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Volumn 66, Issue 4, 2007, Pages 1029-1038

Crystal structure of the Leishmania major phosphodiesterase LmjPDEB1 and insight into the design of the parasite-selective inhibitors

Author keywords

[No Author keywords available]

Indexed keywords

1 (3 CHLOROANILINO) 4 PHENYLPHTHALAZINE; 2 METHYL 5 NITROBENZENESULFONIC ACID DIMETHYLAMIDE; 4 (3 BUTOXY 4 METHOXYBENZYL) 2 IMIDAZOLIDINONE; 4 [8 (3 NITROPHENYL)[1,7]NAPHTHYRIDIN 6 YL]BENZOIC ACID; 4 [[3,4 (METHYLENEDIOXY)BENZYL]AMINO] 6 CHLOROQUINAZOLINE; 9 (2 HYDROXY 3 NONYL)ADENINE; ANTILEISHMANIAL AGENT; BAY 60 7550; DIPYRIDAMOLE; ETAZOLATE; GENISTEIN; GLUTAMINE; HESPERETIN; ISOBUTYLMETHYLXANTHINE; L 869298; LUTEOLIN; MK 298; NAPHTHYRIDINE DERIVATIVE; PHENYLALANINE; PHOSPHODIESTERASE; PHOSPHODIESTERASE B1; PHOSPHODIESTERASE INHIBITOR; PROTOZOAL PROTEIN; QUERCETIN; QUINAZOLINE DERIVATIVE; ROLIPRAM; SILDENAFIL; UNCLASSIFIED DRUG; ZAPRINAST; ZARDAVERINE;

EID: 35748936134     PISSN: 0950382X     EISSN: 13652958     Source Type: Journal    
DOI: 10.1111/j.1365-2958.2007.05976.x     Document Type: Article
Times cited : (57)

References (41)
  • 1
    • 33847219040 scopus 로고    scopus 로고
    • Molecular mechanisms of antimony resistance in Leishmania
    • Ashutosh, S.S. Goyal, N. (2007) Molecular mechanisms of antimony resistance in Leishmania. J Med Microbiol 56 : 143 153.
    • (2007) J Med Microbiol , vol.56 , pp. 143-153
    • Ashutosh, S.S.1    Goyal, N.2
  • 2
    • 33748686575 scopus 로고    scopus 로고
    • Cyclic nucleotide phosphodiesterases: Molecular regulation to clinical use
    • Bender, A.T. Beavo, J.A. (2006) Cyclic nucleotide phosphodiesterases: molecular regulation to clinical use. Pharmacol Rev 58 : 488 520.
    • (2006) Pharmacol Rev , vol.58 , pp. 488-520
    • Bender, A.T.1    Beavo, J.A.2
  • 3
    • 33745755921 scopus 로고    scopus 로고
    • Improving memory: A role for phosphodiesterases
    • Blokland, A., Schreiber, R. Prickaerts, J. (2006) Improving memory: a role for phosphodiesterases. Curr Pharm Des 12 : 2511 2523.
    • (2006) Curr Pharm des , vol.12 , pp. 2511-2523
    • Blokland, A.1    Schreiber, R.2    Prickaerts, J.3
  • 4
    • 3543012707 scopus 로고    scopus 로고
    • Crystallography and NMR system: A new software suite for macromolecular structure determination
    • Brünger, A.T., Adams, P.D., Clore, G.M., DeLano, W.L., Gros, P., Grosse-Kunstleve, R.W., et al. (1998) Crystallography and NMR system: a new software suite for macromolecular structure determination. Acta Cryst D54 : 905 921.
    • (1998) Acta Cryst , vol.54 , pp. 905-921
    • Brünger, A.T.1    Adams, P.D.2    Clore, G.M.3    Delano, W.L.4    Gros, P.5    Grosse-Kunstleve, R.W.6
  • 5
    • 14544272401 scopus 로고    scopus 로고
    • Cyclic nucleotide phosphodiesterases and their role in immunomodulatory responses: Advances in the development of specific phosphodiesterase inhibitors
    • Castro, A., Jerez, M.J., Gil, C. Martinez, A. (2005) Cyclic nucleotide phosphodiesterases and their role in immunomodulatory responses: advances in the development of specific phosphodiesterase inhibitors. Med Res Rev 25 : 229 244.
    • (2005) Med Res Rev , vol.25 , pp. 229-244
    • Castro, A.1    Jerez, M.J.2    Gil, C.3    Martinez, A.4
  • 6
    • 34447265905 scopus 로고    scopus 로고
    • Biochemistry and physiology of cyclic nucleotide phosphodiesterases: Essential components in cyclic nucleotide signaling
    • Conti, M. Beavo, J. (2007) Biochemistry and physiology of cyclic nucleotide phosphodiesterases: essential components in cyclic nucleotide signaling. Ann Rev Biochem 76 : 481 511.
    • (2007) Ann Rev Biochem , vol.76 , pp. 481-511
    • Conti, M.1    Beavo, J.2
  • 7
    • 33745196673 scopus 로고    scopus 로고
    • Current scenario of drug development for leishmaniasis
    • Croft, S.L., Seifert, K. Yardley, V. (2006) Current scenario of drug development for leishmaniasis. Indian J Med Res 123 : 399 410.
    • (2006) Indian J Med Res , vol.123 , pp. 399-410
    • Croft, S.L.1    Seifert, K.2    Yardley, V.3
  • 8
    • 0345659212 scopus 로고    scopus 로고
    • Leishmania/HIV co-infections: Epidemiology in Europe
    • Desjeux, P. Alvar, J. (2003) Leishmania/HIV co-infections: epidemiology in Europe. Ann Trop Med Parasitol 97 : S3 S15.
    • (2003) Ann Trop Med Parasitol , vol.97
    • Desjeux, P.1    Alvar, J.2
  • 10
    • 27344449614 scopus 로고    scopus 로고
    • Keynote review: Phosphodiesterase-4 as a therapeutic target
    • Houslay, M.D., Schafer, P. Zhang, K.Y. (2005) Keynote review: phosphodiesterase-4 as a therapeutic target. Drug Discov Today 10 : 1503 1519.
    • (2005) Drug Discov Today , vol.10 , pp. 1503-1519
    • Houslay, M.D.1    Schafer, P.2    Zhang, K.Y.3
  • 11
    • 1842581748 scopus 로고    scopus 로고
    • Crystal structures of phosphodiesterases 4 and 5 in complex with inhibitor IBMX suggest a conformation determinant of inhibitor selectivity
    • Huai, Q., Liu, Y., Francis, S.H., Corbin, J.D. Ke, H. (2004a) Crystal structures of phosphodiesterases 4 and 5 in complex with inhibitor IBMX suggest a conformation determinant of inhibitor selectivity. J Biol Chem 279 : 13095 13101.
    • (2004) J Biol Chem , vol.279 , pp. 13095-13101
    • Huai, Q.1    Liu, Y.2    Francis, S.H.3    Corbin, J.D.4    Ke, H.5
  • 12
    • 3042795876 scopus 로고    scopus 로고
    • Crystal structure of phosphodiesterase 9 shows orientation variation of inhibitor 3-isobutyl-1-methylxanthine binding
    • Huai, Q., Wang, H., Zhang, W., Colman, R., Robinson, H. Ke, H. (2004b) Crystal structure of phosphodiesterase 9 shows orientation variation of inhibitor 3-isobutyl-1-methylxanthine binding. Proc Natl Acad Sci USA 101 : 9624 9629.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 9624-9629
    • Huai, Q.1    Wang, H.2    Zhang, W.3    Colman, R.4    Robinson, H.5    Ke, H.6
  • 13
    • 20444363484 scopus 로고    scopus 로고
    • Structural determinants for inhibitor specificity and selectivity in PDE2A using the wheat germ in vitro translation system
    • Iffland, A., Kohls, D., Low, S., Luan, J., Zhang, Y., Kothe, M., et al. (2005) Structural determinants for inhibitor specificity and selectivity in PDE2A using the wheat germ in vitro translation system. Biochemistry 44 : 8312 8325.
    • (2005) Biochemistry , vol.44 , pp. 8312-8325
    • Iffland, A.1    Kohls, D.2    Low, S.3    Luan, J.4    Zhang, Y.5    Kothe, M.6
  • 14
    • 33645558859 scopus 로고    scopus 로고
    • Cyclic nucleotide specific phosphodiesterases of Leishmania major
    • Johner, A., Kunz, S., Linder, M., Shakur, Y. Seebeck, T. (2006) Cyclic nucleotide specific phosphodiesterases of Leishmania major. BMC Microbiol 6 : 25.
    • (2006) BMC Microbiol , vol.6 , pp. 25
    • Johner, A.1    Kunz, S.2    Linder, M.3    Shakur, Y.4    Seebeck, T.5
  • 15
    • 84889120137 scopus 로고
    • Improved methods for building protein models in electron density maps and the location of errors in these models
    • Jones, T.A., Zou, J.-Y., Cowan, S.W. Kjeldgaard, M. (1991) Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Cryst A47 : 110 119.
    • (1991) Acta Cryst , vol.47 , pp. 110-119
    • Jones, T.A.1    Zou, J.-Y.2    Cowan, S.W.3    Kjeldgaard, M.4
  • 16
    • 33746825106 scopus 로고    scopus 로고
    • Phlebotomine sand flies and Leishmania parasites: Friends or foes?
    • Kamhawi, S. (2006) Phlebotomine sand flies and Leishmania parasites: friends or foes? Trends Parasitol 22 : 439 445.
    • (2006) Trends Parasitol , vol.22 , pp. 439-445
    • Kamhawi, S.1
  • 17
    • 33847689816 scopus 로고    scopus 로고
    • Crystal structures of phosphodiesterases and implications on substrate specificity and inhibitor selectivity
    • Ke, H. Wang, H. (2007) Crystal structures of phosphodiesterases and implications on substrate specificity and inhibitor selectivity. Curr Top Med Chem 7 : 391 403.
    • (2007) Curr Top Med Chem , vol.7 , pp. 391-403
    • Ke, H.1    Wang, H.2
  • 18
    • 33846847777 scopus 로고    scopus 로고
    • Leishmania vaccines: Progress and problems
    • Kedzierski, L., Zhu, Y. Handman, E. (2006) Leishmania vaccines: progress and problems. Parasitology 133 : S87 S112.
    • (2006) Parasitology , vol.133
    • Kedzierski, L.1    Zhu, Y.2    Handman, E.3
  • 19
    • 28044466700 scopus 로고    scopus 로고
    • Cyclic nucleotide specific phosphodiesterases of the kinetoplastida: A unified nomenclature
    • Kunz, S., Beavo, J.A., D'Angelo, M.A., Flawia, M.M., Francis, S.H., Johner, A., et al. (2005) Cyclic nucleotide specific phosphodiesterases of the kinetoplastida: a unified nomenclature. Mol Biochem Parasitol 145 : 133 135.
    • (2005) Mol Biochem Parasitol , vol.145 , pp. 133-135
    • Kunz, S.1    Beavo, J.A.2    D'Angelo, M.A.3    Flawia, M.M.4    Francis, S.H.5    Johner, A.6
  • 20
    • 13544249975 scopus 로고    scopus 로고
    • Trypanosome cyclic nucleotide phosphodiesterase 2B binds cAMP through its GAF-A domain
    • Laxman, S., Rascon, A. Beavo, J.A. (2005) Trypanosome cyclic nucleotide phosphodiesterase 2B binds cAMP through its GAF-A domain. J Biol Chem 280 : 3771 3779.
    • (2005) J Biol Chem , vol.280 , pp. 3771-3779
    • Laxman, S.1    Rascon, A.2    Beavo, J.A.3
  • 21
    • 30044446499 scopus 로고    scopus 로고
    • Cyclic nucleotide phosphodiesterases as targets for treatment of haematological malignancies
    • Lerner, A. Epstein, P.M. (2006) Cyclic nucleotide phosphodiesterases as targets for treatment of haematological malignancies. Biochem J 393 : 21 41.
    • (2006) Biochem J , vol.393 , pp. 21-41
    • Lerner, A.1    Epstein, P.M.2
  • 22
    • 11844267183 scopus 로고    scopus 로고
    • Phosphodiesterase-4 inhibitors for asthma and chronic obstructive pulmonary disease
    • Lipworth, B.J. (2005) Phosphodiesterase-4 inhibitors for asthma and chronic obstructive pulmonary disease. Lancet 365 : 167 175.
    • (2005) Lancet , vol.365 , pp. 167-175
    • Lipworth, B.J.1
  • 23
    • 33646132073 scopus 로고    scopus 로고
    • Mechanisms of drug action and drug resistance in Leishmania as basis for therapeutic target identification and design of antileishmanial modulators
    • Loiseau, P.M. Bories, C. (2006) Mechanisms of drug action and drug resistance in Leishmania as basis for therapeutic target identification and design of antileishmanial modulators. Curr Top Med Chem 6 : 539 550.
    • (2006) Curr Top Med Chem , vol.6 , pp. 539-550
    • Loiseau, P.M.1    Bories, C.2
  • 24
    • 31144433061 scopus 로고    scopus 로고
    • Cyclic nucleotide phosphodiesterase (PDE) superfamily: A new target for the development of specific therapeutic agents
    • Lugnier, C. (2006) Cyclic nucleotide phosphodiesterase (PDE) superfamily: a new target for the development of specific therapeutic agents. Pharmacol Ther 109 : 366 398.
    • (2006) Pharmacol Ther , vol.109 , pp. 366-398
    • Lugnier, C.1
  • 25
    • 33746629480 scopus 로고    scopus 로고
    • Phosphodiesterases in the CNS: Targets for drug development
    • Menniti, F.S., Faraci, W.S. Schmidt, C.J. (2006) Phosphodiesterases in the CNS: targets for drug development. Nat Rev Drug Discov 5 : 660 670.
    • (2006) Nat Rev Drug Discov , vol.5 , pp. 660-670
    • Menniti, F.S.1    Faraci, W.S.2    Schmidt, C.J.3
  • 26
    • 34247579197 scopus 로고    scopus 로고
    • Chemotherapy of leishmaniasis: Past, present and future
    • Mishra, J., Saxena, A. Singh, S. (2007) Chemotherapy of leishmaniasis: past, present and future. Curr Med Chem 14 : 1153 1169.
    • (2007) Curr Med Chem , vol.14 , pp. 1153-1169
    • Mishra, J.1    Saxena, A.2    Singh, S.3
  • 27
    • 0031053055 scopus 로고    scopus 로고
    • AMoRe: An automated molecular replacement program package
    • Navaza, J. Saludjian, P. (1997) AMoRe: an automated molecular replacement program package. Methods Enzymol 276 : 581 594.
    • (1997) Methods Enzymol , vol.276 , pp. 581-594
    • Navaza, J.1    Saludjian, P.2
  • 28
    • 33847068206 scopus 로고    scopus 로고
    • Overview of PDEs and their regulation
    • Omori, K. Kotera, J. (2007) Overview of PDEs and their regulation. Circ Res 100 : 309 327.
    • (2007) Circ Res , vol.100 , pp. 309-327
    • Omori, K.1    Kotera, J.2
  • 29
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray diffraction data collected in oscillation mode
    • Otwinowski, Z. Minor, W. (1997) Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol 276 : 307 326.
    • (1997) Methods Enzymol , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 30
    • 33748324543 scopus 로고    scopus 로고
    • Flavonoids attenuate cardiovascular disease, inhibit phosphodiesterase, and modulate lipid homeostasis in adipose tissue and liver
    • Peluso, M.R. (2006) Flavonoids attenuate cardiovascular disease, inhibit phosphodiesterase, and modulate lipid homeostasis in adipose tissue and liver. Exp Biol Med 231 : 1287 1299.
    • (2006) Exp Biol Med , vol.231 , pp. 1287-1299
    • Peluso, M.R.1
  • 31
    • 0034049859 scopus 로고    scopus 로고
    • Characterization of cyclic AMP phosphodiesterases in Leishmania mexicana and purification of a soluble form.
    • Rascon, A., Viloria, M.E., De-Chiara, L. Dubra, M.E. (2000) Characterization of cyclic AMP phosphodiesterases in Leishmania mexicana and purification of a soluble form. Mol Biochem Parasitol 106 : 283 292.
    • (2000) Mol Biochem Parasitol , vol.106 , pp. 283-292
    • Rascon, A.1    Viloria, M.E.2    De-Chiara, L.3    Dubra, M.E.4
  • 32
    • 33846205114 scopus 로고    scopus 로고
    • Molecular diagnosis of leishmaniasis: Current status and future applications
    • Reithinger, R. Dujardin, J.C. (2007) Molecular diagnosis of leishmaniasis: current status and future applications. J Clin Microbiol 45 : 21 25.
    • (2007) J Clin Microbiol , vol.45 , pp. 21-25
    • Reithinger, R.1    Dujardin, J.C.2
  • 33
    • 0036717930 scopus 로고    scopus 로고
    • Phosphodiesterase 5 inhibitors: Current status and potential applications
    • Rotella, D.P. (2002) Phosphodiesterase 5 inhibitors: current status and potential applications. Nat Rev Drug Discov 1 : 674 682.
    • (2002) Nat Rev Drug Discov , vol.1 , pp. 674-682
    • Rotella, D.P.1
  • 34
    • 33748570738 scopus 로고    scopus 로고
    • Natural products from plants as drug candidates and lead compounds against leishmaniasis and trypanosomiasis
    • Salem, M.M. Werbovetz, K.A. (2006) Natural products from plants as drug candidates and lead compounds against leishmaniasis and trypanosomiasis. Curr Med Chem 13 : 2571 2598.
    • (2006) Curr Med Chem , vol.13 , pp. 2571-2598
    • Salem, M.M.1    Werbovetz, K.A.2
  • 35
    • 2442700405 scopus 로고    scopus 로고
    • Crystal structure of human phosphodiesterase 3B: Atomic basis for substrate and inhibitor specificity
    • Scapin, G., Patel, S.B., Chung, C., Varnerin, J.P., Edmondson, S.D., Mastracchio, A. et al. (2004) Crystal structure of human phosphodiesterase 3B: atomic basis for substrate and inhibitor specificity. Biochemistry 43 : 6091 6100.
    • (2004) Biochemistry , vol.43 , pp. 6091-6100
    • Scapin, G.1    Patel, S.B.2    Chung, C.3    Varnerin, J.P.4    Edmondson, S.D.5    Mastracchio, A.6
  • 36
    • 33646700031 scopus 로고    scopus 로고
    • New world cutaneous leishmaniasis in travellers
    • Schwartz, E., Hatz, C. Blum, J. (2006) New world cutaneous leishmaniasis in travellers. Lancet Infect Dis 6 : 342 349.
    • (2006) Lancet Infect Dis , vol.6 , pp. 342-349
    • Schwartz, E.1    Hatz, C.2    Blum, J.3
  • 37
    • 24744456706 scopus 로고    scopus 로고
    • Multiple elements jointly determine inhibitor selectivity of cyclic nucleotide phosphodiesterases 4 and 7
    • Wang, H., Liu, Y., Chen, Y., Robinson, H. Ke, H. (2005) Multiple elements jointly determine inhibitor selectivity of cyclic nucleotide phosphodiesterases 4 and 7. J Biol Chem 280 : 30949 30955.
    • (2005) J Biol Chem , vol.280 , pp. 30949-30955
    • Wang, H.1    Liu, Y.2    Chen, Y.3    Robinson, H.4    Ke, H.5
  • 38
    • 33746342145 scopus 로고    scopus 로고
    • Multiple conformations of phosphodiesterase-5: Implications for enzyme function and drug development
    • Wang, H., Liu, Y., Huai, Q., Cai, J., Zoraghi, R., Francis, S.H., et al. (2006) Multiple conformations of phosphodiesterase-5: implications for enzyme function and drug development. J Biol Chem 281 : 21469 21479.
    • (2006) J Biol Chem , vol.281 , pp. 21469-21479
    • Wang, H.1    Liu, Y.2    Huai, Q.3    Cai, J.4    Zoraghi, R.5    Francis, S.H.6
  • 39
    • 34347240412 scopus 로고    scopus 로고
    • Structural insight into substrate specificity of phospodiesterase 10
    • Wang, H., Liu, Y., Hou, J., Zheng, M., Robinson, H. Ke, H. (2007) Structural insight into substrate specificity of phospodiesterase 10. Proc Natl Acad Sci USA 104 : 5782 5787.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 5782-5787
    • Wang, H.1    Liu, Y.2    Hou, J.3    Zheng, M.4    Robinson, H.5    Ke, H.6
  • 40
    • 0034625541 scopus 로고    scopus 로고
    • Atomic structure of PDE4: Insight into phosphodiesterase mechanism and specificity
    • Xu, R.X., Hassell, A.M., Vanderwall, D., Lambert, M.H., Holmes, W.D., Luther, M.A., et al. (2000) Atomic structure of PDE4: insight into phosphodiesterase mechanism and specificity. Science 288 : 1822 1825.
    • (2000) Science , vol.288 , pp. 1822-1825
    • Xu, R.X.1    Hassell, A.M.2    Vanderwall, D.3    Lambert, M.H.4    Holmes, W.D.5    Luther, M.A.6
  • 41
    • 4344676386 scopus 로고    scopus 로고
    • A glutamine switch mechanism for nucleotide selectivity by phosphodiesterases
    • Zhang, K.Y., Card, G.L., Suzuki, Y., Artis, D.R., Fong, D., Gillette, S., et al. (2004) A glutamine switch mechanism for nucleotide selectivity by phosphodiesterases. Mol Cell 15 : 279 286.
    • (2004) Mol Cell , vol.15 , pp. 279-286
    • Zhang, K.Y.1    Card, G.L.2    Suzuki, Y.3    Artis, D.R.4    Fong, D.5    Gillette, S.6


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