; Cammi, R.; Pomelli, C.; Ochterski, J. W.; Ayala, P. Y.; Morokuma, K.; Voth, G. A.; Salvador, P.; Dannenberg, J. J.; Zakrzewski, V. G.; Dapprich, S.; Daniels, A. D.; Strain, M. C.; Farkas, O.; Malick, D. K.; Rabuck, A. D.; Raghavachari, K.; Foresman, J. B.; Ortiz, J. V.; Cui, Q.; Baboul, A. G.; Clifford, S.; Cioslowski, J.; Stefanov, B. B.; Liu, G.; Liashenko, A.; Piskorz, P.; Komaromi, I.; Martin, R. L.; Fox, D. J.; Keith, T.; Al-Laham, M. A.; Peng, C. Y.; Nanayakkara, A.; Challacombe, M.; Gill, P. M. W.; Johnson, B.; Chen, W.; Wong, M. W.; Gonzalez, C.; Pople, J. A.; Gaussian; Pittsburgh, 2003.
  • 80
    • 0000432120 scopus 로고
    • Alder, B, Fernbach, S, Rotenberg, M, Eds, Academic Press: New York
    • Hockney, R. W. In Methods in Computational Physics; Alder, B.; Fernbach, S.; Rotenberg, M., Eds.; Academic Press: New York, 1970; pp 136-211.
    • (1970) Methods in Computational Physics , pp. 136-211
    • Hockney, R.W.1
  • 82
  • 90
    • 55349147500 scopus 로고    scopus 로고
    • Grossfleld, A. WHAM: An Implementation of the Weighted Histogram Analysis Method. Available at: http://dasher.wustl.edu/alan/ wham, 2003.
    • Grossfleld, A. WHAM: An Implementation of the Weighted Histogram Analysis Method. Available at: http://dasher.wustl.edu/alan/ wham, 2003.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.