-
1
-
-
26944476716
-
Genomic organization of molecular differentiation in Norway spruce (Picea abies
-
Acheré V, Favre JM, Besnard G, Jeandroz S (2005) Genomic organization of molecular differentiation in Norway spruce (Picea abies). Molecular Ecology, 14, 3191 3201.
-
(2005)
Molecular Ecology
, vol.14
, pp. 3191-3201
-
-
Acheré, V.1
Favre, J.M.2
Besnard, G.3
Jeandroz, S.4
-
2
-
-
0036911353
-
Interrogating a high-density SNP map for signatures of natural selection
-
Akey JM, Zhang G, Zhang K, Jin L, Shriver MD (2002) Interrogating a high-density SNP map for signatures of natural selection. Genome Research, 12, 1805 1814.
-
(2002)
Genome Research
, vol.12
, pp. 1805-1814
-
-
Akey, J.M.1
Zhang, G.2
Zhang, K.3
Jin, L.4
Shriver, M.D.5
-
3
-
-
0034727107
-
An SNP map of the human genome generated by reduced representation shotgun sequencing
-
Altshuler D, Pollara VJ, Cowles CR et al 2000) An SNP map of the human genome generated by reduced representation shotgun sequencing. Nature, 407, 513 516.
-
(2000)
Nature
, vol.407
, pp. 513-516
-
-
Altshuler, D.1
Pollara, V.J.2
Cowles, C.R.3
Al, E.4
-
4
-
-
11444268311
-
The impact of climate change on growth of local white spruce populations in Québec, Canada
-
Andalo C, Beaulieu J, Bousquet J (2005) The impact of climate change on growth of local white spruce populations in Québec, Canada. Forest Ecology and Management, 205, 169 182.
-
(2005)
Forest Ecology and Management
, vol.205
, pp. 169-182
-
-
Andalo, C.1
Beaulieu, J.2
Bousquet, J.3
-
5
-
-
26444586246
-
Haplotype diversity in 11 candidate genes across four populations
-
Beaty TH, Fallin MD, Hetmanski JB et al 2005) Haplotype diversity in 11 candidate genes across four populations. Genetics, 171, 259 267.
-
(2005)
Genetics
, vol.171
, pp. 259-267
-
-
Beaty, T.H.1
Fallin, M.D.2
Hetmanski, J.B.3
Al, E.4
-
6
-
-
1642269679
-
Identifying adaptive genetic divergence among populations from genome scans
-
Beaumont MA, Balding DJ (2004) Identifying adaptive genetic divergence among populations from genome scans. Molecular Ecology, 13, 969 980.
-
(2004)
Molecular Ecology
, vol.13
, pp. 969-980
-
-
Beaumont, M.A.1
Balding, D.J.2
-
8
-
-
34247262031
-
Conifer R2R3-MYB transcription factors: Sequence analyses and gene expression in wood-forming tissues of white spruce (Picea glauca
-
Bedon F, Grima-Pettenati J, Mackay J (2007) Conifer R2R3-MYB transcription factors: sequence analyses and gene expression in wood-forming tissues of white spruce (Picea glauca). BMC Plant Biology, 7, 17 (17p.).
-
(2007)
BMC Plant Biology
, vol.7
, pp. 17
-
-
Bedon, F.1
Grima-Pettenati, J.2
MacKay, J.3
-
9
-
-
33644901809
-
Explorative genome scan to detect candidate loci for adaptation along a gradient in the common frog (Rana temporaria
-
Bonin A, Taberlet P, Miaud C, Pompanon F (2006) Explorative genome scan to detect candidate loci for adaptation along a gradient in the common frog (Rana temporaria). Molecular Biology and Evolution, 23, 773 783.
-
(2006)
Molecular Biology and Evolution
, vol.23
, pp. 773-783
-
-
Bonin, A.1
Taberlet, P.2
Miaud, C.3
Pompanon, F.4
-
10
-
-
33847051947
-
The molecular ecologist's guide to expressed sequence tag
-
Bouck A, Vision T (2007) The molecular ecologist's guide to expressed sequence tag. Molecular Ecology, 16, 909 924.
-
(2007)
Molecular Ecology
, vol.16
, pp. 909-924
-
-
Bouck, A.1
Vision, T.2
-
11
-
-
39549106423
-
Spruce
-
In: (ed. Kole, C.), Vol. 7. pp. Springer-Verlag, Berlin Heidelberg, Germany.
-
Bousquet J, Isabel N, Pelgas B et al 2007) Spruce. In : Genome Mapping and Molecular Breeding in Plants (ed. Kole C), Vol. 7. Forest Trees, pp. 93 114. Springer-Verlag, Berlin Heidelberg, Germany.
-
(2007)
Genome Mapping and Molecular Breeding in Plants. Forest Trees
, pp. 93-114
-
-
Bousquet, J.1
Isabel, N.2
Pelgas, B.3
-
12
-
-
0344873755
-
Allele substitution at a flower colour locus produces a pollinator shift in monkey flowers
-
Bradshaw HDJ, Schemske DW (2003) Allele substitution at a flower colour locus produces a pollinator shift in monkey flowers. Nature, 426, 176 178.
-
(2003)
Nature
, vol.426
, pp. 176-178
-
-
Bradshaw, H.D.J.1
Schemske, D.W.2
-
13
-
-
0037177625
-
Genetic dissection of transcriptional regulation in budding yeast
-
Brem RB, Yvert G, Clinton R, Kruglyak L (2002) Genetic dissection of transcriptional regulation in budding yeast. Science, 296, 752 755.
-
(2002)
Science
, vol.296
, pp. 752-755
-
-
Brem, R.B.1
Yvert, G.2
Clinton, R.3
Kruglyak, L.4
-
14
-
-
35648937584
-
A genome-wide association study shows that common alleles of SMAD7 influence colorectal cancer risk
-
Broderick P, Carvajal-Carmona L, Webb E et al 2007) A genome-wide association study shows that common alleles of SMAD7 influence colorectal cancer risk. Nature Genetics, 39, 1315 1317.
-
(2007)
Nature Genetics
, vol.39
, pp. 1315-1317
-
-
Broderick, P.1
Carvajal-Carmona, L.2
Webb, E.3
Al, E.4
-
15
-
-
6344279807
-
Nucleotide diversity and linkage disequilibrium in loblolly pine
-
Brown GR, Gill GP, Kuntz RJ, Langley CH, Neale D (2004) Nucleotide diversity and linkage disequilibrium in loblolly pine. Proceedings of the National Academy of Sciences, USA, 101, 15255 15260.
-
(2004)
Proceedings of the National Academy of Sciences, USA
, vol.101
, pp. 15255-15260
-
-
Brown, G.R.1
Gill, G.P.2
Kuntz, R.J.3
Langley, C.H.4
Neale, D.5
-
16
-
-
0037687926
-
The utility of single nucleotide polymorphisms in inferences of population history
-
Brumfield RT, Beerli P, Nickerson DA, Edwards SV (2003) The utility of single nucleotide polymorphisms in inferences of population history. Trends in Ecology and Evolution, 18, 249 256.
-
(2003)
Trends in Ecology and Evolution
, vol.18
, pp. 249-256
-
-
Brumfield, R.T.1
Beerli, P.2
Nickerson, D.A.3
Edwards, S.V.4
-
17
-
-
1942501654
-
Generic scan using AFLP markers as a means to assess the role of directional selection in the divergence of sympatric whitefish ecotypes
-
Campbell D, Bernatchez L (2004) Generic scan using AFLP markers as a means to assess the role of directional selection in the divergence of sympatric whitefish ecotypes. Molecular Biology and Evolution, 21, 945 956.
-
(2004)
Molecular Biology and Evolution
, vol.21
, pp. 945-956
-
-
Campbell, D.1
Bernatchez, L.2
-
18
-
-
34347389905
-
Three distinct modes of intron dynamics in the evolution of eukaryotes
-
Carmel L, Wolf YI, Rogozin IB, Koonin EV (2007) Three distinct modes of intron dynamics in the evolution of eukaryotes. Genome Research, 17, 1034 1044.
-
(2007)
Genome Research
, vol.17
, pp. 1034-1044
-
-
Carmel, L.1
Wolf, Y.I.2
Rogozin, I.B.3
Koonin, E.V.4
-
19
-
-
2442655226
-
Similar rates but different modes of sequence evolution in introns and at exonic silent sites in rodents: Evidence for selectively driven codon usage
-
Chamary JV, Hurst LD (2004) Similar rates but different modes of sequence evolution in introns and at exonic silent sites in rodents: evidence for selectively driven codon usage. Molecular Biology and Evolution, 21, 1014 1023.
-
(2004)
Molecular Biology and Evolution
, vol.21
, pp. 1014-1023
-
-
Chamary, J.V.1
Hurst, L.D.2
-
20
-
-
0038744804
-
SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines
-
(14p.).
-
Ching A, Caldwell K, Jung M et al 2002) SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines. BMC Genetics, 3, 19 (14p.).
-
(2002)
BMC Genetics
, vol.3
, pp. 19
-
-
Ching, A.1
Caldwell, K.2
Jung, M.3
Al, E.4
-
21
-
-
2542496339
-
Effects of a severe drought on growth and wood anatomical properties of Quercus Faginea
-
Corcuera L, Camarero JJ, Gil-Pelegrín E (2004) Effects of a severe drought on growth and wood anatomical properties of Quercus Faginea. IAWA Journal, 25, 185 204.
-
(2004)
IAWA Journal
, vol.25
, pp. 185-204
-
-
Corcuera, L.1
Camarero, J.J.2
Gil-Pelegrín, E.3
-
22
-
-
25444453446
-
High-diversity genes in the Arabidopsis genome
-
Cork JM, Purugganan MD (2005) High-diversity genes in the Arabidopsis genome. Genetics, 170, 1897 1911.
-
(2005)
Genetics
, vol.170
, pp. 1897-1911
-
-
Cork, J.M.1
Purugganan, M.D.2
-
23
-
-
31744448843
-
Conserved noncoding sequences are selectively constrained and not mutation cold spots
-
Drake JA, Bird C, Nemesh J et al 2005) Conserved noncoding sequences are selectively constrained and not mutation cold spots. Nature Genetics, 38, 223 227.
-
(2005)
Nature Genetics
, vol.38
, pp. 223-227
-
-
Drake, J.A.1
Bird, C.2
Nemesh, J.3
Al, E.4
-
24
-
-
4344582028
-
Quantitative trait locus analyses and the study of evolutionary process
-
Erickson DL, Fenster CB, Stenoien HK, Price D (2004) Quantitative trait locus analyses and the study of evolutionary process. Molecular Ecology, 13, 2505 2522.
-
(2004)
Molecular Ecology
, vol.13
, pp. 2505-2522
-
-
Erickson, D.L.1
Fenster, C.B.2
Stenoien, H.K.3
Price, D.4
-
25
-
-
2442667212
-
Highly parallel SNP genotyping
-
In: pp. Cold Spring. Harbor Laboratory Press, Cold Spring Harbor, NY.
-
Fan JB, Oliphant A, Shen R et al 2003) Highly parallel SNP genotyping. In : Cold Spring Harbor Symposia on Quantitative Biology, pp. 69 78. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(2003)
Cold Spring Harbor Symposia on Quantitative Biology
, pp. 69-78
-
-
Fan, J.B.1
Oliphant, A.2
Shen, R.3
Al, E.4
-
26
-
-
0035993631
-
Applications of selective neutrality tests to molecular ecology
-
Ford MJ (2002) Applications of selective neutrality tests to molecular ecology. Molecular Ecology, 11, 1245 1262.
-
(2002)
Molecular Ecology
, vol.11
, pp. 1245-1262
-
-
Ford, M.J.1
-
27
-
-
0032860238
-
Asymmetric substitution patterns: A review of possible underlying mutational or selective mechanisms
-
Frank AC, Lobry JR (1999) Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms. Gene, 238, 65 77.
-
(1999)
Gene
, vol.238
, pp. 65-77
-
-
Frank, A.C.1
Lobry, J.R.2
-
28
-
-
0033965570
-
Quantitative trait loci and candidate gene mapping of bud set and bud flush in Populus
-
Frewen BE, Chen THH, Howe GT et al 2000) Quantitative trait loci and candidate gene mapping of bud set and bud flush in Populus. Genetics, 154, 837 845.
-
(2000)
Genetics
, vol.154
, pp. 837-845
-
-
Frewen, B.E.1
Chen, T.H.H.2
Howe, G.T.3
Al, E.4
-
29
-
-
34249061913
-
Patterns and rates of intron divergence between humans and chimpanzees
-
(13p.).
-
Gazave E, Marqués-Bonet T, Fernando O, Charlesworth B, Navarro A (2007) Patterns and rates of intron divergence between humans and chimpanzees. Genome Biology, 8, R21 (13p.).
-
(2007)
Genome Biology
, vol.8
-
-
Gazave, E.1
Marqués-Bonet, T.2
Fernando, O.3
Charlesworth, B.4
Navarro, A.5
-
30
-
-
0037146578
-
Finding genes that underlie complex traits
-
Glazier AM, Nadeau JH, Aitman TJ (2002) Finding genes that underlie complex traits. Science, 298, 2345 2349.
-
(2002)
Science
, vol.298
, pp. 2345-2349
-
-
Glazier, A.M.1
Nadeau, J.H.2
Aitman, T.J.3
-
31
-
-
0034893703
-
Comparisons of genetic diversity in white spruce (Picea glauca) and jack pine (Pinus banksiana) seed orchards with natural populations
-
Godt MJW, Hamrick MA, Edwards-Burke MA, Williams JH (2001) Comparisons of genetic diversity in white spruce (Picea glauca) and jack pine (Pinus banksiana) seed orchards with natural populations. Canadian Journal of Forest Research, 31, 943 949.
-
(2001)
Canadian Journal of Forest Research
, vol.31
, pp. 943-949
-
-
Godt, M.J.W.1
Hamrick, M.A.2
Edwards-Burke, M.A.3
Williams, J.H.4
-
32
-
-
15744393574
-
Nucleotide diversity of the ZmPox3 maize peroxidase gene: Relationships between a MITE insertion in exon 2 and variation in forage maize digestibility
-
(11p.).
-
Guillet-Claude C, Birolleau-Touchard C, Manicacci D et al 2004) Nucleotide diversity of the ZmPox3 maize peroxidase gene: relationships between a MITE insertion in exon 2 and variation in forage maize digestibility. BMC Genetics, 5, 19 (11p.).
-
(2004)
BMC Genetics
, vol.5
, pp. 19
-
-
Guillet-Claude, C.1
Birolleau-Touchard, C.2
Manicacci, D.3
Al, E.4
-
33
-
-
0024811787
-
Bacterial adaptation to oxidative stress: Implications for pathogenesis and interaction with phagocytic cells
-
Hassett DJ, Cohen MS (1989) Bacterial adaptation to oxidative stress: implications for pathogenesis and interaction with phagocytic cells. The Federation of American Societies for Experimental Biology, 3, 2574 2582.
-
(1989)
The Federation of American Societies for Experimental Biology
, vol.3
, pp. 2574-2582
-
-
Hassett, D.J.1
Cohen, M.S.2
-
34
-
-
0032965634
-
Perspective: Highly variable loci and their interpretation in evolution and conservation
-
Hedrick PW (1999) Perspective: highly variable loci and their interpretation in evolution and conservation. Evolution, 53, 313 318.
-
(1999)
Evolution
, vol.53
, pp. 313-318
-
-
Hedrick, P.W.1
-
35
-
-
0018999251
-
Spectral method for confidence interval generation and run length control in simulations
-
Heidelberger P, Welch P (1981) Spectral method for confidence interval generation and run length control in simulations. Communications of the ACM, 24, 233 245.
-
(1981)
Communications of the ACM
, vol.24
, pp. 233-245
-
-
Heidelberger, P.1
Welch, P.2
-
36
-
-
1642311939
-
From genotype to phenotype: Unravelling the complexities of cold adaptation in forest trees
-
Howe GT, Aitken SN, Neale DB et al 2003) From genotype to phenotype: unravelling the complexities of cold adaptation in forest trees. Canadian Journal of Botany, 81, 1247 1266.
-
(2003)
Canadian Journal of Botany
, vol.81
, pp. 1247-1266
-
-
Howe, G.T.1
Aitken, S.N.2
Neale, D.B.3
Al, E.4
-
37
-
-
0033766566
-
Genetic basis of climatic adaptation in Scots pine by Bayesian quantitative trait locus analysis
-
Hurme P, Sillanpaa MJ, Arjas E, Repo T, Savolainen O (2000) Genetic basis of climatic adaptation in Scots pine by Bayesian quantitative trait locus analysis. Genetics, 156, 1309 1322.
-
(2000)
Genetics
, vol.156
, pp. 1309-1322
-
-
Hurme, P.1
Sillanpaa, M.J.2
Arjas, E.3
Repo, T.4
Savolainen, O.5
-
38
-
-
34948842866
-
Accuracy and quality of massively parallel DNA pyrosequencing
-
(19p.).
-
Huse SM, Huber JA, Morrison HG, Sogin ML, Welch DM (2007) Accuracy and quality of massively parallel DNA pyrosequencing. Genome Biology, 8, R143 (19p.).
-
(2007)
Genome Biology
, vol.8
-
-
Huse, S.M.1
Huber, J.A.2
Morrison, H.G.3
Sogin, M.L.4
Welch, D.M.5
-
39
-
-
0029064714
-
Complete congruence between gene diversity estimates derived from genotypic data at enzyme and RAPD loci in black spruce
-
Isabel N, Beaulieu J, Bousquet J (1995) Complete congruence between gene diversity estimates derived from genotypic data at enzyme and RAPD loci in black spruce. Proceedings of the National Academy of Sciences, USA, 92, 6369 6373.
-
(1995)
Proceedings of the National Academy of Sciences, USA
, vol.92
, pp. 6369-6373
-
-
Isabel, N.1
Beaulieu, J.2
Bousquet, J.3
-
40
-
-
0032929508
-
Direct evidence for biased gene diversity estimates from dominant random amplified polymorphic DNA (RAPD) fingerprints
-
Isabel N, Beaulieu J, Theriault P, Bousquet J (1999) Direct evidence for biased gene diversity estimates from dominant random amplified polymorphic DNA (RAPD) fingerprints. Molecular Ecology, 8, 477 483.
-
(1999)
Molecular Ecology
, vol.8
, pp. 477-483
-
-
Isabel, N.1
Beaulieu, J.2
Theriault, P.3
Bousquet, J.4
-
41
-
-
0035210240
-
Contrasting evolutionary forces driving population structure at expressed sequence tag polymorphisms, allozymes and quantitative traits in white spruce
-
Jaramillo-Correa JP, Beaulieu J, Bousquet J (2001) Contrasting evolutionary forces driving population structure at expressed sequence tag polymorphisms, allozymes and quantitative traits in white spruce. Molecular Ecology, 10, 2729 2740.
-
(2001)
Molecular Ecology
, vol.10
, pp. 2729-2740
-
-
Jaramillo-Correa, J.P.1
Beaulieu, J.2
Bousquet, J.3
-
43
-
-
0038586483
-
A genome scan to detect candidate regions influenced by local natural selection in human populations
-
Kayser M, Brauer S, Stoneking M (2003) A genome scan to detect candidate regions influenced by local natural selection in human populations. Molecular Biology and Evolution, 20, 893 900.
-
(2003)
Molecular Biology and Evolution
, vol.20
, pp. 893-900
-
-
Kayser, M.1
Brauer, S.2
Stoneking, M.3
-
44
-
-
0344824015
-
Functional constraints and frequency of deleterious mutations in noncoding DNA of rodents
-
Keightley PD, Gaffney DJ (2003) Functional constraints and frequency of deleterious mutations in noncoding DNA of rodents. Proceedings of the National Academy of Sciences, USA, 100, 13402 13406.
-
(2003)
Proceedings of the National Academy of Sciences, USA
, vol.100
, pp. 13402-13406
-
-
Keightley, P.D.1
Gaffney, D.J.2
-
45
-
-
33746693757
-
Genomic signatures of positive selection in humans and the limits of outlier approaches
-
Kelley JL, Madeoy J, Calhoun JC, Swanson W, Akey JM (2006) Genomic signatures of positive selection in humans and the limits of outlier approaches. Genome Research, 16, 980 989.
-
(2006)
Genome Research
, vol.16
, pp. 980-989
-
-
Kelley, J.L.1
Madeoy, J.2
Calhoun, J.C.3
Swanson, W.4
Akey, J.M.5
-
46
-
-
55849095847
-
A practical genome scan for population-specific strong selective sweeps that have reached fixation
-
doi: (10p.).
-
Kimura R, Fujimoto A, Tokunaga K, Ohashi J (2007) A practical genome scan for population-specific strong selective sweeps that have reached fixation. PLoS ONE, 2, E286. doi: (10p.).
-
(2007)
PLoS ONE
, vol.2
-
-
Kimura, R.1
Fujimoto, A.2
Tokunaga, K.3
Ohashi, J.4
-
47
-
-
0038471197
-
Apparent homology of expressed genes from wood-forming tissues of loblolly pine (Pinus taeda L.) with Arabidopsis thaliana
-
Kirst M, Johnson AF, Baucom C et al 2003) Apparent homology of expressed genes from wood-forming tissues of loblolly pine (Pinus taeda L.) with Arabidopsis thaliana. Proceedings of the National Academy of Sciences, USA, 100, 7383 7388.
-
(2003)
Proceedings of the National Academy of Sciences, USA
, vol.100
, pp. 7383-7388
-
-
Kirst, M.1
Johnson, A.F.2
Baucom, C.3
Al, E.4
-
48
-
-
33645130943
-
Nucleotide diversity and linkage disequilibrium in cold-hardiness and wood quality-related candidate genes in Douglas fir
-
Krutovsky KV, Neale DB (2005) Nucleotide diversity and linkage disequilibrium in cold-hardiness and wood quality-related candidate genes in Douglas fir. Genetics, 171, 2029 2041.
-
(2005)
Genetics
, vol.171
, pp. 2029-2041
-
-
Krutovsky, K.V.1
Neale, D.B.2
-
49
-
-
0002876129
-
Genetic variation in juvenile growth and phenology in a white spruce provenance-progeny test
-
Li P, Beaulieu J, Corriveau A, Bousquet J (1993) Genetic variation in juvenile growth and phenology in a white spruce provenance-progeny test. Silvae Genetica, 42, 52 59.
-
(1993)
Silvae Genetica
, vol.42
, pp. 52-59
-
-
Li, P.1
Beaulieu, J.2
Corriveau, A.3
Bousquet, J.4
-
50
-
-
0030876969
-
Genetic structure and patterns of genetic variation among populations in eastern white spruce (Picea glauca
-
Li P, Beaulieu J, Bousquet J (1997) Genetic structure and patterns of genetic variation among populations in eastern white spruce (Picea glauca). Canadian Journal of Forest Research, 27, 189 198.
-
(1997)
Canadian Journal of Forest Research
, vol.27
, pp. 189-198
-
-
Li, P.1
Beaulieu, J.2
Bousquet, J.3
-
51
-
-
0037348716
-
Gene discovery in the Apicomplexa as revealed by EST sequencing and assembly of a comparative gene database
-
Li L, Brunk BP, Kissinger JC et al 2003) Gene discovery in the Apicomplexa as revealed by EST sequencing and assembly of a comparative gene database. Genome Research, 13, 443 454.
-
(2003)
Genome Research
, vol.13
, pp. 443-454
-
-
Li, L.1
Brunk, B.P.2
Kissinger, J.C.3
Al, E.4
-
52
-
-
0345304399
-
The power and promise of population genomics: From genotyping to genome typing
-
Luikart G, England P, Tallmon D, Jordan S, Taberlet P (2003) The power and promise of population genomics: from genotyping to genome typing. Nature Reviews of Genetics, 4, 981 994.
-
(2003)
Nature Reviews of Genetics
, vol.4
, pp. 981-994
-
-
Luikart, G.1
England, P.2
Tallmon, D.3
Jordan, S.4
Taberlet, P.5
-
53
-
-
30744475434
-
The origins of eukaryotic gene structure
-
Lynch M (2006) The origins of eukaryotic gene structure. Molecular Biology and Evolution, 23, 450 468.
-
(2006)
Molecular Biology and Evolution
, vol.23
, pp. 450-468
-
-
Lynch, M.1
-
54
-
-
0036911605
-
Distribution and characterization of regulatory elements in the human genome
-
Majewski J, Ott J (2002) Distribution and characterization of regulatory elements in the human genome. Genome Research, 12, 1827 1836.
-
(2002)
Genome Research
, vol.12
, pp. 1827-1836
-
-
Majewski, J.1
Ott, J.2
-
55
-
-
0035983453
-
Sampling within the genome for measuring within-population diversity: Trade-offs between markers
-
Mariette S, Le Corre V, Austerlitz F, Kremer A (2002) Sampling within the genome for measuring within-population diversity: trade-offs between markers. Molecular Ecology, 11, 1145 1156.
-
(2002)
Molecular Ecology
, vol.11
, pp. 1145-1156
-
-
Mariette, S.1
Le Corre, V.2
Austerlitz, F.3
Kremer, A.4
-
56
-
-
0016220238
-
The hitch-hiking effect of a favorable gene
-
Maynard Smith J, Haigh J (1974) The hitch-hiking effect of a favorable gene. Genetic Research, 23, 23 35.
-
(1974)
Genetic Research
, vol.23
, pp. 23-35
-
-
Maynard Smith, J.1
Haigh, J.2
-
57
-
-
0034640001
-
Single nucleotide polymorphism and linkage disequilibrium within the TCR α/δ
-
Miller WG, Englen MD, Kathariou S et al 2000) Single nucleotide polymorphism and linkage disequilibrium within the TCR α/δ. Human Molecular Genetics, 9, 1011 1019.
-
(2000)
Human Molecular Genetics
, vol.9
, pp. 1011-1019
-
-
Miller, W.G.1
Englen, M.D.2
Kathariou, S.3
Al, E.4
-
58
-
-
0034640001
-
Single nucleotide polymorphism and linkage disequilibrium within the TCR α/δ locus
-
Moffatt MF, Traherne JA, Abecasis JR, Cookson WOCM (2000) Single nucleotide polymorphism and linkage disequilibrium within the TCR α/δ locus. Human Molecular Genetics, 9, 1011 1019.
-
(2000)
Human Molecular Genetics
, vol.9
, pp. 1011-1019
-
-
Moffatt, M.F.1
Traherne, J.A.2
Abecasis, J.R.3
Wocm, C.4
-
59
-
-
1642271573
-
SNPs in ecology, evolution and conservation
-
the SNP workshop Group (
-
Morin PA, Luikart G, Wayne RK, the SNP workshop Group (2004) SNPs in ecology, evolution and conservation. Trends in Ecology and Evolution, 19, 208 216.
-
(2004)
Trends in Ecology and Evolution
, vol.19
, pp. 208-216
-
-
Morin, P.A.1
Luikart, G.2
Wayne, R.K.3
-
60
-
-
0032412237
-
Nuclear DNA amounts in gymnosperms
-
Murray BG (1998) Nuclear DNA amounts in gymnosperms. Annals of Botany, 82, 3 15.
-
(1998)
Annals of Botany
, vol.82
, pp. 3-15
-
-
Murray, B.G.1
-
61
-
-
3042745450
-
Association genetics of complex traits in conifers
-
Neale DB, Savolainen O (2004) Association genetics of complex traits in conifers. Trends in Plant Science, 9, 325 330.
-
(2004)
Trends in Plant Science
, vol.9
, pp. 325-330
-
-
Neale, D.B.1
Savolainen, O.2
-
62
-
-
0018147653
-
Estimation of average heterozygosity and genetic distance from a small number of individuals
-
Nei M (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics, 89, 583 590.
-
(1978)
Genetics
, vol.89
, pp. 583-590
-
-
Nei, M.1
-
63
-
-
1942485952
-
Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants
-
Nybom H (2004) Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Molecular Ecology, 13, 1143 1155.
-
(2004)
Molecular Ecology
, vol.13
, pp. 1143-1155
-
-
Nybom, H.1
-
64
-
-
34548270866
-
Identification and characterization of 14 polymorphic EST-derived microsatellites in eelgrass (Zostera marina
-
Oetjen K, Reusch TBH (2007) Identification and characterization of 14 polymorphic EST-derived microsatellites in eelgrass (Zostera marina). Molecular Ecology Notes, 7, 777 780.
-
(2007)
Molecular Ecology Notes
, vol.7
, pp. 777-780
-
-
Oetjen, K.1
Reusch, T.B.H.2
-
65
-
-
33645894460
-
Evidence for a large-scale population structure among accessions of Arabidopsis thaliana: Possible causes and consequences for the distribution of linkage disequilibrium
-
Ostrowski M-F, David J, Santoni S et al 2006) Evidence for a large-scale population structure among accessions of Arabidopsis thaliana: possible causes and consequences for the distribution of linkage disequilibrium. Molecular Ecology, 15, 1507 1517.
-
(2006)
Molecular Ecology
, vol.15
, pp. 1507-1517
-
-
Ostrowski, M.-F.1
David, J.2
Santoni, S.3
Al, E.4
-
66
-
-
27744527781
-
Generation, annotation, analysis and database integration of 16 500 white spruce EST clusters
-
(19p.).
-
Pavy N, Paule C, Parsons L et al 2005) Generation, annotation, analysis and database integration of 16 500 white spruce EST clusters. BMC Genomics, 6, 144 (19p.).
-
(2005)
BMC Genomics
, vol.6
, pp. 144
-
-
Pavy, N.1
Paule, C.2
Parsons, L.3
Al, E.4
-
67
-
-
33748126341
-
Automated SNP detection from a large collection of white spruce expressed sequences: Contributing factors and approaches for the categorization of SNPs
-
(14p.).
-
Pavy N, Parsons L, Paule C, Mackay J, Bousquet J (2006) Automated SNP detection from a large collection of white spruce expressed sequences: contributing factors and approaches for the categorization of SNPs. BMC Genomics, 7, 174 (14p.).
-
(2006)
BMC Genomics
, vol.7
, pp. 174
-
-
Pavy, N.1
Parsons, L.2
Paule, C.3
MacKay, J.4
Bousquet, J.5
-
68
-
-
39549102178
-
Enhancing genetic mapping of complex genomes through the design of highly-multiplexed SNP arrays: Application to the large and unsequenced genomes of white spruce and black spruce
-
(17p.).
-
Pavy N, Pelgas B, Beauseigle S et al 2008) Enhancing genetic mapping of complex genomes through the design of highly-multiplexed SNP arrays: application to the large and unsequenced genomes of white spruce and black spruce. BMC Genomics, 9, 21 (17p.).
-
(2008)
BMC Genomics
, vol.9
, pp. 21
-
-
Pavy, N.1
Pelgas, B.2
Beauseigle, S.3
Al, E.4
-
69
-
-
33750692340
-
Comparative genome mapping among Picea glauca, P. abies and P. mariana X rubens, and correspondance with other Pinaceae
-
Pelgas B, Beauseigle S, Acheré V et al 2006) Comparative genome mapping among Picea glauca, P. abies and P. mariana X rubens, and correspondance with other Pinaceae. Theoretical and Applied Genetics, 113, 1371 1393.
-
(2006)
Theoretical and Applied Genetics
, vol.113
, pp. 1371-1393
-
-
Pelgas, B.1
Beauseigle, S.2
Acheré, V.3
Al, E.4
-
70
-
-
0035123863
-
Genetic diversity and mating system of post-fire and post-harvest black spruce: An investigation using codominant sequence-tagged site (STS) markers
-
Perry DJ, Bousquet J (2001) Genetic diversity and mating system of post-fire and post-harvest black spruce: an investigation using codominant sequence-tagged site (STS) markers. Canadian Journal of Forest Research, 31, 32 40.
-
(2001)
Canadian Journal of Forest Research
, vol.31
, pp. 32-40
-
-
Perry, D.J.1
Bousquet, J.2
-
71
-
-
0036196885
-
The signature of positive selection at randomly chosen loci
-
Przeworski M (2002) The signature of positive selection at randomly chosen loci. Genetics, 160, 1179 1189.
-
(2002)
Genetics
, vol.160
, pp. 1179-1189
-
-
Przeworski, M.1
-
73
-
-
0030498102
-
A generalized approach to landscape-wide seasonal forecasting with temperature-driven simulation models
-
Régnière J (1996) A generalized approach to landscape-wide seasonal forecasting with temperature-driven simulation models. Environmental Entomology, 25, 869 881.
-
(1996)
Environmental Entomology
, vol.25
, pp. 869-881
-
-
Régnière, J.1
-
74
-
-
16544392329
-
Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to Nitrogen
-
Schieble WR, Morcuende R, Czechowski T et al 2004) Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to Nitrogen. Plant Physiology, 136, 2483 2499.
-
(2004)
Plant Physiology
, vol.136
, pp. 2483-2499
-
-
Schieble, W.R.1
Morcuende, R.2
Czechowski, T.3
Al, E.4
-
75
-
-
0037213556
-
Hitchhiking mapping - Functional genomics from the population genetics perspective
-
Schlötterer C (2003) Hitchhiking mapping - functional genomics from the population genetics perspective. Trends in Genetics, 19, 32 38.
-
(2003)
Trends in Genetics
, vol.19
, pp. 32-38
-
-
Schlötterer, C.1
-
76
-
-
10844254876
-
Genome scanning for interspecific differentiation between two closely related oak species [quercus robur L. & Quercus petraea (Matt.) Liebl.]
-
Scotti-Saintagne C, Mariette S, Porth I et al 2004) Genome scanning for interspecific differentiation between two closely related oak species [Quercus robur L. & Quercus petraea (Matt.) Liebl.]. Genetics, 168, 1615 1626.
-
(2004)
Genetics
, vol.168
, pp. 1615-1626
-
-
Scotti-Saintagne, C.1
Mariette, S.2
Porth, I.3
Al, E.4
-
77
-
-
20244367169
-
High-throughput SNP genotyping on universal bead arrays
-
Shen R, Fan JB, Campbell D et al 2005) High-throughput SNP genotyping on universal bead arrays. Mutation Research, 573, 70 82.
-
(2005)
Mutation Research
, vol.573
, pp. 70-82
-
-
Shen, R.1
Fan, J.B.2
Campbell, D.3
Al, E.4
-
78
-
-
7344226732
-
The effect of strongly selected substitutions on neutral polymorphism: Analytical results based on diffusion theory
-
Stephan W, Wiehe THE, Lenz MW (1992) The effect of strongly selected substitutions on neutral polymorphism: analytical results based on diffusion theory. Theoretical Population Biology, 41, 237 254.
-
(1992)
Theoretical Population Biology
, vol.41
, pp. 237-254
-
-
Stephan, W.1
Wiehe, T.H.E.2
Lenz, M.W.3
-
79
-
-
14844313712
-
Using genome scans of DNA polymorphism to infer adaptive population divergence
-
Storz JF (2005) Using genome scans of DNA polymorphism to infer adaptive population divergence. Molecular Ecology, 14, 671 688.
-
(2005)
Molecular Ecology
, vol.14
, pp. 671-688
-
-
Storz, J.F.1
-
80
-
-
4143088044
-
Genome scans of DNA variability in humans reveal evidence for selective sweeps outside of Africa
-
Storz JF, Payseur BA, Nachman MW (2004) Genome scans of DNA variability in humans reveal evidence for selective sweeps outside of Africa. Molecular Biology and Evolution, 21, 1800 1811.
-
(2004)
Molecular Biology and Evolution
, vol.21
, pp. 1800-1811
-
-
Storz, J.F.1
Payseur, B.A.2
Nachman, M.W.3
-
81
-
-
32544439334
-
Polymorphisms in Cinnamoyl CoA Redustase (CCR) are associated with variation in microfibril angle in Eucalyptus spp
-
Thumma BR, Nolan MF, Evans R, Moran GF (2005) Polymorphisms in Cinnamoyl CoA Redustase (CCR) are associated with variation in microfibril angle in Eucalyptus spp. Genetics, 171, 1257 1265.
-
(2005)
Genetics
, vol.171
, pp. 1257-1265
-
-
Thumma, B.R.1
Nolan, M.F.2
Evans, R.3
Moran, G.F.4
-
82
-
-
34548456864
-
Genome scan to detect genetic structure and adaptive genes of natural populations of Cryptomeria japonica
-
Tsumura Y, Kado T, Takahashi T et al 2007) Genome scan to detect genetic structure and adaptive genes of natural populations of Cryptomeria japonica. Genetics, 176, 2393 2403.
-
(2007)
Genetics
, vol.176
, pp. 2393-2403
-
-
Tsumura, Y.1
Kado, T.2
Takahashi, T.3
Al, E.4
-
83
-
-
33644692857
-
Challenges for identifying functionally important genetic variation: The promise of combining complementary research strategies
-
Vasemägi A, Primmer CR (2005) Challenges for identifying functionally important genetic variation: the promise of combining complementary research strategies. Molecular Ecology, 14, 3623 3642.
-
(2005)
Molecular Ecology
, vol.14
, pp. 3623-3642
-
-
Vasemägi, A.1
Primmer, C.R.2
-
84
-
-
16344384882
-
Expressed sequence tag-linked microsatellites as a source of gene-associated polymorphisms for detecting signatures of divergent selection in Atlantic Salmon (Salmo salar L.)
-
Vasemägi A, Nilsson J, Primmer CR (2005) Expressed sequence tag-linked microsatellites as a source of gene-associated polymorphisms for detecting signatures of divergent selection in Atlantic Salmon (Salmo salar L.). Molecular Biology and Evolution, 22, 1067 1076.
-
(2005)
Molecular Biology and Evolution
, vol.22
, pp. 1067-1076
-
-
Vasemägi, A.1
Nilsson, J.2
Primmer, C.R.3
-
85
-
-
0027137093
-
Genome size and environmental factors in the genus Pinus
-
Wakamiya I, Newton RJ, Johnston JS, Price HJ (1993) Genome size and environmental factors in the genus Pinus. American Journal of Botany, 80, 1235 1241.
-
(1993)
American Journal of Botany
, vol.80
, pp. 1235-1241
-
-
Wakamiya, I.1
Newton, R.J.2
Johnston, J.S.3
Price, H.J.4
-
86
-
-
30344449053
-
Evaluating outlier loci and their effect on the identification of pedigree errors
-
(5p.).
-
Wang KS, Liu M, Paterson A (2005) Evaluating outlier loci and their effect on the identification of pedigree errors. BMC Genetics, 6, S155 (5p.).
-
(2005)
BMC Genetics
, vol.6
-
-
Wang, K.S.1
Liu, M.2
Paterson, A.3
-
87
-
-
0021566877
-
Estimating F-statistics for the analysis of population structure
-
Weir BC, Cockerham CC (1984) Estimating F-statistics for the analysis of population structure. Evolution, 38, 1358 1137.
-
(1984)
Evolution
, vol.38
, pp. 1358-1137
-
-
Weir, B.C.1
Cockerham, C.C.2
-
88
-
-
0034687371
-
The proteins of linked genes evolve at similar rates
-
Williams EJ, Hurst LD (2000) The proteins of linked genes evolve at similar rates. Nature, 407, 900 903.
-
(2000)
Nature
, vol.407
, pp. 900-903
-
-
Williams, E.J.1
Hurst, L.D.2
-
89
-
-
14544306215
-
Molecular population genetics and the search for adaptive evolution in plants
-
Wright SI, Gaut BS (2005) Molecular population genetics and the search for adaptive evolution in plants. Molecular Biology and Evolution, 22, 506 519.
-
(2005)
Molecular Biology and Evolution
, vol.22
, pp. 506-519
-
-
Wright, S.I.1
Gaut, B.S.2
-
90
-
-
19744371138
-
The effects of artificial selection on the maize genome
-
Wright SI, Bi IV, Schroeder SG, Yamasaki M, Doebley JF (2005) The effects of artificial selection on the maize genome. Science, 308, 1310 1314.
-
(2005)
Science
, vol.308
, pp. 1310-1314
-
-
Wright, S.I.1
Bi, I.V.2
Schroeder, S.G.3
Yamasaki, M.4
Doebley, J.F.5
-
91
-
-
42149099930
-
A genome-wide signature of positive selection in ancient and recent invasive expansions of the honey bee Apis mellifera
-
Zayed A, Whitfield CW (2008) A genome-wide signature of positive selection in ancient and recent invasive expansions of the honey bee Apis mellifera. Proceedings of the National Academy of Sciences, USA, 105, 3421 3426.
-
(2008)
Proceedings of the National Academy of Sciences, USA
, vol.105
, pp. 3421-3426
-
-
Zayed, A.1
Whitfield, C.W.2
-
92
-
-
0037355118
-
Single-nucleotide polymorphisms in soybean
-
This collaborative project reflects the interests of the authors to identify genetic variation of adaptive nature in undomesticated species using population genomics approaches. Marie-Claire Namroud is a postdoctoral associate interested in the use of genomic information to design evolutionary applications. Jean Beaulieu is a research scientist interested in quantitative genetics and problems related to the biodiversity of tree species. Nicolas Juge is a mathematician involved in computational biology. Jérôme Laroche is a research biologist interested in the analysis of diversity from a population and phylogenomic perspective. Jean Bousquet is a professor involved in studying the evolutionary biology of plant and tree species from a molecular and genomic perspective.
-
Zhu YL, Song QJ, Hyten DL et al 2003) Single-nucleotide polymorphisms in soybean. Genetics, 163, 1123 1134.
-
(2003)
Genetics
, vol.163
, pp. 1123-1134
-
-
Zhu, Y.L.1
Song, Q.J.2
Hyten, D.L.3
Al, E.4
|