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Volumn 136, Issue 1, 2004, Pages 2483-2499

Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of arabidopsis in response to nitrogen

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; BIOSYNTHESIS; CHLOROPHYLL; HORMONES; METABOLISM; NITRATES; NITROGEN; NUCLEIC ACIDS; PHOTOSYNTHESIS; PLANTS (BOTANY); PROTEINS; REAL TIME SYSTEMS;

EID: 16544392329     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.104.047019     Document Type: Article
Times cited : (876)

References (53)
  • 2
    • 0034869655 scopus 로고    scopus 로고
    • WAKs: Cell wall-associated kinases linking the cytoplasm to the extracellular matrix
    • Anderson CM, Wagner TA, Perret M, He ZH, He D, Kohorn BD (2001) WAKs: cell wall-associated kinases linking the cytoplasm to the extracellular matrix. Plant Mol Biol 47: 197-206
    • (2001) Plant Mol Biol , vol.47 , pp. 197-206
    • Anderson, C.M.1    Wagner, T.A.2    Perret, M.3    He, Z.H.4    He, D.5    Kohorn, B.D.6
  • 3
    • 0034489893 scopus 로고    scopus 로고
    • Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis
    • Borevitz JO, Xia Y, Blount J, Dixon RA, Lamb C (2000) Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis. Plant Cell 12: 2383-2394
    • (2000) Plant Cell , vol.12 , pp. 2383-2394
    • Borevitz, J.O.1    Xia, Y.2    Blount, J.3    Dixon, R.A.4    Lamb, C.5
  • 4
    • 0034960309 scopus 로고    scopus 로고
    • A large family of genes that share homology with CLAVATA3
    • Cock J, McCormick S (2001) A large family of genes that share homology with CLAVATA3. Plant Physiol 126: 939-942
    • (2001) Plant Physiol , vol.126 , pp. 939-942
    • Cock, J.1    McCormick, S.2
  • 5
    • 0029328453 scopus 로고
    • Nitrate: Nutrient and signal for plant growth
    • Crawford NM (1995) Nitrate: nutrient and signal for plant growth. Plant Cell 7: 859-868
    • (1995) Plant Cell , vol.7 , pp. 859-868
    • Crawford, N.M.1
  • 6
    • 1942475192 scopus 로고    scopus 로고
    • Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: Unprecedented sensitivity reveals novel root- and shoot-specific genes
    • Czechowski T, Bari RP, Stitt M, Scheible WR, Udvardi MK (2004) Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes. Plant J 38: 366-379
    • (2004) Plant J , vol.38 , pp. 366-379
    • Czechowski, T.1    Bari, R.P.2    Stitt, M.3    Scheible, W.R.4    Udvardi, M.K.5
  • 7
    • 0347492019 scopus 로고    scopus 로고
    • AGRIS: Arabidopsis Gene Regulatory Information Server, an information resource of Arabidopsis cis-regulatory elements and transcription factors
    • Davuluri RV, Sun H, Palaniswamy SK, Matthews N, Molina C, Kurtz M, Grotewold E (2003) AGRIS: Arabidopsis Gene Regulatory Information Server, an information resource of Arabidopsis cis-regulatory elements and transcription factors. BMC Bioinformatics 4: 25
    • (2003) BMC Bioinformatics , vol.4 , pp. 25
    • Davuluri, R.V.1    Sun, H.2    Palaniswamy, S.K.3    Matthews, N.4    Molina, C.5    Kurtz, M.6    Grotewold, E.7
  • 8
    • 0034759293 scopus 로고    scopus 로고
    • Synergistic derepression of gibberellin signaling by removing RGA and GAI function in Arabidopsis thaliana
    • Dill A, Sun T (2001) Synergistic derepression of gibberellin signaling by removing RGA and GAI function in Arabidopsis thaliana. Genetics 159: 777-785
    • (2001) Genetics , vol.159 , pp. 777-785
    • Dill, A.1    Sun, T.2
  • 9
    • 0035928780 scopus 로고    scopus 로고
    • Establishment of polarity in lateral organs of plants
    • Eshed Y, Baum SF, Perea JV, Bowman JL (2001) Establishment of polarity in lateral organs of plants. Curr Biol 11: 1251-1260
    • (2001) Curr Biol , vol.11 , pp. 1251-1260
    • Eshed, Y.1    Baum, S.F.2    Perea, J.V.3    Bowman, J.L.4
  • 10
    • 0037394262 scopus 로고    scopus 로고
    • The evolution of CONSTANS-like gene families in barley, rice, and Arabidopsis
    • Griffiths S, Dunford RP, Coupland G, Laurie DA (2003) The evolution of CONSTANS-like gene families in barley, rice, and Arabidopsis. Plant Physiol 131: 1855-1867
    • (2003) Plant Physiol , vol.131 , pp. 1855-1867
    • Griffiths, S.1    Dunford, R.P.2    Coupland, G.3    Laurie, D.A.4
  • 11
    • 0034641728 scopus 로고    scopus 로고
    • DGD1-independent biosynthesis of extraplastidic galactolipids after phosphate deprivation in Arabidopsis
    • Härtel H, Dörmann P, Benning C (2000) DGD1-independent biosynthesis of extraplastidic galactolipids after phosphate deprivation in Arabidopsis. Proc Natl Acad Sci USA 97: 10649-10654
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 10649-10654
    • Härtel, H.1    Dörmann, P.2    Benning, C.3
  • 12
    • 0035059568 scopus 로고    scopus 로고
    • A small decrease of plastid transketolase activity in antisense tobacco transformants has dramatic effects on photosynthesis and phenylpropanoid metabolism
    • Henkes S, Sonnewald U, Badur R, Flachmann R, Stitt M (2001) A small decrease of plastid transketolase activity in antisense tobacco transformants has dramatic effects on photosynthesis and phenylpropanoid metabolism. Plant Cell 13: 535-551
    • (2001) Plant Cell , vol.13 , pp. 535-551
    • Henkes, S.1    Sonnewald, U.2    Badur, R.3    Flachmann, R.4    Stitt, M.5
  • 13
    • 0037177855 scopus 로고    scopus 로고
    • Transcript abundance in yeast varies over six orders of magnitude
    • Holland MJ (2002) Transcript abundance in yeast varies over six orders of magnitude. J Biol Chem 277: 14363-14366
    • (2002) J Biol Chem , vol.277 , pp. 14363-14366
    • Holland, M.J.1
  • 14
    • 0036726369 scopus 로고    scopus 로고
    • Global analysis of gene expression in yeast
    • Horak CE, Snyder M (2002) Global analysis of gene expression in yeast. Funct Integr Genomics 2: 171-180
    • (2002) Funct Integr Genomics , vol.2 , pp. 171-180
    • Horak, C.E.1    Snyder, M.2
  • 17
    • 0344514816 scopus 로고    scopus 로고
    • Disruption of the two digalactosyldiacylglycerol synthase genes DGD1 and DGD2 in Arabidopsis reveals the existence of an additional enzyme of galactolipid synthesis
    • Kelly AA, Froehlich JE, Dörmann P (2003) Disruption of the two digalactosyldiacylglycerol synthase genes DGD1 and DGD2 in Arabidopsis reveals the existence of an additional enzyme of galactolipid synthesis. Plant Cell 15: 2694-2706
    • (2003) Plant Cell , vol.15 , pp. 2694-2706
    • Kelly, A.A.1    Froehlich, J.E.2    Dörmann, P.3
  • 18
    • 0034765972 scopus 로고    scopus 로고
    • Gibberellins are not required for normal stem growth in Arabidopsis thaliana in the absence of GAI and RGA
    • King KE, Moritz T, Harberd NP (2001) Gibberellins are not required for normal stem growth in Arabidopsis thaliana in the absence of GAI and RGA. Genetics 159: 767-776
    • (2001) Genetics , vol.159 , pp. 767-776
    • King, K.E.1    Moritz, T.2    Harberd, N.P.3
  • 19
    • 0035205611 scopus 로고    scopus 로고
    • An unexpected plethora of trehalose biosynthesis genes in Arabidopsis thaliana
    • Leyman B, Van Dijck P, Thevelein JM (2001) An unexpected plethora of trehalose biosynthesis genes in Arabidopsis thaliana. Trends Plant Sci 6: 510-513
    • (2001) Trends Plant Sci , vol.6 , pp. 510-513
    • Leyman, B.1    Van Dijck, P.2    Thevelein, J.M.3
  • 21
    • 0142028834 scopus 로고    scopus 로고
    • The Arabidopsis LATERAL ORGAN BOUNDARIES-domain gene ASYMMETRIC LEAVES2 functions in the repression of KNOX gene expression and in adaxial-abaxial patterning
    • Lin W, Shuai B, Springer FS (2003) The Arabidopsis LATERAL ORGAN BOUNDARIES-domain gene ASYMMETRIC LEAVES2 functions in the repression of KNOX gene expression and in adaxial-abaxial patterning. Plant Cell 15: 2241-2252
    • (2003) Plant Cell , vol.15 , pp. 2241-2252
    • Lin, W.1    Shuai, B.2    Springer, F.S.3
  • 24
    • 0035134379 scopus 로고    scopus 로고
    • The immediate cause of the diurnal changes of N metabolism in leaves of nitrate-replete tobacco: A major imbalance between the rate of nitrate reduction and the rates of nitrate uptake and ammonium metabolism during the first part of the light period
    • Matt F, Geiger M, Walch-Liu P, Engels C, Krapp A, Stitt M (2001a) The immediate cause of the diurnal changes of N metabolism in leaves of nitrate-replete tobacco: a major imbalance between the rate of nitrate reduction and the rates of nitrate uptake and ammonium metabolism during the first part of the light period. Plant Cell Environ 24: 177-190
    • (2001) Plant Cell Environ , vol.24 , pp. 177-190
    • Matt, F.1    Geiger, M.2    Walch-Liu, P.3    Engels, C.4    Krapp, A.5    Stitt, M.6
  • 25
    • 0035170619 scopus 로고    scopus 로고
    • Elevated carbon dioxide increases nitrate uptake and nitrate reductase activity when tobacco is growing on nitrate, but increases ammonium uptake and inhibits nitrate reductase activity when tobacco is growing on ammonium nitrate
    • Matt P, Geiger M, Walch-Liu P, Engels C, Krapp A, Stitt M (2001b) Elevated carbon dioxide increases nitrate uptake and nitrate reductase activity when tobacco is growing on nitrate, but increases ammonium uptake and inhibits nitrate reductase activity when tobacco is growing on ammonium nitrate. Plant Cell Environ 24: 1119-1137
    • (2001) Plant Cell Environ , vol.24 , pp. 1119-1137
    • Matt, P.1    Geiger, M.2    Walch-Liu, P.3    Engels, C.4    Krapp, A.5    Stitt, M.6
  • 26
    • 0034636418 scopus 로고    scopus 로고
    • B and C floral organ identity functions require SEPALLATA MADS-box genes
    • Pelaz S, Ditta GS, Baumann E, Wisman E, Yanofsky MF (2000) B and C floral organ identity functions require SEPALLATA MADS-box genes. Nature 405: 200-203
    • (2000) Nature , vol.405 , pp. 200-203
    • Pelaz, S.1    Ditta, G.S.2    Baumann, E.3    Wisman, E.4    Yanofsky, M.F.5
  • 27
    • 0035094564 scopus 로고    scopus 로고
    • Rapid disruption of N metabolism and nitrate transport in spinach plants deprived of sulfate
    • Prosser IM, Purves JV, Saker LR, Clarkson DT (2001) Rapid disruption of N metabolism and nitrate transport in spinach plants deprived of sulfate. J Exp Bot 52: 113-121
    • (2001) J Exp Bot , vol.52 , pp. 113-121
    • Prosser, I.M.1    Purves, J.V.2    Saker, L.R.3    Clarkson, D.T.4
  • 28
    • 0005849132 scopus 로고    scopus 로고
    • Transcriptional regulation: A genomic overview
    • CR Somerville, EM Meyerowitz, eds, American Society of Plant Biologists, Rockville, MD, doi/10.1199/tab.0085
    • Riechmann JL (2002) Transcriptional regulation: a genomic overview. In CR Somerville, EM Meyerowitz, eds, The Arabidopsis Book. American Society of Plant Biologists, Rockville, MD, doi/10.1199/tab.0085, http://www.aspb.org/ publications/Arabidopsis
    • (2002) The Arabidopsis Book
    • Riechmann, J.L.1
  • 29
    • 0035881704 scopus 로고    scopus 로고
    • A conserved MYB transcription factor involved in phosphate starvation signaling both in vascular plants and in unicellular algae
    • Rubio V, Linhares F, Solano R, Martin AC, Iglesias J, Leyva A, Paz-Ares J (2001) A conserved MYB transcription factor involved in phosphate starvation signaling both in vascular plants and in unicellular algae. Genes Dev 15: 2122-2133
    • (2001) Genes Dev , vol.15 , pp. 2122-2133
    • Rubio, V.1    Linhares, F.2    Solano, R.3    Martin, A.C.4    Iglesias, J.5    Leyva, A.6    Paz-Ares, J.7
  • 30
    • 0032078837 scopus 로고    scopus 로고
    • A response-regulator homolog possibly involved in N signal transduction mediated by cytokinin in maize
    • Sakakibara H, Suzuki M, Takei M, Deji A, Taniguchi M, Sugiyama T (1998) A response-regulator homolog possibly involved in N signal transduction mediated by cytokinin in maize. Plant J 14: 337-344
    • (1998) Plant J , vol.14 , pp. 337-344
    • Sakakibara, H.1    Suzuki, M.2    Takei, M.3    Deji, A.4    Taniguchi, M.5    Sugiyama, T.6
  • 31
    • 0033547409 scopus 로고    scopus 로고
    • A plant regulator controlling development of symbiotic root nodules
    • Schauser L, Roussis A, Stiller J, Stougaard J (1999) A plant regulator controlling development of symbiotic root nodules. Nature 402: 191-195
    • (1999) Nature , vol.402 , pp. 191-195
    • Schauser, L.1    Roussis, A.2    Stiller, J.3    Stougaard, J.4
  • 33
    • 0030949331 scopus 로고    scopus 로고
    • Accumulation of nitrate in the shoot acts as a signal to regulate shoot-root allocation in tobacco
    • Scheible WR, Lauerer M, Schulze ED, Caboche M, Stitt M (1997b) Accumulation of nitrate in the shoot acts as a signal to regulate shoot-root allocation in tobacco. Plant J 11: 671-691
    • (1997) Plant J , vol.11 , pp. 671-691
    • Scheible, W.R.1    Lauerer, M.2    Schulze, E.D.3    Caboche, M.4    Stitt, M.5
  • 34
    • 0033765590 scopus 로고    scopus 로고
    • Reciprocal diurnal changes of phosphoenolpyruvate carboxylase expression and cytosolic pyruvate kinase, citrate synthase and NADP-isocitrate dehydrogenase expression regulate organic acid metabolism during nitrate assimilation in tobacco leaves
    • Scheible WR, Krapp A, Stitt M (2000) Reciprocal diurnal changes of phosphoenolpyruvate carboxylase expression and cytosolic pyruvate kinase, citrate synthase and NADP-isocitrate dehydrogenase expression regulate organic acid metabolism during nitrate assimilation in tobacco leaves. Plant Cell Environ 23: 1155-1168
    • (2000) Plant Cell Environ , vol.23 , pp. 1155-1168
    • Scheible, W.R.1    Krapp, A.2    Stitt, M.3
  • 35
    • 0037636377 scopus 로고    scopus 로고
    • Trehalose 6-phosphate is indispensable for carbohydrate utilization and growth in Arabidopsis thaliana
    • Schluepmann H, Pellny T, van Dijken A, Smeekens S, Paul M (2003) Trehalose 6-phosphate is indispensable for carbohydrate utilization and growth in Arabidopsis thaliana. Proc Natl Acad Sci USA 100: 6849-6854
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 6849-6854
    • Schluepmann, H.1    Pellny, T.2    Van Dijken, A.3    Smeekens, S.4    Paul, M.5
  • 36
    • 2942592057 scopus 로고    scopus 로고
    • Hydrogen peroxide mediates plant root cell response to nutrient deprivation
    • Shin R, Schachtman DP (2004) Hydrogen peroxide mediates plant root cell response to nutrient deprivation. Proc Natl Acad Sci USA 101: 8827-8832
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 8827-8832
    • Shin, R.1    Schachtman, D.P.2
  • 37
    • 0035845575 scopus 로고    scopus 로고
    • Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases
    • Shiu SH, Bleecker AB (2001) Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases. Proc Natl Acad Sci USA 98: 10763-10768
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 10763-10768
    • Shiu, S.H.1    Bleecker, A.B.2
  • 38
    • 0035983659 scopus 로고    scopus 로고
    • The lateral organ boundaries gene defines a novel plant-specific gene family
    • Shuai B, Reynaga-Pena CG, Springer PS (2002) The lateral organ boundaries gene defines a novel plant-specific gene family. Plant Physiol 129: 747-761
    • (2002) Plant Physiol , vol.129 , pp. 747-761
    • Shuai, B.1    Reynaga-Pena, C.G.2    Springer, P.S.3
  • 39
    • 0035544399 scopus 로고    scopus 로고
    • ABA plays a central role in mediating the regulatory effects of nitrate on root branching in Arabidopsis
    • Signora L, De Smet I, Foyer CH, Zhang H (2001) ABA plays a central role in mediating the regulatory effects of nitrate on root branching in Arabidopsis. Plant J 28: 655-662
    • (2001) Plant J , vol.28 , pp. 655-662
    • Signora, L.1    De Smet, I.2    Foyer, C.H.3    Zhang, H.4
  • 40
    • 0037270294 scopus 로고    scopus 로고
    • Molecular properties of the putative N sensor PII from Arabidopsis thaliana
    • Smith CS, Weljie AM, Moorhead GBG (2003) Molecular properties of the putative N sensor PII from Arabidopsis thaliana. Plant J 33: 353-360
    • (2003) Plant J , vol.33 , pp. 353-360
    • Smith, C.S.1    Weljie, A.M.2    Moorhead, G.B.G.3
  • 41
    • 0033151521 scopus 로고    scopus 로고
    • Nitrate regulation of metabolism and growth
    • Stitt M (1999) Nitrate regulation of metabolism and growth. Curr Opin Plant Biol 2: 178-186
    • (1999) Curr Opin Plant Biol , vol.2 , pp. 178-186
    • Stitt, M.1
  • 42
    • 0032991130 scopus 로고    scopus 로고
    • The molecular physiological basis for the interaction between elevated carbon dioxide and nutrients
    • Stitt M, Krapp A (1999) The molecular physiological basis for the interaction between elevated carbon dioxide and nutrients. Plant Cell Environ 22: 583-622
    • (1999) Plant Cell Environ , vol.22 , pp. 583-622
    • Stitt, M.1    Krapp, A.2
  • 46
    • 0033167032 scopus 로고    scopus 로고
    • Regulation of the hvst1 gene encoding a high-affinity sulfate transporter from Hordeum vulgare
    • Vidmar JJ, Schjoerring JK, Touraine B, Glass ADM (1999) Regulation of the hvst1 gene encoding a high-affinity sulfate transporter from Hordeum vulgare. Plant Mol Biol 40: 883-892
    • (1999) Plant Mol Biol , vol.40 , pp. 883-892
    • Vidmar, J.J.1    Schjoerring, J.K.2    Touraine, B.3    Glass, A.D.M.4
  • 47
    • 0037712997 scopus 로고    scopus 로고
    • The ubiquitin/26S proteasome pathway, the complex last chapter in the life of many plant proteins
    • Vierstra RD (2003) The ubiquitin/26S proteasome pathway, the complex last chapter in the life of many plant proteins. Trends Plant Sci 8: 135-142
    • (2003) Trends Plant Sci , vol.8 , pp. 135-142
    • Vierstra, R.D.1
  • 48
    • 0034817855 scopus 로고    scopus 로고
    • Nitrate-induced genes in tomato roots. Array analysis reveals novel genes that may play a role in N nutrition
    • Wang Y-H, Garvin DF, Kochian LV (2001) Nitrate-induced genes in tomato roots. Array analysis reveals novel genes that may play a role in N nutrition. Plant Physiol 127: 345-359
    • (2001) Plant Physiol , vol.127 , pp. 345-359
    • Wang, Y.-H.1    Garvin, D.F.2    Kochian, L.V.3
  • 49
    • 0033831570 scopus 로고    scopus 로고
    • Genomic analysis of a nutrient response in Arabidopsis reveals diverse expression patterns and novel metabolic and potential regulatory genes that are induced by nitrate
    • Wang R, Guegler K, LaBrie ST, Crawford NM (2000) Genomic analysis of a nutrient response in Arabidopsis reveals diverse expression patterns and novel metabolic and potential regulatory genes that are induced by nitrate. Plant Cell 12: 1491-1510
    • (2000) Plant Cell , vol.12 , pp. 1491-1510
    • Wang, R.1    Guegler, K.2    LaBrie, S.T.3    Crawford, N.M.4
  • 50
    • 0037783247 scopus 로고    scopus 로고
    • Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1000 rapidly responding genes new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism
    • Wang R, Okamoto M, Xing X, Crawford NM (2003) Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1000 rapidly responding genes new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism. Plant Physiol 132: 556-567
    • (2003) Plant Physiol , vol.132 , pp. 556-567
    • Wang, R.1    Okamoto, M.2    Xing, X.3    Crawford, N.M.4
  • 52
    • 0032536001 scopus 로고    scopus 로고
    • An Arabidopsis MADS box gene that controls nutrient-induced changes in root architecture
    • Zhang HM, Forde BG (1998) An Arabidopsis MADS box gene that controls nutrient-induced changes in root architecture. Science 279: 407-409
    • (1998) Science , vol.279 , pp. 407-409
    • Zhang, H.M.1    Forde, B.G.2
  • 53
    • 0342980368 scopus 로고    scopus 로고
    • A high affinity nitrate transport system from Chlamydomonas requires two gene products
    • Zhou JJ, Fernandez E, Galvan A, Miller AJ (2000) A high affinity nitrate transport system from Chlamydomonas requires two gene products. FEBS Lett 466: 225-227
    • (2000) FEBS Lett , vol.466 , pp. 225-227
    • Zhou, J.J.1    Fernandez, E.2    Galvan, A.3    Miller, A.J.4


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