메뉴 건너뛰기




Volumn 428, Issue , 2007, Pages 1-31

Overview and introduction to clinical proteomics

Author keywords

Biomarker; Biomarker panel; Biorepository; Body fluids; Clinical proteomics; Depletion; Multidimensional fractionation; Specimen bank; Translational proteomics

Indexed keywords

BIOLOGICAL MARKER;

EID: 40549106432     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: None     Document Type: Article
Times cited : (22)

References (98)
  • 2
    • 28544446695 scopus 로고    scopus 로고
    • Biomarkers in cancer staging, prognosis and treatment selection
    • Ludwig, J. A. and Weinstein, J. N. (2005) Biomarkers in cancer staging, prognosis and treatment selection. Nat. Rev. Cancer 5, 845-856.
    • (2005) Nat. Rev. Cancer , vol.5 , pp. 845-856
    • Ludwig, J.A.1    Weinstein, J.N.2
  • 4
    • 33747030845 scopus 로고    scopus 로고
    • Protein biomarker discovery and validation: The long and uncertain path to clinical utility
    • Rifai, N., Gillette, M. A., and Carr, S. A. (2006) Protein biomarker discovery and validation: the long and uncertain path to clinical utility. Nat. Biotechnol. 24, 97-983.
    • (2006) Nat. Biotechnol , vol.24 , pp. 97-983
    • Rifai, N.1    Gillette, M.A.2    Carr, S.A.3
  • 7
    • 0036408225 scopus 로고    scopus 로고
    • Use of laser capture microdissection to selectively obtain distinct populations of cells for proteomic analysis
    • Craven, R. A. and Banks, R. E. (2002) Use of laser capture microdissection to selectively obtain distinct populations of cells for proteomic analysis. Methods Enzymol. 356, 33-49.
    • (2002) Methods Enzymol , vol.356 , pp. 33-49
    • Craven, R.A.1    Banks, R.E.2
  • 10
    • 0037438998 scopus 로고    scopus 로고
    • Lung cancer screening with helical computed tomography in older adult smokers: A decision and cost-effectiveness analysis
    • Mahadevia, P. J., Fleisher, L. A., Frick, K. D., Eng, J., Goodman, S. N., and Powe, N. R. (2003) Lung cancer screening with helical computed tomography in older adult smokers: a decision and cost-effectiveness analysis. JAMA 289, 313-322.
    • (2003) JAMA , vol.289 , pp. 313-322
    • Mahadevia, P.J.1    Fleisher, L.A.2    Frick, K.D.3    Eng, J.4    Goodman, S.N.5    Powe, N.R.6
  • 12
    • 24044486897 scopus 로고    scopus 로고
    • Clinical cancer proteomics: Promises and pitfalls
    • Alaiya, A., Al-Mohanna, M., and Under, S. (2005) Clinical cancer proteomics: promises and pitfalls. J. Proteome Res. 4, 1213-1222.
    • (2005) J. Proteome Res , vol.4 , pp. 1213-1222
    • Alaiya, A.1    Al-Mohanna, M.2    Under, S.3
  • 13
    • 27644448975 scopus 로고    scopus 로고
    • Microheterogeneity of transthyretin in serum and ascitic fluid of ovarian cancer patients
    • Gericke, B., Raila, J., Sehouli, J., Haebel, S., Konsgen, D., Mustea, A., and Schweigert, F. J. (2005) Microheterogeneity of transthyretin in serum and ascitic fluid of ovarian cancer patients. BMC Cancer 17, 133-141.
    • (2005) BMC Cancer , vol.17 , pp. 133-141
    • Gericke, B.1    Raila, J.2    Sehouli, J.3    Haebel, S.4    Konsgen, D.5    Mustea, A.6    Schweigert, F.J.7
  • 16
  • 17
    • 20844436744 scopus 로고    scopus 로고
    • Comparative analysis of the tear protein expression in blepharitis patients using two-dimensional electrophoresis
    • Koo, B. S., Lee, D. Y., Ha, H. S., Kim, J. C., and Kim, C. W. (2005) Comparative analysis of the tear protein expression in blepharitis patients using two-dimensional electrophoresis. J. Proteome Res. 4, 719-724.
    • (2005) J. Proteome Res , vol.4 , pp. 719-724
    • Koo, B.S.1    Lee, D.Y.2    Ha, H.S.3    Kim, J.C.4    Kim, C.W.5
  • 19
    • 23844448398 scopus 로고    scopus 로고
    • Amado, F. M., Vitorino, R. M., Domingues, P. M., Lobo, M. J., and Duarte, J. A. (2005) Analysis of the human saliva proteome. Expert Rev. Proteomics 2, 521-539.
    • Amado, F. M., Vitorino, R. M., Domingues, P. M., Lobo, M. J., and Duarte, J. A. (2005) Analysis of the human saliva proteome. Expert Rev. Proteomics 2, 521-539.
  • 20
    • 23244443618 scopus 로고    scopus 로고
    • Rapid detection of fetal aneuploidy using proteomics approaches on amniotic fluid supernatant
    • Wang, T. H., Chang, Y. I., Peng, H. H., Wang, S. T., Lu, H. W., Teng, S. H., Chang, S. D., and Wang, H. S. (2005) Rapid detection of fetal aneuploidy using proteomics approaches on amniotic fluid supernatant. Prenat. Diagn. 25, 559-566.
    • (2005) Prenat. Diagn , vol.25 , pp. 559-566
    • Wang, T.H.1    Chang, Y.I.2    Peng, H.H.3    Wang, S.T.4    Lu, H.W.5    Teng, S.H.6    Chang, S.D.7    Wang, H.S.8
  • 21
    • 29144497972 scopus 로고    scopus 로고
    • Proteomic analysis using protein chips to detect biomarkers in cervical and amniotic fluid in women with intra-amniotic inflammation
    • Ruetschi, U., Rosen, A., Karlsson, G., Zetterberg, H., Rymo, L., Hagberg, H., and Jacobsson, B. (2005) Proteomic analysis using protein chips to detect biomarkers in cervical and amniotic fluid in women with intra-amniotic inflammation. J. Proteome Res. 4, 2236-2242.
    • (2005) J. Proteome Res , vol.4 , pp. 2236-2242
    • Ruetschi, U.1    Rosen, A.2    Karlsson, G.3    Zetterberg, H.4    Rymo, L.5    Hagberg, H.6    Jacobsson, B.7
  • 22
    • 33745086566 scopus 로고    scopus 로고
    • Proteomic analysis of recurrent spontaneous abortion: Identification of an inadequately expressed set of proteins in human follicular fluid
    • Kim, Y. S., Kim, M. S., Lee, S. H., Choi, B. C., Lim, J. M., Cha, K. Y., and Back, K. H. (2006) Proteomic analysis of recurrent spontaneous abortion: identification of an inadequately expressed set of proteins in human follicular fluid. Proteomics 6, 3445-3454.
    • (2006) Proteomics , vol.6 , pp. 3445-3454
    • Kim, Y.S.1    Kim, M.S.2    Lee, S.H.3    Choi, B.C.4    Lim, J.M.5    Cha, K.Y.6    Back, K.H.7
  • 23
    • 33745104040 scopus 로고    scopus 로고
    • Large-scale and high-confidence proteomic analysis of human seminal plasma
    • Pilch, B. and Mann, M. (2006) Large-scale and high-confidence proteomic analysis of human seminal plasma. Genome Biol. 7, R40
    • (2006) Genome Biol , vol.7
    • Pilch, B.1    Mann, M.2
  • 27
    • 23044450101 scopus 로고    scopus 로고
    • Proteomic study of human bronchoalveolar lavage fluids from smokers with chronic obstructive pulmonary disease by combining surface-enhanced laser desorption/ionization-mass spectrometry profiling with mass spectrometric protein identification
    • Merkel, D., Rist, W., Seither, P., Weith, A., and Lenter, M. C. (2005) Proteomic study of human bronchoalveolar lavage fluids from smokers with chronic obstructive pulmonary disease by combining surface-enhanced laser desorption/ionization-mass spectrometry profiling with mass spectrometric protein identification. Proteomics 5, 2972-2980.
    • (2005) Proteomics , vol.5 , pp. 2972-2980
    • Merkel, D.1    Rist, W.2    Seither, P.3    Weith, A.4    Lenter, M.C.5
  • 29
    • 23944498611 scopus 로고    scopus 로고
    • Proteomic profiling of human pleural effusion using two-dimensional nano liquid chromatography tandem mass spectrometry
    • Tyan, Y. C., Wu, H. Y., Lai, W. W., Su, W. C., and Liao, P. C. (2005) Proteomic profiling of human pleural effusion using two-dimensional nano liquid chromatography tandem mass spectrometry. J. Proteome Res. 4, 1274-1286.
    • (2005) J. Proteome Res , vol.4 , pp. 1274-1286
    • Tyan, Y.C.1    Wu, H.Y.2    Lai, W.W.3    Su, W.C.4    Liao, P.C.5
  • 30
    • 33845633819 scopus 로고    scopus 로고
    • Biomarker discovery: A proteomic approach for brain cancer profiling
    • Khalil, A. A. and James, P. (2007) Biomarker discovery: a proteomic approach for brain cancer profiling. Cancer Sei. 98, 201-213.
    • (2007) Cancer Sei , vol.98 , pp. 201-213
    • Khalil, A.A.1    James, P.2
  • 33
    • 33646927209 scopus 로고    scopus 로고
    • Proteome analysis of human hair shaft: From protein identification to post-translational modification
    • Lee, Y. J., Rice, R. H., and Lee, Y. M. (2006) Proteome analysis of human hair shaft: from protein identification to post-translational modification. Mol. Cell Proteomics 5, 789-800.
    • (2006) Mol. Cell Proteomics , vol.5 , pp. 789-800
    • Lee, Y.J.1    Rice, R.H.2    Lee, Y.M.3
  • 35
    • 20544455674 scopus 로고    scopus 로고
    • Lathrop, J. T., Hayes, T. K., Carrick, K., and Hammond, D. J. (2005) Rarity gives a charm: evaluation of trace proteins in plasma and serum. Expert Rev. Proteomics 2, 393-406.
    • Lathrop, J. T., Hayes, T. K., Carrick, K., and Hammond, D. J. (2005) Rarity gives a charm: evaluation of trace proteins in plasma and serum. Expert Rev. Proteomics 2, 393-406.
  • 36
    • 32044453084 scopus 로고    scopus 로고
    • Biomarker discovery from the plasma proteome using multidimensional fractionation proteomics
    • Lee, H. J., Lee, E. Y., Kwon, M. S., and Paik, Y. K. (2006) Biomarker discovery from the plasma proteome using multidimensional fractionation proteomics. Curr. Opin. Chem. Biol. 10, 42-49.
    • (2006) Curr. Opin. Chem. Biol , vol.10 , pp. 42-49
    • Lee, H.J.1    Lee, E.Y.2    Kwon, M.S.3    Paik, Y.K.4
  • 37
    • 0001644020 scopus 로고    scopus 로고
    • The human plasma proteome: History, character, and diagnostic prospects
    • Anderson, N. L. and Anderson, N. G. (2002) The human plasma proteome: history, character, and diagnostic prospects. Mol. Cell Proteomics 1, 845-867.
    • (2002) Mol. Cell Proteomics , vol.1 , pp. 845-867
    • Anderson, N.L.1    Anderson, N.G.2
  • 38
    • 33845572150 scopus 로고    scopus 로고
    • Human body fluid proteome analysis
    • Hu, S., Loo, J. A., and Wong, D. T. (2006) Human body fluid proteome analysis. Proteomics 6, 6326-6353.
    • (2006) Proteomics , vol.6 , pp. 6326-6353
    • Hu, S.1    Loo, J.A.2    Wong, D.T.3
  • 40
    • 28844442934 scopus 로고    scopus 로고
    • Prerequisites for peptidomic analysis of blood samples: I. Evaluation of blood specimen qualities and determination of technical performance characteristics
    • Tammen, H., Schutle, I., Hess, R., Menzel, C., Kellmann, M., and Schulz-Knappe, P. (2005) Prerequisites for peptidomic analysis of blood samples: I. Evaluation of blood specimen qualities and determination of technical performance characteristics. Comb. Chem. High Trhoughput Screen 8, 725-733.
    • (2005) Comb. Chem. High Trhoughput Screen , vol.8 , pp. 725-733
    • Tammen, H.1    Schutle, I.2    Hess, R.3    Menzel, C.4    Kellmann, M.5    Schulz-Knappe, P.6
  • 43
    • 28044444292 scopus 로고    scopus 로고
    • Preanalytical impact of sample handling on proteome profiling experiments with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    • Findeisen, P., Sismanidis, D., Riedl, M., Costina, V., and Neumaier, M. (2005) Preanalytical impact of sample handling on proteome profiling experiments with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Clin. Chem. 51, 2409-2411.
    • (2005) Clin. Chem , vol.51 , pp. 2409-2411
    • Findeisen, P.1    Sismanidis, D.2    Riedl, M.3    Costina, V.4    Neumaier, M.5
  • 44
    • 0036613984 scopus 로고    scopus 로고
    • Proteomic analysis and molecular characterization of tissue ferritin light chain in hepatocellular carcinoma
    • Park, K. S., Kim, H., Kim, N. G., Cho, S. Y., Choi, K. H., Seong, J. K., and Paik, Y. K. (2002) Proteomic analysis and molecular characterization of tissue ferritin light chain in hepatocellular carcinoma, Hepatology 35, 1459-1466.
    • (2002) Hepatology , vol.35 , pp. 1459-1466
    • Park, K.S.1    Kim, H.2    Kim, N.G.3    Cho, S.Y.4    Choi, K.H.5    Seong, J.K.6    Paik, Y.K.7
  • 45
    • 0037049991 scopus 로고    scopus 로고
    • Proteomic alterations of the variants of human aldehyde dehydrogenase isozymes correlate with hepatocellular carcinoma
    • Park, K. S., Cho, S. Y., Kim, H., and Paik, Y. K. (2002) Proteomic alterations of the variants of human aldehyde dehydrogenase isozymes correlate with hepatocellular carcinoma. Int. J. Cancer 97, 261-265.
    • (2002) Int. J. Cancer , vol.97 , pp. 261-265
    • Park, K.S.1    Cho, S.Y.2    Kim, H.3    Paik, Y.K.4
  • 46
    • 0345873242 scopus 로고    scopus 로고
    • Targeting hepatocytes from liver tissue by laser capture microdissection and proteomics expression profiling
    • Marko-Varga, G., Berglund, M., Malmstrom, J., Lindberg, H., and Fehniger, T. E. (2003) Targeting hepatocytes from liver tissue by laser capture microdissection and proteomics expression profiling. Electrophoresis 24, 3800-3805.
    • (2003) Electrophoresis , vol.24 , pp. 3800-3805
    • Marko-Varga, G.1    Berglund, M.2    Malmstrom, J.3    Lindberg, H.4    Fehniger, T.E.5
  • 48
    • 33745624543 scopus 로고    scopus 로고
    • Label-free semiquantitative peptide feature profiling of human breast cancer and breast disease sera via two-dimensional liquid chromatography-mass spectrometry
    • Ru, Q. C., Zhu, L. A., Silberman, J., and Shriver, C. D. (2006) Label-free semiquantitative peptide feature profiling of human breast cancer and breast disease sera via two-dimensional liquid chromatography-mass spectrometry. Mol. Cell Proteomics 5, 1095-1104.
    • (2006) Mol. Cell Proteomics , vol.5 , pp. 1095-1104
    • Ru, Q.C.1    Zhu, L.A.2    Silberman, J.3    Shriver, C.D.4
  • 50
    • 0030992978 scopus 로고    scopus 로고
    • Biological and environmental specimen banking at the Centers for Disease Control and Prevention
    • Gunter, E. W. (1997) Biological and environmental specimen banking at the Centers for Disease Control and Prevention. Chemosphere 34, 1945-1953.
    • (1997) Chemosphere , vol.34 , pp. 1945-1953
    • Gunter, E.W.1
  • 51
    • 0025131768 scopus 로고
    • The development of the U.S. EPA health effects research laboratory frozen blood cell repository program
    • Strauss, G. H. and Kelly, S. J. (1990) The development of the U.S. EPA health effects research laboratory frozen blood cell repository program. Mutat. Res. 234, 349-354.
    • (1990) Mutat. Res , vol.234 , pp. 349-354
    • Strauss, G.H.1    Kelly, S.J.2
  • 52
    • 14344256012 scopus 로고    scopus 로고
    • Romeo, M. J., Espina, V., Lowenthal, M., Espina, B. H., Petricoin, E. F. 3rd, and Liotta, L. A. (2005) CSF proteome: a protein repository for potential biomarker identification. Expert Rev. Proteomics 2, 57-70.
    • Romeo, M. J., Espina, V., Lowenthal, M., Espina, B. H., Petricoin, E. F. 3rd, and Liotta, L. A. (2005) CSF proteome: a protein repository for potential biomarker identification. Expert Rev. Proteomics 2, 57-70.
  • 53
    • 27144443999 scopus 로고    scopus 로고
    • Conrads, T. P., Hood, B. L., Petricoin, E. F. 3rd, Liotta, L. A., and Veenstra, T. D. (2005) Cancer proteomics: many technologies, one goal. Expert Rev. Proteomics 2, 693-703.
    • Conrads, T. P., Hood, B. L., Petricoin, E. F. 3rd, Liotta, L. A., and Veenstra, T. D. (2005) Cancer proteomics: many technologies, one goal. Expert Rev. Proteomics 2, 693-703.
  • 54
    • 29244487150 scopus 로고    scopus 로고
    • The process chain for peptidomic biomarker discovery
    • Schrader, M. and Selle, H. (2006) The process chain for peptidomic biomarker discovery. Dis. Markers 22, 27-37.
    • (2006) Dis. Markers , vol.22 , pp. 27-37
    • Schrader, M.1    Selle, H.2
  • 55
    • 32044450268 scopus 로고    scopus 로고
    • Transcending the biomarker mindset: Deciphering disease mechanisms at the single cell level
    • Danna, E. A. and Nolan, G. P. (2006) Transcending the biomarker mindset: deciphering disease mechanisms at the single cell level. Curr. Opin. Chem. Biol., 10, 20-27.
    • (2006) Curr. Opin. Chem. Biol , vol.10 , pp. 20-27
    • Danna, E.A.1    Nolan, G.P.2
  • 56
    • 23044513606 scopus 로고    scopus 로고
    • Screening for hepatocellular carcinoma
    • De Masi, S., Tosti, M. E., and Mele, A. (2005) Screening for hepatocellular carcinoma. Dig. Liver Dis. 37, 260-268.
    • (2005) Dig. Liver Dis , vol.37 , pp. 260-268
    • De Masi, S.1    Tosti, M.E.2    Mele, A.3
  • 57
    • 3142686602 scopus 로고    scopus 로고
    • Urine diacetylspermine as a novel tumor marker for pancreatobiliary carcinomas
    • Yamaguchi, K., Nagano, M., Torada, N. Hamasaki, N., Kawakita, M., and Tanaka, M. (2004) Urine diacetylspermine as a novel tumor marker for pancreatobiliary carcinomas. Rinsho. Byori. 52, 336-339
    • (2004) Rinsho. Byori , vol.52 , pp. 336-339
    • Yamaguchi, K.1    Nagano, M.2    Torada, N.3    Hamasaki, N.4    Kawakita, M.5    Tanaka, M.6
  • 58
  • 59
    • 0028801975 scopus 로고
    • A prospective evaluation of plasma prostate-specific antigen for detection of prostatic cancer
    • Gann, P. H., Hennekens, C. H., and Stampfer, M. J. (1995) A prospective evaluation of plasma prostate-specific antigen for detection of prostatic cancer. JAMA 273, 289-294
    • (1995) JAMA , vol.273 , pp. 289-294
    • Gann, P.H.1    Hennekens, C.H.2    Stampfer, M.J.3
  • 60
    • 0027289176 scopus 로고
    • Determination of CA 15-3 in the control of primary and metastatic breast carcinoma
    • Ciambellotti, E., Coda, C., and Lanza, E. (1993) Determination of CA 15-3 in the control of primary and metastatic breast carcinoma. Minerva Med. 84, 107-112.
    • (1993) Minerva Med , vol.84 , pp. 107-112
    • Ciambellotti, E.1    Coda, C.2    Lanza, E.3
  • 62
    • 33750605893 scopus 로고    scopus 로고
    • Tumor-associated antigen arrays for the serological diagnosis of cancer
    • Casiano, C. A., Mediavilla-Varela, M., and Tan, E. M. (2006) Tumor-associated antigen arrays for the serological diagnosis of cancer. Mol. Cell Proteomics 5, 1745-1759.
    • (2006) Mol. Cell Proteomics , vol.5 , pp. 1745-1759
    • Casiano, C.A.1    Mediavilla-Varela, M.2    Tan, E.M.3
  • 63
    • 33646476196 scopus 로고    scopus 로고
    • Hcc-2, a novel mammalian ER thioredoxin that is differentially expressed in hepatocellular carcinoma
    • Nissom, P. M., Lo, S. L., Lo, J. C., Ong, P. F., Lim, J. W., Ou, K., Liang, R. C., Seow, T. K., and Chung, M. C. (2006) Hcc-2, a novel mammalian ER thioredoxin that is differentially expressed in hepatocellular carcinoma. FEBS Lett. 580, 2216-2226.
    • (2006) FEBS Lett , vol.580 , pp. 2216-2226
    • Nissom, P.M.1    Lo, S.L.2    Lo, J.C.3    Ong, P.F.4    Lim, J.W.5    Ou, K.6    Liang, R.C.7    Seow, T.K.8    Chung, M.C.9
  • 64
    • 28444451204 scopus 로고    scopus 로고
    • Heat-shock protein 27: A potential biomarker for hepatocellular carcinoma identified by serum proteome analysis
    • Feng, J. T., Liu, Y. K., Song, H. Y., Dai, Z., Qin, L. X., Almofti, M. R., Fang, C. Y., Lu, H. J., Yang, P. Y., and Tang, Z. Y. (2005) Heat-shock protein 27: a potential biomarker for hepatocellular carcinoma identified by serum proteome analysis. Proteomics 5, 4581-1588.
    • (2005) Proteomics , vol.5 , pp. 4581-1588
    • Feng, J.T.1    Liu, Y.K.2    Song, H.Y.3    Dai, Z.4    Qin, L.X.5    Almofti, M.R.6    Fang, C.Y.7    Lu, H.J.8    Yang, P.Y.9    Tang, Z.Y.10
  • 65
    • 33745090846 scopus 로고    scopus 로고
    • Identification of breast cancer metastasis-associated proteins in an isogenic tumor metastasis model using two-dimensional gel electrophoresis and liquid chromatography-ion trap-mass spectrometry
    • Li, D. Q., Wang, L., Fei, F., Hou, Y. F., Luo, J. M., Wei-Chen, Zeng, R., Wu, J., Lu, J. S., Di, G. H., Ou, Z. L., Xia, Q. C., Shen, Z. Z., and Shao, Z. M. (2006) Identification of breast cancer metastasis-associated proteins in an isogenic tumor metastasis model using two-dimensional gel electrophoresis and liquid chromatography-ion trap-mass spectrometry. Proteomics 6, 3352-3368.
    • (2006) Proteomics , vol.6 , pp. 3352-3368
    • Li, D.Q.1    Wang, L.2    Fei, F.3    Hou, Y.F.4    Luo, J.M.5    Chen, W.6    Zeng, R.7    Wu, J.8    Lu, J.S.9    Di, G.H.10    Ou, Z.L.11    Xia, Q.C.12    Shen, Z.Z.13    Shao, Z.M.14
  • 66
    • 29144525537 scopus 로고    scopus 로고
    • Identification of human hepatocellular carcinomarelated biomarkers by two-dimensional difference gel electrophoresis and mass spectrometry
    • Lee, I. N., Chen, C. H., Sheu, J. C., Lee, H. S., Huang, G. T., Yu, C. Y., Lu, F. J., and Chow, L. P. (2005) Identification of human hepatocellular carcinomarelated biomarkers by two-dimensional difference gel electrophoresis and mass spectrometry. J. Proteome Res. 4, 2062-2069.
    • (2005) J. Proteome Res , vol.4 , pp. 2062-2069
    • Lee, I.N.1    Chen, C.H.2    Sheu, J.C.3    Lee, H.S.4    Huang, G.T.5    Yu, C.Y.6    Lu, F.J.7    Chow, L.P.8
  • 68
    • 9244246248 scopus 로고    scopus 로고
    • The differential proteome profile of stomach cancer: Identification of the biomarker candidates
    • Jang, J. S., Cho, H. Y., Lee, Y. J., Ha, W. S., and Kim, H. W. (2004) The differential proteome profile of stomach cancer: identification of the biomarker candidates. Oncol. Res. 14, 491-499.
    • (2004) Oncol. Res , vol.14 , pp. 491-499
    • Jang, J.S.1    Cho, H.Y.2    Lee, Y.J.3    Ha, W.S.4    Kim, H.W.5
  • 69
    • 0038555469 scopus 로고    scopus 로고
    • A strategy for the comparative analysis of serum proteomes for the discovery of biomarkers for hepatocellular carcinoma
    • Steel, L. F., Shumpert, D., Trotter, M., Seeholzer, S. H., Evans, A. A., London, W. T., Dwek, R., and Block, T. M. (2003) A strategy for the comparative analysis of serum proteomes for the discovery of biomarkers for hepatocellular carcinoma. Proteomics 3, 601-609.
    • (2003) Proteomics , vol.3 , pp. 601-609
    • Steel, L.F.1    Shumpert, D.2    Trotter, M.3    Seeholzer, S.H.4    Evans, A.A.5    London, W.T.6    Dwek, R.7    Block, T.M.8
  • 70
    • 19944422707 scopus 로고    scopus 로고
    • Yip, T. T., Chan, J. W., Cho, W. C., Yip, T. T., Wang, Z., Kwan, T. L., Law, S. C., Tsang, D. N., Chan, J. K., Lee, K. C., Cheng, W. W., Ma, V. W., Yip, C., Lim, C. K., Ngan, R. K., Au, J. S., Chan, A., Lim, W. W., and Ciphergen SARS Proteomics Study Group (2005) Protein chip array profiling analysis in patients with severe acute respiratory syndrome identified serum, amyloid a protein as a biomarker potentially useful in monitoring the extent of pneumonia. Clin. Chem. 51, 47-55.
    • Yip, T. T., Chan, J. W., Cho, W. C., Yip, T. T., Wang, Z., Kwan, T. L., Law, S. C., Tsang, D. N., Chan, J. K., Lee, K. C., Cheng, W. W., Ma, V. W., Yip, C., Lim, C. K., Ngan, R. K., Au, J. S., Chan, A., Lim, W. W., and Ciphergen SARS Proteomics Study Group (2005) Protein chip array profiling analysis in patients with severe acute respiratory syndrome identified serum, amyloid a protein as a biomarker potentially useful in monitoring the extent of pneumonia. Clin. Chem. 51, 47-55.
  • 71
    • 33645721632 scopus 로고    scopus 로고
    • Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins
    • Anderson, L. and Hunter, C. L. (2005) Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins. Mol. Cell Proteomics 5, 573-588.
    • (2005) Mol. Cell Proteomics , vol.5 , pp. 573-588
    • Anderson, L.1    Hunter, C.L.2
  • 72
    • 33845205234 scopus 로고    scopus 로고
    • Biomarker assay translation from, discovery to clinical studies in cancer drug development: Quantification of emerging protein biomarkers
    • Lee, J. W., Figeys, D., and Vasilescu, J. (2007) Biomarker assay translation from, discovery to clinical studies in cancer drug development: quantification of emerging protein biomarkers. Adv. Cancer Res. 96, 269-298.
    • (2007) Adv. Cancer Res , vol.96 , pp. 269-298
    • Lee, J.W.1    Figeys, D.2    Vasilescu, J.3
  • 73
    • 33750634123 scopus 로고    scopus 로고
    • The proteomic search for diagnostic biomarkers: Lost in translation?
    • Zolg, W. (2006) The proteomic search for diagnostic biomarkers: lost in translation? Mol, Cell Proteomics 5, 1720-1726.
    • (2006) Mol, Cell Proteomics , vol.5 , pp. 1720-1726
    • Zolg, W.1
  • 74
    • 19544367642 scopus 로고    scopus 로고
    • A novel approach for clustering proteomics data using Bayesian fast Fourier transform
    • Bensmail, H., Golek, J., Moody, M. M., Semmes, J. O., and Haoudi, A. (2005) A novel approach for clustering proteomics data using Bayesian fast Fourier transform. Bioinformatics 21, 2210-2224.
    • (2005) Bioinformatics , vol.21 , pp. 2210-2224
    • Bensmail, H.1    Golek, J.2    Moody, M.M.3    Semmes, J.O.4    Haoudi, A.5
  • 76
    • 25444526097 scopus 로고    scopus 로고
    • Are scale-free networks robust to measurement errors?
    • Lin, N. and Zhao, H. (2005) Are scale-free networks robust to measurement errors? BMC Bioinformatics 6, 119.
    • (2005) BMC Bioinformatics , vol.6 , pp. 119
    • Lin, N.1    Zhao, H.2
  • 79
    • 27744583045 scopus 로고    scopus 로고
    • Lilley, K. S. and Friedman, D. B. (2004) All about DIGE: quantification technology for differential-display 2D-gel proteomics. Expert Rev. Proteomics 1, 401-409.
    • Lilley, K. S. and Friedman, D. B. (2004) All about DIGE: quantification technology for differential-display 2D-gel proteomics. Expert Rev. Proteomics 1, 401-409.
  • 80
    • 33750728385 scopus 로고    scopus 로고
    • Advances and challenges in liquid chromatography-mass spectrometry-based proteomics profiling for clinical applications
    • Qian, W. J., Jacobs, J. M., Liu, T., Camp, D. G. 2nd, and Smith, R. D. (2006) Advances and challenges in liquid chromatography-mass spectrometry-based proteomics profiling for clinical applications. Mol., Cell Proteomics 5, 1727-1744.
    • (2006) Mol., Cell Proteomics , vol.5 , pp. 1727-1744
    • Qian, W.J.1    Jacobs, J.M.2    Liu, T.3    Camp 2nd, D.G.4    Smith, R.D.5
  • 81
    • 33745554756 scopus 로고    scopus 로고
    • Powell, D. W., Merchant, M. L., and Link, A. J. (2006) Discovery of regulatory molecular events and biomarkers using 2D capillary chromatography and mass spectrometry. Expert Rev. Proteomics 3, 63-74.
    • Powell, D. W., Merchant, M. L., and Link, A. J. (2006) Discovery of regulatory molecular events and biomarkers using 2D capillary chromatography and mass spectrometry. Expert Rev. Proteomics 3, 63-74.
  • 83
    • 18844447205 scopus 로고    scopus 로고
    • Saturation labeling with cysteine-reactive cyanine fluorescent dyes provides increased sensitivity for protein expression profiling of laser-microdissected clinical specimens
    • Greengauz-Roberts, O., Stoppler, H., Nomura, S., Yamaguchi, H., Goldenring, J. R., Podolsky, R. H., Lee, J. R., and Dynan, W. S. (2005) Saturation labeling with cysteine-reactive cyanine fluorescent dyes provides increased sensitivity for protein expression profiling of laser-microdissected clinical specimens. Proteomics 5, 1746-1757.
    • (2005) Proteomics , vol.5 , pp. 1746-1757
    • Greengauz-Roberts, O.1    Stoppler, H.2    Nomura, S.3    Yamaguchi, H.4    Goldenring, J.R.5    Podolsky, R.H.6    Lee, J.R.7    Dynan, W.S.8
  • 84
    • 20444508181 scopus 로고    scopus 로고
    • Heck, A. J. and Krijgsveld, J. (2004) Mass spectrometry-based quantitative proteomics. Expert Rev. Proteomics 1, 317-326.
    • Heck, A. J. and Krijgsveld, J. (2004) Mass spectrometry-based quantitative proteomics. Expert Rev. Proteomics 1, 317-326.
  • 85
    • 14644417774 scopus 로고    scopus 로고
    • Schneider, L. V. and Hall, M. P. (2005) Stable isotope methods for high-precision proteomics. Drug Discov. Today 1.0, 353-363.
    • Schneider, L. V. and Hall, M. P. (2005) Stable isotope methods for high-precision proteomics. Drug Discov. Today 1.0, 353-363.
  • 87
    • 4544282394 scopus 로고    scopus 로고
    • High-throughput comparative proteome analysis using a quantitative cysteinyl-peptide enrichment technology
    • Liu, T., Qian, W. J., Strittmatter, E. F., Camp, D. G. 2nd, Anderson, G. A., Thrall. B. D., and Smith, R. D. (2004) High-throughput comparative proteome analysis using a quantitative cysteinyl-peptide enrichment technology. Anal. Chem. 76, 5345-5353.
    • (2004) Anal. Chem , vol.76 , pp. 5345-5353
    • Liu, T.1    Qian, W.J.2    Strittmatter, E.F.3    Camp 2nd, D.G.4    Anderson, G.A.5    Thrall, B.D.6    Smith, R.D.7
  • 88
    • 2542564256 scopus 로고    scopus 로고
    • Accurate qualitative and quantitative proteomic analysis of clinical hepatocellular carcinoma using laser capture microdissection coupled with isotope-coded affinity tag and two-dimensional liquid chromatography mass spectrometry
    • Li, C., Hong, Y., Tan, Y. X., Zhou, H., Ai, J. H., Li, S. J., Zhang, L., Xia, Q. C., Wu, J. R., Wang, H. Y., and Zeng, R. (2004) Accurate qualitative and quantitative proteomic analysis of clinical hepatocellular carcinoma using laser capture microdissection coupled with isotope-coded affinity tag and two-dimensional liquid chromatography mass spectrometry. Mol. Cell Proteomics 3, 399-409.
    • (2004) Mol. Cell Proteomics , vol.3 , pp. 399-409
    • Li, C.1    Hong, Y.2    Tan, Y.X.3    Zhou, H.4    Ai, J.H.5    Li, S.J.6    Zhang, L.7    Xia, Q.C.8    Wu, J.R.9    Wang, H.Y.10    Zeng, R.11
  • 92
    • 23944510681 scopus 로고    scopus 로고
    • Analysis of human proteome organization plasma proteome project (HUPO PPP) reference specimens using surface enhanced laser desorption/ionization-time of flight (SELDI-TOF) mass spectrometry: Multiinstitution correlation of spectra and identification of biomarkers
    • Rai, A. J., Stemmer, P. M., Zhang, Z., Adam, B. L., Morgan, W. T., Caffrey, R. E., Podust, V. N., Patel, M., Lim, L. Y., Shipulina, N. V., Chan, D. W., Semines, O. J., and Leung, H. C. (2005) Analysis of human proteome organization plasma proteome project (HUPO PPP) reference specimens using surface enhanced laser desorption/ionization-time of flight (SELDI-TOF) mass spectrometry: multiinstitution correlation of spectra and identification of biomarkers. Proteomics 5, 3467-3474.
    • (2005) Proteomics , vol.5 , pp. 3467-3474
    • Rai, A.J.1    Stemmer, P.M.2    Zhang, Z.3    Adam, B.L.4    Morgan, W.T.5    Caffrey, R.E.6    Podust, V.N.7    Patel, M.8    Lim, L.Y.9    Shipulina, N.V.10    Chan, D.W.11    Semines, O.J.12    Leung, H.C.13
  • 93
    • 33646259958 scopus 로고    scopus 로고
    • Clinical proteomics: Searching for better tumour markers with SELDI-TOF mass spectrometry
    • Engwegen, J. Y., Gast, M. C., Schellens, J. H., and. Beijnen, J. H. (2006) Clinical proteomics: searching for better tumour markers with SELDI-TOF mass spectrometry. Trends Pharmacol. Sci. 27, 251-259.
    • (2006) Trends Pharmacol. Sci , vol.27 , pp. 251-259
    • Engwegen, J.Y.1    Gast, M.C.2    Schellens, J.H.3    Beijnen, J.H.4
  • 94
    • 33645813378 scopus 로고    scopus 로고
    • Mass spectrometry and protein analysis
    • Domon, B. and Aebersold, R. (2006) Mass spectrometry and protein analysis. Science 312, 212-217.
    • (2006) Science , vol.312 , pp. 212-217
    • Domon, B.1    Aebersold, R.2
  • 95
    • 33750622611 scopus 로고    scopus 로고
    • Challenges and opportunities in proteomics data analysis
    • Domon, B. and Aebersold, R. (2006) Challenges and opportunities in proteomics data analysis. Mol. Cell Proteomics 5, 1921-1926.
    • (2006) Mol. Cell Proteomics , vol.5 , pp. 1921-1926
    • Domon, B.1    Aebersold, R.2
  • 96
    • 17844396912 scopus 로고    scopus 로고
    • Antibody-based proteomics for human tissue profiling
    • Uhlen, M. and Ponten, F. (2005) Antibody-based proteomics for human tissue profiling. Mol. Cell Proteomics 4, 384-393.
    • (2005) Mol. Cell Proteomics , vol.4 , pp. 384-393
    • Uhlen, M.1    Ponten, F.2
  • 97
    • 33845921119 scopus 로고    scopus 로고
    • Taussig, M. J., Stoevesandt, O., Borrebaeck, C. A., Bradbury, A. R., Cahill, D., Cambillau, C., de Daruvar, A., Dubel, S., Eichler, J., Frank, R., Gibson, T. J., Gloriam, D., Gold, L., Herberg, F. W., Hermjakob, H., Hoheisel, J. D., Joos, T. O., Kallioniemi, O., Koegll, M., Konthur, Z., Korn, B., Kremmer, E., Krobitsch, S., Landegren, U., van der Maarel, S., McCafferty, J., Muyldermans, S., Nygren, P. A., Palcy, S., Pluckthun, A., Polic, B., Przybylski, M., Saviranta, P., Sawyer, A., Sherman, D. J., Skerra, A., Templin, M., Ueffing, M., and Uhlen, M. (2007) ProteomeBinders: planning a European resource of affinity reagents for analysis of the human proteome. Nat. Methods 4, 13-17.
    • Taussig, M. J., Stoevesandt, O., Borrebaeck, C. A., Bradbury, A. R., Cahill, D., Cambillau, C., de Daruvar, A., Dubel, S., Eichler, J., Frank, R., Gibson, T. J., Gloriam, D., Gold, L., Herberg, F. W., Hermjakob, H., Hoheisel, J. D., Joos, T. O., Kallioniemi, O., Koegll, M., Konthur, Z., Korn, B., Kremmer, E., Krobitsch, S., Landegren, U., van der Maarel, S., McCafferty, J., Muyldermans, S., Nygren, P. A., Palcy, S., Pluckthun, A., Polic, B., Przybylski, M., Saviranta, P., Sawyer, A., Sherman, D. J., Skerra, A., Templin, M., Ueffing, M., and Uhlen, M. (2007) ProteomeBinders: planning a European resource of affinity reagents for analysis of the human proteome. Nat. Methods 4, 13-17.
  • 98
    • 3342964033 scopus 로고    scopus 로고
    • Biomarker discovery and validation: Technologies and integrative approaches
    • Ilyin, S. E., Belkowski, S. M., and Plata-Salaman, C. R. (2004) Biomarker discovery and validation: technologies and integrative approaches. Trends Biotechnol. 22, 411-416.
    • (2004) Trends Biotechnol , vol.22 , pp. 411-416
    • Ilyin, S.E.1    Belkowski, S.M.2    Plata-Salaman, C.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.