-
1
-
-
1642499415
-
Exportin 5 is a RanGTP-dependent dsRNA-binding protein that mediates nuclear export of pre-miRNAs
-
Bohnsack M.T., Czaplinski K., and Gorlich D. Exportin 5 is a RanGTP-dependent dsRNA-binding protein that mediates nuclear export of pre-miRNAs. RNA 10 (2004) 185-191
-
(2004)
RNA
, vol.10
, pp. 185-191
-
-
Bohnsack, M.T.1
Czaplinski, K.2
Gorlich, D.3
-
4
-
-
33846283385
-
The evolution of gene regulation by transcription factors and microRNAs
-
Chen K., and Rajewsky N. The evolution of gene regulation by transcription factors and microRNAs. Nat. Rev. Genet. 8 (2007) 93-103
-
(2007)
Nat. Rev. Genet.
, vol.8
, pp. 93-103
-
-
Chen, K.1
Rajewsky, N.2
-
5
-
-
27944507676
-
Stabilization and analysis of intron lariats in vivo
-
Conklin J.F., Goldman A., and Lopez A.J. Stabilization and analysis of intron lariats in vivo. Methods 37 (2005) 368-375
-
(2005)
Methods
, vol.37
, pp. 368-375
-
-
Conklin, J.F.1
Goldman, A.2
Lopez, A.J.3
-
6
-
-
1642374097
-
Specificity of microRNA target selection in translational repression
-
Doench J.G., and Sharp P.A. Specificity of microRNA target selection in translational repression. Genes Dev. 18 (2004) 504-511
-
(2004)
Genes Dev.
, vol.18
, pp. 504-511
-
-
Doench, J.G.1
Sharp, P.A.2
-
7
-
-
28044455435
-
microPrimer: the biogenesis and function of microRNA
-
Du T., and Zamore P.D. microPrimer: the biogenesis and function of microRNA. Development 132 (2005) 4645-4652
-
(2005)
Development
, vol.132
, pp. 4645-4652
-
-
Du, T.1
Zamore, P.D.2
-
8
-
-
29144505309
-
The widespread impact of mammalian MicroRNAs on mRNA repression and evolution
-
Farh K.K., Grimson A., Jan C., Lewis B.P., Johnston W.K., Lim L.P., Burge C.B., and Bartel D.P. The widespread impact of mammalian MicroRNAs on mRNA repression and evolution. Science 310 (2005) 1817-1821
-
(2005)
Science
, vol.310
, pp. 1817-1821
-
-
Farh, K.K.1
Grimson, A.2
Jan, C.3
Lewis, B.P.4
Johnston, W.K.5
Lim, L.P.6
Burge, C.B.7
Bartel, D.P.8
-
9
-
-
22744433240
-
Normal microRNA maturation and germ-line stem cell maintenance requires Loquacious, a double-stranded RNA-binding domain protein
-
Forstemann K., Tomari Y., Du T., Vagin V.V., Denli A.M., Bratu D.P., Klattenhoff C., Theurkauf W.E., and Zamore P.D. Normal microRNA maturation and germ-line stem cell maintenance requires Loquacious, a double-stranded RNA-binding domain protein. PLoS Biol. 3 (2005) e236
-
(2005)
PLoS Biol.
, vol.3
-
-
Forstemann, K.1
Tomari, Y.2
Du, T.3
Vagin, V.V.4
Denli, A.M.5
Bratu, D.P.6
Klattenhoff, C.7
Theurkauf, W.E.8
Zamore, P.D.9
-
10
-
-
17844364875
-
Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing
-
Grishok A., Pasquinelli A., Conte D., Li N., Parrish S., Ha I., Baillie D.L., Fire A., Ruvkun G., and Mello C.C. Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing. Cell 106 (2001) 23-34
-
(2001)
Cell
, vol.106
, pp. 23-34
-
-
Grishok, A.1
Pasquinelli, A.2
Conte, D.3
Li, N.4
Parrish, S.5
Ha, I.6
Baillie, D.L.7
Fire, A.8
Ruvkun, G.9
Mello, C.C.10
-
11
-
-
27344456287
-
microRNA target predictions across seven Drosophila species and comparison to mammalian targets
-
Grun D., Wang Y.-L., Langenberger D., Gunsalus K.C., and Rajewsky N. microRNA target predictions across seven Drosophila species and comparison to mammalian targets. PLoS Comp. Biol. 1 (2005) e13
-
(2005)
PLoS Comp. Biol.
, vol.1
-
-
Grun, D.1
Wang, Y.-L.2
Langenberger, D.3
Gunsalus, K.C.4
Rajewsky, N.5
-
12
-
-
33744520104
-
Molecular basis for the recognition of primary microRNAs by the Drosha-DGCR8 complex
-
Han J., Lee Y., Yeom K.H., Nam J.W., Heo I., Rhee J.K., Sohn S.Y., Cho Y., Zhang B.T., and Kim V.N. Molecular basis for the recognition of primary microRNAs by the Drosha-DGCR8 complex. Cell 125 (2006) 887-901
-
(2006)
Cell
, vol.125
, pp. 887-901
-
-
Han, J.1
Lee, Y.2
Yeom, K.H.3
Nam, J.W.4
Heo, I.5
Rhee, J.K.6
Sohn, S.Y.7
Cho, Y.8
Zhang, B.T.9
Kim, V.N.10
-
13
-
-
0035800521
-
A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA
-
Hutvagner G., McLachlan J., Pasquinelli A., Balint E., Tuschl T., and Zamore P.D. A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA. Science 293 (2001) 834-838
-
(2001)
Science
, vol.293
, pp. 834-838
-
-
Hutvagner, G.1
McLachlan, J.2
Pasquinelli, A.3
Balint, E.4
Tuschl, T.5
Zamore, P.D.6
-
14
-
-
23044462450
-
Dicer-1 and R3D1-L catalyze microRNA maturation in Drosophila
-
Jiang F., Ye X., Liu X., Fincher L., McKearin D., and Liu Q. Dicer-1 and R3D1-L catalyze microRNA maturation in Drosophila. Genes Dev. 19 (2005) 1674-1679
-
(2005)
Genes Dev.
, vol.19
, pp. 1674-1679
-
-
Jiang, F.1
Ye, X.2
Liu, X.3
Fincher, L.4
McKearin, D.5
Liu, Q.6
-
15
-
-
0035887005
-
Dicer functions in RNA interference and in synthesis of small RNAs involved in developmental timing in C. elegans
-
Ketting R., Fischer S., Bernstein E., Sijen T., Hannon G., and Plasterk R.H. Dicer functions in RNA interference and in synthesis of small RNAs involved in developmental timing in C. elegans. Genes Dev. 15 (2001) 2654-2659
-
(2001)
Genes Dev.
, vol.15
, pp. 2654-2659
-
-
Ketting, R.1
Fischer, S.2
Bernstein, E.3
Sijen, T.4
Hannon, G.5
Plasterk, R.H.6
-
16
-
-
0142165224
-
Functional siRNAs and miRNAs exhibit strand bias
-
Khvorova A., Reynolds A., and Jayasena S.D. Functional siRNAs and miRNAs exhibit strand bias. Cell 115 (2003) 209-216
-
(2003)
Cell
, vol.115
, pp. 209-216
-
-
Khvorova, A.1
Reynolds, A.2
Jayasena, S.D.3
-
17
-
-
33846945735
-
Processing of intronic microRNAs
-
Kim Y.K., and Kim V.N. Processing of intronic microRNAs. EMBO J. 26 (2007) 775-783
-
(2007)
EMBO J.
, vol.26
, pp. 775-783
-
-
Kim, Y.K.1
Kim, V.N.2
-
18
-
-
0035955374
-
Identification of novel genes coding for small expressed RNAs
-
Lagos-Quintana M., Rauhut R., Lendeckel W., and Tuschl T. Identification of novel genes coding for small expressed RNAs. Science 294 (2001) 853-858
-
(2001)
Science
, vol.294
, pp. 853-858
-
-
Lagos-Quintana, M.1
Rauhut, R.2
Lendeckel, W.3
Tuschl, T.4
-
19
-
-
0036544755
-
Micro RNAs are complementary to 3′ UTR sequence motifs that mediate negative post-transcriptional regulation
-
Lai E.C. Micro RNAs are complementary to 3′ UTR sequence motifs that mediate negative post-transcriptional regulation. Nat. Genet. 30 (2002) 363-364
-
(2002)
Nat. Genet.
, vol.30
, pp. 363-364
-
-
Lai, E.C.1
-
20
-
-
0031469465
-
The Bearded box, a novel 3′ UTR sequence motif, mediates negative post-transcriptional regulation of Bearded and Enhancer of split Complex gene expression
-
Lai E.C., and Posakony J.W. The Bearded box, a novel 3′ UTR sequence motif, mediates negative post-transcriptional regulation of Bearded and Enhancer of split Complex gene expression. Development 124 (1997) 4847-4856
-
(1997)
Development
, vol.124
, pp. 4847-4856
-
-
Lai, E.C.1
Posakony, J.W.2
-
21
-
-
0032568805
-
Regulation of Drosophila neurogenesis by RNA:RNA duplexes?
-
Lai E.C., and Posakony J.W. Regulation of Drosophila neurogenesis by RNA:RNA duplexes?. Cell 93 (1998) 1103-1104
-
(1998)
Cell
, vol.93
, pp. 1103-1104
-
-
Lai, E.C.1
Posakony, J.W.2
-
22
-
-
0031767514
-
The K box, a conserved 3′ UTR sequence motif, negatively regulates accumulation of Enhancer of split Complex transcripts
-
Lai E.C., Burks C., and Posakony J.W. The K box, a conserved 3′ UTR sequence motif, negatively regulates accumulation of Enhancer of split Complex transcripts. Development 125 (1998) 4077-4088
-
(1998)
Development
, vol.125
, pp. 4077-4088
-
-
Lai, E.C.1
Burks, C.2
Posakony, J.W.3
-
24
-
-
18244402404
-
Pervasive regulation of Drosophila Notch target genes by GY-box-, Brd-box-, and K-box-class microRNAs
-
Lai E.C., Tam B., and Rubin G.M. Pervasive regulation of Drosophila Notch target genes by GY-box-, Brd-box-, and K-box-class microRNAs. Genes Dev. 19 (2005) 1067-1080
-
(2005)
Genes Dev.
, vol.19
, pp. 1067-1080
-
-
Lai, E.C.1
Tam, B.2
Rubin, G.M.3
-
25
-
-
0035955361
-
An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
-
Lau N., Lim L., Weinstein E., and Bartel D.P. An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans. Science 294 (2001) 858-862
-
(2001)
Science
, vol.294
, pp. 858-862
-
-
Lau, N.1
Lim, L.2
Weinstein, E.3
Bartel, D.P.4
-
26
-
-
0035955366
-
An extensive class of small RNAs in Caenorhabditis elegans
-
Lee R.C., and Ambros V. An extensive class of small RNAs in Caenorhabditis elegans. Science 294 (2001) 862-864
-
(2001)
Science
, vol.294
, pp. 862-864
-
-
Lee, R.C.1
Ambros, V.2
-
27
-
-
0027751663
-
The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
-
Lee R.C., Feinbaum R.L., and Ambros V. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75 (1993) 843-854
-
(1993)
Cell
, vol.75
, pp. 843-854
-
-
Lee, R.C.1
Feinbaum, R.L.2
Ambros, V.3
-
28
-
-
0141843656
-
The nuclear RNase III Drosha initiates microRNA processing
-
Lee Y., Ahn C., Han J., Choi H., Kim J., Yim J., Lee J., Provost P., Radmark O., Kim S., and Kim V.N. The nuclear RNase III Drosha initiates microRNA processing. Nature 425 (2003) 415-419
-
(2003)
Nature
, vol.425
, pp. 415-419
-
-
Lee, Y.1
Ahn, C.2
Han, J.3
Choi, H.4
Kim, J.5
Yim, J.6
Lee, J.7
Provost, P.8
Radmark, O.9
Kim, S.10
Kim, V.N.11
-
29
-
-
8144225486
-
MicroRNA genes are transcribed by RNA polymerase II
-
Lee Y., Kim M., Han J., Yeom K.H., Lee S., Baek S.H., and Kim V.N. MicroRNA genes are transcribed by RNA polymerase II. EMBO J. 23 (2004) 4051-4060
-
(2004)
EMBO J.
, vol.23
, pp. 4051-4060
-
-
Lee, Y.1
Kim, M.2
Han, J.3
Yeom, K.H.4
Lee, S.5
Baek, S.H.6
Kim, V.N.7
-
30
-
-
1842816517
-
Distinct Roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA Silencing Pathways
-
Lee Y.S., Nakahara K., Pham J.W., Kim K., He Z., Sontheimer E.J., and Carthew R.W. Distinct Roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA Silencing Pathways. Cell 117 (2004) 69-81
-
(2004)
Cell
, vol.117
, pp. 69-81
-
-
Lee, Y.S.1
Nakahara, K.2
Pham, J.W.3
Kim, K.4
He, Z.5
Sontheimer, E.J.6
Carthew, R.W.7
-
31
-
-
0346094457
-
Prediction of mammalian microRNA targets
-
Lewis B.P., Shih I.H., Jones-Rhoades M.W., Bartel D.P., and Burge C.B. Prediction of mammalian microRNA targets. Cell 115 (2003) 787-798
-
(2003)
Cell
, vol.115
, pp. 787-798
-
-
Lewis, B.P.1
Shih, I.H.2
Jones-Rhoades, M.W.3
Bartel, D.P.4
Burge, C.B.5
-
32
-
-
0347988235
-
Nuclear export of microRNA precursors
-
Lund E., Guttinger S., Calado A., Dahlberg J.E., and Kutay U. Nuclear export of microRNA precursors. Science 303 (2004) 95-98
-
(2004)
Science
, vol.303
, pp. 95-98
-
-
Lund, E.1
Guttinger, S.2
Calado, A.3
Dahlberg, J.E.4
Kutay, U.5
-
33
-
-
28444437427
-
Slicer function of Drosophila Argonautes and its involvement in RISC formation
-
Miyoshi K., Tsukumo H., Nagami T., Siomi H., and Siomi M.C. Slicer function of Drosophila Argonautes and its involvement in RISC formation. Genes Dev. 19 (2005) 2837-2848
-
(2005)
Genes Dev.
, vol.19
, pp. 2837-2848
-
-
Miyoshi, K.1
Tsukumo, H.2
Nagami, T.3
Siomi, H.4
Siomi, M.C.5
-
34
-
-
0030970775
-
The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA
-
Moss E.G., Lee R.C., and Ambros V. The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA. Cell 88 (1997) 637-646
-
(1997)
Cell
, vol.88
, pp. 637-646
-
-
Moss, E.G.1
Lee, R.C.2
Ambros, V.3
-
35
-
-
3142729150
-
Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways
-
Okamura K., Ishizuka A., Siomi H., and Siomi M.C. Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways. Genes Dev. 18 (2004) 1655-1666
-
(2004)
Genes Dev.
, vol.18
, pp. 1655-1666
-
-
Okamura, K.1
Ishizuka, A.2
Siomi, H.3
Siomi, M.C.4
-
36
-
-
0000866275
-
Intronic snoRNA biosynthesis in Saccharomyces cerevisiae depends on the lariat-debranching enzyme: intron length effects and activity of a precursor snoRNA
-
Ooi S.L., Samarsky D.A., Fournier M.J., and Boeke J.D. Intronic snoRNA biosynthesis in Saccharomyces cerevisiae depends on the lariat-debranching enzyme: intron length effects and activity of a precursor snoRNA. RNA 4 (1998) 1096-1110
-
(1998)
RNA
, vol.4
, pp. 1096-1110
-
-
Ooi, S.L.1
Samarsky, D.A.2
Fournier, M.J.3
Boeke, J.D.4
-
37
-
-
0034597777
-
Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA
-
Pasquinelli A.E., Reinhart B.J., Slack F., Martindale M.Q., Kuroda M.I., Maller B., Hayward D.C., Ball E.E., Degnan B., Müller P., et al. Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA. Nature 408 (2000) 86-89
-
(2000)
Nature
, vol.408
, pp. 86-89
-
-
Pasquinelli, A.E.1
Reinhart, B.J.2
Slack, F.3
Martindale, M.Q.4
Kuroda, M.I.5
Maller, B.6
Hayward, D.C.7
Ball, E.E.8
Degnan, B.9
Müller, P.10
-
38
-
-
0034708122
-
The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans
-
Reinhart B.J., Slack F., Basson M., Pasquinelli A., Bettinger J., Rougvie A., Horvitz H.R., and Ruvkun G. The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans. Nature 403 (2000) 901-906
-
(2000)
Nature
, vol.403
, pp. 901-906
-
-
Reinhart, B.J.1
Slack, F.2
Basson, M.3
Pasquinelli, A.4
Bettinger, J.5
Rougvie, A.6
Horvitz, H.R.7
Ruvkun, G.8
-
39
-
-
6344281172
-
Identification of mammalian microRNA host genes and transcription units
-
Rodriguez A., Griffiths-Jones S., Ashurst J.L., and Bradley A. Identification of mammalian microRNA host genes and transcription units. Genome Res. 14 (2004) 1902-1910
-
(2004)
Genome Res.
, vol.14
, pp. 1902-1910
-
-
Rodriguez, A.1
Griffiths-Jones, S.2
Ashurst, J.L.3
Bradley, A.4
-
40
-
-
34447097693
-
Intronic microRNA precursors that bypass Drosha processing
-
Ruby J.G., Jan C., and Bartel D.P. Intronic microRNA precursors that bypass Drosha processing. Nature 448 (2007) 83-86
-
(2007)
Nature
, vol.448
, pp. 83-86
-
-
Ruby, J.G.1
Jan, C.2
Bartel, D.P.3
-
41
-
-
22744454230
-
Processing of pre-microRNAs by the Dicer-1-Loquacious complex in Drosophila cells
-
Saito K., Ishizuka A., Siomi H., and Siomi M.C. Processing of pre-microRNAs by the Dicer-1-Loquacious complex in Drosophila cells. PLoS Biol. 3 (2005) e235
-
(2005)
PLoS Biol.
, vol.3
-
-
Saito, K.1
Ishizuka, A.2
Siomi, H.3
Siomi, M.C.4
-
42
-
-
10744225153
-
Asymmetry in the assembly of the RNAi enzyme complex
-
Schwarz D.S., Hutvagner G., Du T., Xu Z., Aronin N., and Zamore P.D. Asymmetry in the assembly of the RNAi enzyme complex. Cell 115 (2003) 199-208
-
(2003)
Cell
, vol.115
, pp. 199-208
-
-
Schwarz, D.S.1
Hutvagner, G.2
Du, T.3
Xu, Z.4
Aronin, N.5
Zamore, P.D.6
-
43
-
-
33750214650
-
Exportin-5 orthologues are functionally divergent among species
-
Shibata S., Sasaki M., Miki T., Shimamoto A., Furuichi Y., Katahira J., and Yoneda Y. Exportin-5 orthologues are functionally divergent among species. Nucleic Acids Res. 34 (2006) 4711-4721
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 4711-4721
-
-
Shibata, S.1
Sasaki, M.2
Miki, T.3
Shimamoto, A.4
Furuichi, Y.5
Katahira, J.6
Yoneda, Y.7
-
45
-
-
28944439309
-
Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3′UTR evolution
-
Stark A., Brennecke J., Bushati N., Russell R.B., and Cohen S.M. Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3′UTR evolution. Cell 123 (2005) 1133-1146
-
(2005)
Cell
, vol.123
, pp. 1133-1146
-
-
Stark, A.1
Brennecke, J.2
Bushati, N.3
Russell, R.B.4
Cohen, S.M.5
-
46
-
-
33644768174
-
Control of translation and mRNA degradation by miRNAs and siRNAs
-
Valencia-Sanchez M.A., Liu J., Hannon G.J., and Parker R. Control of translation and mRNA degradation by miRNAs and siRNAs. Genes Dev. 20 (2006) 515-524
-
(2006)
Genes Dev.
, vol.20
, pp. 515-524
-
-
Valencia-Sanchez, M.A.1
Liu, J.2
Hannon, G.J.3
Parker, R.4
-
47
-
-
33847323881
-
DGCR8 is essential for microRNA biogenesis and silencing of embryonic stem cell self-renewal
-
Wang Y., Medvid R., Melton C., Jaenisch R., and Blelloch R. DGCR8 is essential for microRNA biogenesis and silencing of embryonic stem cell self-renewal. Nat. Genet. 39 (2007) 380-385
-
(2007)
Nat. Genet.
, vol.39
, pp. 380-385
-
-
Wang, Y.1
Medvid, R.2
Melton, C.3
Jaenisch, R.4
Blelloch, R.5
-
48
-
-
0027730383
-
Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans
-
Wightman B., Ha I., and Ruvkun G. Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans. Cell 75 (1993) 855-862
-
(1993)
Cell
, vol.75
, pp. 855-862
-
-
Wightman, B.1
Ha, I.2
Ruvkun, G.3
-
49
-
-
0034711308
-
Human RNase III is a 160-kDa protein involved in preribosomal RNA processing
-
Wu H., Xu H., Miraglia L.J., and Crooke S.T. Human RNase III is a 160-kDa protein involved in preribosomal RNA processing. J. Biol. Chem. 275 (2000) 36957-36965
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 36957-36965
-
-
Wu, H.1
Xu, H.2
Miraglia, L.J.3
Crooke, S.T.4
-
50
-
-
0347361541
-
Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs
-
Yi R., Qin Y., Macara I.G., and Cullen B.R. Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs. Genes Dev. 17 (2003) 3011-3016
-
(2003)
Genes Dev.
, vol.17
, pp. 3011-3016
-
-
Yi, R.1
Qin, Y.2
Macara, I.G.3
Cullen, B.R.4
|