Nucleolar trafficking of nucleostemin family proteins: Common versus protein-specific mechanisms

Molecular and Cellular Biology

Volumn 27, Issue 24, 2007, Pages 8670-8682

  Meng, Lingjun ^a   Zhu, Qubo ^a   Tsai, Robert Y L ^a  

^a UNIVERSITY OF TEXAS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GUANINE NUCLEOTIDE BINDING PROTEIN; GUANINE NUCLEOTIDE BINDING PROTEIN LIKE 3; NGP1 PROTEIN; NUCLEAR PROTEIN; NUCLEOSTEMIN; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; COILED BODY; CONTROLLED STUDY; HUMAN; HUMAN CELL; NONHUMAN; NUCLEOLUS; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN FAMILY; PROTEIN FUNCTION; PROTEIN LOCALIZATION; SEQUENCE HOMOLOGY; SIGNAL TRANSDUCTION;

AMINO ACID SEQUENCE; CELL LINE, TUMOR; CELL NUCLEOLUS; GTP-BINDING PROTEINS; HUMANS; MOLECULAR SEQUENCE DATA; MUTATION; PHYLOGENY; PROTEIN STRUCTURE, TERTIARY; PROTEIN TRANSPORT; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 37449029686     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.00635-07     Document Type: Article

References (45)

1. Andersen, J. S., Y. W. Lam, A. K. Leung, S. E. Ong, C. E. Lyon, A. I. Lamond, and M. Mann. 2005. Nucleolar proteome dynamics. Nature 433:77-83.
2. Bernardi, R., P. P. Scaglioni, S. Bergmann, H. F. Horn, K. H. Vousden, and P. P. Pandolfi. 2004. PML regulates p53 stability by sequestering Mdm2 to the nucleolus. Nat. Cell Biol. 6:665-672.
3. Catez, F., M. Erard, N. Schaerer-Uthurralt, K. Kindbeiter, J. J. Madjar, and J. J. Diaz. 2002. Unique motif for nucleolar retention and nuclear export regulated by phosphorylation. Mol. Cell. Biol. 22:1126-1139.
4. Chen, D., and S. Huang. 2001. Nucleolar components involved in ribosome biogenesis cycle between the nucleolus and nucleoplasm in interphase cells. J. Cell Biol. 153:169-176.
5. Daigle, D. M., L. Rossi, A. M. Berghuis, L. Aravind, E. V. Koonin, and E. D. Brown. 2002. YjeQ, an essential, conserved, uncharacterized protein from Escherichia coli, is an unusual GTPase with circularly permuted G-motifs and marked burst kinetics. Biochemistry 41:11109-11117.
6. Dundr, M., T. Misteli, and M. O. Olson. 2000. The dynamics of postmitotic reassembly of the nucleolus. J. Cell Biol. 150:433-446.
7. Fatica, A., and D. Tollervey. 2002. Making ribosomes. Curr. Opin. Cell Biol. 14:313-318.
8. Felsenstein, J. 1997. An alternating least squares approach to inferring phylogenies from pairwise distances. Syst. Biol. 46:101-111.
9. Fox, A. H., Y. W. Lam, A. K. Leung, C. E. Lyon, J. Andersen, M. Mann, and A. I. Lamond. 2002. Paraspeckles: a novel nuclear domain. Curr. Biol. 12:13-25.
10. Gorski, S. A., M. Dundr, and T. Misteli. 2006. The road much traveled: trafficking in the cell nucleus. Curr. Opin. Cell Biol. 18:284-290.
11. Grosshans, H., K. Deinert, E. Hurt, and G. Simos. 2001. Biogenesis of the signal recognition particle (SRP) involves import of SRP proteins into the nucleolus, assembly with the SRP-RNA, and Xpo1p-mediated export. J. Cell Biol. 153:745-762.
12. Huang, C. F., and N. N. Chuang. 2000. Disrupting the geranylgeranylation at the C-termini of the shrimp Ras by depriving guanine nucleotide binding at the N-terminal. J. Exp. Zool. 286:441-449.
13. Iismaa, S. E., L. Chung, M. J. Wu, D. C. Teller, V. C. Yee, and R. M. Graham. 1997. The core domain of the tissue transglutaminase Gh hydrolyzes GTP and ATP. Biochemistry 36:11655-11664.
14. Isogai, Y., and R. Tjian. 2003. Targeting genes and transcription factors to segregated nuclear compartments. Curr. Opin. Cell Biol. 15:296-303.
15. Jacobson, M. R., and T. Pederson. 1998. Localization of signal recognition particle RNA in the nucleolus of mammalian cells. Proc. Natl. Acad. Sci. USA 95:7981-7986.
16. Leipe, D. D., Y. I. Wolf, E. V. Koonin, and L. Aravind. 2002. Classification and evolution of P-loop GTPases and related ATPases. J. Mol. Biol. 317:41-72.
17. Martel, C., P. Macchi, L. Furie, M. A. Kiebler, and L. Desgroseillers. 2006. Staufen1 is imported into the nucleolus via a bipartite nuclear localization signal and several modulatory determinants. Biochem. J. 393:245-254.
18. Mekhail, K., L. Gunaratnam, M. E. Bonicalzi, and S. Lee. 2004. HIF activation by pH-dependent nucleolar sequestration of VHL. Nat. Cell Biol. 6:642-647.
19. Mekhail, K., M. Khacho, A. Carrigan, R. R. Hache, L. Gunaratnam, and S. Lee. 2005. Regulation of ubiquitin ligase dynamics by the nucleolus. J. Cell Biol. 170:733-744.
20. Meng, L., H. Yasumoto, and R. Y. Tsai. 2006. Multiple controls regulate nucleostemin partitioning between nucleolus and nucleoplasm. J. Cell Sci. 119:5124-5136.
21. Misteli, T. 2005. Going in GTP cycles in the nucleolus. J. Cell Biol. 168:177-178.
22. Misteli, T. 2001. Protein dynamics: implications for nuclear architecture and gene expression. Science 291:843-847.
23. Misteli, T. 2004. Spatial positioning: a new dimension in genome function. Cell 119:153-156.
24. Negi, S. S., and M. O. Olson. 2006. Effects of interphase and mitotic phosphorylation on the mobility and location of nucleolar protein B23. J. Cell Sci. 119:3676-3685.
25. Olson, M. O., and M. Dundr. 2005. The moving parts of the nucleolus. Histochem. Cell Biol. 123:203-216.
26. Pederson, T. 1998. The plurifunctional nucleolus. Nucleic Acids Res. 26:3871-3876.
27. Phair, R. D., and T. Misteli. 2000. High mobility of proteins in the mammalian cell nucleus. Nature 404:604-609.
28. Racevskis, J., A. Dill, R. Stockert, and S. A. Fineberg. 1996. Cloning of a novel nucleolar guanosine 5′-triphosphate binding protein autoantigen from a breast tumor. Cell Growth Differ. 7:271-280.
29. Rao, M. R., G. Kumari, D. Balasundaram, R. Sankaranarayanan, and S. Mahalingam. 2006. A novel lysine-rich domain and GTP binding motifs regulate the nucleolar retention of human guanine nucleotide binding protein, GNL3L. J. Mol. Biol. 364:637-654.
30. Raska, I, P. J. Shaw, and D. Cmarko. 2006. Structure and function of the nucleolus in the spotlight. Curr. Opin. Cell Biol. 18:325-334.
31. Reed, M. L., B. K. Dove, R. M. Jackson, R. Collins, G. Brooks, and J. A. Hiscox. 2006. Delincation and modelling of a nucleolar retention signal in the Coronavirus nucleocapsid protein. Traffic 7:833-848.
32. Reynaud, E. G., M. A. Andrade, F. Bonneau, T. B. Ly, M. Knop, K. Scheffzek, and R. Pepperkok. 2005. Human Lsg1 defines a family of essential GTPases that correlates with the evolution of compartmentalization. BMC Biol. 3:21.
33. Rubbi, C. P., and J. Milner. 2000. Non-activated p53 co-localizes with sites of transcription within both the nucleoplasm and the nucleolus. Oncogene 19:85-96.
34. Sheng, Z., J. A. Lewis, and W. J. Chirico. 2004. Nuclear and nucleolar localization of 18-kDa fibroblast growth factor-2 is controlled by C-terminal signals. J. Biol. Chem. 279:40153-40160.
35. Sleeman, J. E., L. Trinkle-Mulcahy, A. R. Prescott, S. C. Ogg, and A. I. Lamond. 2003. Cajal body proteins SMN and Coilin show differential dynamic behaviour in vivo. J. Cell Sci. 116:2039-2050.
36. Sommerville, J., C. L. Brumwell, J. C. Politz, and T. Pederson. 2005. Signal recognition particle assembly in relation to the function of amplified nucleoli of Xenopus oocytes. J. Cell Sci. 118:1299-1307.
37. Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
38. Tsai, R. Y., and R. D. McKay. 2005. A multistep, GTP-driven mechanism controlling the dynamic cycling of nucleostemin. J. Cell Biol. 168:179-184.
39. Tsai, R. Y., and R. D. McKay. 2002. A nucleolar mechanism controlling cell proliferation in stem cells and cancer cells. Genes Dev. 16:2991-3003.
40. Tschochner, H., and E. Hurt. 2003. Pre-ribosomes on the road from the nucleolus to the cytoplasm. Trends Cell Biol. 13:255-263.
41. Weber, J. D., M. L. Kuo, B. Bothner, E. L. DiGiammarino, R. W. Kriwacki, M. F. Roussel, and C. J. Sherr. 2000. Cooperative signals governing ARF-Mdm2 interaction and nucleolar localization of the complex. Mol. Cell. Biol. 20:2517-2528.
42. Weber, J. D., L. J. Taylor, M. F. Roussel, C. J. Sherr, and D. Bar-Sagi. 1999. Nucleolar Arf sequesters Mdm2 and activates p53. Nat. Cell Biol. 1:20-26.
43. Wong, J. M., L. Kusdra, and K. Collins. 2002. Subnuclear shuttling of human telomerase induced by transformation and DNA damage. Nat. Cell Biol. 4:731-736.
44. Yasumoto, H., L. Meng, T. Lin, Q. Zhu, and R. Y. Tsai. 2007. GNL3L inhibits activity of estrogen-related receptor γ by competing for coactivator binding. J. Cell Sci. 120:2532-2543.
45. You, J., B. K. Dove, L. Enjuanes, M. L. DeDiego, E. Alvarez, G. Howell, P. Heinen, M. Zambon, and J. A. Hiscox. 2005. Subcellular localization of the severe acute respiratory syndrome Coronavirus nucleocapsid protein. J. Gen. Virol. 86:3303-3310.