-
1
-
-
0032211830
-
The cell biology of β-amyloid precursor protein, presenilin in Alzheimer's disease
-
Selkoe DJ. The cell biology of β-amyloid precursor protein, presenilin in Alzheimer's disease. Trends Cell Biol 8: 447-53 (1998).
-
(1998)
Trends Cell Biol
, vol.8
, pp. 447-453
-
-
Selkoe, D.J.1
-
2
-
-
0023105114
-
The precursor of Alzheimer's disease amyloid A4 protein resembles a cell-surface receptor
-
Kang J, Lemaire HG, Unterbeck A, Salbaum JM, Masters CL, Grzeschik KH, et al. The precursor of Alzheimer's disease amyloid A4 protein resembles a cell-surface receptor. Nature 325: 733-6 (1987).
-
(1987)
Nature
, vol.325
, pp. 733-736
-
-
Kang, J.1
Lemaire, H.G.2
Unterbeck, A.3
Salbaum, J.M.4
Masters, C.L.5
Grzeschik, K.H.6
-
3
-
-
10744219665
-
Solution NMR studies of the Aβ(1-40), Aβ(1-42) peptides establish that the Met35 oxidation state affects the mechanism of amyloid formation
-
Hou L, Shao H, Zhang Y, Li H, Menon NK, Neuhaus EB, et al. Solution NMR studies of the Aβ(1-40), Aβ(1-42) peptides establish that the Met35 oxidation state affects the mechanism of amyloid formation. J Am Chem Soc 126: 1992-2005 (2004).
-
(2004)
J Am Chem Soc
, vol.126
, pp. 1992-2005
-
-
Hou, L.1
Shao, H.2
Zhang, Y.3
Li, H.4
Menon, N.K.5
Neuhaus, E.B.6
-
4
-
-
23644452100
-
The Alzheimer beta-peptide shows temperature-dependent transitions between left-handed 3-helix, beta-strand, random coil secondary structures
-
Danielsson J, Jarvet J, Damberg P, Graslund A. The Alzheimer beta-peptide shows temperature-dependent transitions between left-handed 3-helix, beta-strand, random coil secondary structures. FEBS J 272: 3938-49 (2005).
-
(2005)
FEBS J
, vol.272
, pp. 3938-3949
-
-
Danielsson, J.1
Jarvet, J.2
Damberg, P.3
Graslund, A.4
-
5
-
-
33645038471
-
A specific amyloid-beta protein assembly in the brain impairs memory
-
Lesne S, Koh MT, Kotilinek L, Kayed R, Glabe CG, Yang A, et al. A specific amyloid-beta protein assembly in the brain impairs memory. Nature 440: 352-7 (2006).
-
(2006)
Nature
, vol.440
, pp. 352-357
-
-
Lesne, S.1
Koh, M.T.2
Kotilinek, L.3
Kayed, R.4
Glabe, C.G.5
Yang, A.6
-
6
-
-
0037041426
-
Naturally secreted oligomers of amyloid beta protein potently inhibit hippocampal long-term potentiation in vivo
-
Walsh DM, Klyubin I, Fadeeva JV, Cullen WK, Anwyl R, Wolfe MS, et al. Naturally secreted oligomers of amyloid beta protein potently inhibit hippocampal long-term potentiation in vivo. Nature 416: 535-9 (2002).
-
(2002)
Nature
, vol.416
, pp. 535-539
-
-
Walsh, D.M.1
Klyubin, I.2
Fadeeva, J.V.3
Cullen, W.K.4
Anwyl, R.5
Wolfe, M.S.6
-
7
-
-
33744966120
-
High resolution scanning tunnelling microscopy of the beta-amyloid protein (Aβ1-40) of Alzheimer's disease suggests a novel mechanism of oligomer assembly
-
Losic D, Martin LL, Mechler A, Aguilar MI, Small DH. High resolution scanning tunnelling microscopy of the beta-amyloid protein (Aβ1-40) of Alzheimer's disease suggests a novel mechanism of oligomer assembly. J Struct Biol 155: 104-10 (2006).
-
(2006)
J Struct Biol
, vol.155
, pp. 104-110
-
-
Losic, D.1
Martin, L.L.2
Mechler, A.3
Aguilar, M.I.4
Small, D.H.5
-
8
-
-
0034725656
-
A conformation change in the carboxyl terminus of Alzheimer's Aβ(1-40) accompanies the transition from dimer to fibril as revealed by fluorescence quenching analysis
-
Garzon-Rodriguez W, Vega A, Sepulveda-Becerra M, Milton S, Johnson DA, Yatsimirsky AK, et al. A conformation change in the carboxyl terminus of Alzheimer's Aβ(1-40) accompanies the transition from dimer to fibril as revealed by fluorescence quenching analysis. J Biol Chem 275: 22645-9 (2000).
-
(2000)
J Biol Chem
, vol.275
, pp. 22645-22649
-
-
Garzon-Rodriguez, W.1
Vega, A.2
Sepulveda-Becerra, M.3
Milton, S.4
Johnson, D.A.5
Yatsimirsky, A.K.6
-
9
-
-
33747652958
-
Distinct early folding, aggregation properties of Alzheimer amyloid-beta peptides Aβ40, Aβ42: Stable trimer or tetramer formation by Aβ42
-
Chen YR, Glabe CG. Distinct early folding, aggregation properties of Alzheimer amyloid-beta peptides Aβ40, Aβ42: stable trimer or tetramer formation by Aβ42. J Biol Chem 281: 24414-22 (2006).
-
(2006)
J Biol Chem
, vol.281
, pp. 24414-24422
-
-
Chen, Y.R.1
Glabe, C.G.2
-
10
-
-
0041816383
-
Elucidation of primary structure elements controlling early amyloid beta-protein oligomerization
-
Bitan G, Vollers SS, Teplow DB. Elucidation of primary structure elements controlling early amyloid beta-protein oligomerization. J Biol Chem 278: 34882-9 (2003).
-
(2003)
J Biol Chem
, vol.278
, pp. 34882-34889
-
-
Bitan, G.1
Vollers, S.S.2
Teplow, D.B.3
-
11
-
-
0034677660
-
Structural studies of soluble oligomers of the Alzheimer beta-amyloid peptide
-
Huang TH, Yang DS, Plaskos NP, Go S, Yip CM, Fraser PE, et al. Structural studies of soluble oligomers of the Alzheimer beta-amyloid peptide. J Mol Biol 297: 73-87 (2000).
-
(2000)
J Mol Biol
, vol.297
, pp. 73-87
-
-
Huang, T.H.1
Yang, D.S.2
Plaskos, N.P.3
Go, S.4
Yip, C.M.5
Fraser, P.E.6
-
12
-
-
22444449900
-
On the nucleation of amyloid beta-protein monomer folding
-
Lazo ND, Grant MA, Condron MC, Rigby AC, Teplow DB. On the nucleation of amyloid beta-protein monomer folding. Protein Sci 14: 1581-96 (2005).
-
(2005)
Protein Sci
, vol.14
, pp. 1581-1596
-
-
Lazo, N.D.1
Grant, M.A.2
Condron, M.C.3
Rigby, A.C.4
Teplow, D.B.5
-
13
-
-
17644397372
-
Aβ40-Lactam(D23/K28) models a conformation highly favorable for nucleation of amyloid
-
Sciarretta KL, Gordon DJ, Petkova AT, Tycko R, Meredith SC. Aβ40-Lactam(D23/K28) models a conformation highly favorable for nucleation of amyloid. Biochemistry 44: 6003-14 (2005).
-
(2005)
Biochemistry
, vol.44
, pp. 6003-6014
-
-
Sciarretta, K.L.1
Gordon, D.J.2
Petkova, A.T.3
Tycko, R.4
Meredith, S.C.5
-
14
-
-
0037168655
-
A structural model for Alzheimer's beta-amyloid fibrils based on experimental constraints from solid state NMR
-
Petkova AT, Ishii Y, Balbach JJ, Antzutkin ON, Leapman RD, Delaglio F, et al. A structural model for Alzheimer's beta-amyloid fibrils based on experimental constraints from solid state NMR. Proc Natl Acad Sci USA 99: 16742-7 (2002).
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 16742-16747
-
-
Petkova, A.T.1
Ishii, Y.2
Balbach, J.J.3
Antzutkin, O.N.4
Leapman, R.D.5
Delaglio, F.6
-
15
-
-
33748689799
-
Simulations as analytical tools to understand protein aggregation, predict amyloid conformation
-
Ma B, Nussinov R. Simulations as analytical tools to understand protein aggregation, predict amyloid conformation. Curr Opin Chem Biol 10: 445-52 (2006).
-
(2006)
Curr Opin Chem Biol
, vol.10
, pp. 445-452
-
-
Ma, B.1
Nussinov, R.2
-
16
-
-
28444442999
-
3D structure of Alzheimer's amyloid-β(1-42) fibrils
-
Luhrs T, Ritter C, Adrian M, Riek-Loher D, Bohrmann B, Dobeli H, et al 3D structure of Alzheimer's amyloid-β(1-42) fibrils. Proc Natl Acad Sci USA 102: 17342-7 (2005).
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 17342-17347
-
-
Luhrs, T.1
Ritter, C.2
Adrian, M.3
Riek-Loher, D.4
Bohrmann, B.5
Dobeli, H.6
-
17
-
-
30744433878
-
Experimental constraints on quaternary structure in Alzheimer's beta-amyloid fibrils
-
Petkova AT, Yau WM, Tycko R. Experimental constraints on quaternary structure in Alzheimer's beta-amyloid fibrils. Biochemistry 45: 498-512 (2006).
-
(2006)
Biochemistry
, vol.45
, pp. 498-512
-
-
Petkova, A.T.1
Yau, W.M.2
Tycko, R.3
-
18
-
-
28844499140
-
Exploring the early steps of amyloid peptide aggregation by computers
-
Mousseau N, Derreumaux P. Exploring the early steps of amyloid peptide aggregation by computers. Acc Chem Res 38: 885-91 (2005).
-
(2005)
Acc Chem Res
, vol.38
, pp. 885-891
-
-
Mousseau, N.1
Derreumaux, P.2
-
19
-
-
33846073514
-
Computer simulations of Alzheimer's amyloid beta-protein folding, assembly
-
Urbanc B, Cruz L, Teplow DB, Stanley HE. Computer simulations of Alzheimer's amyloid beta-protein folding, assembly. Curr Alzheimer Res 3: 493-504 (2006).
-
(2006)
Curr Alzheimer Res
, vol.3
, pp. 493-504
-
-
Urbanc, B.1
Cruz, L.2
Teplow, D.B.3
Stanley, H.E.4
-
20
-
-
33749642847
-
Computational approaches to fibril structure, formation
-
Hall CK, Wagoner VA. Computational approaches to fibril structure, formation. Methods Enzymol 412: 338-65 (2006).
-
(2006)
Methods Enzymol
, vol.412
, pp. 338-365
-
-
Hall, C.K.1
Wagoner, V.A.2
-
21
-
-
34247245185
-
Peptide self-assembly at the nanoscale: A challenging target for computational, experimental biotechnology
-
Colombo G, Soto P, Gazit E. Peptide self-assembly at the nanoscale: a challenging target for computational, experimental biotechnology. Trends Biotechnol 25: 211-8 (2007).
-
(2007)
Trends Biotechnol
, vol.25
, pp. 211-218
-
-
Colombo, G.1
Soto, P.2
Gazit, E.3
-
22
-
-
34548804689
-
Computational simulation of the early steps of protein aggregation
-
Wei G, Mousseau N, Derreumaux P. Computational simulation of the early steps of protein aggregation. Prion 1: 1-6 (2007).
-
(2007)
Prion
, vol.1
, pp. 1-6
-
-
Wei, G.1
Mousseau, N.2
Derreumaux, P.3
-
23
-
-
0034344157
-
Ab initio polypeptide structure prediction
-
Derreumaux P. Ab initio polypeptide structure prediction. Theor Chem Acc 104: 1-6 (2000).
-
(2000)
Theor Chem Acc
, vol.104
, pp. 1-6
-
-
Derreumaux, P.1
-
24
-
-
29444439999
-
Solvent, mutation effects on the nucleation of amyloid beta-protein folding
-
Cruz L, Urbanc B, Borreguero JM, Lazo ND, Teplow DB, Stanley HE. Solvent, mutation effects on the nucleation of amyloid beta-protein folding. Proc Natl Acad Sci USA 102: 18258-63 (2005).
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 18258-18263
-
-
Cruz, L.1
Urbanc, B.2
Borreguero, J.M.3
Lazo, N.D.4
Teplow, D.B.5
Stanley, H.E.6
-
25
-
-
33744467718
-
Structure of the 21-30 fragment of amyloid beta-protein
-
Baumketner A, Bernstein SL, Wyttenbach T, Lazo ND, Teplow DB, Bowers MT, et al. Structure of the 21-30 fragment of amyloid beta-protein. Protein Sci 15: 1239-47 (2006).
-
(2006)
Protein Sci
, vol.15
, pp. 1239-1247
-
-
Baumketner, A.1
Bernstein, S.L.2
Wyttenbach, T.3
Lazo, N.D.4
Teplow, D.B.5
Bowers, M.T.6
-
26
-
-
17844410343
-
Folding events in the 21-30 region of amyloid beta-protein (Aβ) studied in silico
-
Borreguero JM, Urbanc B, Lazo ND, Buldyrev SV, Teplow DB, Stanley HE. Folding events in the 21-30 region of amyloid beta-protein (Aβ) studied in silico. Proc Natl Acad Sci USA 102: 6015-20 (2005).
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 6015-6020
-
-
Borreguero, J.M.1
Urbanc, B.2
Lazo, N.D.3
Buldyrev, S.V.4
Teplow, D.B.5
Stanley, H.E.6
-
27
-
-
9244260521
-
Molecular dynamics simulations of spontaneous fibril formation by random-coil peptides
-
Nguyen HD, Hall CK. Molecular dynamics simulations of spontaneous fibril formation by random-coil peptides. Proc Natl Acad Sci USA 101: 16180-5 (2004).
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 16180-16185
-
-
Nguyen, H.D.1
Hall, C.K.2
-
28
-
-
33748277992
-
The conformations of the amyloid-beta(21-30) fragment can be described by three families in solution
-
Chen W, Mousseau N, Derreumaux P. The conformations of the amyloid-beta(21-30) fragment can be described by three families in solution. J Chem Phys 125: 084911 (2006).
-
(2006)
J Chem Phys
, vol.125
, pp. 084911
-
-
Chen, W.1
Mousseau, N.2
Derreumaux, P.3
-
29
-
-
11244291006
-
Folding Trp-cage to NMR resolution native structure using a coarse-grained protein model
-
Ding F, Buldyrev SV, Dokholyan NV. Folding Trp-cage to NMR resolution native structure using a coarse-grained protein model. Biophys J 88: 147-55 (2005).
-
(2005)
Biophys J
, vol.88
, pp. 147-155
-
-
Ding, F.1
Buldyrev, S.V.2
Dokholyan, N.V.3
-
30
-
-
0035003162
-
Sampling activated mechanisms in proteins with the activation-relaxation technique
-
Mousseau N, Derreumaux P, Barkema GT, Malek R. Sampling activated mechanisms in proteins with the activation-relaxation technique. J Mol Graph Model 19: 78-86 (2001).
-
(2001)
J Mol Graph Model
, vol.19
, pp. 78-86
-
-
Mousseau, N.1
Derreumaux, P.2
Barkema, G.T.3
Malek, R.4
-
31
-
-
0037461487
-
Exploring the energy landscape of proteins: A characterization of the activation-relaxation technique
-
Wei G, Mousseau N, Derreumaux P. Exploring the energy landscape of proteins: A characterization of the activation-relaxation technique. J Chem Phys 117: 11379-87 (2002).
-
(2002)
J Chem Phys
, vol.117
, pp. 11379-11387
-
-
Wei, G.1
Mousseau, N.2
Derreumaux, P.3
-
32
-
-
0142116251
-
Sampling the complex energy landscape of a simple β-hairpin
-
Wei G, Derreumaux P, Mousseau N. Sampling the complex energy landscape of a simple β-hairpin. J Chem Phys 119: 6403-6 (2003).
-
(2003)
J Chem Phys
, vol.119
, pp. 6403-6406
-
-
Wei, G.1
Derreumaux, P.2
Mousseau, N.3
-
33
-
-
0001170125
-
-
Derreumaux P. A diffusion process-controlled Monte Carlo method for finding the global energy minimum of a polypeptide chain. I. Formulation, test on a hexadecapeptide. J Chem Phys 106: 5260-70 (1997).
-
Derreumaux P. A diffusion process-controlled Monte Carlo method for finding the global energy minimum of a polypeptide chain. I. Formulation, test on a hexadecapeptide. J Chem Phys 106: 5260-70 (1997).
-
-
-
-
34
-
-
0031559545
-
Folding a 20 amino acid alpha-beta peptide with the diffusion process-controlled Monte Carlo method
-
Derreumaux P. Folding a 20 amino acid alpha-beta peptide with the diffusion process-controlled Monte Carlo method. J Chem Phys 107: 1941-7 (1997).
-
(1997)
J Chem Phys
, vol.107
, pp. 1941-1947
-
-
Derreumaux, P.1
-
35
-
-
0001418816
-
From polypeptide sequences to structures using Monte Carlo simulations, an optimized potential
-
Derreumaux P. From polypeptide sequences to structures using Monte Carlo simulations, an optimized potential. J Chem Phys 111: 2301-10 (1999).
-
(1999)
J Chem Phys
, vol.111
, pp. 2301-2310
-
-
Derreumaux, P.1
-
36
-
-
0034214823
-
Generating ensemble averages for small proteins from extended conformations by Monte Carlo simulations
-
Derreumaux P. Generating ensemble averages for small proteins from extended conformations by Monte Carlo simulations. Phys Rev Lett 85: 206-9 (2000).
-
(2000)
Phys Rev Lett
, vol.85
, pp. 206-209
-
-
Derreumaux, P.1
-
37
-
-
0034505723
-
Dynamics of lennard-jones clusters: A characterization of the activation-relaxation technique
-
Malek R, Mousseau N. Dynamics of lennard-jones clusters: A characterization of the activation-relaxation technique. Phys Rev E 62: 7723-8 (2000).
-
(2000)
Phys Rev E
, vol.62
, pp. 7723-7728
-
-
Malek, R.1
Mousseau, N.2
-
38
-
-
4043157260
-
Event-Based Relaxation of Continuous Disordered Systems
-
Barkema GT, Mousseau N. Event-Based Relaxation of Continuous Disordered Systems. Phys Rev Lett 77: 4358-61 (1996).
-
(1996)
Phys Rev Lett
, vol.77
, pp. 4358-4361
-
-
Barkema, G.T.1
Mousseau, N.2
-
39
-
-
0346457114
-
The antitumor properties of the alpha3(IV)-(185-203) peptide from the NC1 domain of type IV collagen (tumstatin) are conformation-dependent
-
Floquet N, Pasco S, Ramont L, Derreumaux P, Laronze JY, Nuzillard JM, et al. The antitumor properties of the alpha3(IV)-(185-203) peptide from the NC1 domain of type IV collagen (tumstatin) are conformation-dependent. J Biol Chem 279: 2091-100 (2004).
-
(2004)
J Biol Chem
, vol.279
, pp. 2091-2100
-
-
Floquet, N.1
Pasco, S.2
Ramont, L.3
Derreumaux, P.4
Laronze, J.Y.5
Nuzillard, J.M.6
-
40
-
-
0037103928
-
Insight into protein topology from Monte Carlo simulations
-
Derreumaux P. Insight into protein topology from Monte Carlo simulations. J Chem Phys 117: 3499-503 (2002).
-
(2002)
J Chem Phys
, vol.117
, pp. 3499-3503
-
-
Derreumaux, P.1
-
41
-
-
3142737884
-
Complex folding pathways in a simple beta-hairpin
-
Wei G, Mousseau N, Derreumaux P. Complex folding pathways in a simple beta-hairpin. Proteins 56: 464-74 (2004).
-
(2004)
Proteins
, vol.56
, pp. 464-474
-
-
Wei, G.1
Mousseau, N.2
Derreumaux, P.3
-
42
-
-
3142568651
-
Pathway complexity of Alzheimer's β-amyloid Aβ(16-22) peptide assembly
-
Santini S, Wei G, Mousseau N, Derreumaux P. Pathway complexity of Alzheimer's β-amyloid Aβ(16-22) peptide assembly. Structure 12: 1245-55 (2004).
-
(2004)
Structure
, vol.12
, pp. 1245-1255
-
-
Santini, S.1
Wei, G.2
Mousseau, N.3
Derreumaux, P.4
-
43
-
-
4544283591
-
In silico assembly of Alzheimer's Aβ(16-22) peptide into β-sheets
-
Santini S, Mousseau M, Derreumaux P. In silico assembly of Alzheimer's Aβ(16-22) peptide into β-sheets. J Am Chem Soc 126: 11509-16 (2004).
-
(2004)
J Am Chem Soc
, vol.126
, pp. 11509-11516
-
-
Santini, S.1
Mousseau, M.2
Derreumaux, P.3
-
44
-
-
33748278029
-
Structures of soluble amyloid oligomers from computer simulations
-
Melquiond A, Mousseau N, Derreumaux P. Structures of soluble amyloid oligomers from computer simulations. Proteins 65: 180-191 (2006).
-
(2006)
Proteins
, vol.65
, pp. 180-191
-
-
Melquiond, A.1
Mousseau, N.2
Derreumaux, P.3
-
45
-
-
25844493690
-
Experimental evidence for the reorganization of beta-strands within aggregates of the Aβ(16-22) peptide
-
Petty SA, Decatur SM. Experimental evidence for the reorganization of beta-strands within aggregates of the Aβ(16-22) peptide. J Am Chem Soc 127: 13488-9 (2005).
-
(2005)
J Am Chem Soc
, vol.127
, pp. 13488-13489
-
-
Petty, S.A.1
Decatur, S.M.2
-
46
-
-
34548809141
-
A coarse-grained protein force field for folding, structure prediction
-
Maupetit J, Tuffery P, Derreumaux P. A coarse-grained protein force field for folding, structure prediction. Proteins 69: 394-408 (2007).
-
(2007)
Proteins
, vol.69
, pp. 394-408
-
-
Maupetit, J.1
Tuffery, P.2
Derreumaux, P.3
-
47
-
-
0034724375
-
Two-dimensional structure of β-amyloid(10-35) fibrils
-
Benzinger TL, Gregory DM, Burkoth TS, Miller-Auer H, Lynn DG, Botto RE, et al. Two-dimensional structure of β-amyloid(10-35) fibrils. Biochemistry 39: 3491-9 (2000).
-
(2000)
Biochemistry
, vol.39
, pp. 3491-3499
-
-
Benzinger, T.L.1
Gregory, D.M.2
Burkoth, T.S.3
Miller-Auer, H.4
Lynn, D.G.5
Botto, R.E.6
-
48
-
-
33744831968
-
Polymorphic fibril formation by residues 10-40 of the Alzheimer's β-amyloid peptide
-
Paravastu AK, Petkova AT, Tycko R. Polymorphic fibril formation by residues 10-40 of the Alzheimer's β-amyloid peptide. Biophys J 90: 4618-29 (2006).
-
(2006)
Biophys J
, vol.90
, pp. 4618-4629
-
-
Paravastu, A.K.1
Petkova, A.T.2
Tycko, R.3
-
49
-
-
33846324298
-
The structure of the Alzheimer amyloid beta 10-35 peptide probed through replica-exchange molecular dynamics simulations in explicit solvent
-
Baumketner A, Shea JE. The structure of the Alzheimer amyloid beta 10-35 peptide probed through replica-exchange molecular dynamics simulations in explicit solvent. J Mol Biol 366: 275-85 (2007).
-
(2007)
J Mol Biol
, vol.366
, pp. 275-285
-
-
Baumketner, A.1
Shea, J.E.2
-
50
-
-
33845570428
-
Dynamics of Asp23-Lys28 salt-bridge formation in Aβ10-35 monomers
-
Tarus B, Straub JE, Thirumalai D. Dynamics of Asp23-Lys28 salt-bridge formation in Aβ10-35 monomers. J Am Chem Soc 128: 16159-68 (2006).
-
(2006)
J Am Chem Soc
, vol.128
, pp. 16159-16168
-
-
Tarus, B.1
Straub, J.E.2
Thirumalai, D.3
-
51
-
-
0033855845
-
The Alzheimer's peptide Aβ adopts a collapsed coil structure in water
-
Zhang S, Iwata K, Lachenmann MJ, Peng JW, Li S, Stimson ER, et al. The Alzheimer's peptide Aβ adopts a collapsed coil structure in water. J Struct Biol 130: 130-41 (2000).
-
(2000)
J Struct Biol
, vol.130
, pp. 130-141
-
-
Zhang, S.1
Iwata, K.2
Lachenmann, M.J.3
Peng, J.W.4
Li, S.5
Stimson, E.R.6
-
52
-
-
27644540293
-
A strand-loop-strand structure is a possible intermediate in fibril elongation: Long time simulations of amyloid-β peptide (10-35)
-
Han W, Wu YD. A strand-loop-strand structure is a possible intermediate in fibril elongation: long time simulations of amyloid-β peptide (10-35). J Am Chem Soc 127: 15408-16 (2005).
-
(2005)
J Am Chem Soc
, vol.127
, pp. 15408-15416
-
-
Han, W.1
Wu, Y.D.2
-
53
-
-
17244372981
-
Conformational transition of amyloid β-peptide
-
Xu Y, Shen J, Luo X, Zhu W, Chen K, Ma J, et al. Conformational transition of amyloid β-peptide. Proc Natl Acad Sci USA 102: 5403-7 (2005).
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 5403-5407
-
-
Xu, Y.1
Shen, J.2
Luo, X.3
Zhu, W.4
Chen, K.5
Ma, J.6
-
54
-
-
30344461291
-
Misfolding of the amyloid β-protein: A molecular dynamics study
-
Flock D, Colacino S, Colombo G, Di Nola A. Misfolding of the amyloid β-protein: a molecular dynamics study. Proteins 62: 183-92 (2006).
-
(2006)
Proteins
, vol.62
, pp. 183-192
-
-
Flock, D.1
Colacino, S.2
Colombo, G.3
Di Nola, A.4
-
55
-
-
33645396508
-
All-atom molecular dynamic studies of the full-length β-amyloid peptides
-
Luttmann E, Fels G. All-atom molecular dynamic studies of the full-length β-amyloid peptides, Chem Phys 323: 138-47 (2006).
-
(2006)
Chem Phys
, vol.323
, pp. 138-147
-
-
Luttmann, E.1
Fels, G.2
-
56
-
-
32344451179
-
The alpha-to-beta conformational transition of Alzheimer's Aβ(1-42) peptide in aqueous media is reversible: A step by step conformational analysis suggests the location of beta conformation seeding
-
Tomaselli S, Esposito V, Vangone P, van Nuland NA, Bonvin AM, Guerrini R, et al. The alpha-to-beta conformational transition of Alzheimer's Aβ(1-42) peptide in aqueous media is reversible: a step by step conformational analysis suggests the location of beta conformation seeding. Chembiochem 7: 257-67 (2006).
-
(2006)
Chembiochem
, vol.7
, pp. 257-267
-
-
Tomaselli, S.1
Esposito, V.2
Vangone, P.3
van Nuland, N.A.4
Bonvin, A.M.5
Guerrini, R.6
-
57
-
-
45249097259
-
-
Lam A, Urbanc B, Borreguero JM, Lazo ND, Teplow DB, Stanley HE. Discrete molecular dynamics study of Alzheimer Amyloid β-protein (Aβ) folding. Proceedings of the 2006 International Conference on Bioinformatics & Computational Biology pp 322-28 (2006). Editors Hamid R. Arabnia, Homayoun Valafar, CSREA Press (ISBN).
-
Lam A, Urbanc B, Borreguero JM, Lazo ND, Teplow DB, Stanley HE. Discrete molecular dynamics study of Alzheimer Amyloid β-protein (Aβ) folding. Proceedings of the 2006 International Conference on Bioinformatics & Computational Biology pp 322-28 (2006). Editors Hamid R. Arabnia, Homayoun Valafar, CSREA Press (ISBN).
-
-
-
-
58
-
-
34248194356
-
Molecular dynamics study of the beta-amyloid peptide of Alzheimer's disease, its divalent copper complexes
-
Raffa DF, Rauk A. Molecular dynamics study of the beta-amyloid peptide of Alzheimer's disease, its divalent copper complexes. J Phys Chem B 111: 3789-99 (2007).
-
(2007)
J Phys Chem B
, vol.111
, pp. 3789-3799
-
-
Raffa, D.F.1
Rauk, A.2
-
59
-
-
33644526613
-
Amyloid beta-protein monomer structure: A computational, experimental study
-
Baumketner A, Bernstein SL, Wyttenbach T, Bitan G, Teplow DB, Bowers MT, et al. Amyloid beta-protein monomer structure: a computational, experimental study. Protein Sci 15: 420-8 (2006).
-
(2006)
Protein Sci
, vol.15
, pp. 420-428
-
-
Baumketner, A.1
Bernstein, S.L.2
Wyttenbach, T.3
Bitan, G.4
Teplow, D.B.5
Bowers, M.T.6
-
60
-
-
34247234602
-
The Alzheimer's peptides Abeta40, 42 adopt distinct conformations in water: A combined MD / NMR study
-
Sgourakis NG, Yan Y, McCallum SA, Wang C, Garcia AE. The Alzheimer's peptides Abeta40, 42 adopt distinct conformations in water: a combined MD / NMR study. J Mol Biol 368: 1448-57 (2007).
-
(2007)
J Mol Biol
, vol.368
, pp. 1448-1457
-
-
Sgourakis, N.G.1
Yan, Y.2
McCallum, S.A.3
Wang, C.4
Garcia, A.E.5
-
61
-
-
33845802653
-
-
Lim KH, Collver HH, Le YT, Nagchowdhuri P, Kenney JM. Characterizations of distinct amyloidogenic conformations of the Abeta(1-40), (1-42) peptides. Biochem Biophys Re. Commun 353: 443-9 (2007).
-
Lim KH, Collver HH, Le YT, Nagchowdhuri P, Kenney JM. Characterizations of distinct amyloidogenic conformations of the Abeta(1-40), (1-42) peptides. Biochem Biophys Re. Commun 353: 443-9 (2007).
-
-
-
-
62
-
-
16644379264
-
Natural oligomers of the amyloid-beta protein specifically disrupt cognitive function
-
Cleary JP, Walsh DM, Hofmeister JJ, Shankar GM, Kuskowski MA, Selkoe DJ, et al. Natural oligomers of the amyloid-beta protein specifically disrupt cognitive function. Nat Neurosci 8: 79-84 (2005).
-
(2005)
Nat Neurosci
, vol.8
, pp. 79-84
-
-
Cleary, J.P.1
Walsh, D.M.2
Hofmeister, J.J.3
Shankar, G.M.4
Kuskowski, M.A.5
Selkoe, D.J.6
-
63
-
-
11844255790
-
Probing the initial stage of aggregation of the Abeta(10-35)-protein: Assessing the propensity for peptide dimerization
-
Tarus B, Straub JE, Thirumalai D. Probing the initial stage of aggregation of the Abeta(10-35)-protein: assessing the propensity for peptide dimerization. J Mol Biol 345: 1141-56 (2005).
-
(2005)
J Mol Biol
, vol.345
, pp. 1141-1156
-
-
Tarus, B.1
Straub, J.E.2
Thirumalai, D.3
-
64
-
-
33644768461
-
Amyloid beta-peptide oligomerization in silico: Dimer, trimer
-
Jang S, Shin S. Amyloid beta-peptide oligomerization in silico: dimer, trimer. J Phys Chem B 110: 1955-8 (2006).
-
(2006)
J Phys Chem B
, vol.110
, pp. 1955-1958
-
-
Jang, S.1
Shin, S.2
-
65
-
-
10644242867
-
Molecular dynamics simulation of amyloid beta dimer formation
-
Urbanc B, Cruz L, Ding F, Sammond D, Khare S, Buldyrev SV, et al. Molecular dynamics simulation of amyloid beta dimer formation. Biophys J 87: 2310-21 (2004).
-
(2004)
Biophys J
, vol.87
, pp. 2310-2321
-
-
Urbanc, B.1
Cruz, L.2
Ding, F.3
Sammond, D.4
Khare, S.5
Buldyrev, S.V.6
-
66
-
-
33751218920
-
Impact of the mutation A21G (Flemish variant) on Alzheimer's beta-amyloid dimers by molecular dynamics simulations
-
Huet A, Derreumaux P. Impact of the mutation A21G (Flemish variant) on Alzheimer's beta-amyloid dimers by molecular dynamics simulations. Biophys J 91: 3829-40 (2006).
-
(2006)
Biophys J
, vol.91
, pp. 3829-3840
-
-
Huet, A.1
Derreumaux, P.2
-
67
-
-
33846234246
-
Coarse-grained protein molecular dynamics simulations
-
Derreumaux P, Mousseau N. Coarse-grained protein molecular dynamics simulations. J Chem Phys 126: 025101 (2007).
-
(2007)
J Chem Phys
, vol.126
, pp. 025101
-
-
Derreumaux, P.1
Mousseau, N.2
-
68
-
-
45249093147
-
Self-assembly of amyloid-forming peptides using molecular dynamics simulations, the OPEP coarse-grained force field
-
Wei G, Song W, Derreumaux P, Mousseau N. Self-assembly of amyloid-forming peptides using molecular dynamics simulations, the OPEP coarse-grained force field. Front Biosci 13: 4517 (2008).
-
(2008)
Front Biosci
, vol.13
, pp. 4517
-
-
Wei, G.1
Song, W.2
Derreumaux, P.3
Mousseau, N.4
-
69
-
-
0033617220
-
A molecular model of Alzheimer amyloid beta-peptide fibril formation
-
Tjernberg LO, Callaway DJ, Tjernberg A, Hahne S, Lilliehook C, Terenius L, et al. A molecular model of Alzheimer amyloid beta-peptide fibril formation. J Biol Chem 274: 12619-25 (1999).
-
(1999)
J Biol Chem
, vol.274
, pp. 12619-12625
-
-
Tjernberg, L.O.1
Callaway, D.J.2
Tjernberg, A.3
Hahne, S.4
Lilliehook, C.5
Terenius, L.6
-
70
-
-
33847078824
-
Probing amyloid fibril formation of the NFGAIL peptide by computer simulations
-
Melquiond A, Gelly JC, Mousseau N, Derreumaux P. Probing amyloid fibril formation of the NFGAIL peptide by computer simulations. J Chem Phys 126: 065101 (2007).
-
(2007)
J Chem Phys
, vol.126
, pp. 065101
-
-
Melquiond, A.1
Gelly, J.C.2
Mousseau, N.3
Derreumaux, P.4
-
71
-
-
0037174835
-
Methionine 35 oxidation reduces fibril assembly of the amyloid abeta-(1-42) peptide of Alzheimer's disease
-
Hou L, Kang I, Marchant RE, Zagorski MG. Methionine 35 oxidation reduces fibril assembly of the amyloid abeta-(1-42) peptide of Alzheimer's disease. J Biol Chem 277: 40173-6 (2002).
-
(2002)
J Biol Chem
, vol.277
, pp. 40173-40176
-
-
Hou, L.1
Kang, I.2
Marchant, R.E.3
Zagorski, M.G.4
-
72
-
-
33747484171
-
N-Methylated peptide inhibitors of beta-amyloid aggregation, toxicity: Optimization of the inhibitor structure
-
Kokkoni N, Stott K, Amijee H, Mason JM, Doig AJ. N-Methylated peptide inhibitors of beta-amyloid aggregation, toxicity: Optimization of the inhibitor structure. Biochemistry 45:9906-18 (2006).
-
(2006)
Biochemistry
, vol.45
, pp. 9906-9918
-
-
Kokkoni, N.1
Stott, K.2
Amijee, H.3
Mason, J.M.4
Doig, A.J.5
|