-
1
-
-
60049090192
-
Immunoinformatics and its relevance to understanding human immune disease
-
Brusic, V and Petrovsky, N. (2005) Immunoinformatics and its relevance to understanding human immune disease Exp Rev Clin Immunol (1), pp. 145-157.
-
(2005)
Exp Rev Clin Immunol
, Issue.1
, pp. 145-157
-
-
Brusic, V.1
Petrovsky, N.2
-
4
-
-
33646509024
-
Mathematical models in physiology
-
Gavaghan, D and Garny, A and Maini, PK and Kohl, P. (2006) Mathematical models in physiology Philos Transact A Math Phys Eng Sci, 364, pp. 1099-1106.
-
(2006)
Philos Transact A Math Phys Eng Sci
, vol.364
, pp. 1099-1106
-
-
Gavaghan, D.1
Garny, A.2
Maini, P.K.3
Kohl, P.4
-
5
-
-
33845689498
-
Mathematical modelling of the immune system
-
In natural computing series Springer
-
Motta, S and Brusic, V.(2004) Mathematical modelling of the immune system. In Modelling in molecular biology, natural computing series. (pp. 193-218). Springer.
-
(2004)
Modelling in Molecular Biology
, pp. 193-218
-
-
Motta, S.1
Brusic, V.2
-
6
-
-
0034697342
-
Molecular immunology databases and data repositories
-
Brusic, V and Zeleznikow, J and Petrovsky, N. (2000) Molecular immunology databases and data repositories J Immunol Methods, 238, pp. 17-28.
-
(2000)
J Immunol Methods
, vol.238
, pp. 17-28
-
-
Brusic, V.1
Zeleznikow, J.2
Petrovsky, N.3
-
7
-
-
33845711540
-
IMGT, the international ImMunoGeneTics information system: A standardized approach for immunogenetics and immunoinformatics
-
Lefranc, MP. (2005) IMGT, the international ImMunoGeneTics information system: A standardized approach for immunogenetics and immunoinformatics Immunome Res, 1, pp. 3.
-
(2005)
Immunome Res
, vol.1
, pp. 3
-
-
Lefranc, M.P.1
-
9
-
-
33748126338
-
Discovery of cancer vaccination protocols with a genetic algorithm driving an agent based simulator
-
Lollini, PL and Motta, S and Pappalardo, F. (2006) Discovery of cancer vaccination protocols with a genetic algorithm driving an agent based simulator BMC Bioinformatics, 7, pp. 352.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 352
-
-
Lollini, P.L.1
Motta, S.2
Pappalardo, F.3
-
10
-
-
33646068775
-
Information management for the study of allergies
-
Brusic, V. (2006) Information management for the study of allergies Inflamm Allergy Drug Targets, 5, pp. 35-42.
-
(2006)
Inflamm Allergy Drug Targets
, vol.5
, pp. 35-42
-
-
Brusic, V.1
-
11
-
-
33746699565
-
The autoimmune disease database: A dynamically compiled literature-derived database
-
Karopka, T and Fluck, J and Mevissen, HT and Glass, A. (2006) The autoimmune disease database: A dynamically compiled literature-derived database BMC Bioinformatics, 7, pp. 325.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 325
-
-
Karopka, T.1
Fluck, J.2
Mevissen, H.T.3
Glass, A.4
-
12
-
-
0036383410
-
Autoimmunity to CD38 and GAD in type I and type II diabetes: CD38 and HLA genotypes and clinical phenotypes
-
Antonelli, A and Tuomi, T and Nannipieri, M and Fallahi, P and Nesti, C and Okamoto, H and Groop, L and Ferrannini, E. (2002) Autoimmunity to CD38 and GAD in type I and type II diabetes: CD38 and HLA genotypes and clinical phenotypes Diabetologia (5), pp. 1298-1306.
-
(2002)
Diabetologia
, Issue.5
, pp. 1298-1306
-
-
Antonelli, A.1
Tuomi, T.2
Nannipieri, M.3
Fallahi, P.4
Nesti, C.5
Okamoto, H.6
Groop, L.7
Ferrannini, E.8
-
13
-
-
33646848945
-
Interferon alpha and its contribution to autoimmunity
-
Selmi, C and Lleo, A and Zuin, M and Podda, M and Rossaro, L and Gershwin, ME. (2006) Interferon alpha and its contribution to autoimmunity Curr Opin Investig Drugs, 7, pp. 451-456.
-
(2006)
Curr Opin Investig Drugs
, vol.7
, pp. 451-456
-
-
Selmi, C.1
Lleo, A.2
Zuin, M.3
Podda, M.4
Rossaro, L.5
Gershwin, M.E.6
-
14
-
-
14644426631
-
Systematic reviews of epidemiology in diabetes: Finding the evidence
-
Royle, P and Bain, L and Waugh, N. (2005) Systematic reviews of epidemiology in diabetes: Finding the evidence BMC Med Res Methodol (5), pp. 2.
-
(2005)
BMC Med Res Methodol
, Issue.5
, pp. 2
-
-
Royle, P.1
Bain, L.2
Waugh, N.3
-
15
-
-
33749013001
-
Implications of small effect sizes of individual genetic variants on the design and interpretation of genetic association studies of complex diseases
-
(in press)
-
Ioannidis, JP and Trikalinos, TA and Khoury, MJ. (2006) Implications of small effect sizes of individual genetic variants on the design and interpretation of genetic association studies of complex diseases Am J Epidemiol. (in press)
-
(2006)
Am J Epidemiol
-
-
Ioannidis, J.P.1
Trikalinos, T.A.2
Khoury, M.J.3
-
16
-
-
10444231359
-
Clinical characteristics of African Americans vs. Caucasian Americans with multiple sclerosis
-
Cree, BA and Khan, O and Bourdette, D and Goodin, DS and Cohen, JA and Marrie, RA and Glidden, D and Weinstock-Guttman, B and Reich, D and Patterson, N and Haines, JL and Pericak-Vance, M and DeLoa, C and Oksenberg, JR and Hauser, SL. (2004) Clinical characteristics of African Americans vs. Caucasian Americans with multiple sclerosis Neurology, 63, pp. 2039-2045.
-
(2004)
Neurology
, vol.63
, pp. 2039-2045
-
-
Cree, B.A.1
Khan, O.2
Bourdette, D.3
Goodin, D.S.4
Cohen, J.A.5
Marrie, R.A.6
Glidden, D.7
Weinstock-Guttman, B.8
Reich, D.9
Patterson, N.10
Haines, J.L.11
Pericak-Vance, M.12
DeLoa, C.13
Oksenberg, J.R.14
Hauser, S.L.15
-
17
-
-
33646369138
-
Autoimmunity in the era of genomics and proteomics
-
Hershko, AY and Naparstek, Y. (2006) Autoimmunity in the era of genomics and proteomics Autoimmun Rev, 5, pp. 230-233.
-
(2006)
Autoimmun Rev
, vol.5
, pp. 230-233
-
-
Hershko, A.Y.1
Naparstek, Y.2
-
18
-
-
33644693375
-
Most nuclear systemic autoantigens are extremely disordered proteins: Implications for the etiology of systemic autoimmunity
-
Carl, PL and Temple, BR and Cohen, PL. (2005) Most nuclear systemic autoantigens are extremely disordered proteins: Implications for the etiology of systemic autoimmunity Arthritis Res Ther (7), pp. R1360-R1374.
-
(2005)
Arthritis Res Ther
, Issue.7
, pp. 1360-1374
-
-
Carl, P.L.1
Temple, B.R.2
Cohen, P.L.3
-
19
-
-
17844383520
-
The role of infections in the pathogenesis of autoimmune diseases
-
Samarkos, M and Vaiopoulos, G. (2005) The role of infections in the pathogenesis of autoimmune diseases Curr Drug Targets Inflamm Allergy (4), pp. 99-103.
-
(2005)
Curr Drug Targets Inflamm Allergy
, Issue.4
, pp. 99-103
-
-
Samarkos, M.1
Vaiopoulos, G.2
-
20
-
-
13444266370
-
-
Online Mendelian inheritance in man (OMIM), a knowledgebase of human genes and genetic disorders
-
Hamosh, A and Scott, AF and Amberger, JS and Bocchini, CA and McKusick, VA. (2005) Nucleic Acids Res, 33, pp. D514-D517. Online Mendelian inheritance in man (OMIM), a knowledgebase of human genes and genetic disorders
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Hamosh, A.1
Scott, A.F.2
Amberger, J.S.3
Bocchini, C.A.4
McKusick, V.A.5
-
21
-
-
33644875299
-
-
Benson, DA and Karsch-Mizrachi, I and Lipman, DJ and Ostell, J and Wheeler, DL. (2006) GenBank Nucleic Acids Res, 34, pp. D16-D20.
-
(2006)
GenBank Nucleic Acids Res
, vol.34
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Wheeler, D.L.5
-
22
-
-
33644873213
-
The Universal Protein Resource (UniProt): An expanding universe of protein information
-
Wu, CH and Apweiler, R and Bairoch, A and Natale, DA and Barker, WC and Boeckmann, B and Ferro, S and Gasteiger, E and Huang, H and Lopez, R and Magrane, M and Martin, MJ and Mazumder, R and O'Donovan, C and Redaschi, N and Suzek, B. (2006) The Universal Protein Resource (UniProt): An expanding universe of protein information Nucleic Acids Res, 34, pp. D187-D191.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 187-191
-
-
Wu, C.H.1
Apweiler, R.2
Bairoch, A.3
Natale, D.A.4
Barker, W.C.5
Boeckmann, B.6
Ferro, S.7
Gasteiger, E.8
Huang, H.9
Lopez, R.10
Magrane, M.11
Martin, M.J.12
Mazumder, R.13
O'Donovan, C.14
Redaschi, N.15
Suzek, B.16
-
23
-
-
33644873706
-
The RCSBPDB information portal for structural genomics
-
Kouranov, A and Xie, L and de la Cruz, J and Chen, L and Westbrook, J and Bourne, PE and Berman, HM. (2006) The RCSBPDB information portal for structural genomics Nucleic Acids Res, 34, pp. D302-D305.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Kouranov, A.1
Xie, L.2
de la Cruz, J.3
Chen, L.4
Westbrook, J.5
Bourne, P.E.6
Berman, H.M.7
-
24
-
-
33744940243
-
MPID-T: Database for sequence-structure-function information on T-cell receptor/peptide/MHC interactions
-
Tong, JC and Kong, L and Tan, TW and Ranganathan, S. (2006) MPID-T: Database for sequence-structure-function information on T-cell receptor/ peptide/MHC interactions Appl Bioinformatics, 5, pp. 111-114.
-
(2006)
Appl Bioinformatics
, vol.5
, pp. 111-114
-
-
Tong, J.C.1
Kong, L.2
Tan, T.W.3
Ranganathan, S.4
-
25
-
-
33646181088
-
How TCRs bind MHCs, peptides, and coreceptors
-
Rudolph, MG and Stanfield, RL and Wilson, IA. (2006) How TCRs bind MHCs, peptides, and coreceptors Annu Rev Immunol, 24, pp. 419-466.
-
(2006)
Annu Rev Immunol
, vol.24
, pp. 419-466
-
-
Rudolph, M.G.1
Stanfield, R.L.2
Wilson, I.A.3
-
26
-
-
13444254250
-
T1DBase, a community web-based resource for type 1 diabetes research
-
Smink, LJ and Helton, EM and Healy, BC and Cavnor, CC and Lam, AC and Flamez, D and Burren, OS and Wang, Y and Dolman, GE and Burdick, DB and Everett, VH and Glusman, G and Laneri, D and Rowen, L and Schuilenburg, H and Walker, NM and Mychaleckyj, J and Wicker, LS and Eizirik, DL and Todd, JA and Goodman, N. (2005) T1DBase, a community web-based resource for type 1 diabetes research Nucleic Acids Res, 33, pp. D544-D549.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Smink, L.J.1
Helton, E.M.2
Healy, B.C.3
Cavnor, C.C.4
Lam, A.C.5
Flamez, D.6
Burren, O.S.7
Wang, Y.8
Dolman, G.E.9
Burdick, D.B.10
Everett, V.H.11
Glusman, G.12
Laneri, D.13
Rowen, L.14
Schuilenburg, H.15
Walker, N.M.16
Mychaleckyj, J.17
Wicker, L.S.18
Eizirik, D.L.19
Todd, J.A.20
Goodman, N.21
more..
-
27
-
-
0036307240
-
Functional genomics of the endocrine pancreas: The pancreas clone set and PancChip, new resources for diabetes research
-
Scearce, LM and Brestelli, JE and McWeeney, SK and Lee, CS and Mazzarelli, J and Pinney, DF and Pizarro, A and Stoeckert, CJ, Jr and Clifton, SW and Permutt, MA and Brown, J and Melton, DA and Kaestner, KH. (2002) Functional genomics of the endocrine pancreas: The pancreas clone set and PancChip, new resources for diabetes research Diabetes, 51, pp. 1997-2004.
-
(2002)
Diabetes
, vol.51
, pp. 1997-2004
-
-
Scearce, L.M.1
Brestelli, J.E.2
McWeeney, S.K.3
Lee, C.S.4
Mazzarelli, J.5
Pinney, D.F.6
Pizarro, A.7
Stoeckert Jr., C.J.8
Clifton, S.W.9
Permutt, M.A.10
Brown, J.11
Melton, D.A.12
Kaestner, K.H.13
-
28
-
-
33746985588
-
Curation of complex, context-dependent immunological data
-
Vita, R and Vaughan, K and Zarebski, L and Salimi, N and Fleri, W and Grey, H and Sathiamurthy, M and Mokili, J and Bui, HH and Bourne, PE and Ponomarenko, J and de Castro, R, Jr and Chan, RK and Sidney, J and Wilson, SS and Stewart, S and Way, S and Peters, B and Sette, A. (2006) Curation of complex, context-dependent immunological data BMC Bioinformatics, 7, pp. 341.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 341
-
-
Vita, R.1
Vaughan, K.2
Zarebski, L.3
Salimi, N.4
Fleri, W.5
Grey, H.6
Sathiamurthy, M.7
Mokili, J.8
Bui, H.H.9
Bourne, P.E.10
Ponomarenko, J.11
de Castro Jr., R.12
Chan, R.K.13
Sidney, J.14
Wilson, S.S.15
Stewart, S.16
Way, S.17
Peters, B.18
Sette, A.19
-
29
-
-
0037246882
-
IMGT/HLA MGT/MHC: Sequence databases for the study of the major histocompatibility complex
-
Robinson, J and Waller, MJ and Parham, P and de Groot, N and Bontrop, R and Kennedy, LJ and Stoehr, P and Marsh, SG. (2003) IMGT/HLA MGT/MHC: Sequence databases for the study of the major histocompatibility complex Nucleic Acids Res, 31, pp. 311-314.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 311-314
-
-
Robinson, J.1
Waller, M.J.2
Parham, P.3
de Groot, N.4
Bontrop, R.5
Kennedy, L.J.6
Stoehr, P.7
Marsh, S.G.8
-
30
-
-
33644874839
-
IMGT/LIGM-DB, the IMGT comprehensive database of immunoglobulin and T cell receptor nucleotide sequences
-
Giudicelli, V and Duroux, P and Ginestoux, C and Folch, G and Jabado-Michaloud, J and Chaume, D and Lefranc, MP. (2006) IMGT/LIGM-DB, the IMGT comprehensive database of immunoglobulin and T cell receptor nucleotide sequences Nucleic Acids Res, 34, pp. D781-D784.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 781-784
-
-
Giudicelli, V.1
Duroux, P.2
Ginestoux, C.3
Folch, G.4
Jabado-Michaloud, J.5
Chaume, D.6
Lefranc, M.P.7
-
31
-
-
14744299624
-
Single nucleotide polymorphisms as a prerequisite for autoantigens
-
Stadler, MB and Arnold, D and Frieden, S and Luginbuhl, S and Stadler, BM. (2005) Single nucleotide polymorphisms as a prerequisite for autoantigens Eur J Immunol (35), pp. 371-378.
-
(2005)
Eur J Immunol
, Issue.35
, pp. 371-378
-
-
Stadler, M.B.1
Arnold, D.2
Frieden, S.3
Luginbuhl, S.4
Stadler, B.M.5
-
32
-
-
33645059436
-
Characterization of human gene encoding SLA/LP autoantigen and its conserved homologs in mouse, fish, fly, and worm
-
Wang, CX and Teufel, A and Cheruti, U and Grotzinger, J and Galle, PR and Lohse, AW and Herkel, J. (2006) Characterization of human gene encoding SLA/LP autoantigen and its conserved homologs in mouse, fish, fly, and worm World J Gastroenterol (12), pp. 902-907.
-
(2006)
World J Gastroenterol
, Issue.12
, pp. 902-907
-
-
Wang, C.X.1
Teufel, A.2
Cheruti, U.3
Grotzinger, J.4
Galle, P.R.5
Lohse, A.W.6
Herkel, J.7
-
33
-
-
9644254186
-
Increased noncanonical splicing of autoantigen transcripts provides the structural basis for expression of untolerized epitopes
-
Ng, B and Yang, F and Huston, DP and Yan, Y and Yang, Y and Xiong, Z and Peterson, LE and Wang, H and Yang, XF. (2004) Increased noncanonical splicing of autoantigen transcripts provides the structural basis for expression of untolerized epitopes J Allergy Clin Immunol (114), pp. 1463-1470.
-
(2004)
J Allergy Clin Immunol
, Issue.114
, pp. 1463-1470
-
-
Ng, B.1
Yang, F.2
Huston, D.P.3
Yan, Y.4
Yang, Y.5
Xiong, Z.6
Peterson, L.E.7
Wang, H.8
Yang, X.F.9
-
34
-
-
33750098860
-
Model of stimulation-responsive splicing and strategies in identification of immunogenic isoforms of tumor antigens and autoantigens
-
(in press)
-
Yang, F and Chen, IH and Xiong, Z and Yan, Y and Wang, H and Yang, XF. (2006) Model of stimulation-responsive splicing and strategies in identification of immunogenic isoforms of tumor antigens and autoantigens Clin Immunol. (in press)
-
(2006)
Clin Immunol
-
-
Yang, F.1
Chen, I.H.2
Xiong, Z.3
Yan, Y.4
Wang, H.5
Yang, X.F.6
-
35
-
-
17644385528
-
Molecular mimicry may contribute to pathogenesis of ulcerative colitis
-
Kovvali, G and Das, KM. (2005) Molecular mimicry may contribute to pathogenesis of ulcerative colitis FEBS Lett (579), pp. 2261-2266.
-
(2005)
FEBS Lett
, Issue.579
, pp. 2261-2266
-
-
Kovvali, G.1
Das, K.M.2
-
36
-
-
0036307896
-
Human genome search in celiac disease: Mutated gliadin T-cell-like epitope in two human proteins promotes T-cell activation
-
Kumar, R and Eastwood, AL and Brown, ML and Laurie, GW. (2002) Human genome search in celiac disease: Mutated gliadin T-cell-like epitope in two human proteins promotes T-cell activation J Mol Biol (319), pp. 593-602.
-
(2002)
J Mol Biol
, Issue.319
, pp. 593-602
-
-
Kumar, R.1
Eastwood, A.L.2
Brown, M.L.3
Laurie, G.W.4
-
37
-
-
25444458025
-
Role of Fc gamma receptor IIb polymorphism in the genetic background of systemic lupus erythematosus: Insights from Asia
-
Tsuchiya, N and Kyogoku, C. (2005) Role of Fc gamma receptor IIb polymorphism in the genetic background of systemic lupus erythematosus: Insights from Asia Autoimmunity, 38, pp. 347-352.
-
(2005)
Autoimmunity
, vol.38
, pp. 347-352
-
-
Tsuchiya, N.1
Kyogoku, C.2
-
38
-
-
23944489940
-
HLA genomics in the third millennium
-
Trowsdale, J. (2005) HLA genomics in the third millennium Curr Opin Immunol, 17, pp. 498-504.
-
(2005)
Curr Opin Immunol
, vol.17
, pp. 498-504
-
-
Trowsdale, J.1
-
39
-
-
33646077198
-
Polymorphism discovery and association analyses of the interferon genes in type 1 diabetes
-
Morris, GA and Lowe, CE and Cooper, JD and Payne, F and Vella, A and Godfrey, L and Hulme, JS and Walker, NM and Healy, BC and Lam, AC and Lyons, PA and Todd, JA. (2006) Polymorphism discovery and association analyses of the interferon genes in type 1 diabetes BMC Genet (7), pp. 12.
-
(2006)
BMC Genet
, Issue.7
, pp. 12
-
-
Morris, G.A.1
Lowe, C.E.2
Cooper, J.D.3
Payne, F.4
Vella, A.5
Godfrey, L.6
Hulme, J.S.7
Walker, N.M.8
Healy, B.C.9
Lam, A.C.10
Lyons, P.A.11
Todd, J.A.12
-
40
-
-
33744513929
-
Standardization of microarray and pharmacogenomics data
-
Husser, CS and Buchhalter, JR and Raffo, OS and Shabo, A and Brown, SH and Lee, KE and Elkin, PL. (2006) Standardization of microarray and pharmacogenomics data Methods Mol Biol, 316, pp. 111-157.
-
(2006)
Methods Mol Biol
, vol.316
, pp. 111-157
-
-
Husser, C.S.1
Buchhalter, J.R.2
Raffo, O.S.3
Shabo, A.4
Brown, S.H.5
Lee, K.E.6
Elkin, P.L.7
-
41
-
-
33744516136
-
Ontology-driven approaches to analyzing data in functional genomics
-
Azuaje, F and Al-Shahrour, F and Dopazo, J. (2006) Ontology-driven approaches to analyzing data in functional genomics Methods Mol Biol, 316, pp. 67-86.
-
(2006)
Methods Mol Biol
, vol.316
, pp. 67-86
-
-
Azuaje, F.1
Al-Shahrour, F.2
Dopazo, J.3
-
42
-
-
33744509689
-
Basic microarray analysis: Strategies for successful experiments
-
Ness, SA. (2006) Basic microarray analysis: Strategies for successful experiments Methods Mol Biol (316), pp. 13-33.
-
(2006)
Methods Mol Biol
, Issue.316
, pp. 13-33
-
-
Ness, S.A.1
-
43
-
-
25844439570
-
Disease gene discovery through integrative genomics
-
Giallourakis, C and Henson, C and Reich, M and Xie, X and Motha, VK. (2005) Disease gene discovery through integrative genomics Annu Rev Genomics Hum Genet, pp. 381-406.
-
(2005)
Annu Rev Genomics Hum Genet
, pp. 381-406
-
-
Giallourakis, C.1
Henson, C.2
Reich, M.3
Xie, X.4
Motha, V.K.5
-
44
-
-
26444608611
-
Discovering statistically significant pathways in expression profiling studies
-
Tian, L and Greenberg, SA and Kong, SW and Altschuler, J and Kohane, IS and Park, PJ. (2005) Discovering statistically significant pathways in expression profiling studies Proc Natl Acad Sci USA (102), pp. 13544-13549.
-
(2005)
Proc Natl Acad Sci USA
, Issue.102
, pp. 13544-13549
-
-
Tian, L.1
Greenberg, S.A.2
Kong, S.W.3
Altschuler, J.4
Kohane, I.S.5
Park, P.J.6
-
45
-
-
23744516651
-
Functional genomics in early autoimmunity
-
Melanitou, E. (2005) Functional genomics in early autoimmunity Ann N Y Acad Sci (1050), pp. 64-72.
-
(2005)
Ann N Y Acad Sci
, Issue.1050
, pp. 64-72
-
-
Melanitou, E.1
-
46
-
-
25444486700
-
Rheumatoid arthritis, a complex multifactorial disease: On the way toward individualized medicine
-
Glocker, MO and Guthke, R and Kekow, J and Thiesen, HJ. (2006) Rheumatoid arthritis, a complex multifactorial disease: On the way toward individualized medicine Med Res Rev, 26, pp. 63-87.
-
(2006)
Med Res Rev
, vol.26
, pp. 63-87
-
-
Glocker, M.O.1
Guthke, R.2
Kekow, J.3
Thiesen, H.J.4
-
47
-
-
0242473083
-
Application of genomics and proteomics in type 1 diabetes pathogenesis research
-
Sparre, T and Bergholdt, R and Nerup, J and Pociot, F. (2003) Application of genomics and proteomics in type 1 diabetes pathogenesis research Expert Rev Mol Diagn (3), pp. 743-757.
-
(2003)
Expert Rev Mol Diagn
, Issue.3
, pp. 743-757
-
-
Sparre, T.1
Bergholdt, R.2
Nerup, J.3
Pociot, F.4
-
48
-
-
28444460187
-
Multiple sclerosis genetics: Leaving no stone unturned
-
Oksenberg, JR and Barcellos, LF. (2005) Multiple sclerosis genetics: Leaving no stone unturned Genes Immun, 6(5), pp. 375-387. Aug
-
(2005)
Genes Immun
, vol.6
, Issue.5
, pp. 375-387
-
-
Oksenberg, J.R.1
Barcellos, L.F.2
-
49
-
-
33646203015
-
Multiplexed protein array platforms for analysis of autoimmune diseases
-
Balboni, I and Chan, SM and Kattah, M and Tenenbaum, JD and Butte, AJ and Utz, PJ. (2006) Multiplexed protein array platforms for analysis of autoimmune diseases Annu Rev Immunol, 24, pp. 391-418.
-
(2006)
Annu Rev Immunol
, vol.24
, pp. 391-418
-
-
Balboni, I.1
Chan, S.M.2
Kattah, M.3
Tenenbaum, J.D.4
Butte, A.J.5
Utz, P.J.6
-
50
-
-
31344448066
-
Guidelines for the next 10 years of proteomics
-
Wilkins, MR and Appel, RD and Van Eyk, JE and Chung, MC and Gorg, A and Hecker, M and Huber, LA and Langen, H and Link, AJ and Paik, YK and Patterson, SD and Pennington, SR and Rabilloud, T and Simpson, RJ and Weiss, W and Dunn, MJ. (2006) Guidelines for the next 10 years of proteomics Proteomics, 6, pp. 4-8.
-
(2006)
Proteomics
, vol.6
, pp. 4-8
-
-
Wilkins, M.R.1
Appel, R.D.2
Van Eyk, J.E.3
Chung, M.C.4
Gorg, A.5
Hecker, M.6
Huber, L.A.7
Langen, H.8
Link, A.J.9
Paik, Y.K.10
Patterson, S.D.11
Pennington, S.R.12
Rabilloud, T.13
Simpson, R.J.14
Weiss, W.15
Dunn, M.J.16
-
51
-
-
33745582911
-
Bioinformatics and data mining in proteomics
-
Haoudi, A and Bensmail, H. (2006) Bioinformatics and data mining in proteomics Expert Rev Proteomics, 3, pp. 333-343.
-
(2006)
Expert Rev Proteomics
, vol.3
, pp. 333-343
-
-
Haoudi, A.1
Bensmail, H.2
-
52
-
-
33745800293
-
Interpreting the protein language using proteomics
-
Jensen, ON. (2006) Interpreting the protein language using proteomics Nat Rev Mol Cell Biol, 7, pp. 391-403.
-
(2006)
Nat Rev Mol Cell Biol
, vol.7
, pp. 391-403
-
-
Jensen, O.N.1
-
54
-
-
3543089294
-
Advances in the development of common interchange standards for proteomic data
-
Orchard, S and Taylor, CF and Hermjakob, H and Zhu, W and Julian, RK, Jr and Apweiler, R. (2004) Advances in the development of common interchange standards for proteomic data Proteomics, 4, pp. 2363-2365.
-
(2004)
Proteomics
, vol.4
, pp. 2363-2365
-
-
Orchard, S.1
Taylor, C.F.2
Hermjakob, H.3
Zhu, W.4
Julian Jr., R.K.5
Apweiler, R.6
-
55
-
-
0043122944
-
ExPASy: The proteomics server for in-depth protein knowledge and analysis
-
Gasteiger, E and Gattiker, A and Hoogland, C and Ivanyi, I and Appel, RD and Bairoch, A. (2003) ExPASy: The proteomics server for in-depth protein knowledge and analysis Nucleic Acids Res, 31, pp. 3784-3788.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3784-3788
-
-
Gasteiger, E.1
Gattiker, A.2
Hoogland, C.3
Ivanyi, I.4
Appel, R.D.5
Bairoch, A.6
-
56
-
-
33748680771
-
PROMPT: A protein mapping and comparison tool
-
Frishman, D and Schmidt, T. (2006) PROMPT: A protein mapping and comparison tool BMC Bioinformatics, 7, pp. 331.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 331
-
-
Frishman, D.1
Schmidt, T.2
-
57
-
-
0042855664
-
Analysis of genomic and proteomic data using advanced literature mining
-
Hu, Y and Hines, LM and Weng, H and Zuo, D and Rivera, M and Richardson, A and LaBaer, J. (2003) Analysis of genomic and proteomic data using advanced literature mining J Proteome Res, 2, pp. 405-412.
-
(2003)
J Proteome Res
, vol.2
, pp. 405-412
-
-
Hu, Y.1
Hines, L.M.2
Weng, H.3
Zuo, D.4
Rivera, M.5
Richardson, A.6
LaBaer, J.7
-
58
-
-
33745850141
-
Lumbar cerebrospinal fluid proteome in multiple sclerosis: Characterization by ultrafiltration, liquid chromatography, and mass spectrometry
-
Noben, JP and Dumont, D and Kwasnikowska, N and Verhaert, P and Somers, V and Hupperts, R and Stinissen, P and Robben, J. (2006) Lumbar cerebrospinal fluid proteome in multiple sclerosis: Characterization by ultrafiltration, liquid chromatography, and mass spectrometry J Proteome Res, 5, pp. 1647-1657.
-
(2006)
J Proteome Res
, vol.5
, pp. 1647-1657
-
-
Noben, J.P.1
Dumont, D.2
Kwasnikowska, N.3
Verhaert, P.4
Somers, V.5
Hupperts, R.6
Stinissen, P.7
Robben, J.8
-
59
-
-
31044440224
-
Identification of autoantibody clusters that best predict lupus disease activity using glomerular proteome arrays
-
Li, QZ and Xie, C and Wu, T and Mackay, M and Aranow, C and Putterman, C and Mohan, C. (2005) Identification of autoantibody clusters that best predict lupus disease activity using glomerular proteome arrays J Clin Invest, 115, pp. 3428-3439.
-
(2005)
J Clin Invest
, vol.115
, pp. 3428-3439
-
-
Li, Q.Z.1
Xie, C.2
Wu, T.3
Mackay, M.4
Aranow, C.5
Putterman, C.6
Mohan, C.7
-
60
-
-
33644669952
-
New data analysis and mining approaches identify unique proteome and transcriptome markers of susceptibility to autoimmune diabetes
-
Gerling, IC and Singh, S and Lenchik, NI and Marshall, DR and Wu, J. (2006) New data analysis and mining approaches identify unique proteome and transcriptome markers of susceptibility to autoimmune diabetes Mol Cell Proteomics, 5, pp. 293-305.
-
(2006)
Mol Cell Proteomics
, vol.5
, pp. 293-305
-
-
Gerling, I.C.1
Singh, S.2
Lenchik, N.I.3
Marshall, D.R.4
Wu, J.5
-
61
-
-
25144514840
-
Proteomics in rheumatology: A new direction for old diseases
-
Ali, M and Manolios, N. (2005) Proteomics in rheumatology: A new direction for old diseases Semin Arthritis Rheum, 35, pp. 67-76.
-
(2005)
Semin Arthritis Rheum
, vol.35
, pp. 67-76
-
-
Ali, M.1
Manolios, N.2
-
62
-
-
30544439504
-
Creation and implications of a phenome-genome network
-
Butte, AJ and Kohane, IS. (2006) Creation and implications of a phenome-genome network Nat Biotechnol, 24, pp. 55-62.
-
(2006)
Nat Biotechnol
, vol.24
, pp. 55-62
-
-
Butte, A.J.1
Kohane, I.S.2
-
63
-
-
0037336350
-
Integration from proteins to organs: The Physiome Project
-
Hunter, PJ and Borg, TK. (2003) Integration from proteins to organs: The Physiome Project Nat Rev Mol Cell Biol, 4, pp. 237-243.
-
(2003)
Project Nat Rev Mol Cell Biol
, vol.4
, pp. 237-243
-
-
Hunter, P.J.1
Borg, T.K.2
-
64
-
-
33044506498
-
Modelling biological complexity: A physical scientist's perspective
-
Coveney, PV and Fowler, PW. (2005) Modelling biological complexity: A physical scientist's perspective J R Soc Interface, 2, pp. 267-280.
-
(2005)
J R Soc Interface
, vol.2
, pp. 267-280
-
-
Coveney, P.V.1
Fowler, P.W.2
-
65
-
-
20444505232
-
An array of possibilities for the study of autoimmunity
-
Fathman, CG and Soares, L and Chan, SM and Utz, PJ. (2005) An array of possibilities for the study of autoimmunity Nature, 435, pp. 605-611.
-
(2005)
Nature
, vol.435
, pp. 605-611
-
-
Fathman, C.G.1
Soares, L.2
Chan, S.M.3
Utz, P.J.4
-
66
-
-
7944223046
-
Computational methods for prediction of T-cell epitopes - A framework for modelling, testing, and applications
-
Brusic, V and Bajic, VB and Petrovsky, N. (2004) Computational methods for prediction of T-cell epitopes - a framework for modelling, testing, and applications Methods, 34, pp. 436-443.
-
(2004)
Methods
, vol.34
, pp. 436-443
-
-
Brusic, V.1
Bajic, V.B.2
Petrovsky, N.3
-
67
-
-
20544463394
-
Antigen processing is predictable: From genes to T cell epitopes
-
Stevanovic, S. (2005) Antigen processing is predictable: From genes to T cell epitopes Transpl Immunol, 14, pp. 171-174.
-
(2005)
Transpl Immunol
, vol.14
, pp. 171-174
-
-
Stevanovic, S.1
-
68
-
-
33645356185
-
Immunomics: Discovering new targets for vaccines and therapeutics
-
De Groot, AS. (2006) Immunomics: Discovering new targets for vaccines and therapeutics Drug Discov Today, 11, pp. 203-209.
-
(2006)
Drug Discov Today
, vol.11
, pp. 203-209
-
-
De Groot, A.S.1
-
69
-
-
0033388725
-
SYFPEITHI: Database for MHC ligands and peptide motifs
-
Rammensee, H and Bachmann, J and Emmerich, NP and Bachor, OA and Stevanovic, S. (1999) SYFPEITHI: Database for MHC ligands and peptide motifs Immunogenetics, 50, pp. 213-219.
-
(1999)
Immunogenetics
, vol.50
, pp. 213-219
-
-
Rammensee, H.1
Bachmann, J.2
Emmerich, N.P.3
Bachor, O.A.4
Stevanovic, S.5
-
70
-
-
5444249860
-
Enhancement to the RANKPEP resource for the prediction of peptide binding to MHC molecules using profiles
-
Reche, PA and Glutting, JP and Zhang, H and Reinherz, EL. (2004) Enhancement to the RANKPEP resource for the prediction of peptide binding to MHC molecules using profiles Immunogenetics, 56, pp. 405-419.
-
(2004)
Immunogenetics
, vol.56
, pp. 405-419
-
-
Reche, P.A.1
Glutting, J.P.2
Zhang, H.3
Reinherz, E.L.4
-
71
-
-
2342561929
-
Definition of supertypes for HLA molecules using clustering of specificity matrices
-
Lund, O and Nielsen, M and Kesmir, C and Petersen, AG and Lundegaard, C and Worning, P and Sylvester-Hvid, C and Lamberth, K and Roder, G and Justesen, S and Buus, S and Brunak, S. (2004) Definition of supertypes for HLA molecules using clustering of specificity matrices Immunogenetics, 55, pp. 797-810.
-
(2004)
Immunogenetics
, vol.55
, pp. 797-810
-
-
Lund, O.1
Nielsen, M.2
Kesmir, C.3
Petersen, A.G.4
Lundegaard, C.5
Worning, P.6
Sylvester-Hvid, C.7
Lamberth, K.8
Roder, G.9
Justesen, S.10
Buus, S.11
Brunak, S.12
-
72
-
-
23144455463
-
MULTIPRED: A computational system for prediction of promiscuous HLA binding peptides
-
Zhang, GL and Khan, AM and Srinivasan, KN and August, JT and Brusic, V. (2005) MULTIPRED: A computational system for prediction of promiscuous HLA binding peptides Nucleic Acids Res, 33, pp. W172-W179.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 172-179
-
-
Zhang, G.L.1
Khan, A.M.2
Srinivasan, K.N.3
August, J.T.4
Brusic, V.5
-
73
-
-
33845689907
-
PREDNOD, a prediction server for peptide binding to the H-2g7 haplotype of the non-obese diabetic mouse
-
Rajapakse, M and Zhang, GL and Srinivasan, KN and Schmidt, B and Petrovsky, N and Brusic, V. (2006) PREDNOD, a prediction server for peptide binding to the H-2g7 haplotype of the non-obese diabetic mouse Autoimmunity, 40, pp. 645-650.
-
(2006)
Autoimmunity
, vol.40
, pp. 645-650
-
-
Rajapakse, M.1
Zhang, G.L.2
Srinivasan, K.N.3
Schmidt, B.4
Petrovsky, N.5
Brusic, V.6
-
74
-
-
0035836680
-
Localization of CD4+T cell epitope hotspots to exposed strands of HIV envelope glycoprotein suggests structural influences on antigen processing
-
Surman, S and Lockey, TD and Slobod, KS and Jones, B and Riberdy, JM and White, SW and Doherty, PC and Hurwitz, JL. (2001) Localization of CD4+T cell epitope hotspots to exposed strands of HIV envelope glycoprotein suggests structural influences on antigen processing Proc Natl Acad Sci USA, 98, pp. 4587-4592.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 4587-4592
-
-
Surman, S.1
Lockey, T.D.2
Slobod, K.S.3
Jones, B.4
Riberdy, J.M.5
White, S.W.6
Doherty, P.C.7
Hurwitz, J.L.8
-
75
-
-
4544297611
-
Prediction of class I T-cell epitopes: Evidence of presence of immunological hot spots inside antigens
-
Srinivasan, KN and Zhang, GL and Khan, AM and August, JT and Brusic, V. (2004) Prediction of class I T-cell epitopes: Evidence of presence of immunological hot spots inside antigens Bioinformatics, 20, pp. I297-I302.
-
(2004)
Bioinformatics
, vol.20
, pp. 297-302
-
-
Srinivasan, K.N.1
Zhang, G.L.2
Khan, A.M.3
August, J.T.4
Brusic, V.5
-
76
-
-
20844434026
-
Modeling the MHC class I pathway by combining predictions of proteasomal cleavage, TAP transport and MHC class I binding
-
Tenzer, S and Peters, B and Bulik, S and Schoor, O and Lemmel, C and Schatz, MM and Kloetzel, PM and Rammensee, HG and Schild, H and Holzhutter, HG. (2005) Modeling the MHC class I pathway by combining predictions of proteasomal cleavage, TAP transport and MHC class I binding Cell Mol Life Sci, 62, pp. 1025-1037.
-
(2005)
Cell Mol Life Sci
, vol.62
, pp. 1025-1037
-
-
Tenzer, S.1
Peters, B.2
Bulik, S.3
Schoor, O.4
Lemmel, C.5
Schatz, M.M.6
Kloetzel, P.M.7
Rammensee, H.G.8
Schild, H.9
Holzhutter, H.G.10
-
77
-
-
33645472169
-
EpiJen: A server for multistep T cell epitope prediction
-
Doytchinova, IA and Guan, P and Flower, DR. (2006) EpiJen: A server for multistep T cell epitope prediction BMC Bioinformatics, 7, pp. 131.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 131
-
-
Doytchinova, I.A.1
Guan, P.2
Flower, D.R.3
-
78
-
-
33746132748
-
A consensus epitope prediction approach identifies the breadth of murine T(CD8+)-cell responses to vaccinia virus
-
Moutaftsi, M and Peters, B and Pasquetto, V and Tscharke, DC and Sidney, J and Bui, HH and Grey, H and Sette, A. (2006) A consensus epitope prediction approach identifies the breadth of murine T(CD8+)-cell responses to vaccinia virus Nat Biotechnol, 24, pp. 817-819.
-
(2006)
Nat Biotechnol
, vol.24
, pp. 817-819
-
-
Moutaftsi, M.1
Peters, B.2
Pasquetto, V.3
Tscharke, D.C.4
Sidney, J.5
Bui, H.H.6
Grey, H.7
Sette, A.8
-
79
-
-
33646866095
-
Modeling the bound conformation of pemphigus vulgaris-associated peptides to MHC Class II DR and DQ Alleles
-
Tong, JC and Bramson, J and Kanduc, D and Chow, S and Sinha, AA and Ranganathan, S. (2006) Modeling the bound conformation of pemphigus vulgaris-associated peptides to MHC Class II DR and DQ Alleles Immunome Res, 2, pp. 1.
-
(2006)
Immunome Res
, vol.2
, pp. 1
-
-
Tong, J.C.1
Bramson, J.2
Kanduc, D.3
Chow, S.4
Sinha, A.A.5
Ranganathan, S.6
-
80
-
-
33645307670
-
Direct prediction of T-cell epitopes using support vector machines with novel sequence encoding schemes
-
Huang, L and Dai, Y. (2006) Direct prediction of T-cell epitopes using support vector machines with novel sequence encoding schemes J Bioinform Comput Biol, 4, pp. 93-107.
-
(2006)
J Bioinform Comput Biol
, vol.4
, pp. 93-107
-
-
Huang, L.1
Dai, Y.2
-
81
-
-
33744475837
-
T-cell epitopes of the La/SSB autoantigen: Prediction based on the homology modeling of HLA-DQ2/DQ7 with the insulin-B peptide/HLA-DQ8 complex
-
Kosmopoulou, A and Vlassi, M and Stavrakoudis, A and Sakarellos, C and Sakarellos-Daitsiotis, M. (2006) T-cell epitopes of the La/SSB autoantigen: Prediction based on the homology modeling of HLA-DQ2/DQ7 with the insulin-B peptide/HLA-DQ8 complex J Comput Chem, 27, pp. 1033-1044.
-
(2006)
J Comput Chem
, vol.27
, pp. 1033-1044
-
-
Kosmopoulou, A.1
Vlassi, M.2
Stavrakoudis, A.3
Sakarellos, C.4
Sakarellos-Daitsiotis, M.5
-
82
-
-
4944223135
-
Pathogenic human thyroglobulin peptides in HLA-DR3 transgenic mouse model of autoimmune thyroiditis
-
Flynn, JC and McCormick, DJ and Brusic, V and Wan, Q and Panos, JC and Giraldo, AA and David, CS and Kong, YC. (2004) Pathogenic human thyroglobulin peptides in HLA-DR3 transgenic mouse model of autoimmune thyroiditis Cell Immunol, 229, pp. 79-85.
-
(2004)
Cell Immunol
, vol.229
, pp. 79-85
-
-
Flynn, J.C.1
McCormick, D.J.2
Brusic, V.3
Wan, Q.4
Panos, J.C.5
Giraldo, A.A.6
David, C.S.7
Kong, Y.C.8
-
83
-
-
21844457408
-
Tolerogenic immune responses to novel T-cell epitopes from heat-shock protein 60 in juvenile idiopathic arthritis
-
Kamphuis, S and Kuis, W and de Jager, W and Teklenburg, G and Massa, M and Gordon, G and Boerhof, M and Rijkers, GT and Uiterwaal, CS and Otten, HG and Sette, A and Albani, S and Prakken, BJ. (2005) Tolerogenic immune responses to novel T-cell epitopes from heat-shock protein 60 in juvenile idiopathic arthritis Lancet, 366, pp. 50-56.
-
(2005)
Lancet
, vol.366
, pp. 50-56
-
-
Kamphuis, S.1
Kuis, W.2
de Jager, W.3
Teklenburg, G.4
Massa, M.5
Gordon, G.6
Boerhof, M.7
Rijkers, G.T.8
Uiterwaal, C.S.9
Otten, H.G.10
Sette, A.11
Albani, S.12
Prakken, B.J.13
-
84
-
-
33745488427
-
Evaluation of topoisomerase-1-specific CD8+T-cell response in systemic sclerosis
-
Boin, F and Wigley, FM and Schneck, JP and Oelke, M and Rosen, A. (2005) Evaluation of topoisomerase-1-specific CD8+T-cell response in systemic sclerosis Ann N Y Acad Sci, 1062, pp. 137-145.
-
(2005)
Ann N Y Acad Sci
, vol.1062
, pp. 137-145
-
-
Boin, F.1
Wigley, F.M.2
Schneck, J.P.3
Oelke, M.4
Rosen, A.5
-
85
-
-
24644522745
-
Mitochondrial antigens as targets of cellular and humoral auto-immunity in primary biliary cirrhosis
-
Ichiki, Y and Selmi, C and Shimoda, S and Ishibashi, H and Gordon, SC and Gershwin, ME. (2005) Mitochondrial antigens as targets of cellular and humoral auto-immunity in primary biliary cirrhosis Clin Rev Allergy Immunol, 28, pp. 83-91.
-
(2005)
Clin Rev Allergy Immunol
, vol.28
, pp. 83-91
-
-
Ichiki, Y.1
Selmi, C.2
Shimoda, S.3
Ishibashi, H.4
Gordon, S.C.5
Gershwin, M.E.6
-
86
-
-
33745047369
-
Selection and combination of machine learning classifiers for prediction of linear B-cell epitopes on proteins
-
Sollner, J. (2006) Selection and combination of machine learning classifiers for prediction of linear B-cell epitopes on proteins J Mol Recognit, 19, pp. 209-214.
-
(2006)
J Mol Recognit
, vol.19
, pp. 209-214
-
-
Sollner, J.1
-
87
-
-
25444509811
-
Bcipep: A database of B-cell epitopes
-
Saha, S and Bhasin, M and Raghava, GP. (2005) Bcipep: A database of B-cell epitopes BMC Genomics, 6, pp. 79.
-
(2005)
BMC Genomics
, vol.6
, pp. 79
-
-
Saha, S.1
Bhasin, M.2
Raghava, G.P.3
-
88
-
-
33751104704
-
Improved method for predicting linear B-cell epitopes
-
Larsen, JE and Lund, O and Nielsen, M. (2006) Improved method for predicting linear B-cell epitopes Immunome Res, 2, pp. 2.
-
(2006)
Immunome Res
, vol.2
, pp. 2
-
-
Larsen, J.E.1
Lund, O.2
Nielsen, M.3
-
89
-
-
0032829397
-
Predictive estimation of protein linear epitopes by using the program PEOPLE
-
Alix, A. (1999) Predictive estimation of protein linear epitopes by using the program PEOPLE Vaccine, 18, pp. 311-314.
-
(1999)
Vaccine
, vol.18
, pp. 311-314
-
-
Alix, A.1
-
90
-
-
0037263777
-
BEPITOPE: Predicting the location of continuous epitopes and patterns in proteins
-
Odorico, M and Pellequer, JL. (2003) BEPITOPE: Predicting the location of continuous epitopes and patterns in proteins J Mol Recognit, 16, pp. 20-22.
-
(2003)
J Mol Recognit
, vol.16
, pp. 20-22
-
-
Odorico, M.1
Pellequer, J.L.2
-
91
-
-
11144246404
-
Benchmarking B cell epitope prediction: Underperformance of existing methods
-
Blythe, MJ and Flower, DR. (2005) Benchmarking B cell epitope prediction: Underperformance of existing methods Protein Sci, 14, pp. 246-248.
-
(2005)
Protein Sci
, vol.14
, pp. 246-248
-
-
Blythe, M.J.1
Flower, D.R.2
-
92
-
-
0142195767
-
The mapping and reconstitution of a conformational discontinuous B-cell epitope of HIV-1
-
Enshell-Seijffers, D and Denisov, D and Groisman, B and Smelyanski, L and Meyuhas, R and Gross, G and Denisova, G and Gershoni, JM. (2003) The mapping and reconstitution of a conformational discontinuous B-cell epitope of HIV-1 J Mol Biol, 334, pp. 87-101.
-
(2003)
J Mol Biol
, vol.334
, pp. 87-101
-
-
Enshell-Seijffers, D.1
Denisov, D.2
Groisman, B.3
Smelyanski, L.4
Meyuhas, R.5
Gross, G.6
Denisova, G.7
Gershoni, J.M.8
-
93
-
-
31144436591
-
An in silico method using an epitope motif database for predicting the location of antigenic determinants on proteins in a structural context
-
Batori, V and Friis, EP and Nielsen, H and Roggen, EL. (2006) An in silico method using an epitope motif database for predicting the location of antigenic determinants on proteins in a structural context J Mol Recognit, 19, pp. 21-29.
-
(2006)
J Mol Recognit
, vol.19
, pp. 21-29
-
-
Batori, V.1
Friis, E.P.2
Nielsen, H.3
Roggen, E.L.4
-
94
-
-
29144470376
-
Validation of in silico prediction by in vitro immunoserological results of fine epitope mapping on citrate synthase specific autoantibodies
-
Nyarady, Z and Czompoly, T and Bosze, S and Nagy, G and Petrohai, A and Pal, J and Hudecz, F and Berki, T and Nemeth, P. (2006) Validation of in silico prediction by in vitro immunoserological results of fine epitope mapping on citrate synthase specific autoantibodies Mol Immunol, 43, pp. 830-838.
-
(2006)
Mol Immunol
, vol.43
, pp. 830-838
-
-
Nyarady, Z.1
Czompoly, T.2
Bosze, S.3
Nagy, G.4
Petrohai, A.5
Pal, J.6
Hudecz, F.7
Berki, T.8
Nemeth, P.9
-
95
-
-
18144371672
-
Epitope definition by proteomic similarity analysis: Identification of the linear determinant of the anti-Dsg3 MAb 5H10
-
Lucchese, A and Mittelman, A and Lin, MS and Kanduc, D and Sinha, AA. (2004) Epitope definition by proteomic similarity analysis: Identification of the linear determinant of the anti-Dsg3 MAb 5H10 J Transl Med, 2, pp. 43.
-
(2004)
J Transl Med
, vol.2
, pp. 43
-
-
Lucchese, A.1
Mittelman, A.2
Lin, M.S.3
Kanduc, D.4
Sinha, A.A.5
-
96
-
-
0034914529
-
Identification of antigenic domains on the human sodium-iodide symporter which are recognized by autoantibodies from patients with autoimmune thyroid disease
-
Kemp, EH and Waterman, EA and Ajjan, RA and Smith, KA and Watson, PF and Ludgate, ME and Weetman, AP. (2001) Identification of antigenic domains on the human sodium-iodide symporter which are recognized by autoantibodies from patients with autoimmune thyroid disease Clin Exp Immunol, 124, pp. 377-385.
-
(2001)
Clin Exp Immunol
, vol.124
, pp. 377-385
-
-
Kemp, E.H.1
Waterman, E.A.2
Ajjan, R.A.3
Smith, K.A.4
Watson, P.F.5
Ludgate, M.E.6
Weetman, A.P.7
-
97
-
-
0033215425
-
Human transaldolase and cross-reactive viral epitopes identified by autoantibodies of multiple sclerosis patients
-
Esposito, M and Venkatesh, V and Otvos, L and Weng, Z and Vajda, S and Banki, K and Perl, A. (1999) Human transaldolase and cross-reactive viral epitopes identified by autoantibodies of multiple sclerosis patients J Immunol, 163, pp. 4027-4032.
-
(1999)
J Immunol
, vol.163
, pp. 4027-4032
-
-
Esposito, M.1
Venkatesh, V.2
Otvos, L.3
Weng, Z.4
Vajda, S.5
Banki, K.6
Perl, A.7
-
98
-
-
0037767620
-
Cluster analysis of human autoantibody reactivities in health and in type 1 diabetes mellitus: A bioinformatic approach to immune complexity
-
Quintana, FJ and Getz, G and Hed, G and Domany, E and Cohen, IR. (2003) Cluster analysis of human autoantibody reactivities in health and in type 1 diabetes mellitus: A bioinformatic approach to immune complexity J Autoimmun, 21, pp. 65-75.
-
(2003)
J Autoimmun
, vol.21
, pp. 65-75
-
-
Quintana, F.J.1
Getz, G.2
Hed, G.3
Domany, E.4
Cohen, I.R.5
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