-
1
-
-
0031320053
-
Three-dimensional model of Tetrahymena group I intron
-
Amano M. Three-dimensional model of Tetrahymena group I intron. Nucl. Acids Symp. Ser. 37:1997;227-228.
-
(1997)
Nucl. Acids Symp. Ser.
, vol.37
, pp. 227-228
-
-
Amano, M.1
-
2
-
-
0027434244
-
Thermal unfolding of a group I ribozyme: The low-temperature transition is primarily disruption of tertiary structure
-
Banerjee A. R., Jaeger J. A., Turner D. H. Thermal unfolding of a group I ribozyme: the low-temperature transition is primarily disruption of tertiary structure. Biochemistry. 32:1993;153-163.
-
(1993)
Biochemistry
, vol.32
, pp. 153-163
-
-
Banerjee, A.R.1
Jaeger, J.A.2
Turner, D.H.3
-
3
-
-
0025300631
-
Minimum secondary structure requirements for catalytic activity of a self-splicing group I intron
-
Beaudry A. A., Joyce G. F. Minimum secondary structure requirements for catalytic activity of a self-splicing group I intron. Biochemistry. 29:1990;6534-6539.
-
(1990)
Biochemistry
, vol.29
, pp. 6534-6539
-
-
Beaudry, A.A.1
Joyce, G.F.2
-
4
-
-
0029796982
-
RNA tertiary structure mediation by adenosine platforms
-
Cate J. H., Gooding A. R., Podell E., Zhou K., Golden B. L., Szewczak A. A., Kundrot C. E., Cech T. R., Doudna J. A. RNA tertiary structure mediation by adenosine platforms. Science. 273:1996;1696-1699.
-
(1996)
Science
, vol.273
, pp. 1696-1699
-
-
Cate, J.H.1
Gooding, A.R.2
Podell, E.3
Zhou, K.4
Golden, B.L.5
Szewczak, A.A.6
Kundrot, C.E.7
Cech, T.R.8
Doudna, J.A.9
-
5
-
-
0028441183
-
Representation of the secondary and tertiary structure of group I introns
-
Cech T. R., Damberger S. H., Gutell R. R. Representation of the secondary and tertiary structure of group I introns. Nature Struct. Biol. 1:1994;273-280.
-
(1994)
Nature Struct. Biol.
, vol.1
, pp. 273-280
-
-
Cech, T.R.1
Damberger, S.H.2
Gutell, R.R.3
-
6
-
-
0031552355
-
Multiple tertiary interactions involving domain II of group II self-splicing introns
-
Costa M., Deme E., Jacquier A., Michel F. Multiple tertiary interactions involving domain II of group II self-splicing introns. J. Mol. Biol. 267:1997;520-536.
-
(1997)
J. Mol. Biol.
, vol.267
, pp. 520-536
-
-
Costa, M.1
Deme, E.2
Jacquier, A.3
Michel, F.4
-
7
-
-
0030952270
-
The P4-P6 domain directs higher order folding of the Tetrahymena ribozyme core
-
Doherty E. A., Doudna J. A. The P4-P6 domain directs higher order folding of the Tetrahymena ribozyme core. Biochemistry. 36:1997;3159-3169.
-
(1997)
Biochemistry
, vol.36
, pp. 3159-3169
-
-
Doherty, E.A.1
Doudna, J.A.2
-
8
-
-
0033537681
-
Assembly of an exceptionally stable RNA tertiary interface in a group I ribozyme
-
Doherty E. A., Herschlag D., Doudna J. A. Assembly of an exceptionally stable RNA tertiary interface in a group I ribozyme. Biochemistry. 38:1999;2982-2990.
-
(1999)
Biochemistry
, vol.38
, pp. 2982-2990
-
-
Doherty, E.A.1
Herschlag, D.2
Doudna, J.A.3
-
9
-
-
0025371287
-
An ultraviolet-inducible adenosine-adenosine cross-link reflects the catalytic structure of the Tetrahymena ribozyme
-
Downs W. D., Cech T. R. An ultraviolet-inducible adenosine-adenosine cross-link reflects the catalytic structure of the Tetrahymena ribozyme. Biochemistry. 29:1990;5605-5613.
-
(1990)
Biochemistry
, vol.29
, pp. 5605-5613
-
-
Downs, W.D.1
Cech, T.R.2
-
10
-
-
0029904022
-
Kinetic pathway for folding of the Tetrahymena ribozyme revealed by three UV-inducible crosslinks
-
Downs W. D., Cech T. R. Kinetic pathway for folding of the Tetrahymena ribozyme revealed by three UV-inducible crosslinks. RNA. 2:1996;718-732.
-
(1996)
RNA
, vol.2
, pp. 718-732
-
-
Downs, W.D.1
Cech, T.R.2
-
11
-
-
0027724213
-
Self-splicing of the Tetrahymena pre-rRNA is decreased by misfolding during transcription
-
Emerick V. L., Woodson S. A. Self-splicing of the Tetrahymena pre-rRNA is decreased by misfolding during transcription. Biochemistry. 32:1993;14062-14067.
-
(1993)
Biochemistry
, vol.32
, pp. 14062-14067
-
-
Emerick, V.L.1
Woodson, S.A.2
-
12
-
-
0027940350
-
Fingerprinting the folding of a group I precursor RNA
-
Emerick V. L., Woodson S. A. Fingerprinting the folding of a group I precursor RNA. Proc. Natl Acad. Sci. USA. 91:1994;9675-9679.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 9675-9679
-
-
Emerick, V.L.1
Woodson, S.A.2
-
13
-
-
0029800606
-
Analysis of rate-determining conformational changes during self-splicing of the Tetrahymena intron
-
Emerick V. L., Pan J., Woodson S. A. Analysis of rate-determining conformational changes during self-splicing of the Tetrahymena intron. Biochemistry. 35:1996;13469-13477.
-
(1996)
Biochemistry
, vol.35
, pp. 13469-13477
-
-
Emerick, V.L.1
Pan, J.2
Woodson, S.A.3
-
14
-
-
0032500731
-
A preorganized active site in the crystal structure of the Tetrahymena ribozyme
-
Golden B. L., Gooding A. R., Podell E. R., Cech T. R. A preorganized active site in the crystal structure of the Tetrahymena ribozyme. Science. 282:1998;259-264.
-
(1998)
Science
, vol.282
, pp. 259-264
-
-
Golden, B.L.1
Gooding, A.R.2
Podell, E.R.3
Cech, T.R.4
-
15
-
-
0030831172
-
Long-range interaction between the P2.1 and P9.1 peripheral domains of the Tetrahymena ribozyme
-
Ikawa Y., Ohta H., Shiraishi H., Inoue T. Long-range interaction between the P2.1 and P9.1 peripheral domains of the Tetrahymena ribozyme. Nucl. Acids Res. 25:1997;1761-1765.
-
(1997)
Nucl. Acids Res.
, vol.25
, pp. 1761-1765
-
-
Ikawa, Y.1
Ohta, H.2
Shiraishi, H.3
Inoue, T.4
-
16
-
-
0031940356
-
Trans-activation of the Tetrahymena ribozyme by its P2-2.1 domains
-
Ikawa Y., Shiraishi H., Inoue T. Trans-activation of the Tetrahymena ribozyme by its P2-2.1 domains. J Biochem. 123:1998;528-533.
-
(1998)
J Biochem.
, vol.123
, pp. 528-533
-
-
Ikawa, Y.1
Shiraishi, H.2
Inoue, T.3
-
17
-
-
0033118274
-
Trans-activation of the Tetrahymena group I intron ribozyme via a non- native RNA-RNA interaction
-
Ikawa Y., Shiraishi H., Inoue T. Trans-activation of the Tetrahymena group I intron ribozyme via a non- native RNA-RNA interaction. Nucl. Acids Res. 27:1999;1650-1655.
-
(1999)
Nucl. Acids Res.
, vol.27
, pp. 1650-1655
-
-
Ikawa, Y.1
Shiraishi, H.2
Inoue, T.3
-
18
-
-
0027433710
-
Monitoring of the cooperative unfolding of the sunY group I intron of bacteriophage T4. The active form of the sunY ribozyme is stabilized by multiple interactions with 3′ terminal intron components
-
Jaeger L., Westhof E., Michel F. Monitoring of the cooperative unfolding of the sunY group I intron of bacteriophage T4. The active form of the sunY ribozyme is stabilized by multiple interactions with 3′ terminal intron components. J. Mol. Biol. 234:1993;331-346.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 331-346
-
-
Jaeger, L.1
Westhof, E.2
Michel, F.3
-
19
-
-
0002849286
-
The structure of group I ribozymes
-
F. Eckstein, & D. M. J. Lilley. Berlin, Heidelberg: Springer-Verlag
-
Jaeger L., Michel F., Westhof E. The structure of group I ribozymes. Eckstein F., Lilley D. M. J. Catalytic RNA. 1996;33-51 Springer-Verlag, Berlin, Heidelberg.
-
(1996)
Catalytic RNA
, pp. 33-51
-
-
Jaeger, L.1
Michel, F.2
Westhof, E.3
-
20
-
-
0028239266
-
Two major tertiary folding transitions of the Tetrahymena catalytic RNA
-
Laggerbauer B., Murphy F. L., Cech T. R. Two major tertiary folding transitions of the Tetrahymena catalytic RNA. EMBO J. 13:1994;2669-2676.
-
(1994)
EMBO J.
, vol.13
, pp. 2669-2676
-
-
Laggerbauer, B.1
Murphy, F.L.2
Cech, T.R.3
-
21
-
-
0030452773
-
New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: A complete 3D model of the Tetrahymena thermophila ribozyme
-
Lehnert V., Jaeger L., Michel F., Westhof E. New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: a complete 3D model of the Tetrahymena thermophila ribozyme. Chem. Biol. 3:1996;993-1009.
-
(1996)
Chem. Biol.
, vol.3
, pp. 993-1009
-
-
Lehnert, V.1
Jaeger, L.2
Michel, F.3
Westhof, E.4
-
22
-
-
0025678737
-
Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis
-
Michel F., Westhof E. Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis. J. Mol. Biol. 216:1990;585-610.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 585-610
-
-
Michel, F.1
Westhof, E.2
-
23
-
-
0027173193
-
An independently folding domain of RNA tertiary structure within the Tetrahymena ribozyme
-
Murphy F. L., Cech T. R. An independently folding domain of RNA tertiary structure within the Tetrahymena ribozyme. Biochemistry. 32:1993;5291-5300.
-
(1993)
Biochemistry
, vol.32
, pp. 5291-5300
-
-
Murphy, F.L.1
Cech, T.R.2
-
24
-
-
0019888579
-
Secondary structure model for 23S ribosomal RNA
-
Noller H. F., Kop J., Wheaton V., Brosius J., Gutell R. R., Kopylov A. M., Dohme F., Herr W., Stahl D. A., Gupta R., Waese C. R. Secondary structure model for 23S ribosomal RNA. Nucl. Acids Res. 9:1981;6167-6189.
-
(1981)
Nucl. Acids Res.
, vol.9
, pp. 6167-6189
-
-
Noller, H.F.1
Kop, J.2
Wheaton, V.3
Brosius, J.4
Gutell, R.R.5
Kopylov, A.M.6
Dohme, F.7
Herr, W.8
Stahl, D.A.9
Gupta, R.10
Waese, C.R.11
-
25
-
-
0032563297
-
Folding intermediates of a self-splicing RNA: Mispairing of the catalytic core
-
Pan J., Woodson S. A. Folding intermediates of a self-splicing RNA: mispairing of the catalytic core. J. Mol. Biol. 280:1998;597-609.
-
(1998)
J. Mol. Biol.
, vol.280
, pp. 597-609
-
-
Pan, J.1
Woodson, S.A.2
-
27
-
-
0033065083
-
Magnesium-dependent folding of self-splicing RNA: Exploring the link between cooperativity, thermodynamics, and kinetics
-
Pan J., Thirumalai D., Woodson S. A. Magnesium-dependent folding of self-splicing RNA: exploring the link between cooperativity, thermodynamics, and kinetics. Proc. Natl Acad. Sci. USA. 96:1999;6149-6154.
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 6149-6154
-
-
Pan, J.1
Thirumalai, D.2
Woodson, S.A.3
-
28
-
-
0025155692
-
Direct measurement of oligonucleotide substrate binding to wild-type and mutant ribozymes from Tetrahymena
-
Pyle A. M., McSwiggen J. A., Cech T. R. Direct measurement of oligonucleotide substrate binding to wild-type and mutant ribozymes from Tetrahymena. Proc. Natl Acad. Sci. USA. 87:1990;8187-8191.
-
(1990)
Proc. Natl Acad. Sci. USA
, vol.87
, pp. 8187-8191
-
-
Pyle, A.M.1
McSwiggen, J.A.2
Cech, T.R.3
-
29
-
-
0032549780
-
RNA folding at millisecond intervals by synchrotron hydroxyl radical footprinting
-
Sclavi B., Sullivan M., Chance M. R., Brenowitz M., Woodson S. A. RNA folding at millisecond intervals by synchrotron hydroxyl radical footprinting. Science. 279:1998;1940-1943.
-
(1998)
Science
, vol.279
, pp. 1940-1943
-
-
Sclavi, B.1
Sullivan, M.2
Chance, M.R.3
Brenowitz, M.4
Woodson, S.A.5
-
30
-
-
0029805902
-
Activity and thermostability of the small self-splicing group I intron in the pre-tRNA(lle) of the purple bacterium Azoarcus
-
Tanner M., Cech T. Activity and thermostability of the small self-splicing group I intron in the pre-tRNA(lle) of the purple bacterium Azoarcus. RNA. 2:1996;74-83.
-
(1996)
RNA
, vol.2
, pp. 74-83
-
-
Tanner, M.1
Cech, T.2
-
31
-
-
0032549735
-
Kinetic intermediates trapped by native interactions in RNA folding
-
Treiber D. K., Rook M. S., Zarrinkar P. P., Williamson J. R. Kinetic intermediates trapped by native interactions in RNA folding. Science. 279:1998;1943-1946.
-
(1998)
Science
, vol.279
, pp. 1943-1946
-
-
Treiber, D.K.1
Rook, M.S.2
Zarrinkar, P.P.3
Williamson, J.R.4
-
32
-
-
0026017131
-
Reconstitution of a group I intron self-splicing reaction with an activator RNA
-
van der Horst G., Christian A., Inoue T. Reconstitution of a group I intron self-splicing reaction with an activator RNA. Proc. Natl Acad. Sci. USA. 88:1991;184-188.
-
(1991)
Proc. Natl Acad. Sci. USA
, vol.88
, pp. 184-188
-
-
Van Der Horst, G.1
Christian, A.2
Inoue, T.3
-
34
-
-
0026776101
-
Exon sequences distant from the splice junction are required for efficient self-splicing of the Tetrahymena IVS
-
Woodson S. A. Exon sequences distant from the splice junction are required for efficient self-splicing of the Tetrahymena IVS. Nucl. Acids Res. 20:1992;4027-4032.
-
(1992)
Nucl. Acids Res.
, vol.20
, pp. 4027-4032
-
-
Woodson, S.A.1
-
35
-
-
0027991626
-
Kinetic intermediates in RNA folding
-
Zarrinkar P. P., Williamson J. R. Kinetic intermediates in RNA folding. Science. 265:1994;918-924.
-
(1994)
Science
, vol.265
, pp. 918-924
-
-
Zarrinkar, P.P.1
Williamson, J.R.2
-
36
-
-
0029864990
-
The P9.1-P9.2 peripheral extension helps guide folding of the Tetrahymena ribozyme
-
Zarrinkar P. P., Williamson J. R. The P9.1-P9.2 peripheral extension helps guide folding of the Tetrahymena ribozyme. Nucl. Acids Res. 24:1996b;854-858.
-
(1996)
Nucl. Acids Res.
, vol.24
, pp. 854-858
-
-
Zarrinkar, P.P.1
Williamson, J.R.2
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