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Volumn 46, Issue 1, 2008, Pages 7-13

Evaluation of the PCR method for identification of Bifidobacterium species

Author keywords

Bifidobacterium; Enterobacterial repetitive intergenic consensus; Intergenic spacer region; PCR; Ribosomal DNA

Indexed keywords

DNA SEQUENCES; PROBIOTICS;

EID: 37549007931     PISSN: 02668254     EISSN: 1472765X     Source Type: Journal    
DOI: 10.1111/j.1472-765X.2007.02263.x     Document Type: Article
Times cited : (27)

References (22)
  • 1
    • 0003358703 scopus 로고
    • Ecology of bifidobacteria
    • In. ed. Bezkorovainy, A. Miller-Catchpole, R. pp. Florida: CRC Press.
    • Bezkorovainy, A. (1989) Ecology of bifidobacteria. In Biochemistry and Physiology of Bifidobacteria ed. Bezkorovainy, A. Miller-Catchpole, R. pp. 29 72 Florida : CRC Press.
    • (1989) Biochemistry and Physiology of Bifidobacteria , pp. 29-72
    • Bezkorovainy, A.1
  • 2
    • 0027745555 scopus 로고
    • Specificity, efficiency, and fidelity of PCR
    • Cha, R.S. Thilly, W.G. (1993) Specificity, efficiency, and fidelity of PCR. PCR Methods Appl 3, 18 29.
    • (1993) PCR Methods Appl , vol.3 , pp. 18-29
    • Cha, R.S.1    Thilly, W.G.2
  • 3
    • 0037338553 scopus 로고    scopus 로고
    • Conventional methods versus 16S ribosomal DNA sequencing for identification of nontuberculous mycobacteria: Cost analysis
    • Cook, V.J., Turenne, C.Y., Wolfe, J., Pauls, R. Kabani, A. (2003) Conventional methods versus 16S ribosomal DNA sequencing for identification of nontuberculous mycobacteria: cost analysis. J Clin Microbiol 41, 1010 1015.
    • (2003) J Clin Microbiol , vol.41 , pp. 1010-1015
    • Cook, V.J.1    Turenne, C.Y.2    Wolfe, J.3    Pauls, R.4    Kabani, A.5
  • 4
    • 84985161098 scopus 로고
    • Probiotics in man and animals
    • Fuller, R. (1989) Probiotics in man and animals. J Appl Bacteriol 66, 365 378.
    • (1989) J Appl Bacteriol , vol.66 , pp. 365-378
    • Fuller, R.1
  • 5
    • 0036962253 scopus 로고    scopus 로고
    • Species specific identification of nine human Bifidobacterium spp. in feces
    • Germond, J.E., Mamin, O. Mollet, B. (2002) Species specific identification of nine human Bifidobacterium spp. in feces. Syst Appl Microbiol 25, 536 543.
    • (2002) Syst Appl Microbiol , vol.25 , pp. 536-543
    • Germond, J.E.1    Mamin, O.2    Mollet, B.3
  • 6
    • 18444399939 scopus 로고    scopus 로고
    • Quantitative real-rime PCR assays to identify and quantify fecal Bifidobacterium species in infants receiving a prebiotic infant formula
    • Haarman, M. Knol, J. (2005) Quantitative real-rime PCR assays to identify and quantify fecal Bifidobacterium species in infants receiving a prebiotic infant formula. Appl Environ Microbiol 71, 2318 2324.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 2318-2324
    • Haarman, M.1    Knol, J.2
  • 7
    • 0030897271 scopus 로고    scopus 로고
    • Identification and quantification of Bifidobacterium species isolated from food with genus-specific 16S rRNA-targeted probes by colony hybridization and PCR
    • Kaufmann, P., Pfefferkorn, A., Teuber, M. Meile, L. (1997) Identification and quantification of Bifidobacterium species isolated from food with genus-specific 16S rRNA-targeted probes by colony hybridization and PCR. Appl Environ Microbiol 63, 1268 1273.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 1268-1273
    • Kaufmann, P.1    Pfefferkorn, A.2    Teuber, M.3    Meile, L.4
  • 8
    • 30744441664 scopus 로고    scopus 로고
    • Evaluation of amplified ribosomal DNA restriction analysis (ARDRA) and species-specific PCR for identification of Bifidobacterium species
    • Krizova, J., Spanova, A. Rittich, B. (2006) Evaluation of amplified ribosomal DNA restriction analysis (ARDRA) and species-specific PCR for identification of Bifidobacterium species. Syst Appl Microbiol 29, 36 44.
    • (2006) Syst Appl Microbiol , vol.29 , pp. 36-44
    • Krizova, J.1    Spanova, A.2    Rittich, B.3
  • 9
    • 23744462797 scopus 로고    scopus 로고
    • Rapid identification of potentially probiotic Bifidobacterium species by multiplex PCR using species-specific primers based on the region extending from 16S rRNA through 23S rRNA
    • Kwon, H.S., Yang, E.H., Lee, S.H., Yeon, S.W., Kang, B.H. Kim, T.Y. (2005) Rapid identification of potentially probiotic Bifidobacterium species by multiplex PCR using species-specific primers based on the region extending from 16S rRNA through 23S rRNA. FEMS Microbiol Lett 250, 55 62.
    • (2005) FEMS Microbiol Lett , vol.250 , pp. 55-62
    • Kwon, H.S.1    Yang, E.H.2    Lee, S.H.3    Yeon, S.W.4    Kang, B.H.5    Kim, T.Y.6
  • 11
    • 0344430301 scopus 로고    scopus 로고
    • Identification of Bifidobacterium species using rep-PCR fingerprinting
    • Masco, L., Huys, G., Gevers, D., Verbrugghen, L. Swings, J. (2003) Identification of Bifidobacterium species using rep-PCR fingerprinting. Syst Appl Microbiol 26, 557 563.
    • (2003) Syst Appl Microbiol , vol.26 , pp. 557-563
    • Masco, L.1    Huys, G.2    Gevers, D.3    Verbrugghen, L.4    Swings, J.5
  • 12
    • 0031757493 scopus 로고    scopus 로고
    • Rapid identification of human intestinal bifidobacteria by 16S rRNA-targeted species- and group-specific primers
    • Matsuki, T., Watanabe, K., Tanaka, R. Oyaizu, H. (1998) Rapid identification of human intestinal bifidobacteria by 16S rRNA-targeted species- and group-specific primers. FEMS Microbiol Lett 167, 113 121.
    • (1998) FEMS Microbiol Lett , vol.167 , pp. 113-121
    • Matsuki, T.1    Watanabe, K.2    Tanaka, R.3    Oyaizu, H.4
  • 13
    • 0032878580 scopus 로고    scopus 로고
    • Distribution of bifidobacterial species in human intestinal microflora examined with 16S rRNA-gene-targeted species-specific primers
    • Matsuki, T., Watanabe, K., Tanaka, R., Fukuda, M. Oyaizu, H. (1999) Distribution of bifidobacterial species in human intestinal microflora examined with 16S rRNA-gene-targeted species-specific primers. Appl Environ Microbiol 65, 4506 4512.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 4506-4512
    • Matsuki, T.1    Watanabe, K.2    Tanaka, R.3    Fukuda, M.4    Oyaizu, H.5
  • 14
    • 0038664251 scopus 로고    scopus 로고
    • Multiplex PCR using 16S rRNA gene-targeted primers for the identification of bifidobacteria from human origin
    • Mullie, C., Odou, M.F., Singer, E., Romond, M.D. Izard, D. (2003) Multiplex PCR using 16S rRNA gene-targeted primers for the identification of bifidobacteria from human origin. FEMS Microbiol Lett 222, 129 136.
    • (2003) FEMS Microbiol Lett , vol.222 , pp. 129-136
    • Mullie, C.1    Odou, M.F.2    Singer, E.3    Romond, M.D.4    Izard, D.5
  • 15
    • 0028050316 scopus 로고
    • Feeding of Bifidobacterium lactis and Streptococcus thermophilus to infant in hospital for prevention of diarrhea and shedding of rotavirus
    • Saavedra, J.M., Baumann, N.A. Oung, I. (1994) Feeding of Bifidobacterium lactis and Streptococcus thermophilus to infant in hospital for prevention of diarrhea and shedding of rotavirus. Lancet 334, 1046 1049.
    • (1994) Lancet , vol.334 , pp. 1046-1049
    • Saavedra, J.M.1    Baumann, N.A.2    Oung, I.3
  • 16
    • 0012391975 scopus 로고    scopus 로고
    • Effect of long term consumption of infant formulas with bifidobacteria and S. thermophilus on stool pattern and diaper rash in infants
    • Saavedra, J.M., Abi-Hanna, A., Moore, N. Yolken, R. (1998) Effect of long term consumption of infant formulas with bifidobacteria and S. thermophilus on stool pattern and diaper rash in infants. J Pediatr Gastroenterol Nutr 27, 483 486.
    • (1998) J Pediatr Gastroenterol Nutr , vol.27 , pp. 483-486
    • Saavedra, J.M.1    Abi-Hanna, A.2    Moore, N.3    Yolken, R.4
  • 17
    • 0033302218 scopus 로고    scopus 로고
    • Identification of lactobacilli and bifidobacteria
    • Tannock, G.W. (1999) Identification of lactobacilli and bifidobacteria. Curr Issues Mol Biol 1, 53 64.
    • (1999) Curr Issues Mol Biol , vol.1 , pp. 53-64
    • Tannock, G.W.1
  • 18
    • 0036952608 scopus 로고    scopus 로고
    • Rapid identification, differentiation, and proposed new taxonomic classification of Bifidobacterium lactis
    • Ventura, M. Zink, R. (2002) Rapid identification, differentiation, and proposed new taxonomic classification of Bifidobacterium lactis. Appl Environ Microbiol 68, 6429 6434.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 6429-6434
    • Ventura, M.1    Zink, R.2
  • 19
    • 0035374576 scopus 로고    scopus 로고
    • Specific identification and targeted characterization of Bifidobacterium lactis from different environmental isolates by a combined multiplex-PCR approach
    • Ventura, M., Reniero, R. Zink, R. (2001) Specific identification and targeted characterization of Bifidobacterium lactis from different environmental isolates by a combined multiplex-PCR approach. Appl Environ Microbiol 67, 2760 2765.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 2760-2765
    • Ventura, M.1    Reniero, R.2    Zink, R.3
  • 20
    • 0038154010 scopus 로고    scopus 로고
    • Identification and tracing of Bifidobacterium species by use of enterobacterial repetitive intergenic consensus sequences
    • Ventura, M., Meylan, V. Zink, R. (2003) Identification and tracing of Bifidobacterium species by use of enterobacterial repetitive intergenic consensus sequences. Appl Environ Microbiol 69, 4296 4301.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 4296-4301
    • Ventura, M.1    Meylan, V.2    Zink, R.3
  • 21
    • 0037031130 scopus 로고    scopus 로고
    • Design and evaluation of oligonucleotide-microarray method for the detection of human intestinal bacteria in fecal samples
    • Wang, R.F., Beggs, M.L., Robertson, L.H. Cerniglia, C.E. (2002) Design and evaluation of oligonucleotide-microarray method for the detection of human intestinal bacteria in fecal samples. FEMS Microbiol Lett 213, 175 182.
    • (2002) FEMS Microbiol Lett , vol.213 , pp. 175-182
    • Wang, R.F.1    Beggs, M.L.2    Robertson, L.H.3    Cerniglia, C.E.4
  • 22
    • 4344598361 scopus 로고    scopus 로고
    • ERIC-PCR fingerprinting-based community DNA hybridization to pinpoint genome-specific fragments as molecular markers to identify and track populations common to healthy human guts
    • Wei, G., Pan, L., Du, H., Chen, J. Zhao, L. (2004) ERIC-PCR fingerprinting-based community DNA hybridization to pinpoint genome-specific fragments as molecular markers to identify and track populations common to healthy human guts. J Microbiol Methods 59, 91 108.
    • (2004) J Microbiol Methods , vol.59 , pp. 91-108
    • Wei, G.1    Pan, L.2    Du, H.3    Chen, J.4    Zhao, L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.