-
1
-
-
34548442991
-
Coordinating TLR-activated signaling pathways in cells of the immune system
-
Banerjee, A., and S. Gerondakis. 2007. Coordinating TLR-activated signaling pathways in cells of the immune system. Immunol. Cell Biol. 85:420-424.
-
(2007)
Immunol. Cell Biol
, vol.85
, pp. 420-424
-
-
Banerjee, A.1
Gerondakis, S.2
-
2
-
-
34447557009
-
Innate immunogenetics: A tool for exploring new frontiers of host defence
-
Bochud, P., M. Bochud, A. Telent, and T. Calandra. 2007. Innate immunogenetics: a tool for exploring new frontiers of host defence. Lancet Infect. Dis. 7:531-542.
-
(2007)
Lancet Infect. Dis
, vol.7
, pp. 531-542
-
-
Bochud, P.1
Bochud, M.2
Telent, A.3
Calandra, T.4
-
3
-
-
0036668567
-
Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): Trends and problems
-
Bustin, S. A. 2002. Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems. J. Mol. Endocrinol. 29:23-39.
-
(2002)
J. Mol. Endocrinol
, vol.29
, pp. 23-39
-
-
Bustin, S.A.1
-
4
-
-
28344434302
-
Data analysis and interpretation
-
Stephen A. Bustin ed, International University Line Publishers, La Jolla, CA
-
Bustin, S. A., and T. Nolan. 2004. Data analysis and interpretation, p. 439-491. In Stephen A. Bustin (ed.), A-Z of quantitative PCR. International University Line Publishers, La Jolla, CA.
-
(2004)
A-Z of quantitative PCR
, pp. 439-491
-
-
Bustin, S.A.1
Nolan, T.2
-
5
-
-
1542329628
-
Evaluation of the rrn operon copy in Bifidobacterium using real-time PCR
-
Candela, M., B. Vitali, D. Matteuzzi, and P. Brigidi. 2004. Evaluation of the rrn operon copy in Bifidobacterium using real-time PCR. Lett. Appl. Microbiol. 38:229-232.
-
(2004)
Lett. Appl. Microbiol
, vol.38
, pp. 229-232
-
-
Candela, M.1
Vitali, B.2
Matteuzzi, D.3
Brigidi, P.4
-
6
-
-
34547795116
-
Current and future uses of real-time polymerase chain reaction and microarrays in the study of intestinal microbiota, and probiotic use and effectiveness
-
Carey, C. M., J. L. Kirk, S. Ojha, and M. Kostrzynska. 2007. Current and future uses of real-time polymerase chain reaction and microarrays in the study of intestinal microbiota, and probiotic use and effectiveness. Can. J. Microbiol. 53:537-550.
-
(2007)
Can. J. Microbiol
, vol.53
, pp. 537-550
-
-
Carey, C.M.1
Kirk, J.L.2
Ojha, S.3
Kostrzynska, M.4
-
7
-
-
0037126643
-
Comparison of partial tuf gene sequences for the identification of lactobacilli
-
Chavagnat, F., M. Haueter, J. Jimeno, and M. G. Casey. 2002. Comparison of partial tuf gene sequences for the identification of lactobacilli. FEMS Microbiol. Lett. 217:177-183.
-
(2002)
FEMS Microbiol. Lett
, vol.217
, pp. 177-183
-
-
Chavagnat, F.1
Haueter, M.2
Jimeno, J.3
Casey, M.G.4
-
8
-
-
2942566292
-
Identification of key immune mediators regulating T helper 1 responses in swine
-
Dawson, H. D., A. R. Royaee, S. Nishi, D. Kuhar, W. M. Schnitzlein, F. Zuckermann, J. Urban, Jr., and J. K. Lunney. 2004. Identification of key immune mediators regulating T helper 1 responses in swine. Vet. Immunol. Immunopathol. 100:105-111.
-
(2004)
Vet. Immunol. Immunopathol
, vol.100
, pp. 105-111
-
-
Dawson, H.D.1
Royaee, A.R.2
Nishi, S.3
Kuhar, D.4
Schnitzlein, W.M.5
Zuckermann, F.6
Urban Jr., J.7
Lunney, J.K.8
-
9
-
-
19944432576
-
-
Dawson, H. D., E. Beshah, S. Nishi, G. Solano-Aguilar, M. Morimoto, A. Zhao, K. B. Madden, T. K. Ledbetter, J. P. Dubey, T. Shea-Donohue, J. K. Lunney, and J. Urban, Jr. 2005. Localized multigene expression patterns support an evolving Th1/Th2-like paradigm in response to infections with Toxoplasma gondii and Ascaris suum. Infect. Immun. 73:1116-1128.
-
Dawson, H. D., E. Beshah, S. Nishi, G. Solano-Aguilar, M. Morimoto, A. Zhao, K. B. Madden, T. K. Ledbetter, J. P. Dubey, T. Shea-Donohue, J. K. Lunney, and J. Urban, Jr. 2005. Localized multigene expression patterns support an evolving Th1/Th2-like paradigm in response to infections with Toxoplasma gondii and Ascaris suum. Infect. Immun. 73:1116-1128.
-
-
-
-
10
-
-
53949120234
-
-
Delroisse, J. M., A. L. Boulvin, I. Parmentier, R. D. Dauphin, M. Vandenbol, and D. Portetelle. 2006. Quantification of Bifidobacterium spp. and Lactobacillus spp. in rat fecal samples by real-time PCR. Microbiol. Res. doi: 10.1016/j.micres.2006.09.004.
-
Delroisse, J. M., A. L. Boulvin, I. Parmentier, R. D. Dauphin, M. Vandenbol, and D. Portetelle. 2006. Quantification of Bifidobacterium spp. and Lactobacillus spp. in rat fecal samples by real-time PCR. Microbiol. Res. doi: 10.1016/j.micres.2006.09.004.
-
-
-
-
11
-
-
36348987668
-
Maternal breast-milk and intestinal bifidobacteria guide the compositional development of the Bifidobacterium microbiota in infants at risk of allergic disease
-
Grönlund, M.-M., M. Gueimonde, K. Laitinen, G. Kociubinski, T. Grönroos, S. Salminen, and E. Isolauri. 2007. Maternal breast-milk and intestinal bifidobacteria guide the compositional development of the Bifidobacterium microbiota in infants at risk of allergic disease. Clin. Exp. Allergy 37:1764-1772.
-
(2007)
Clin. Exp. Allergy
, vol.37
, pp. 1764-1772
-
-
Grönlund, M.-M.1
Gueimonde, M.2
Laitinen, K.3
Kociubinski, G.4
Grönroos, T.5
Salminen, S.6
Isolauri, E.7
-
12
-
-
33646098415
-
Quantitative real-time PCR analysis of fecal Lactobacillus species in infants receiving a probiotic infant formula
-
Haarman, M., and J. Knol. 2006. Quantitative real-time PCR analysis of fecal Lactobacillus species in infants receiving a probiotic infant formula. Appl. Environ. Microbiol. 72:2359-2365.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 2359-2365
-
-
Haarman, M.1
Knol, J.2
-
13
-
-
29144533433
-
Enzymatic ability of Bifidobacterium animalis subsp. lactis to hydrolyze milk proteins: Identification and characterization of endopeptidase O
-
Janer, C., F. Arigoni, B. H. Lee, C. Peláez, and T. Requena. 2005. Enzymatic ability of Bifidobacterium animalis subsp. lactis to hydrolyze milk proteins: identification and characterization of endopeptidase O. Appl. Environ. Microbiol. 71:8460-8465.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 8460-8465
-
-
Janer, C.1
Arigoni, F.2
Lee, B.H.3
Peláez, C.4
Requena, T.5
-
14
-
-
0034807791
-
New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences
-
Jian, W., L. Zhu, and X. Doug. 2001. New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences. Int. J. Syst. Evol. Microbiol. 51:1633-1638.
-
(2001)
Int. J. Syst. Evol. Microbiol
, vol.51
, pp. 1633-1638
-
-
Jian, W.1
Zhu, L.2
Doug, X.3
-
15
-
-
0142056852
-
Probiotics: Isolated bacteria strain or mixtures of different strains? Two different approaches in the use of probiotics as therapeutics
-
Karimi, O., and A. S. Pena. 2003. Probiotics: isolated bacteria strain or mixtures of different strains? Two different approaches in the use of probiotics as therapeutics. Drugs Today 39:565-597.
-
(2003)
Drugs Today
, vol.39
, pp. 565-597
-
-
Karimi, O.1
Pena, A.S.2
-
16
-
-
23944479421
-
Lessons from the genomes of bifidobacteria
-
Klijn, A., A. Mercenier, and F. Arigoni. 2005. Lessons from the genomes of bifidobacteria. FEMS Microbiol. Rev. 29:491-509.
-
(2005)
FEMS Microbiol. Rev
, vol.2
, Issue.9
, pp. 491-509
-
-
Klijn, A.1
Mercenier, A.2
Arigoni, F.3
-
17
-
-
0030774468
-
Evaluation of using a short region of the recA gene for rapid and sensitive speciation of dominant bifidobacteria in the human large intestine
-
Kullen, M. J., L. J. Brady, and D. J. O'Sullivan. 1997. Evaluation of using a short region of the recA gene for rapid and sensitive speciation of dominant bifidobacteria in the human large intestine. FEMS Microbiol. Lett. 154:377-383.
-
(1997)
FEMS Microbiol. Lett
, vol.154
, pp. 377-383
-
-
Kullen, M.J.1
Brady, L.J.2
O'Sullivan, D.J.3
-
18
-
-
41349106548
-
TLR9 as a key receptor for the recognition of DNA
-
Kumagai, Y., O. Takeuchi, and S. Akira. 2008. TLR9 as a key receptor for the recognition of DNA. Adv. Drug Deliv. Rev. 60:795-804.
-
(2008)
Adv. Drug Deliv. Rev
, vol.60
, pp. 795-804
-
-
Kumagai, Y.1
Takeuchi, O.2
Akira, S.3
-
19
-
-
23744462797
-
Rapid identification of potentially probiotic Bifidobacterium species by multiplex PCR using species specific primers based on the region extending from 16S rRNA through 23S rRNA
-
Kwon, H. S., E. H. Yang, S. H. Lee, S. W. Yeon, B. H. Kang, and T. Y. Kim. 2005. Rapid identification of potentially probiotic Bifidobacterium species by multiplex PCR using species specific primers based on the region extending from 16S rRNA through 23S rRNA. FEMS Microbiol. Lett. 250:55-62.
-
(2005)
FEMS Microbiol. Lett
, vol.250
, pp. 55-62
-
-
Kwon, H.S.1
Yang, E.H.2
Lee, S.H.3
Yeon, S.W.4
Kang, B.H.5
Kim, T.Y.6
-
20
-
-
33749031001
-
Homeostatic effects of TLR9 signaling in experimental colitis
-
Lee, J., D. Rachmilewitz, and E. Raz. 2006. Homeostatic effects of TLR9 signaling in experimental colitis. Ann. N. Y. Acad. Sci. 1072:351-355.
-
(2006)
Ann. N. Y. Acad. Sci
, vol.1072
, pp. 351-355
-
-
Lee, J.1
Rachmilewitz, D.2
Raz, E.3
-
21
-
-
33751551466
-
Maintenance of colonic homeostasis by distinctive apical TLR9 signalling in intestinal epithelial cells
-
Lee, J., J. Mo, K. Katakura, I. Alkalay, A. N. Rucker, Y. Liu, H. Lee, C. Shen, G. Cojocaru, S. Shenouda, M. Kagnoff, L. Eckmann, Y. Ben-Neriah, and E. Raz. 2006. Maintenance of colonic homeostasis by distinctive apical TLR9 signalling in intestinal epithelial cells. Nat. Cell Biol. 8:1327-1336.
-
(2006)
Nat. Cell Biol
, vol.8
, pp. 1327-1336
-
-
Lee, J.1
Mo, J.2
Katakura, K.3
Alkalay, I.4
Rucker, A.N.5
Liu, Y.6
Lee, H.7
Shen, C.8
Cojocaru, G.9
Shenouda, S.10
Kagnoff, M.11
Eckmann, L.12
Ben-Neriah, Y.13
Raz, E.14
-
22
-
-
33845284823
-
Toll-like receptor signaling in intestinal epithelial cells contributes to colonic homeostasis
-
Lee, J., J. Mo, C. Shen, A. N. Rucker, and E. Raz. 2007. Toll-like receptor signaling in intestinal epithelial cells contributes to colonic homeostasis. Curr. Opin. Gastroenterol. 23:27-31.
-
(2007)
Curr. Opin. Gastroenterol
, vol.23
, pp. 27-31
-
-
Lee, J.1
Mo, J.2
Shen, C.3
Rucker, A.N.4
Raz, E.5
-
23
-
-
4344573091
-
Polyphasic taxonomic analysis of Bifidobacterium animalis and Bifidobacterium lactis reveals relatedness at the subspecies level: Reclassification of Bifidobacterium animalis as Bifidobacterium animalis subsp. animalis subsp. nov. and Bifidobacterium lactis as Bifidobacterium animalis subsp. lactis subsp. nov
-
Masco, L., M. Ventura, R. Zink, G. Huys, and J. Swings. 2004. Polyphasic taxonomic analysis of Bifidobacterium animalis and Bifidobacterium lactis reveals relatedness at the subspecies level: reclassification of Bifidobacterium animalis as Bifidobacterium animalis subsp. animalis subsp. nov. and Bifidobacterium lactis as Bifidobacterium animalis subsp. lactis subsp. nov. Int. J. Syst. Evol. Microbiol. 54:1137-1143.
-
(2004)
Int. J. Syst. Evol. Microbiol
, vol.54
, pp. 1137-1143
-
-
Masco, L.1
Ventura, M.2
Zink, R.3
Huys, G.4
Swings, J.5
-
24
-
-
21244451548
-
Culture dependent and culture independent qualitative analysis of probiotic products claimed to contain bifidobacteria
-
Masco, L., G. Huys, E. De Brandt, R. Temmerman, and J. Swings. 2005. Culture dependent and culture independent qualitative analysis of probiotic products claimed to contain bifidobacteria. Int. J. Food Microbiol. 102:221-230.
-
(2005)
Int. J. Food Microbiol
, vol.102
, pp. 221-230
-
-
Masco, L.1
Huys, G.2
De Brandt, E.3
Temmerman, R.4
Swings, J.5
-
25
-
-
0141524105
-
Genus- and species-specific PCR primers for the detection and identification of bifidobacteria
-
Matsuki, T., K. Watanabe, and R. Tanaka. 2003. Genus- and species-specific PCR primers for the detection and identification of bifidobacteria. Curr. Issues Intest. Microbiol. 4:61-69.
-
(2003)
Curr. Issues Intest. Microbiol
, vol.4
, pp. 61-69
-
-
Matsuki, T.1
Watanabe, K.2
Tanaka, R.3
-
26
-
-
0036709739
-
Application of molecular biological methods for studying probiotics and the gut flora
-
McCartney, A. L. 2002. Application of molecular biological methods for studying probiotics and the gut flora. Br. J. Nutr. 88:S29-S37.
-
(2002)
Br. J. Nutr
, vol.88
-
-
McCartney, A.L.1
-
27
-
-
0031056257
-
Bifidobacterium lactis. sp. nov., a moderately oxygen tolerant species isolated from fermented milk
-
Meile, L., W. Ludwig, U. Rueger, C. Gut, P. Kaufmann, G. Dasen, S. Wenger, and M. Teuber. 1997. Bifidobacterium lactis. sp. nov., a moderately oxygen tolerant species isolated from fermented milk. Syst. Appl. Microbiol. 20:57-64.
-
(1997)
Syst. Appl. Microbiol
, vol.20
, pp. 57-64
-
-
Meile, L.1
Ludwig, W.2
Rueger, U.3
Gut, C.4
Kaufmann, P.5
Dasen, G.6
Wenger, S.7
Teuber, M.8
-
28
-
-
0031790825
-
Phylogenetic analysis of the genus Bifidobacterium and related genera based on 16S rDNA sequences
-
Miyake, T., K. Wanatabe, T. Wanatabe, and H. Oyaizu. 1998. Phylogenetic analysis of the genus Bifidobacterium and related genera based on 16S rDNA sequences. Microbiol. Immunol. 42:661-667.
-
(1998)
Microbiol. Immunol
, vol.42
, pp. 661-667
-
-
Miyake, T.1
Wanatabe, K.2
Wanatabe, T.3
Oyaizu, H.4
-
29
-
-
0036146824
-
Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set
-
Nadkarni, M. A., E. F. Martin, N. A. Jacques, and N. Hunter. 2002. Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set. Microbiology 148:257-266.
-
(2002)
Microbiology
, vol.148
, pp. 257-266
-
-
Nadkarni, M.A.1
Martin, E.F.2
Jacques, N.A.3
Hunter, N.4
-
31
-
-
26244448900
-
Phylogeny of the Enterobacteriaceae based on genes encoding elongation factor Tu and F-ATPase β-subunit
-
Paradis, S., M. Boissinot, N. Paquette, S. D. Belanger, E. Martel, D. K. Boudreau, F. J. Picard, M. Ouellette, P. H. Roy, and M. G. Bergeron. 2005. Phylogeny of the Enterobacteriaceae based on genes encoding elongation factor Tu and F-ATPase β-subunit. Int. J. Syst. Evol. Microbiol. 55:2013-2025.
-
(2005)
Int. J. Syst. Evol. Microbiol
, vol.55
, pp. 2013-2025
-
-
Paradis, S.1
Boissinot, M.2
Paquette, N.3
Belanger, S.D.4
Martel, E.5
Boudreau, D.K.6
Picard, F.J.7
Ouellette, M.8
Roy, P.H.9
Bergeron, M.G.10
-
33
-
-
3843071047
-
Use of the tuf sequences for genus-specific PCR detection and phylogenetic analysis of 28 streptococcal species
-
Picard, F. J., K. Danbing, D. K. Boudreau, M. Boissinot, A. Huletsky, D. Richard, M. Ouellette, P. H. Roy, and M. G. Bergeron. 2004. Use of the tuf sequences for genus-specific PCR detection and phylogenetic analysis of 28 streptococcal species. J. Clin. Microbiol. 42:3686-3695.
-
(2004)
J. Clin. Microbiol
, vol.42
, pp. 3686-3695
-
-
Picard, F.J.1
Danbing, K.2
Boudreau, D.K.3
Boissinot, M.4
Huletsky, A.5
Richard, D.6
Ouellette, M.7
Roy, P.H.8
Bergeron, M.G.9
-
34
-
-
0342744954
-
Selection and characterisation of Lactobacillus and Bifidobacterium strains for use as probiotics
-
Prasad, J., H. Gill, J. Smart, and P. K. Gopal. 1998. Selection and characterisation of Lactobacillus and Bifidobacterium strains for use as probiotics. Int. Dairy J. 8:993-1002.
-
(1998)
Int. Dairy J
, vol.8
, pp. 993-1002
-
-
Prasad, J.1
Gill, H.2
Smart, J.3
Gopal, P.K.4
-
35
-
-
0036254875
-
Identification, detection, and enumeration of human Bifidobacterium species by PCR targeting the transaldolase gene
-
Requena, T., J. Burton, T. Matsuki, K. Munro, M. A. Simon, R. Tanaka, K. Watanabe, and G. Tannock. 2002. Identification, detection, and enumeration of human Bifidobacterium species by PCR targeting the transaldolase gene. Appl. Environ. Microbiol. 68:2420-2427.
-
(2002)
Appl. Environ. Microbiol
, vol.68
, pp. 2420-2427
-
-
Requena, T.1
Burton, J.2
Matsuki, T.3
Munro, K.4
Simon, M.A.5
Tanaka, R.6
Watanabe, K.7
Tannock, G.8
-
36
-
-
34347263800
-
Use of probiotics in pediatrics: Rationale, mechanisms of action, and practical aspects
-
Saavedra, J. M. 2007. Use of probiotics in pediatrics: rationale, mechanisms of action, and practical aspects. Nutr. Clin. Pract. 22:351-365.
-
(2007)
Nutr. Clin. Pract
, vol.22
, pp. 351-365
-
-
Saavedra, J.M.1
-
37
-
-
1342328586
-
Long-term consumption of infant formulas containing live probiotic bacteria: Tolerance and safety
-
Saavedra, J. M., A. Abi-Hanna, N. Moore, and R. H. Yolken. 2004. Long-term consumption of infant formulas containing live probiotic bacteria: tolerance and safety. Am. J. Clin. Nutr. 79:261-267.
-
(2004)
Am. J. Clin. Nutr
, vol.79
, pp. 261-267
-
-
Saavedra, J.M.1
Abi-Hanna, A.2
Moore, N.3
Yolken, R.H.4
-
38
-
-
31344467094
-
Characterization of the genus Bifidobacterium by automated ribotyping and 16S rRNA gene sequences
-
Sakata, S., C. S. Ryu, M. Kitahara, M. Sakamoto, M. Hayashi, M. Fukuyama, and Y. Benno. 2006. Characterization of the genus Bifidobacterium by automated ribotyping and 16S rRNA gene sequences. Microbiol. Immunol. 50:1-10.
-
(2006)
Microbiol. Immunol
, vol.50
, pp. 1-10
-
-
Sakata, S.1
Ryu, C.S.2
Kitahara, M.3
Sakamoto, M.4
Hayashi, M.5
Fukuyama, M.6
Benno, Y.7
-
39
-
-
0345293356
-
Molecular approaches for the detection and identification of bifidobacteria and lactobacilli in the human gastrointestinal tract
-
Satokari, R. M., E. E. Vaughan, H. Smidt, M. Saarela, J. Matto, and V. M. de Vos. 2003. Molecular approaches for the detection and identification of bifidobacteria and lactobacilli in the human gastrointestinal tract. Syst. Appl. Microbiol. 26:572-584.
-
(2003)
Syst. Appl. Microbiol
, vol.26
, pp. 572-584
-
-
Satokari, R.M.1
Vaughan, E.E.2
Smidt, H.3
Saarela, M.4
Matto, J.5
de Vos, V.M.6
-
40
-
-
17044381357
-
Probiotic and other functional microbes: From markets to mechanisms
-
Saxelin, M., S. Tynkkynen, T. Mattila-Sandholm, and W. M. de Vos. 2005. Probiotic and other functional microbes: from markets to mechanisms. Curr. Opin. Biotechnol. 16:204-211.
-
(2005)
Curr. Opin. Biotechnol
, vol.16
, pp. 204-211
-
-
Saxelin, M.1
Tynkkynen, S.2
Mattila-Sandholm, T.3
de Vos, W.M.4
-
41
-
-
0015956349
-
Bifidobacterium animalis (Mitsuoka) comb. nov. and the "minimum" and "subtile" groups of new bifidobacteria found in sewage
-
Scardovi, V., and L. D. Trovatelli. 1974. Bifidobacterium animalis (Mitsuoka) comb. nov. and the "minimum" and "subtile" groups of new bifidobacteria found in sewage. Int. J. Syst. Bacteriol. 24:21-28.
-
(1974)
Int. J. Syst. Bacteriol
, vol.24
, pp. 21-28
-
-
Scardovi, V.1
Trovatelli, L.D.2
-
42
-
-
0037191058
-
Limited effect of recombinant porcine interleukin-12 on porcine lymphocytes due to a low level of IL-12 beta2 receptor
-
Solano-Aguilar, G. I., E. Beshah, K. Vengroski, L. Gasbarre, D. Junker, M. Cochran, C. Weston, D. Valencia, C. Chiang, H. D. Dawson, J. F. Urban, and J. K. Lunney. 2002. Limited effect of recombinant porcine interleukin-12 on porcine lymphocytes due to a low level of IL-12 beta2 receptor. Vet. Immunol. Immunopathol. 89:133-148.
-
(2002)
Vet. Immunol. Immunopathol
, vol.89
, pp. 133-148
-
-
Solano-Aguilar, G.I.1
Beshah, E.2
Vengroski, K.3
Gasbarre, L.4
Junker, D.5
Cochran, M.6
Weston, C.7
Valencia, D.8
Chiang, C.9
Dawson, H.D.10
Urban, J.F.11
Lunney, J.K.12
-
43
-
-
0032755259
-
Direct analysis of the genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut
-
Suau, A., R. Bonnet, M. Sutren, J. J. Godon, G. R. Gibson, M. D. Collins, and J. Dore. 1999. Direct analysis of the genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut. Appl. Environ. Microbiol. 65:4799-4807.
-
(1999)
Appl. Environ. Microbiol
, vol.65
, pp. 4799-4807
-
-
Suau, A.1
Bonnet, R.2
Sutren, M.3
Godon, J.J.4
Gibson, G.R.5
Collins, M.D.6
Dore, J.7
-
44
-
-
0031574072
-
The Clustal_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The Clustal_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
45
-
-
33845363285
-
Toll-like receptor 2 and 9 are expressed and functional in gut associated lymphoid tissues of presuckling newborn swine
-
Tohno, M., T. Shimosato, M. Moue, H. Aso, K. Watanabe, Y. Kawai, T. Yamaguchi, T. Saito, and H. Kitazawa. 2006. Toll-like receptor 2 and 9 are expressed and functional in gut associated lymphoid tissues of presuckling newborn swine. Vet. Res. 37:791-812.
-
(2006)
Vet. Res
, vol.37
, pp. 791-812
-
-
Tohno, M.1
Shimosato, T.2
Moue, M.3
Aso, H.4
Watanabe, K.5
Kawai, Y.6
Yamaguchi, T.7
Saito, T.8
Kitazawa, H.9
-
46
-
-
0036952608
-
Rapid identification, differentiation and proposed new taxonomic classification of Bifidobacterium lactis
-
Ventura, M., and R. Zink. 2002. Rapid identification, differentiation and proposed new taxonomic classification of Bifidobacterium lactis. Appl. Environ. Microbiol. 68:6429-6434.
-
(2002)
Appl. Environ. Microbiol
, vol.68
, pp. 6429-6434
-
-
Ventura, M.1
Zink, R.2
-
47
-
-
2142745366
-
Comparative sequence analysis of the tuf and recA genes and restriction fragment length polymorphism of the internal transcribed spacer region sequences supply additional tools for discriminating Bifidobacterium lactis from Bifidobacterium animalis
-
Ventura, M., and R. Zink. 2003. Comparative sequence analysis of the tuf and recA genes and restriction fragment length polymorphism of the internal transcribed spacer region sequences supply additional tools for discriminating Bifidobacterium lactis from Bifidobacterium animalis. Appl. Environ. Microbiol. 69:7517-7522.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 7517-7522
-
-
Ventura, M.1
Zink, R.2
-
48
-
-
0242657388
-
Analysis, characterization, and loci of the tuf genes in Lactobacillus and Bifidobacterium species and their direct application for species identification
-
Ventura, M., C. Canchaya, V. Meylan, T. R. Klaenhammer, and R. Zink. 2003. Analysis, characterization, and loci of the tuf genes in Lactobacillus and Bifidobacterium species and their direct application for species identification. Appl. Environ. Microbiol. 69:6908-6922.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 6908-6922
-
-
Ventura, M.1
Canchaya, C.2
Meylan, V.3
Klaenhammer, T.R.4
Zink, R.5
-
49
-
-
8144219531
-
Characterization of the groEL and groES loci in Bifidobacterium breve UCC 2003: Genetic, transcriptional, and phylogenetic analyses
-
Ventura, M., C. Canchaya, R. Zink, G. F. Fitzgerald, and D. van Sinceren. 2004. Characterization of the groEL and groES loci in Bifidobacterium breve UCC 2003: genetic, transcriptional, and phylogenetic analyses. Appl. Environ. Microbiol. 70:6197-6209.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 6197-6209
-
-
Ventura, M.1
Canchaya, C.2
Zink, R.3
Fitzgerald, G.F.4
van Sinceren, D.5
-
50
-
-
12244311206
-
Gene structure and transcriptional organization of the dnaK operon of Bifidobacterium breve UCC 2003 and application of the operon in bifidobacterial tracing
-
Ventura, M., R. Zink, G. F. Fitzgerald, and D. van Sinderen. 2005. Gene structure and transcriptional organization of the dnaK operon of Bifidobacterium breve UCC 2003 and application of the operon in bifidobacterial tracing. Appl. Environ. Microbiol. 71:487-500.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 487-500
-
-
Ventura, M.1
Zink, R.2
Fitzgerald, G.F.3
van Sinderen, D.4
-
51
-
-
31044439147
-
The immunophysiological impact of bacterial CpG DNA on the gut
-
Watson, J. L., and D. M. McKay. 2006. The immunophysiological impact of bacterial CpG DNA on the gut. Clin. Chim. Acta 364:1-11.
-
(2006)
Clin. Chim. Acta
, vol.364
, pp. 1-11
-
-
Watson, J.L.1
McKay, D.M.2
-
52
-
-
19444371900
-
The gene encoding xylulose-5-phosphate/fructose-6-phosphate phosphoketolase (xfp) is conserved among Bifidobacterium species within a more variable region of the genome and both are useful for strain identification
-
Yin, X., J. R. Chambers, K. Barlow, A. S. Park, and R. Wheatcroft. 2005. The gene encoding xylulose-5-phosphate/fructose-6-phosphate phosphoketolase (xfp) is conserved among Bifidobacterium species within a more variable region of the genome and both are useful for strain identification. FEMS Microbiol. Lett. 246:251-257.
-
(2005)
FEMS Microbiol. Lett
, vol.246
, pp. 251-257
-
-
Yin, X.1
Chambers, J.R.2
Barlow, K.3
Park, A.S.4
Wheatcroft, R.5
-
53
-
-
37549007931
-
Evaluation of the PCR method for identification of Bifidobacterium species
-
Youn, S. Y., J. M. Seo, and G. E. Ji. 2008. Evaluation of the PCR method for identification of Bifidobacterium species. Lett. Appl. Microbiol. 46:7-13.
-
(2008)
Lett. Appl. Microbiol
, vol.46
, pp. 7-13
-
-
Youn, S.Y.1
Seo, J.M.2
Ji, G.E.3
-
54
-
-
0141725824
-
Species identification of genus Bifidobacterium based on partial HSP60 gene sequences and proposal of Bifidobacterium thermacidophilum subsp. porcinum subsp. nov
-
Zhu, L., and X. Dong. 2003. Species identification of genus Bifidobacterium based on partial HSP60 gene sequences and proposal of Bifidobacterium thermacidophilum subsp. porcinum subsp. nov. Int. J. Syst. Evol. Microbiol. 53:1619-1623.
-
(2003)
Int. J. Syst. Evol. Microbiol
, vol.53
, pp. 1619-1623
-
-
Zhu, L.1
Dong, X.2
-
55
-
-
0942279586
-
Molecular ecological analysis of the gastrointestinal microbiota: A review
-
Zoetendal, E. G., C. T. Collier, S. Koike, R. I. Mackie, and H. R. Gaskins. 2004. Molecular ecological analysis of the gastrointestinal microbiota: a review. J. Nutr. 134:465-472.
-
(2004)
J. Nutr
, vol.134
, pp. 465-472
-
-
Zoetendal, E.G.1
Collier, C.T.2
Koike, S.3
Mackie, R.I.4
Gaskins, H.R.5
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