-
1
-
-
0034655640
-
Degradation of ribosomal RNA precursors by the exosome
-
Allmang, C., Mitchell, P., Petfalski, E., and Tollervey, D. 2000. Degradation of ribosomal RNA precursors by the exosome. Nucleic Acids Res. 28: 1684-1691.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 1684-1691
-
-
Allmang, C.1
Mitchell, P.2
Petfalski, E.3
Tollervey, D.4
-
2
-
-
0031746834
-
New unstable variants of green fluorescent protein for studies of transient gene expression in bacteria
-
Andersen, J.B., Sternberg, C., Poulsen, L.K., Bjorn, S.P., Givskov, M., and Molin, S. 1998. New unstable variants of green fluorescent protein for studies of transient gene expression in bacteria. Appl. Environ. Microbiol. 64: 2240-2246.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 2240-2246
-
-
Andersen, J.B.1
Sternberg, C.2
Poulsen, L.K.3
Bjorn, S.P.4
Givskov, M.5
Molin, S.6
-
3
-
-
0021241894
-
Specific interaction between the self-splicing RNA of Tetrahymena and its guanosine substrate: Implications for biological catalysis by RNA
-
Bass, B.L. and Cech, T.R. 1984. Specific interaction between the self-splicing RNA of Tetrahymena and its guanosine substrate: Implications for biological catalysis by RNA. Nature 308: 820-826.
-
(1984)
Nature
, vol.308
, pp. 820-826
-
-
Bass, B.L.1
Cech, T.R.2
-
4
-
-
19344378943
-
Rules of engagement: Co-transcriptional recruitment of pre-mRNA processing factors
-
Bentley, D.L. 2005. Rules of engagement: Co-transcriptional recruitment of pre-mRNA processing factors. Curr. Opin. Cell Biol. 17: 251-256.
-
(2005)
Curr. Opin. Cell Biol.
, vol.17
, pp. 251-256
-
-
Bentley, D.L.1
-
5
-
-
0021099454
-
Fate of an intervening sequence ribonucleic acid: Excision and cyclization of the Tetrahymena ribosomal ribonucleic acid intervening sequence in vivo
-
Brehm, S.L. and Cech, T.R. 1983. Fate of an intervening sequence ribonucleic acid: Excision and cyclization of the Tetrahymena ribosomal ribonucleic acid intervening sequence in vivo. Biochemistry 22: 2390-2397.
-
(1983)
Biochemistry
, vol.22
, pp. 2390-2397
-
-
Brehm, S.L.1
Cech, T.R.2
-
6
-
-
0032991584
-
Influence of specific mutations on the thermal stability of the td group I intron in vitro and on its splicing efficiency in vivo: A comparative study
-
Brion, P., Schroeder, R., Michel, F., and Westhof, E. 1999. Influence of specific mutations on the thermal stability of the td group I intron in vitro and on its splicing efficiency in vivo: A comparative study. RNA 5: 947-958.
-
(1999)
RNA
, vol.5
, pp. 947-958
-
-
Brion, P.1
Schroeder, R.2
Michel, F.3
Westhof, E.4
-
7
-
-
0141743751
-
Efficient and specific repair of sickle β-globin RNA by trans-splicing ribozymes
-
Byun, J., Lan, N., Long, M., and Sullenger, B.A. 2003. Efficient and specific repair of sickle β-globin RNA by trans-splicing ribozymes. RNA 9: 1254-1263.
-
(2003)
RNA
, vol.9
, pp. 1254-1263
-
-
Byun, J.1
Lan, N.2
Long, M.3
Sullenger, B.A.4
-
8
-
-
2942571539
-
The Comparative RNA Web (CRW) site: An online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
-
Cannone, J.J., Subramanian, S., Schnare, M.N., Collett, J.R., D'Souza, L.M., Du, Y., Feng, B., Lin, N., Madabusi, L.V., Muller, K.M., et al. 2002. The Comparative RNA Web (CRW) site: An online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC Bioinformatics 3: 2.
-
(2002)
BMC Bioinformatics
, vol.3
, pp. 2
-
-
Cannone, J.J.1
Subramanian, S.2
Schnare, M.N.3
Collett, J.R.4
D'Souza, L.M.5
Du, Y.6
Feng, B.7
Lin, N.8
Madabusi, L.V.9
Muller, K.M.10
-
9
-
-
0032881809
-
X-ray crystal structures of 70S ribosome functional complexes
-
Cate, J.H., Yusupov, M.M., Yusupova, G.Z., Earnest, T.N., and Noller, H.F. 1999. X-ray crystal structures of 70S ribosome functional complexes. Science 285: 2095-2104.
-
(1999)
Science
, vol.285
, pp. 2095-2104
-
-
Cate, J.H.1
Yusupov, M.M.2
Yusupova, G.Z.3
Earnest, T.N.4
Noller, H.F.5
-
10
-
-
0025367254
-
Self-splicing of group I introns
-
Cech, T.R. 1990. Self-splicing of group I introns. Annu. Rev. Biochem. 59: 543-568.
-
(1990)
Annu. Rev. Biochem.
, vol.59
, pp. 543-568
-
-
Cech, T.R.1
-
11
-
-
0018670287
-
Localization of transcribed regions on extrachromosomal ribosomal RNA genes of Tetrahymena thermophila by R-loop mapping
-
Cech, T.R. and Rio, D.C. 1979. Localization of transcribed regions on extrachromosomal ribosomal RNA genes of Tetrahymena thermophila by R-loop mapping. Proc. Natl. Acad. Sci. 76: 5051-5055.
-
(1979)
Proc. Natl. Acad. Sci.
, vol.76
, pp. 5051-5055
-
-
Cech, T.R.1
Rio, D.C.2
-
12
-
-
0347747969
-
A La protein requirement for efficient pre-tRNA folding
-
Chakshusmathi, G., Kim, S.D., Rubinson, D.A., and Wolin, S.L. 2003. A La protein requirement for efficient pre-tRNA folding. EMBO J. 22: 6562-6572.
-
(2003)
EMBO J.
, vol.22
, pp. 6562-6572
-
-
Chakshusmathi, G.1
Kim, S.D.2
Rubinson, D.A.3
Wolin, S.L.4
-
13
-
-
0027273672
-
A cold-sensitive mutation in 16S rRNA provides evidence for helical switching in ribosome assembly
-
Dammel, C.S. and Noller, H.F. 1993. A cold-sensitive mutation in 16S rRNA provides evidence for helical switching in ribosome assembly. Genes & Dev. 7: 660-670.
-
(1993)
Genes & Dev.
, vol.7
, pp. 660-670
-
-
Dammel, C.S.1
Noller, H.F.2
-
14
-
-
0031697184
-
Spb4p, an essential putative RNA helicase, is required for a late step in the assembly of 60S ribosomal subunits in Saccharomyces cerevisiae
-
de la Cruz, J., Kressler, D., Rojo, M., Tollervey, D., and Linder, P. 1998. Spb4p, an essential putative RNA helicase, is required for a late step in the assembly of 60S ribosomal subunits in Saccharomyces cerevisiae. RNA 4: 1268-1281.
-
(1998)
RNA
, vol.4
, pp. 1268-1281
-
-
De La Cruz, J.1
Kressler, D.2
Rojo, M.3
Tollervey, D.4
Linder, P.5
-
15
-
-
0036434479
-
A mechanistic framework for co-transcriptional folding of the HDV genomic ribozyme in the presence of downstream sequence
-
Diegelman-Parente, A. and Bevilacqua, P.C. 2002. A mechanistic framework for co-transcriptional folding of the HDV genomic ribozyme in the presence of downstream sequence. J. Mol. Biol. 324: 1-16.
-
(2002)
J. Mol. Biol.
, vol.324
, pp. 1-16
-
-
Diegelman-Parente, A.1
Bevilacqua, P.C.2
-
16
-
-
0018670547
-
The intervening sequence in the 26S rRNA coding region of T. thermophila is transcribed within the largest stable precursor for rRNA
-
Din, N., Engberg, J., Kaffenberger, W., and Eckert, W.A. 1979. The intervening sequence in the 26S rRNA coding region of T. thermophila is transcribed within the largest stable precursor for rRNA. Cell 18: 525-532.
-
(1979)
Cell
, vol.18
, pp. 525-532
-
-
Din, N.1
Engberg, J.2
Kaffenberger, W.3
Eckert, W.A.4
-
17
-
-
0030865308
-
Kinetics of hairpin ribozyme cleavage in yeast
-
Donahue, C.P. and Fedor, M.J. 1997. Kinetics of hairpin ribozyme cleavage in yeast. RNA 3: 961-973.
-
(1997)
RNA
, vol.3
, pp. 961-973
-
-
Donahue, C.P.1
Fedor, M.J.2
-
18
-
-
0034695408
-
The kinetic mechanism of the hairpin ribozyme in vivo: Influence of RNA helix stability on intracellular cleavage kinetics
-
Donahue, C.P., Yadava, R.S., Nesbitt, S.M., and Fedor, M.J. 2000. The kinetic mechanism of the hairpin ribozyme in vivo: Influence of RNA helix stability on intracellular cleavage kinetics. J. Mol. Biol. 295: 693-707.
-
(2000)
J. Mol. Biol.
, vol.295
, pp. 693-707
-
-
Donahue, C.P.1
Yadava, R.S.2
Nesbitt, S.M.3
Fedor, M.J.4
-
19
-
-
0036512117
-
Messenger-RNA-binding proteins and the messages they carry
-
Dreyfuss, G., Kim, V.N., and Kataoka, N. 2002. Messenger-RNA-binding proteins and the messages they carry. Nat. Rev. Mol. Cell Biol. 3: 195-205.
-
(2002)
Nat. Rev. Mol. Cell Biol.
, vol.3
, pp. 195-205
-
-
Dreyfuss, G.1
Kim, V.N.2
Kataoka, N.3
-
20
-
-
0027724213
-
Self-splicing of the Tetrahymena pre-rRNA is decreased by misfolding during transcription
-
Emerick, V.L. and Woodson, S.A. 1993. Self-splicing of the Tetrahymena pre-rRNA is decreased by misfolding during transcription. Biochemistry 32: 14062-14067.
-
(1993)
Biochemistry
, vol.32
, pp. 14062-14067
-
-
Emerick, V.L.1
Woodson, S.A.2
-
21
-
-
0029800606
-
Analysis of rate-determining conformational changes during self-splicing of the Tetrahymena intron
-
Emerick, V.L., Pan, J., and Woodson, S.A. 1996. Analysis of rate-determining conformational changes during self-splicing of the Tetrahymena intron. Biochemistry 35: 13469-13477.
-
(1996)
Biochemistry
, vol.35
, pp. 13469-13477
-
-
Emerick, V.L.1
Pan, J.2
Woodson, S.A.3
-
22
-
-
0031813786
-
5′ processing of tRNA precursors can be modulated by the human la antigen phosphoprotein
-
Fan, H., Goodier, J.L., Chamberlain, J.R., Engelke, D.R., and Maraia, R.J. 1998. 5′ processing of tRNA precursors can be modulated by the human La antigen phosphoprotein. Mol. Cell. Biol. 18: 3201-3211.
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 3201-3211
-
-
Fan, H.1
Goodier, J.L.2
Chamberlain, J.R.3
Engelke, D.R.4
Maraia, R.J.5
-
24
-
-
0025903857
-
Applications of high efficiency lithium acetate transformation of intact yeast cells using single-stranded nucleic acids as carrier
-
Gietz, R.D. and Schiestl, R.H. 1991. Applications of high efficiency lithium acetate transformation of intact yeast cells using single-stranded nucleic acids as carrier. Yeast 7: 253-263.
-
(1991)
Yeast
, vol.7
, pp. 253-263
-
-
Gietz, R.D.1
Schiestl, R.H.2
-
25
-
-
19344370199
-
Crosstalk in gene expression: Coupling and co-regulation of rDNA transcription, pre-ribosome assembly and pre-rRNA processing
-
Granneman, S. and Baserga, S.J. 2005. Crosstalk in gene expression: Coupling and co-regulation of rDNA transcription, pre-ribosome assembly and pre-rRNA processing. Curr. Opin. Cell Biol. 17: 281-286.
-
(2005)
Curr. Opin. Cell Biol.
, vol.17
, pp. 281-286
-
-
Granneman, S.1
Baserga, S.J.2
-
26
-
-
17644426039
-
Influence of RNA structural stability on the RNA chaperone activity of the Escherichia coli protein StpA
-
Grossberger, R., Mayer, O., Waldsich, C., Semrad, K., Urschitz, S., and Schroeder, R. 2005. Influence of RNA structural stability on the RNA chaperone activity of the Escherichia coli protein StpA. Nucleic Acids Res. 33: 2280-2289.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 2280-2289
-
-
Grossberger, R.1
Mayer, O.2
Waldsich, C.3
Semrad, K.4
Urschitz, S.5
Schroeder, R.6
-
27
-
-
0033570893
-
Self-splicing of the Tetrahymena intron from mRNA in mammalian cells
-
Hagen, M. and Cech, T.R. 1999. Self-splicing of the Tetrahymena intron from mRNA in mammalian cells. EMBO J. 18: 6491-6500.
-
(1999)
EMBO J.
, vol.18
, pp. 6491-6500
-
-
Hagen, M.1
Cech, T.R.2
-
28
-
-
0038475911
-
Effect of transcription on folding of the Tetrahymena ribozyme
-
Heilman-Miller, S.L. and Woodson, S.A. 2003. Effect of transcription on folding of the Tetrahymena ribozyme. RNA 9: 722-733.
-
(2003)
RNA
, vol.9
, pp. 722-733
-
-
Heilman-Miller, S.L.1
Woodson, S.A.2
-
29
-
-
0036395090
-
Distribution of rRNA introns in the three-dimensional structure of the ribosome
-
Jackson, S., Cannone, J., Lee, J., Gutell, R., and Woodson, S. 2002. Distribution of rRNA introns in the three-dimensional structure of the ribosome. J. Mol. Biol. 323: 35-52.
-
(2002)
J. Mol. Biol.
, vol.323
, pp. 35-52
-
-
Jackson, S.1
Cannone, J.2
Lee, J.3
Gutell, R.4
Woodson, S.5
-
30
-
-
4644266762
-
Intracellular folding of the Tetrahymena group I intron depends on exon sequence and promoter choice
-
Koduvayur, S.P. and Woodson, S.A. 2004. Intracellular folding of the Tetrahymena group I intron depends on exon sequence and promoter choice. RNA 10: 1526-1532.
-
(2004)
RNA
, vol.10
, pp. 1526-1532
-
-
Koduvayur, S.P.1
Woodson, S.A.2
-
31
-
-
0033509092
-
Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae
-
Kressler, D., Linder, P., and de La Cruz, J. 1999. Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae. Mol. Cell. Biol. 19: 7897-7912.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 7897-7912
-
-
Kressler, D.1
Linder, P.2
De La Cruz, J.3
-
32
-
-
33646089899
-
Local kinetic measures of macromolecular structure reveal partitioning among multiple parallel pathways from the earliest steps in the folding of a large RNA molecule
-
Laederach, A., Shcherbakova, I., Liang, M.P., Brenowitz, M., and Altman, R.B. 2006. Local kinetic measures of macromolecular structure reveal partitioning among multiple parallel pathways from the earliest steps in the folding of a large RNA molecule. J. Mol. Biol. 358: 1179-1190.
-
(2006)
J. Mol. Biol.
, vol.358
, pp. 1179-1190
-
-
Laederach, A.1
Shcherbakova, I.2
Liang, M.P.3
Brenowitz, M.4
Altman, R.B.5
-
33
-
-
0031684421
-
I-PpoI, the endonuclease encoded by the group I intron PpLSU3, is expressed from an RNA polymerase I transcript
-
Lin, J. and Vogt, V.M. 1998. I-PpoI, the endonuclease encoded by the group I intron PpLSU3, is expressed from an RNA polymerase I transcript. Mol. Cell. Biol. 18: 5809-5817.
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 5809-5817
-
-
Lin, J.1
Vogt, V.M.2
-
34
-
-
0032866071
-
Evaluating group I intron catalytic efficiency in mammalian cells
-
Long, M.B. and Sullenger, B.A. 1999. Evaluating group I intron catalytic efficiency in mammalian cells. Mol. Cell. Biol. 19: 6479-6487.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 6479-6487
-
-
Long, M.B.1
Sullenger, B.A.2
-
35
-
-
21244459458
-
Kinetics and thermodynamics make different contributions to RNA folding in vitro and in yeast
-
Mahen, E.M., Harger, J.W., Calderon, E.M., and Fedor, M.J. 2005. Kinetics and thermodynamics make different contributions to RNA folding in vitro and in yeast. Mol. Cell 19: 27-37.
-
(2005)
Mol. Cell
, vol.19
, pp. 27-37
-
-
Mahen, E.M.1
Harger, J.W.2
Calderon, E.M.3
Fedor, M.J.4
-
36
-
-
0028953840
-
Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds
-
Mumberg, F., Muller, R., and Funk, M. 1995. Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. Gene 156: 119-122.
-
(1995)
Gene
, vol.156
, pp. 119-122
-
-
Mumberg, F.1
Muller, R.2
Funk, M.3
-
37
-
-
0037107547
-
On the importance of being co-transcriptional
-
Neugebauer, K.M. 2002. On the importance of being co-transcriptional. J. Cell Sci. 115: 3865-3871.
-
(2002)
J. Cell Sci.
, vol.115
, pp. 3865-3871
-
-
Neugebauer, K.M.1
-
38
-
-
0033600805
-
Facilitation of group I splicing in vivo: Misfolding of the Tetrahymena IVS and the role of ribosomal RNA exons
-
Nikolcheva, T. and Woodson, S.A. 1999. Facilitation of group I splicing in vivo: Misfolding of the Tetrahymena IVS and the role of ribosomal RNA exons. J. Mol. Biol. 292: 557-567.
-
(1999)
J. Mol. Biol.
, vol.292
, pp. 557-567
-
-
Nikolcheva, T.1
Woodson, S.A.2
-
39
-
-
0025797364
-
Synthesis of large rRNAs by RNA polymerase II in mutants of Saccharomyces cerevisiae defective in RNA polymerase I
-
Nogi, Y., Yano, R., and Nomura, M. 1991. Synthesis of large rRNAs by RNA polymerase II in mutants of Saccharomyces cerevisiae defective in RNA polymerase I. Proc. Natl. Acad. Sci. 88: 3962-3966.
-
(1991)
Proc. Natl. Acad. Sci.
, vol.88
, pp. 3962-3966
-
-
Nogi, Y.1
Yano, R.2
Nomura, M.3
-
40
-
-
0027390138
-
Gene RRN4 in Saccharomyces cerevisiae encodes the A12.2 subunit of RNA polymerase I and is essential only at high temperatures
-
Nogi, Y., Yano, R., Dodd, J., Carles, C., and Nomura, M. 1993. Gene RRN4 in Saccharomyces cerevisiae encodes the A12.2 subunit of RNA polymerase I and is essential only at high temperatures. Mol. Cell. Biol. 13: 114-122.
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 114-122
-
-
Nogi, Y.1
Yano, R.2
Dodd, J.3
Carles, C.4
Nomura, M.5
-
41
-
-
0027477393
-
Structural alterations of the nucleolus in mutants of Saccharomyces cerevisiae defective in RNA polymerase I
-
Oakes, M., Nogi, Y., Clark, M.W., and Nomura, M. 1993. Structural alterations of the nucleolus in mutants of Saccharomyces cerevisiae defective in RNA polymerase I. Mol. Cell. Biol. 13: 2441-2455.
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 2441-2455
-
-
Oakes, M.1
Nogi, Y.2
Clark, M.W.3
Nomura, M.4
-
43
-
-
0032563297
-
Folding intermediates of a selfsplicing RNA: Mispairing of the catalytic core
-
Pan, J. and Woodson, S.A. 1998. Folding intermediates of a selfsplicing RNA: Mispairing of the catalytic core. J. Mol. Biol. 280: 597-609.
-
(1998)
J. Mol. Biol.
, vol.280
, pp. 597-609
-
-
Pan, J.1
Woodson, S.A.2
-
44
-
-
0033544723
-
The effect of long-range loop-loop interactions on folding of the Tetrahymena self-splicing RNA
-
Pan, J. and Woodson, S.A. 1999. The effect of long-range loop-loop interactions on folding of the Tetrahymena self-splicing RNA. J. Mol. Biol. 294: 955-965.
-
(1999)
J. Mol. Biol.
, vol.294
, pp. 955-965
-
-
Pan, J.1
Woodson, S.A.2
-
45
-
-
0031576334
-
Folding of RNA involves parallel pathways
-
Pan, J., Thirumalai, D., and Woodson, S.A. 1997. Folding of RNA involves parallel pathways. J. Mol. Biol. 273: 7-13.
-
(1997)
J. Mol. Biol.
, vol.273
, pp. 7-13
-
-
Pan, J.1
Thirumalai, D.2
Woodson, S.A.3
-
46
-
-
0033065083
-
Magnesium-dependent folding of self-splicing RNA: Exploring the link between cooperativity, thermodynamics, and kinetics
-
Pan, J., Thirumalai, D., and Woodson, S.A. 1999a. Magnesium-dependent folding of self-splicing RNA: Exploring the link between cooperativity, thermodynamics, and kinetics. Proc. Natl. Acad. Sci. 96: 6149-6154.
-
(1999)
Proc. Natl. Acad. Sci.
, vol.96
, pp. 6149-6154
-
-
Pan, J.1
Thirumalai, D.2
Woodson, S.A.3
-
47
-
-
0033578330
-
Folding of a large ribozyme during transcription and the effect of the elongation factor NusA
-
Pan, T., Artsimovitch, I., Fang, X.W., Landick, R., and Sosnick, T.R. 1999b. Folding of a large ribozyme during transcription and the effect of the elongation factor NusA. Proc. Natl. Acad. Sci. 96: 9545-9550.
-
(1999)
Proc. Natl. Acad. Sci.
, vol.96
, pp. 9545-9550
-
-
Pan, T.1
Artsimovitch, I.2
Fang, X.W.3
Landick, R.4
Sosnick, T.R.5
-
48
-
-
0034635353
-
Fast folding of a ribozyme by stabilizing core interactions: Evidence for multiple folding pathways in RNA
-
Pan, J., Deras, M.L., and Woodson, S.A. 2000. Fast folding of a ribozyme by stabilizing core interactions: Evidence for multiple folding pathways in RNA. J. Mol. Biol. 296: 133-144.
-
(2000)
J. Mol. Biol.
, vol.296
, pp. 133-144
-
-
Pan, J.1
Deras, M.L.2
Woodson, S.A.3
-
49
-
-
0032535451
-
A role for the yeast la protein in U6 snRNP assembly: Evidence that the la protein is a molecular chaperone for RNA polymerase III transcripts
-
Pannone, B.K., Xue, D.H., and Wolin, S.L. 1998. A role for the yeast La protein in U6 snRNP assembly: Evidence that the La protein is a molecular chaperone for RNA polymerase III transcripts. EMBO J. 17: 7442-7453.
-
(1998)
EMBO J.
, vol.17
, pp. 7442-7453
-
-
Pannone, B.K.1
Xue, D.H.2
Wolin, S.L.3
-
50
-
-
0025978956
-
Measurement of mRNA decay rates in Saccharomyces cerevisiae
-
Parker, R., Herrick, D., Peltz, S.W., and Jacobson, A. 1991. Measurement of mRNA decay rates in Saccharomyces cerevisiae. Methods Enzymol. 194: 415-423.
-
(1991)
Methods Enzymol.
, vol.194
, pp. 415-423
-
-
Parker, R.1
Herrick, D.2
Peltz, S.W.3
Jacobson, A.4
-
51
-
-
0031731302
-
The structure of the ITS2-proximal stem is required for pre-rRNA processing in yeast
-
Peculis, B.A. and Greer, C.L. 1998. The structure of the ITS2-proximal stem is required for pre-rRNA processing in yeast. RNA 4: 1610-1622.
-
(1998)
RNA
, vol.4
, pp. 1610-1622
-
-
Peculis, B.A.1
Greer, C.L.2
-
52
-
-
0030987608
-
RNA folding kinetics regulates translation of phage MS2 maturation gene
-
Poot, R.A., Tsareva, N.V., Boni, I.V., and van Duin, J. 1997. RNA folding kinetics regulates translation of phage MS2 maturation gene. Proc. Natl. Acad. Sci. 94: 10110-10115.
-
(1997)
Proc. Natl. Acad. Sci.
, vol.94
, pp. 10110-10115
-
-
Poot, R.A.1
Tsareva, N.V.2
Boni, I.V.3
Van Duin, J.4
-
53
-
-
31044433976
-
Transcriptional response of steady-state yeast cultures to transient perturbations in carbon source
-
Ronen, M. and Botstein, D. 2006. Transcriptional response of steady-state yeast cultures to transient perturbations in carbon source. Proc. Natl. Acad. Sci. 103: 389-394.
-
(2006)
Proc. Natl. Acad. Sci.
, vol.103
, pp. 389-394
-
-
Ronen, M.1
Botstein, D.2
-
54
-
-
0003529272
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor NY
-
Rose, M.D., Winston, F., Hieter, P., and Sherman, F. 1990. Methods in yeast genetics: A laboratory course manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor NY.
-
(1990)
Methods in Yeast Genetics: A Laboratory Course Manual
-
-
Rose, M.D.1
Winston, F.2
Hieter, P.3
Sherman, F.4
-
55
-
-
0037039464
-
Exploring the folding landscape of a structured RNA
-
Russell, R., Zhuang, X., Babcock, H.P., Millett, I.S., Doniach, S., Chu, S., and Herschlag, D. 2002. Exploring the folding landscape of a structured RNA. Proc. Natl. Acad. Sci. 99: 155-160.
-
(2002)
Proc. Natl. Acad. Sci.
, vol.99
, pp. 155-160
-
-
Russell, R.1
Zhuang, X.2
Babcock, H.P.3
Millett, I.S.4
Doniach, S.5
Chu, S.6
Herschlag, D.7
-
56
-
-
8444229753
-
Strategies for RNA folding and assembly
-
Schroeder, R., Barta, A., and Semrad, K. 2004. Strategies for RNA folding and assembly. Nat. Rev. Mol. Cell Biol. 5: 908-919.
-
(2004)
Nat. Rev. Mol. Cell Biol.
, vol.5
, pp. 908-919
-
-
Schroeder, R.1
Barta, A.2
Semrad, K.3
-
57
-
-
0034732089
-
Yeast Sm-like proteins function in mRNA decapping and decay
-
Tharun, S., He, W., Mayes, A.E., Lennertz, P., Beggs, J.D., and Parker, R. 2000. Yeast Sm-like proteins function in mRNA decapping and decay. Nature 404: 515-518.
-
(2000)
Nature
, vol.404
, pp. 515-518
-
-
Tharun, S.1
He, W.2
Mayes, A.E.3
Lennertz, P.4
Beggs, J.D.5
Parker, R.6
-
58
-
-
0001103473
-
Kinetics of folding of protein and RNA
-
Thirumalai, D. and Woodson, S.A. 1996. Kinetics of folding of protein and RNA. Acc. Chem. Res. 29: 433-439.
-
(1996)
Acc. Chem. Res.
, vol.29
, pp. 433-439
-
-
Thirumalai, D.1
Woodson, S.A.2
-
60
-
-
0029258928
-
Keeping RNA happy
-
Uhlenbeck, O.C. 1995. Keeping RNA happy. RNA 1: 4-6.
-
(1995)
RNA
, vol.1
, pp. 4-6
-
-
Uhlenbeck, O.C.1
-
61
-
-
0036712305
-
RNA chaperone StpA loosens interactions of the tertiary structure in the td group I intron in vivo
-
Waldsich, C., Grossberger, R., and Schroeder, R. 2002. RNA chaperone StpA loosens interactions of the tertiary structure in the td group I intron in vivo. Genes & Dev. 16: 2300-2312.
-
(2002)
Genes & Dev.
, vol.16
, pp. 2300-2312
-
-
Waldsich, C.1
Grossberger, R.2
Schroeder, R.3
-
62
-
-
15944382675
-
The speed of RNA transcription and metabolite binding kinetics operate an FMN riboswitch
-
Wickiser, J.K., Winkler, W.C., Breaker, R.R., and Crothers, D.M. 2005. The speed of RNA transcription and metabolite binding kinetics operate an FMN riboswitch. Mol. Cell 18: 49-60.
-
(2005)
Mol. Cell
, vol.18
, pp. 49-60
-
-
Wickiser, J.K.1
Winkler, W.C.2
Breaker, R.R.3
Crothers, D.M.4
-
63
-
-
0026776101
-
Exon sequences distant from the splice junction are required for efficient self-splicing of the Tetrahymena IVS
-
Woodson, S.A. 1992. Exon sequences distant from the splice junction are required for efficient self-splicing of the Tetrahymena IVS. Nucleic Acids Res. 20: 4027-4032.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 4027-4032
-
-
Woodson, S.A.1
-
64
-
-
0034043484
-
Recent insights on RNA folding mechanisms from catalytic RNA
-
Woodson, S.A. 2000. Recent insights on RNA folding mechanisms from catalytic RNA. Cell. Mol. Life Sci. 57: 796-808.
-
(2000)
Cell. Mol. Life Sci.
, vol.57
, pp. 796-808
-
-
Woodson, S.A.1
-
65
-
-
0029874598
-
The kinetic folding pathway of the Tetrahymena ribozyme reveals possible similarities between RNA and protein folding
-
Zarrinkar, P.P. and Williamson, J.R. 1996. The kinetic folding pathway of the Tetrahymena ribozyme reveals possible similarities between RNA and protein folding. Nat. Struct. Biol. 3: 432-438.
-
(1996)
Nat. Struct. Biol.
, vol.3
, pp. 432-438
-
-
Zarrinkar, P.P.1
Williamson, J.R.2
-
66
-
-
0028349788
-
Mutations in an essential U2 small nuclear RNA structure cause cold-sensitive U2 small nuclear ribonucleoprotein function by favoring competing alternative U2 RNA structures
-
Zavanelli, M.I., Britton, J.S., Igel, A.H., and Ares Jr., M. 1994. Mutations in an essential U2 small nuclear RNA structure cause cold-sensitive U2 small nuclear ribonucleoprotein function by favoring competing alternative U2 RNA structures. Mol. Cell. Biol. 14: 1689-1697.
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 1689-1697
-
-
Zavanelli, M.I.1
Britton, J.S.2
Igel, A.H.3
Ares Jr., M.4
-
67
-
-
0029295846
-
In vivo facilitation of Tetrahymena group I intron splicing in Escherichia coli preribosomal RNA
-
Zhang, F., Ramsay, E.S., and Woodson, S.A. 1995. In vivo facilitation of Tetrahymena group I intron splicing in Escherichia coli preribosomal RNA. RNA 1: 284-292.
-
(1995)
RNA
, vol.1
, pp. 284-292
-
-
Zhang, F.1
Ramsay, E.S.2
Woodson, S.A.3
-
68
-
-
0034674420
-
A single-molecule study of RNA catalysis and folding
-
Zhuang, X., Bartley, L.E., Babcock, H.P., Russell, R., Ha, T., Herschlag, D., and Chu, S. 2000. A single-molecule study of RNA catalysis and folding. Science 288: 2048-2051.
-
(2000)
Science
, vol.288
, pp. 2048-2051
-
-
Zhuang, X.1
Bartley, L.E.2
Babcock, H.P.3
Russell, R.4
Ha, T.5
Herschlag, D.6
Chu, S.7
|