-
1
-
-
0031954925
-
Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms
-
Wallin E., and von Heijne G. Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms. Protein Sci. 7 (1998) 1029-1038
-
(1998)
Protein Sci.
, vol.7
, pp. 1029-1038
-
-
Wallin, E.1
von Heijne, G.2
-
2
-
-
1542723470
-
Transmembrane protein domains rarely use covalent domain recombination as an evolutionary mechanism
-
Liu Y., Gerstein M., and Engelman D.M. Transmembrane protein domains rarely use covalent domain recombination as an evolutionary mechanism. Proc. Natl. Acad. Sci. USA 101 (2004) 3495-3497
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 3495-3497
-
-
Liu, Y.1
Gerstein, M.2
Engelman, D.M.3
-
3
-
-
1542376209
-
Missense mutations in transmembrane domains of proteins: phenotypic propensity of polar residues for human disease
-
Partridge A.W., Therien A.G., and Deber C.M. Missense mutations in transmembrane domains of proteins: phenotypic propensity of polar residues for human disease. Proteins 54 (2004) 648-656
-
(2004)
Proteins
, vol.54
, pp. 648-656
-
-
Partridge, A.W.1
Therien, A.G.2
Deber, C.M.3
-
4
-
-
0025249842
-
Membrane protein folding and oligomerization: the two-stage model
-
Popot J.L., and Engelman D.M. Membrane protein folding and oligomerization: the two-stage model. Biochemistry 29 (1990) 4031-4037
-
(1990)
Biochemistry
, vol.29
, pp. 4031-4037
-
-
Popot, J.L.1
Engelman, D.M.2
-
5
-
-
0037379072
-
How do helix-helix interactions help determine the folds of membrane proteins? Perspectives from the study of homo-oligomeric helical bundles
-
DeGrado W.F., Gratkowski H., and Lear J.D. How do helix-helix interactions help determine the folds of membrane proteins? Perspectives from the study of homo-oligomeric helical bundles. Protein Sci. 12 (2003) 647-665
-
(2003)
Protein Sci.
, vol.12
, pp. 647-665
-
-
DeGrado, W.F.1
Gratkowski, H.2
Lear, J.D.3
-
6
-
-
0242657348
-
Membrane protein folding: beyond the two stage model
-
Engelman D.M., et al. Membrane protein folding: beyond the two stage model. FEBS Lett. 555 (2003) 122-125
-
(2003)
FEBS Lett.
, vol.555
, pp. 122-125
-
-
Engelman, D.M.1
-
7
-
-
28444488355
-
Solving the membrane protein folding problem
-
Bowie J.U. Solving the membrane protein folding problem. Nature 438 (2005) 581-589
-
(2005)
Nature
, vol.438
, pp. 581-589
-
-
Bowie, J.U.1
-
8
-
-
0031574072
-
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25 (1997) 4876-4882
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
9
-
-
0032478818
-
The structure of the potassium channel: molecular basis of K+ conduction and selectivity
-
Doyle D.A., Morais Cabral J., Pfuetzner R.A., Kuo A., Gulbis J.M., Cohen S.L., Chait B.T., and MacKinnon R. The structure of the potassium channel: molecular basis of K+ conduction and selectivity. Science 280 (1998) 69-77
-
(1998)
Science
, vol.280
, pp. 69-77
-
-
Doyle, D.A.1
Morais Cabral, J.2
Pfuetzner, R.A.3
Kuo, A.4
Gulbis, J.M.5
Cohen, S.L.6
Chait, B.T.7
MacKinnon, R.8
-
10
-
-
23244456428
-
Crystal structure of a mammalian voltage-dependent Shaker family K+ channel
-
Long S.B., Campbell E.B., and Mackinnon R. Crystal structure of a mammalian voltage-dependent Shaker family K+ channel. Science 309 (2005) 897-903
-
(2005)
Science
, vol.309
, pp. 897-903
-
-
Long, S.B.1
Campbell, E.B.2
Mackinnon, R.3
-
11
-
-
0003742069
-
-
Department of Biochemistry and Molecular Biology, University College London
-
Hubbard S.J., and Thornton J.M. 'NACCESS', Computer Program (1993), Department of Biochemistry and Molecular Biology, University College London
-
(1993)
'NACCESS', Computer Program
-
-
Hubbard, S.J.1
Thornton, J.M.2
-
12
-
-
33746082078
-
Lipid solvation effects contribute to the affinity of Gly-xxx-Gly motif-mediated helix-helix interactions
-
Johnson R.M., Rath A., Melnyk R.A., and Deber C.M. Lipid solvation effects contribute to the affinity of Gly-xxx-Gly motif-mediated helix-helix interactions. Biochemistry 45 (2006) 8507-8515
-
(2006)
Biochemistry
, vol.45
, pp. 8507-8515
-
-
Johnson, R.M.1
Rath, A.2
Melnyk, R.A.3
Deber, C.M.4
-
13
-
-
33644850534
-
Crystal structure of AqpZ tetramer reveals two distinct Arg-189 conformations associated with water permeation through the narrowest constriction of the water-conducting channel
-
Jiang J., Daniels B.V., and Fu D. Crystal structure of AqpZ tetramer reveals two distinct Arg-189 conformations associated with water permeation through the narrowest constriction of the water-conducting channel. J. Biol. Chem. 281 (2006) 454-460
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 454-460
-
-
Jiang, J.1
Daniels, B.V.2
Fu, D.3
-
14
-
-
0032817780
-
Helix packing in polytopic membrane proteins: role of glycine in transmembrane helix association
-
Javadpour M.M., Eilers M., Groesbeek M., and Smith S.O. Helix packing in polytopic membrane proteins: role of glycine in transmembrane helix association. Biophys. J. 77 (1999) 1609-1618
-
(1999)
Biophys. J.
, vol.77
, pp. 1609-1618
-
-
Javadpour, M.M.1
Eilers, M.2
Groesbeek, M.3
Smith, S.O.4
-
15
-
-
0000338489
-
Comparison of solvent-inaccessible cores of homologous proteins: definitions useful for protein modelling
-
Hubbard T.J., and Blundell T.L. Comparison of solvent-inaccessible cores of homologous proteins: definitions useful for protein modelling. Protein Eng. 1 (1987) 159-171
-
(1987)
Protein Eng.
, vol.1
, pp. 159-171
-
-
Hubbard, T.J.1
Blundell, T.L.2
-
16
-
-
28044467526
-
Mutagenesis-based definitions and probes of residue burial in proteins
-
Bajaj K., Chakrabarti P., and Varadarajan R. Mutagenesis-based definitions and probes of residue burial in proteins. Proc. Natl. Acad. Sci. USA 102 (2005) 16221-16226
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 16221-16226
-
-
Bajaj, K.1
Chakrabarti, P.2
Varadarajan, R.3
-
17
-
-
0037136435
-
Genomic analysis of membrane protein families: abundance and conserved motifs
-
(research0054)
-
Liu Y., Engelman D.M., and Gerstein M. Genomic analysis of membrane protein families: abundance and conserved motifs. Genome Biol. 3 (2002) (research0054)
-
(2002)
Genome Biol.
, vol.3
-
-
Liu, Y.1
Engelman, D.M.2
Gerstein, M.3
-
18
-
-
4143085058
-
Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs
-
Senes A., Engel D.E., and DeGrado W.F. Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs. Curr. Opin. Struct. Biol. 14 (2004) 465-479
-
(2004)
Curr. Opin. Struct. Biol.
, vol.14
, pp. 465-479
-
-
Senes, A.1
Engel, D.E.2
DeGrado, W.F.3
-
19
-
-
0029860263
-
Flux coupling in a neuronal glutamate transporter
-
Zerangue N., and Kavanaugh M.P. Flux coupling in a neuronal glutamate transporter. Nature 383 (1996) 634-637
-
(1996)
Nature
, vol.383
, pp. 634-637
-
-
Zerangue, N.1
Kavanaugh, M.P.2
-
20
-
-
0029076899
-
An excitatory amino-acid transporter with properties of a ligand-gated chloride channel
-
Fairman W.A., Vandenberg R.J., Arriza J.L., Kavanaugh M.P., and Amara S.G. An excitatory amino-acid transporter with properties of a ligand-gated chloride channel. Nature 375 (1995) 599-603
-
(1995)
Nature
, vol.375
, pp. 599-603
-
-
Fairman, W.A.1
Vandenberg, R.J.2
Arriza, J.L.3
Kavanaugh, M.P.4
Amara, S.G.5
-
21
-
-
7244254186
-
Structure of a glutamate transporter homologue from Pyrococcus horikoshii
-
Yernool D., Boudker O., Jin Y., and Gouaux E. Structure of a glutamate transporter homologue from Pyrococcus horikoshii. Nature 431 (2004) 811-818
-
(2004)
Nature
, vol.431
, pp. 811-818
-
-
Yernool, D.1
Boudker, O.2
Jin, Y.3
Gouaux, E.4
-
22
-
-
0035943429
-
Helix-helix packing and interfacial pairwise interactions of residues in membrane proteins
-
Adamian L., and Liang J. Helix-helix packing and interfacial pairwise interactions of residues in membrane proteins. J. Mol. Biol. 311 (2001) 891-907
-
(2001)
J. Mol. Biol.
, vol.311
, pp. 891-907
-
-
Adamian, L.1
Liang, J.2
-
23
-
-
0042931286
-
Sequence motifs, polar interactions and conformational changes in helical membrane proteins
-
Curran A.R., and Engelman D.M. Sequence motifs, polar interactions and conformational changes in helical membrane proteins. Curr. Opin. Struct. Biol. 13 (2003) 412-417
-
(2003)
Curr. Opin. Struct. Biol.
, vol.13
, pp. 412-417
-
-
Curran, A.R.1
Engelman, D.M.2
-
24
-
-
0034327611
-
Hinges, swivels and switches: the role of prolines in signalling via transmembrane alpha-helices
-
Sansom M.S., and Weinstein H. Hinges, swivels and switches: the role of prolines in signalling via transmembrane alpha-helices. Trends Pharmacol. Sci. 21 (2000) 445-451
-
(2000)
Trends Pharmacol. Sci.
, vol.21
, pp. 445-451
-
-
Sansom, M.S.1
Weinstein, H.2
-
26
-
-
0030982098
-
Structural perspectives of phospholamban, a helical transmembrane pentamer
-
Arkin I.T., Adams P.D., Brunger A.T., Smith S.O., and Engelman D.M. Structural perspectives of phospholamban, a helical transmembrane pentamer. Annu. Rev. Biophys. Biomol. Struct. 26 (1997) 157-179
-
(1997)
Annu. Rev. Biophys. Biomol. Struct.
, vol.26
, pp. 157-179
-
-
Arkin, I.T.1
Adams, P.D.2
Brunger, A.T.3
Smith, S.O.4
Engelman, D.M.5
-
27
-
-
23344441824
-
The structure of phospholamban pentamer reveals a channel-like architecture in membranes
-
Oxenoid K., and Chou J.J. The structure of phospholamban pentamer reveals a channel-like architecture in membranes. Proc. Natl. Acad. Sci. USA 102 (2005) 10870-10875
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 10870-10875
-
-
Oxenoid, K.1
Chou, J.J.2
-
28
-
-
0033761347
-
Structure of a glycerol-conducting channel and the basis for its selectivity
-
Fu D., Libson A., Miercke L.J., Weitzman C., Nollert P., Krucinski J., and Stroud R.M. Structure of a glycerol-conducting channel and the basis for its selectivity. Science 290 (2000) 481-486
-
(2000)
Science
, vol.290
, pp. 481-486
-
-
Fu, D.1
Libson, A.2
Miercke, L.J.3
Weitzman, C.4
Nollert, P.5
Krucinski, J.6
Stroud, R.M.7
-
29
-
-
0037122805
-
X-ray structure of a ClC chloride channel at 3.0 A reveals the molecular basis of anion selectivity
-
Dutzler R., Campbell E.B., Cadene M., Chait B.T., and MacKinnon R. X-ray structure of a ClC chloride channel at 3.0 A reveals the molecular basis of anion selectivity. Nature 415 (2002) 287-294
-
(2002)
Nature
, vol.415
, pp. 287-294
-
-
Dutzler, R.1
Campbell, E.B.2
Cadene, M.3
Chait, B.T.4
MacKinnon, R.5
-
30
-
-
28544453561
-
Principles of selective ion transport in channels and pumps
-
Gouaux E., and Mackinnon R. Principles of selective ion transport in channels and pumps. Science 310 (2005) 1461-1465
-
(2005)
Science
, vol.310
, pp. 1461-1465
-
-
Gouaux, E.1
Mackinnon, R.2
-
31
-
-
33744965940
-
Evidence for assembly of small multidrug resistance proteins by a "two-faced transmembrane helix
-
Rath A., Melnyk R.A., and Deber C.M. Evidence for assembly of small multidrug resistance proteins by a "two-faced transmembrane helix. J. Biol. Chem. 281 (2006) 15546-15553
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 15546-15553
-
-
Rath, A.1
Melnyk, R.A.2
Deber, C.M.3
-
32
-
-
20944444557
-
Computational analysis of membrane proteins: genomic occurrence, structure prediction and helix interactions
-
Lehnert U., et al. Computational analysis of membrane proteins: genomic occurrence, structure prediction and helix interactions. Q. Rev. Biophys. 37 (2004) 121-146
-
(2004)
Q. Rev. Biophys.
, vol.37
, pp. 121-146
-
-
Lehnert, U.1
-
33
-
-
21744454309
-
Transmembrane helix prediction: a comparative evaluation and analysis
-
Cuthbertson J.M., Doyle D.A., and Sansom M.S. Transmembrane helix prediction: a comparative evaluation and analysis. Protein Eng. Des. Sel. 18 (2005) 295-308
-
(2005)
Protein Eng. Des. Sel.
, vol.18
, pp. 295-308
-
-
Cuthbertson, J.M.1
Doyle, D.A.2
Sansom, M.S.3
-
34
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling
-
Guex N., and Peitsch M.C. SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis 18 (1997) 2714-2723
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
35
-
-
17844369968
-
Structure of the rotor of the V-Type Na+-ATPase from Enterococcus hirae
-
Murata T., Yamato I., Kakinuma Y., Leslie A.G., and Walker J.E. Structure of the rotor of the V-Type Na+-ATPase from Enterococcus hirae. Science 308 (2005) 654-659
-
(2005)
Science
, vol.308
, pp. 654-659
-
-
Murata, T.1
Yamato, I.2
Kakinuma, Y.3
Leslie, A.G.4
Walker, J.E.5
-
36
-
-
17844367330
-
Structure of the rotor ring of F-Type Na+-ATPase from Ilyobacter tartaricus
-
Meier T., Polzer P., Diederichs K., Welte W., and Dimroth P. Structure of the rotor ring of F-Type Na+-ATPase from Ilyobacter tartaricus. Science 308 (2005) 659-662
-
(2005)
Science
, vol.308
, pp. 659-662
-
-
Meier, T.1
Polzer, P.2
Diederichs, K.3
Welte, W.4
Dimroth, P.5
-
37
-
-
0030932407
-
A transmembrane helix dimer: structure and implications
-
MacKenzie K.R., Prestegard J.H., and Engelman D.M. A transmembrane helix dimer: structure and implications. Science 276 (1997) 131-133
-
(1997)
Science
, vol.276
, pp. 131-133
-
-
MacKenzie, K.R.1
Prestegard, J.H.2
Engelman, D.M.3
-
38
-
-
0037052565
-
The E. coli BtuCD structure: a framework for ABC transporter architecture and mechanism
-
Locher K.P., Lee A.T., and Rees D.C. The E. coli BtuCD structure: a framework for ABC transporter architecture and mechanism. Science 296 (2002) 1091-1098
-
(2002)
Science
, vol.296
, pp. 1091-1098
-
-
Locher, K.P.1
Lee, A.T.2
Rees, D.C.3
-
39
-
-
0037418859
-
Gating the selectivity filter in ClC chloride channels
-
Dutzler R., Campbell E.B., and MacKinnon R. Gating the selectivity filter in ClC chloride channels. Science 300 (2003) 108-112
-
(2003)
Science
, vol.300
, pp. 108-112
-
-
Dutzler, R.1
Campbell, E.B.2
MacKinnon, R.3
-
40
-
-
33748644877
-
Structure of a bacterial multidrug ABC transporter
-
Dawson R.J., and Locher K.P. Structure of a bacterial multidrug ABC transporter. Nature 443 (2006) 180-185
-
(2006)
Nature
, vol.443
, pp. 180-185
-
-
Dawson, R.J.1
Locher, K.P.2
-
41
-
-
0032545321
-
Structure of the MscL homolog from Mycobacterium tuberculosis: a gated mechanosensitive ion channel
-
Chang G., Spencer R.H., Lee A.T., Barclay M.T., and Rees D.C. Structure of the MscL homolog from Mycobacterium tuberculosis: a gated mechanosensitive ion channel. Science 282 (1998) 2220-2226
-
(1998)
Science
, vol.282
, pp. 2220-2226
-
-
Chang, G.1
Spencer, R.H.2
Lee, A.T.3
Barclay, M.T.4
Rees, D.C.5
-
42
-
-
2242431668
-
Crystal structure of Escherichia coli MscS, a voltage-modulated and mechanosensitive channel
-
Bass R.B., Strop P., Barclay M., and Rees D.C. Crystal structure of Escherichia coli MscS, a voltage-modulated and mechanosensitive channel. Science 298 (2002) 1582-1587
-
(2002)
Science
, vol.298
, pp. 1582-1587
-
-
Bass, R.B.1
Strop, P.2
Barclay, M.3
Rees, D.C.4
-
43
-
-
33645748904
-
2+ transporter
-
2+ transporter. Nature 440 (2006) 833-837
-
(2006)
Nature
, vol.440
, pp. 833-837
-
-
Lunin, V.V.1
-
44
-
-
0031926765
-
Guidelines for membrane protein engineering derived from de novo designed model peptides
-
Liu L.P., and Deber C.M. Guidelines for membrane protein engineering derived from de novo designed model peptides. Biopolymers 47 (1998) 41-62
-
(1998)
Biopolymers
, vol.47
, pp. 41-62
-
-
Liu, L.P.1
Deber, C.M.2
|