메뉴 건너뛰기




Volumn 12, Issue 9, 2006, Pages 1640-1649

MicroRNAs from the planarian Schmidtea mediterranea: A model system for stem cell biology

Author keywords

MicroRNA; Planarians; Schmidtea mediterranea; Stem cells

Indexed keywords

MICRORNA;

EID: 33748133008     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.117206     Document Type: Article
Times cited : (70)

References (53)
  • 3
    • 4644309196 scopus 로고    scopus 로고
    • The functions of animal microRNAs
    • Ambros, V. 2004. The functions of animal microRNAs. Nature 431: 350-355.
    • (2004) Nature , vol.431 , pp. 350-355
    • Ambros, V.1
  • 8
    • 0037418839 scopus 로고    scopus 로고
    • bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila
    • Brennecke, J., Hipfner, D.R., Stark, A., Russell, R.B., and Cohen, S.M. 2003. bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila. Cell 113: 25-36.
    • (2003) Cell , vol.113 , pp. 25-36
    • Brennecke, J.1    Hipfner, D.R.2    Stark, A.3    Russell, R.B.4    Cohen, S.M.5
  • 9
    • 0346727524 scopus 로고    scopus 로고
    • MicroRNAs modulate hematopoietic lineage differentiation
    • Chen, C.Z., Li, L., Lodish, H.F., and Bartel, D.P. 2004. MicroRNAs modulate hematopoietic lineage differentiation. Science 303: 83-86.
    • (2004) Science , vol.303 , pp. 83-86
    • Chen, C.Z.1    Li, L.2    Lodish, H.F.3    Bartel, D.P.4
  • 13
    • 0344198620 scopus 로고    scopus 로고
    • Transgenic planarian lines obtained by electroporation using transposon-derived vectors and an eye-specific GFP marker
    • Gonzalez-Estevez, C., Momose, T., Gehring, W.J., and Salo, E. 2003. Transgenic planarian lines obtained by electroporation using transposon-derived vectors and an eye-specific GFP marker. Proc. Natl. Acad. Sci. 100: 14046-14051.
    • (2003) Proc. Natl. Acad. Sci. , vol.100 , pp. 14046-14051
    • Gonzalez-Estevez, C.1    Momose, T.2    Gehring, W.J.3    Salo, E.4
  • 16
    • 3042767202 scopus 로고    scopus 로고
    • MicroRNAs: Small RNAs with a big role in gene regulation
    • He, L. and Hannon, G.J. 2004. MicroRNAs: Small RNAs with a big role in gene regulation. Nat. Rev. Genet. 5: 522-531.
    • (2004) Nat. Rev. Genet. , vol.5 , pp. 522-531
    • He, L.1    Hannon, G.J.2
  • 17
    • 0042442335 scopus 로고    scopus 로고
    • Embryonic stem cell-specific MicroRNAs
    • Houbaviy, H.B., Murray, M.F., and Sharp, P.A. 2003. Embryonic stem cell-specific MicroRNAs. Dev. Cell 5: 351-358.
    • (2003) Dev. Cell , vol.5 , pp. 351-358
    • Houbaviy, H.B.1    Murray, M.F.2    Sharp, P.A.3
  • 18
    • 0029933276 scopus 로고    scopus 로고
    • An improved sequence assembly program
    • Huang, X. 1996. An improved sequence assembly program. Genomics 33: 21-31.
    • (1996) Genomics , vol.33 , pp. 21-31
    • Huang, X.1
  • 19
    • 28044457883 scopus 로고    scopus 로고
    • MicroRNAs control translation initiation by inhibiting eukaryotic initiation factor 4E/cap and poly(A) tail function
    • Humphreys, D.T., Westman, B.J., Martin, D.I., and Preiss, T. 2005. MicroRNAs control translation initiation by inhibiting eukaryotic initiation factor 4E/cap and poly(A) tail function. Proc. Natl. Acad. Sci. 102: 16961-16966.
    • (2005) Proc. Natl. Acad. Sci. , vol.102 , pp. 16961-16966
    • Humphreys, D.T.1    Westman, B.J.2    Martin, D.I.3    Preiss, T.4
  • 21
    • 0347357618 scopus 로고    scopus 로고
    • A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans
    • Johnston, R.J. and Hobert, O. 2003. A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans. Nature 426: 845-849.
    • (2003) Nature , vol.426 , pp. 845-849
    • Johnston, R.J.1    Hobert, O.2
  • 22
    • 2942672580 scopus 로고    scopus 로고
    • Computational identification of plant microRNAs and their targets, including a stress-induced miRNA
    • Jones-Rhoades, M.W. and Bartel, D.P. 2004. Computational identification of plant microRNAs and their targets, including a stress-induced miRNA. Mol. Cell 14: 787-799.
    • (2004) Mol. Cell , vol.14 , pp. 787-799
    • Jones-Rhoades, M.W.1    Bartel, D.P.2
  • 23
    • 18344369543 scopus 로고    scopus 로고
    • MicroRNA biogenesis: Coordinated cropping and dicing
    • Kim, V.N. 2005. MicroRNA biogenesis: Coordinated cropping and dicing. Nat. Rev. Mol. Cell Biol. 6: 376-385.
    • (2005) Nat. Rev. Mol. Cell Biol. , vol.6 , pp. 376-385
    • Kim, V.N.1
  • 25
    • 0035955374 scopus 로고    scopus 로고
    • Identification of novel genes coding for small expressed RNAs
    • Lagos-Quintana, M., Rauhut, R., Lendeckel, W., and Tuschl, T. 2001. Identification of novel genes coding for small expressed RNAs. Science 294: 853-858.
    • (2001) Science , vol.294 , pp. 853-858
    • Lagos-Quintana, M.1    Rauhut, R.2    Lendeckel, W.3    Tuschl, T.4
  • 28
    • 0035955361 scopus 로고    scopus 로고
    • An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
    • Lau, N.C., Lim, L.P., Weinstein, E.G., and Bartel, D.P. 2001. An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans. Science 294: 858-862.
    • (2001) Science , vol.294 , pp. 858-862
    • Lau, N.C.1    Lim, L.P.2    Weinstein, E.G.3    Bartel, D.P.4
  • 29
    • 21244448730 scopus 로고    scopus 로고
    • Antisense-mediated depletion reveals essential and specific functions of microRNAs in Drosophila development
    • Leaman, D., Chen, P.Y., Fak, J., Yalcin, A., Pearce, M., Unnerstall, U., Marks, D.S., Sander, C., Tuschl, T., and Gaul, U. 2005. Antisense-mediated depletion reveals essential and specific functions of microRNAs in Drosophila development. Cell 121: 1097-1108.
    • (2005) Cell , vol.121 , pp. 1097-1108
    • Leaman, D.1    Chen, P.Y.2    Fak, J.3    Yalcin, A.4    Pearce, M.5    Unnerstall, U.6    Marks, D.S.7    Sander, C.8    Tuschl, T.9    Gaul, U.10
  • 30
    • 0035955366 scopus 로고    scopus 로고
    • An extensive class of small RNAs in Caenorhabditis elegans
    • Lee, R.C. and Ambros, V. 2001. An extensive class of small RNAs in Caenorhabditis elegans. Science 294: 862-864.
    • (2001) Science , vol.294 , pp. 862-864
    • Lee, R.C.1    Ambros, V.2
  • 31
    • 0027751663 scopus 로고
    • The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
    • Lee, R.C., Feinbaum, R.L., and Ambros, V. 1993. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75: 843-854.
    • (1993) Cell , vol.75 , pp. 843-854
    • Lee, R.C.1    Feinbaum, R.L.2    Ambros, V.3
  • 32
    • 11844278458 scopus 로고    scopus 로고
    • Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    • Lewis, B.P., Burge, C.B., and Bartel, D.P. 2005. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 120: 15-20.
    • (2005) Cell , vol.120 , pp. 15-20
    • Lewis, B.P.1    Burge, C.B.2    Bartel, D.P.3
  • 36
    • 0036255131 scopus 로고    scopus 로고
    • Not your father's planarian: A classic model enters the era of functional genomics
    • Newmark, P.A. and Sánchez Alvarado, A. 2002. Not your father's planarian: A classic model enters the era of functional genomics. Nat. Rev. Genet. 3: 210-219.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 210-219
    • Newmark, P.A.1    Sánchez Alvarado, A.2
  • 37
    • 0141706425 scopus 로고    scopus 로고
    • Ingestion of bacterially expressed double-stranded RNA inhibits gene expression in planarians
    • Newmark, P.A., Reddien, P.W., Cebria, F., and Sánchez Alvarado, A. 2003. Ingestion of bacterially expressed double-stranded RNA inhibits gene expression in planarians. Proc. Natl. Acad. Sci. (Suppl. 1) 100: 11861-11865.
    • (2003) Proc. Natl. Acad. Sci. (Suppl. 1) , vol.100 , pp. 11861-11865
    • Newmark, P.A.1    Reddien, P.W.2    Cebria, F.3    Sánchez Alvarado, A.4
  • 39
    • 32444436121 scopus 로고    scopus 로고
    • Short RNAs repress translation after initiation in mammalian cells
    • Petersen, C.P., Bordeleau, M.E., Pelletier, J., and Sharp, P.A. 2006. Short RNAs repress translation after initiation in mammalian cells. Mol. Cell 21: 533-542.
    • (2006) Mol. Cell , vol.21 , pp. 533-542
    • Petersen, C.P.1    Bordeleau, M.E.2    Pelletier, J.3    Sharp, P.A.4
  • 41
    • 17844395204 scopus 로고    scopus 로고
    • Identification of genes needed for regeneration, stem cell function, and tissue homeostasis by systematic gene perturbation in planaria
    • Reddien, P.W., Bermange, A.L., Murfitt, K.J., Jennings, J.R., and Sánchez Alvarado, A. 2005a. Identification of genes needed for regeneration, stem cell function, and tissue homeostasis by systematic gene perturbation in planaria. Dev. Cell 8: 635-649.
    • (2005) Dev. Cell , vol.8 , pp. 635-649
    • Reddien, P.W.1    Bermange, A.L.2    Murfitt, K.J.3    Jennings, J.R.4    Sánchez Alvarado, A.5
  • 44
    • 29344441657 scopus 로고    scopus 로고
    • Animal evolution and the molecular signature of radiations compressed in time
    • Rokas, A., Kruger, D., and Carroll, S.B. 2005. Animal evolution and the molecular signature of radiations compressed in time. Science 310: 1933-1938.
    • (2005) Science , vol.310 , pp. 1933-1938
    • Rokas, A.1    Kruger, D.2    Carroll, S.B.3
  • 45
    • 31044446936 scopus 로고    scopus 로고
    • Planarian regeneration: Its end is its beginning
    • Sánchez Alvarado, A. 2006. Planarian regeneration: Its end is its beginning. Cell 124: 241-245.
    • (2006) Cell , vol.124 , pp. 241-245
    • Sánchez Alvarado, A.1
  • 46
    • 0036923338 scopus 로고    scopus 로고
    • The Schmidtea mediterranea database as a molecular resource for studying platyhelminthes, stem cells and regeneration
    • Sánchez Alvarado, A., Newmark, P.A., Robb, S.M., and Juste, R. 2002. The Schmidtea mediterranea database as a molecular resource for studying platyhelminthes, stem cells and regeneration. Development 129: 5659-5665.
    • (2002) Development , vol.129 , pp. 5659-5665
    • Sánchez Alvarado, A.1    Newmark, P.A.2    Robb, S.M.3    Juste, R.4
  • 49
    • 33644768174 scopus 로고    scopus 로고
    • Control of translation and mRNA degradation by miRNAs and siRNAs
    • Valencia-Sanchez, M.A., Liu, J., Hannon, G.J., and Parker, R. 2006. Control of translation and mRNA degradation by miRNAs and siRNAs. Genes & Dev. 20: 515-524.
    • (2006) Genes & Dev. , vol.20 , pp. 515-524
    • Valencia-Sanchez, M.A.1    Liu, J.2    Hannon, G.J.3    Parker, R.4
  • 50
    • 15244358503 scopus 로고    scopus 로고
    • Systematic discovery of regulatory motifs in human promoters and 3′ UTRs by comparison of several mammals
    • Xie, X., Lu, J., Kulbokas, E.J., Golub, T.R., Mootha, V., Lindblad-Toh, K., Lander, E.S., and Kellis, M. 2005. Systematic discovery of regulatory motifs in human promoters and 3′ UTRs by comparison of several mammals. Nature 434: 338-345.
    • (2005) Nature , vol.434 , pp. 338-345
    • Xie, X.1    Lu, J.2    Kulbokas, E.J.3    Golub, T.R.4    Mootha, V.5    Lindblad-Toh, K.6    Lander, E.S.7    Kellis, M.8
  • 51
    • 2142654329 scopus 로고    scopus 로고
    • MicroRNA-directed cleavage of HOXB8 mRNA
    • Yekta, S., Shih, I.H., and Bartel, D.P. 2004. MicroRNA-directed cleavage of HOXB8 mRNA. Science 304: 594-596.
    • (2004) Science , vol.304 , pp. 594-596
    • Yekta, S.1    Shih, I.H.2    Bartel, D.P.3
  • 52
    • 29444436838 scopus 로고    scopus 로고
    • The planarian Schmidtea mediterranea as a model for epigenetic germ cell specification: Analysis of ESTs from the hermaphroditic strain
    • Zayas, R.M., Hernandez, A., Habermann, B., Wang, Y., Stary, J.M., and Newmark, P.A. 2005. The planarian Schmidtea mediterranea as a model for epigenetic germ cell specification: Analysis of ESTs from the hermaphroditic strain. Proc. Natl. Acad. Sci. 102: 18491-18496.
    • (2005) Proc. Natl. Acad. Sci. , vol.102 , pp. 18491-18496
    • Zayas, R.M.1    Hernandez, A.2    Habermann, B.3    Wang, Y.4    Stary, J.M.5    Newmark, P.A.6
  • 53
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker, M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31: 3406-3415.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.