-
1
-
-
0001104583
-
-
Riddle D, Blumenthal T, Meyer B, Priess J (Eds). Cold Spring Harbor Laboratory Press, NY, USA
-
Riddle D, Albert P. C. elegans II. Riddle D, Blumenthal T, Meyer B, Priess J (Eds). Cold Spring Harbor Laboratory Press, NY, USA, 739-768 (1997). •• Excellent introductory overview of Caenorhabditis elegans works.
-
(1997)
C. elegans II
, pp. 739-768
-
-
Riddle, D.1
Albert, P.2
-
2
-
-
0034029917
-
Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics
-
Lai CH, Chou CY, Ch'ang LY, Liu CS, Lin W. Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics. Genome Res. 10(5), 703-713 (2000).
-
(2000)
Genome Res.
, vol.10
, Issue.5
, pp. 703-713
-
-
Lai, C.H.1
Chou, C.Y.2
Ch'ang, L.Y.3
Liu, C.S.4
Lin, W.5
-
3
-
-
0037377452
-
Prediction of transcriptional regulation by analysis of the non-coding genome
-
van Helden J. Prediction of transcriptional regulation by analysis of the non-coding genome. Curr. Genomics 4, 217-224 (2003).
-
(2003)
Curr. Genomics
, vol.4
, pp. 217-224
-
-
Van Helden, J.1
-
4
-
-
0032509302
-
Genome sequence of the nematode C. elegans: A platform for investigating biology
-
The C. elegans Sequencing Consortium. Genome sequence of the nematode C. elegans: a platform for investigating biology. Science 282(5396), 2012-2018 (1998).
-
(1998)
Science
, vol.282
, Issue.5396
, pp. 2012-2018
-
-
-
5
-
-
0036338127
-
Alternative splicing and genome complexity
-
Brett D, Pospisil H, Valcarcel J, Reich J, Bork P. Alternative splicing and genome complexity. Nat. Genet. 30, 29-30 (2002).
-
(2002)
Nat. Genet.
, vol.30
, pp. 29-30
-
-
Brett, D.1
Pospisil, H.2
Valcarcel, J.3
Reich, J.4
Bork, P.5
-
6
-
-
0038708337
-
C. elegans ORFeome version 1.1: Experimental verification of the genome annotation and resource for proteome-scale protein expression
-
Reboul J, Vaglio P, Rual JF et al. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Nat. Genet. 34(1), 35-41 (2003).
-
(2003)
Nat. Genet.
, vol.34
, Issue.1
, pp. 35-41
-
-
Reboul, J.1
Vaglio, P.2
Rual, J.F.3
-
7
-
-
0038105344
-
High-throughput expression, purification, and characterization of recombinant Caenorhabditis elegans proteins
-
Huang RY, Boulton SJ, Vidal M et al. High-throughput expression, purification, and characterization of recombinant Caenorhabditis elegans proteins. Biochem. Biophys. Res. Commun. 307(4), 928-934 (2003).
-
(2003)
Biochem. Biophys. Res. Commun.
, vol.307
, Issue.4
, pp. 928-934
-
-
Huang, R.Y.1
Boulton, S.J.2
Vidal, M.3
-
8
-
-
7444250757
-
High-throughput expression of C. elegans proteins
-
Luan CH, Qiu S, Finley JB et al. High-throughput expression of C. elegans proteins. Genome Res. 14(10B), 2102-2110 (2004).
-
(2004)
Genome Res.
, vol.14
, Issue.10 B
, pp. 2102-2110
-
-
Luan, C.H.1
Qiu, S.2
Finley, J.B.3
-
9
-
-
7444220617
-
C. elegans ORFeome version 3.1: Increasing the coverage of ORFeome resources with improved gene predictions
-
Lamesch P, Milstein S, Hao T et al. C. elegans ORFeome version 3.1: increasing the coverage of ORFeome resources with improved gene predictions. Genome Res. 14(10B), 2064-2069 (2004).
-
(2004)
Genome Res.
, vol.14
, Issue.10 B
, pp. 2064-2069
-
-
Lamesch, P.1
Milstein, S.2
Hao, T.3
-
10
-
-
7444261393
-
WormBase as an integrated platform for the C. elegans ORFeome
-
Chen N, Lawson D, Bradnam K et al. WormBase as an integrated platform for the C. elegans ORFeome. Genome Res. 14(10B), 2155-2161 (2004).
-
(2004)
Genome Res.
, vol.14
, Issue.10 B
, pp. 2155-2161
-
-
Chen, N.1
Lawson, D.2
Bradnam, K.3
-
11
-
-
0028328381
-
Analysis of the proteins of aging Caenorhabditis elegans by high resolution two-dimensional gel electrophoresis
-
Vanfleteren JR, De Vreese A. Analysis of the proteins of aging Caenorhabditis elegans by high resolution two-dimensional gel electrophoresis. Electrophoresis 15(2), 289-296 (1994).
-
(1994)
Electrophoresis
, vol.15
, Issue.2
, pp. 289-296
-
-
Vanfleteren, J.R.1
De Vreese, A.2
-
12
-
-
0030987978
-
Two-dimensional gel electrophoresis of Caenorhabditis elegans homogenates and identification of protein spots by microsequencing
-
Bini L, Heid H, Liberatori S et al. Two-dimensional gel electrophoresis of Caenorhabditis elegans homogenates and identification of protein spots by microsequencing. Electrophoresis 18, 557-562 (1997).
-
(1997)
Electrophoresis
, vol.18
, pp. 557-562
-
-
Bini, L.1
Heid, H.2
Liberatori, S.3
-
13
-
-
0034091490
-
Profiling of Caenorhabditis elegans proteins using two-dimensional gel electrophoresis and matrix assisted laser desorption/ionization-time of flight-mass spectrometry
-
Kaji H, Tsuji T, Mawuenyega KG et al. Profiling of Caenorhabditis elegans proteins using two-dimensional gel electrophoresis and matrix assisted laser desorption/ionization-time of flight-mass spectrometry. Electrophoresis 21(9), 1755-1765 (2000).
-
(2000)
Electrophoresis
, vol.21
, Issue.9
, pp. 1755-1765
-
-
Kaji, H.1
Tsuji, T.2
Mawuenyega, K.G.3
-
14
-
-
85047696044
-
A two-dimensional protein map of Caenorhabditis elegans
-
Schrimpf SP, Langen H, Gomes AV et al. A two-dimensional protein map of Caenorhabditis elegans. Electrophoresis 22(6), 1224-1232 (2001).
-
(2001)
Electrophoresis
, vol.22
, Issue.6
, pp. 1224-1232
-
-
Schrimpf, S.P.1
Langen, H.2
Gomes, A.V.3
-
15
-
-
0041358756
-
Mass spectrometric proteome analysis for profiling temperature-dependent changes of protein expression in wild-type Caenorhabditis elegans
-
Madi A, Mikkat S, Ringel B et al. Mass spectrometric proteome analysis for profiling temperature-dependent changes of protein expression in wild-type Caenorhabditis elegans. Proteomics 3(8), 1526-1534 (2003).
-
(2003)
Proteomics
, vol.3
, Issue.8
, pp. 1526-1534
-
-
Madi, A.1
Mikkat, S.2
Ringel, B.3
-
16
-
-
3543115050
-
-
Bantscheff M, Ringel B, Madi A et al. . Proteomics 4(8), 2283-2295 (2004). • Differential proteome analysis and mass spectrometric characterization of germ line development-related proteins of C. elegans.
-
(2004)
Proteomics
, vol.4
, Issue.8
, pp. 2283-2295
-
-
Bantscheff, M.1
Ringel, B.2
Madi, A.3
-
17
-
-
0037274597
-
Large-scale identification of Caenorhabditis elegans proteins by multidimensional liquid chromatography-tandem mass spectrometry
-
Mawuenyega KG, Kaji H, Yamuchi Y et al. Large-scale identification of Caenorhabditis elegans proteins by multidimensional liquid chromatography-tandem mass spectrometry. J. Proteome Res. 2(1), 23-35 (2003).
-
(2003)
J. Proteome Res.
, vol.2
, Issue.1
, pp. 23-35
-
-
Mawuenyega, K.G.1
Kaji, H.2
Yamuchi, Y.3
-
18
-
-
0041706161
-
Metabolic labeling of C. elegans and D. melanogaster for quantitative
-
Krijgsveld J, Ketting RF, Mahmoudi T et al. Metabolic labeling of C. elegans and D. melanogaster for quantitative Proteomics Nat. Biotechnol. 21(8), 927-931 (2003) • First quantitative proteomics for C. elegans using metabolic labeling.
-
(2003)
Proteomics Nat. Biotechnol.
, vol.21
, Issue.8
, pp. 927-931
-
-
Krijgsveld, J.1
Ketting, R.F.2
Mahmoudi, T.3
-
19
-
-
23044449799
-
Proteomic analysis of protein expression profiles during Caenorhabditis elegans development using two-dimensional difference gel electrophoresis
-
Tabuse Y, Nabetani T, Tsugita A. Proteomic analysis of protein expression profiles during Caenorhabditis elegans development using two-dimensional difference gel electrophoresis Proteomics 5(11), 2876-2891 (2005).
-
(2005)
Proteomics
, vol.5
, Issue.11
, pp. 2876-2891
-
-
Tabuse, Y.1
Nabetani, T.2
Tsugita, A.3
-
20
-
-
24944486228
-
An improved method for proteomics studies in C. elegans by fluorogenic derivatization, HPLC isolation, enzymatic digestion and liquid chromatography - Tandem mass spectrometric identification
-
Masuda M, Saimaru H, Takamura N et al. An improved method for proteomics studies in C. elegans by fluorogenic derivatization, HPLC isolation, enzymatic digestion and liquid chromatography - tandem mass spectrometric identification. Biomed. Chromatogr. 19(7), 556-560 (2005).
-
(2005)
Biomed. Chromatogr.
, vol.19
, Issue.7
, pp. 556-560
-
-
Masuda, M.1
Saimaru, H.2
Takamura, N.3
-
21
-
-
0037338365
-
Proteomic analysis of post-translational modifications
-
Mann M, Jensen ON. Proteomic analysis of post-translational modifications. Nat. Biotechnol. 21(3), 255-261 (2003). • Describes a pioneering work on the post-translational modification analysis by mass spectrometry.
-
(2003)
Nat. Biotechnol.
, vol.21
, Issue.3
, pp. 255-261
-
-
Mann, M.1
Jensen, O.N.2
-
23
-
-
1042275615
-
Modification-specific proteomics: Characterization of post-translational modifications by mass spectrometry
-
Jensen ON. Modification-specific proteomics: characterization of post-translational modifications by mass spectrometry. Curr. Opin. Chem. Biol. 8(1), 33-41 (2004).
-
(2004)
Curr. Opin. Chem. Biol.
, vol.8
, Issue.1
, pp. 33-41
-
-
Jensen, O.N.1
-
24
-
-
27644439090
-
Dysregulation of TGF-beta1 receptor activation leads to abnormal lung development and emphysema-like phenotype in core fucose-deficient mice
-
Wang X, Inoue S, Gu J et al. Dysregulation of TGF-beta1 receptor activation leads to abnormal lung development and emphysema-like phenotype in core fucose-deficient mice. Proc. Natl Acad. Sci. USA 102(44), 15791-15796 (2005).
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, Issue.44
, pp. 15791-15796
-
-
Wang, X.1
Inoue, S.2
Gu, J.3
-
25
-
-
0035260267
-
Glycome project: Concept, strategy and preliminary application to Caenorhabditis elegans
-
Hirabayashi J, Arata Y, Kasai K. Glycome project: concept, strategy and preliminary application to Caenorhabditis elegans. Proteomics 1(2), 295-303 (2001).
-
(2001)
Proteomics
, vol.1
, Issue.2
, pp. 295-303
-
-
Hirabayashi, J.1
Arata, Y.2
Kasai, K.3
-
26
-
-
27244435406
-
Identification of the hydrophobic glycoproteins of Caenorhabditis elegans
-
Fan X, She YM, Bagshaw RD, et al. Identification of the hydrophobic glycoproteins of Caenorhabditis elegans. Glycobiology 15(10), 952-964 (2005).
-
(2005)
Glycobiology
, vol.15
, Issue.10
, pp. 952-964
-
-
Fan, X.1
She, Y.M.2
Bagshaw, R.D.3
-
27
-
-
4744361552
-
Protein glycosylation lessons from Caenorhabditis elegans
-
Schachter H. Protein glycosylation lessons from Caenorhabditis elegans. Curr. Opin. Struct. Biol. 14(5), 607-616 (2004).
-
(2004)
Curr. Opin. Struct. Biol.
, vol.14
, Issue.5
, pp. 607-616
-
-
Schachter, H.1
-
28
-
-
4143072608
-
A method for proteomic identification of membrane-bound proteins containing Asn-linked oligosaccharides
-
Fan X, She YM, Bagshaw RD et al. A method for proteomic identification of membrane-bound proteins containing Asn-linked oligosaccharides. Anal. Biochem. 332(1), 178-186 (2004).
-
(2004)
Anal. Biochem.
, vol.332
, Issue.1
, pp. 178-186
-
-
Fan, X.1
She, Y.M.2
Bagshaw, R.D.3
-
30
-
-
31344442047
-
Human Disease Glycomics/Proteome Initiative Workshop and the 4th HUPO Annual Congress
-
Taniguchi N, Nakamura K, Narimatsu H et al. Human Disease Glycomics/Proteome Initiative Workshop and the 4th HUPO Annual Congress. Proteomics 6(1), 12-13 (2006).
-
(2006)
Proteomics
, vol.6
, Issue.1
, pp. 12-13
-
-
Taniguchi, N.1
Nakamura, K.2
Narimatsu, H.3
-
31
-
-
0033885949
-
Measuring gene expression by quantitative proteome analysis
-
Gygi SP, Rist B, Aebersold R. Measuring gene expression by quantitative proteome analysis. Curr. Opin. Biotechnol. 11(4), 396-401 (2000).
-
(2000)
Curr. Opin. Biotechnol.
, vol.11
, Issue.4
, pp. 396-401
-
-
Gygi, S.P.1
Rist, B.2
Aebersold, R.3
-
32
-
-
0037253089
-
Protein arrays: The current state-of-the-art
-
Cutler P. Protein arrays: the current state-of-the-art. Proteomics 3(1), 3-18 (2003).
-
(2003)
Proteomics
, vol.3
, Issue.1
, pp. 3-18
-
-
Cutler, P.1
-
33
-
-
9144264169
-
A map of the interactome network of the metazoan C. elegans
-
Li S, Armstrong CM, Bertin N, et al. A map of the interactome network of the metazoan C. elegans. Science 303(5657), 540-543 (2004).
-
(2004)
Science
, vol.303
, Issue.5657
, pp. 540-543
-
-
Li, S.1
Armstrong, C.M.2
Bertin, N.3
-
34
-
-
0037137446
-
Integrating interactome, phenome, and transcriptome mapping data for the C. elegans germline
-
Walhout AJ, Reboul J, Shtanko O et al. Integrating interactome, phenome, and transcriptome mapping data for the C. elegans germline. Curr. Biol. 12(22), 1952-1958 (2002).
-
(2002)
Curr. Biol.
, vol.12
, Issue.22
, pp. 1952-1958
-
-
Walhout, A.J.1
Reboul, J.2
Shtanko, O.3
-
35
-
-
0001818091
-
Yeast two-hybrid systems and protein interaction mapping projects for yeast and worm
-
Walhout AJ, Boulton SJ, Vidal M. Yeast two-hybrid systems and protein interaction mapping projects for yeast and worm. Yeast 17(2), 88-94 (2000).
-
(2000)
Yeast
, vol.17
, Issue.2
, pp. 88-94
-
-
Walhout, A.J.1
Boulton, S.J.2
Vidal, M.3
-
36
-
-
27644576841
-
High-throughput two-hybrid analysis. the promise and the peril
-
Fields S. High-throughput two-hybrid analysis. The promise and the peril. FEBS J. 272(21), 5391-5393 (2005). •• Offers a clear description of all aspects of yeast two-hybrid systems.
-
(2005)
FEBS J.
, vol.272
, Issue.21
, pp. 5391-5393
-
-
Fields, S.1
-
37
-
-
31044452870
-
Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways
-
Duchaine TF, Wohlschlegel JA, Kennedy S et al. Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Cell 124(2), 343-354 (2006).
-
(2006)
Cell
, vol.124
, Issue.2
, pp. 343-354
-
-
Duchaine, T.F.1
Wohlschlegel, J.A.2
Kennedy, S.3
-
38
-
-
3042718729
-
Dissection of the mammalian midbody proteome reveals conserved cytokinesis mechanisms
-
Skop AR, Liu H, Yates J III et al. Dissection of the mammalian midbody proteome reveals conserved cytokinesis mechanisms. Science 305(5680), 61-66 (2004).
-
(2004)
Science
, vol.305
, Issue.5680
, pp. 61-66
-
-
Skop, A.R.1
Liu, H.2
Yates III, J.3
-
39
-
-
20444364811
-
Model-organism genomics in veterinary parasite drug-discovery
-
Gilleard JS, Woods DJ, Dow JA. Model-organism genomics in veterinary parasite drug-discovery. Trends Parasitol. 21(7), 302-305 (2005).
-
(2005)
Trends Parasitol.
, vol.21
, Issue.7
, pp. 302-305
-
-
Gilleard, J.S.1
Woods, D.J.2
Dow, J.A.3
-
40
-
-
33744503150
-
Using Caenorhabditis elegans as a model for aging and age-related diseases
-
Olsen A, Vantipalli MC, Lithgow GJ. Using Caenorhabditis elegans as a model for aging and age-related diseases. Ann. NY Acad. Sci. 1067, 120-128 (2006).
-
(2006)
Ann. NY Acad. Sci.
, vol.1067
, pp. 120-128
-
-
Olsen, A.1
Vantipalli, M.C.2
Lithgow, G.J.3
-
41
-
-
33646933785
-
A small-molecule screen in C. elegans yields a new calcium channel antagonist
-
Kwok TC, Ricker N, Fraser R et al. A small-molecule screen in C. elegans yields a new calcium channel antagonist. Nature 441(7089), 91-95 (2006).
-
(2006)
Nature
, vol.441
, Issue.7089
, pp. 91-95
-
-
Kwok, T.C.1
Ricker, N.2
Fraser, R.3
-
42
-
-
21344449339
-
Searching new targets for anthelminthic strategies: Interference with glycosphingolipid biosynthesis and phosphorylcholine metabolism affects development of Caenorhabditis elegans
-
Lochnit G, Bongaarts R, Geyer R. Searching new targets for anthelminthic strategies: interference with glycosphingolipid biosynthesis and phosphorylcholine metabolism affects development of Caenorhabditis elegans. Int. J. Parasitol. 35(8), 911-923 (2005).
-
(2005)
Int. J. Parasitol.
, vol.35
, Issue.8
, pp. 911-923
-
-
Lochnit, G.1
Bongaarts, R.2
Geyer, R.3
-
43
-
-
2442560613
-
Prednisone reduces muscle degeneration in dystrophin-deficient Caenorhabditis elegans
-
Gaud A, Simon JM, Witzel T et al. Prednisone reduces muscle degeneration in dystrophin-deficient Caenorhabditis elegans. Neuromuscul. Disord. 14(6), 365-370 (2004).
-
(2004)
Neuromuscul. Disord.
, vol.14
, Issue.6
, pp. 365-370
-
-
Gaud, A.1
Simon, J.M.2
Witzel, T.3
-
44
-
-
1642387712
-
RNAi and siRNA in target validation
-
Jain KK. RNAi and siRNA in target validation. Drug. Discov. Today 9(7), 307-309 (2004).
-
(2004)
Drug. Discov. Today
, vol.9
, Issue.7
, pp. 307-309
-
-
Jain, K.K.1
-
45
-
-
0023494317
-
Screening test for neurotoxins using Caenorhabditis elegans
-
Williams PL, Dusenbery DB. Screening test for neurotoxins using Caenorhabditis elegans. Prog. Clin. Biol. Res. 253, 163-170 (1987).
-
(1987)
Prog. Clin. Biol. Res.
, vol.253
, pp. 163-170
-
-
Williams, P.L.1
Dusenbery, D.B.2
-
46
-
-
0030813398
-
daf-2, an insulin receptor-like gene that regulates longevity and diapause in Caenorhabditis elegans
-
Kimura KD, Tissenbaum HA, Liu Y et al. daf-2, an insulin receptor-like gene that regulates longevity and diapause in Caenorhabditis elegans. Science 277(5328), 942-946 (1997).
-
(1997)
Science
, vol.277
, Issue.5328
, pp. 942-946
-
-
Kimura, K.D.1
Tissenbaum, H.A.2
Liu, Y.3
-
47
-
-
0033985464
-
TGF beta-related pathways. Roles in Caenorhabditis elegans development
-
Patterson GI, Padgett RW. TGF beta-related pathways. Roles in Caenorhabditis elegans development. Trends Genet. 16(1), 27-33 (2000).
-
(2000)
Trends Genet.
, vol.16
, Issue.1
, pp. 27-33
-
-
Patterson, G.I.1
Padgett, R.W.2
-
48
-
-
0036333147
-
DAF-9, a cytochrome P450 regulating C. elegans larval development and adult longevity
-
Jia K, Albert PS, Riddle DL. DAF-9, a cytochrome P450 regulating C. elegans larval development and adult longevity. Development 129(1), 221-231 (2002). •• Demonstrates the involvement of cholesterol-mediated signaling pathway in dauer formation, an important feature in the life cycle of C. elegans.
-
(2002)
Development
, vol.129
, Issue.1
, pp. 221-231
-
-
Jia, K.1
Albert, P.S.2
Riddle, D.L.3
-
49
-
-
2342420089
-
Hormonal signals produced by DAF-9/cytochrome P450 regulate C. elegans dauer diapause in response to environmental cues
-
Gerisch B, Antebi A. Hormonal signals produced by DAF-9/cytochrome P450 regulate C. elegans dauer diapause in response to environmental cues. Development 131(8), 1765-1776 (2004).
-
(2004)
Development
, vol.131
, Issue.8
, pp. 1765-1776
-
-
Gerisch, B.1
Antebi, A.2
-
50
-
-
0043198069
-
Why do worms need cholesterol?
-
Kurzchalia TV, Ward S. Why do worms need cholesterol? Nat. Cell Biol. 5(8), 684-688 (2003). •• Provides a comprehensive view of the role of cholesterol in C. elegans.
-
(2003)
Nat. Cell Biol.
, vol.5
, Issue.8
, pp. 684-688
-
-
Kurzchalia, T.V.1
Ward, S.2
-
51
-
-
0035252804
-
Cholesterol biosynthesis from lanosterol: Molecular cloning, chromosomal localization, functional expression and liver-specific gene regulation of rat sterol delta8-isomerase, a cholesterogenic enzyme with multiple functions
-
Bae S, Seong J, Paik YK. Cholesterol biosynthesis from lanosterol: molecular cloning, chromosomal localization, functional expression and liver-specific gene regulation of rat sterol delta8-isomerase, a cholesterogenic enzyme with multiple functions. Biochem. J. 353, 689-699 (2001).
-
(2001)
Biochem. J.
, vol.353
, pp. 689-699
-
-
Bae, S.1
Seong, J.2
Paik, Y.K.3
-
52
-
-
0032987971
-
Mutations in the gene encoding 3 beta-hydroxysteroid-delta 8, delta 7-isomerase cause X-linked dominant Conradi-Hunermann syndrome
-
Braverman N, Lin P, Moebius FF et al. Mutations in the gene encoding 3 beta-hydroxysteroid-delta 8, delta 7-isomerase cause X-linked dominant Conradi-Hunermann syndrome. Nat. Genet. 22, 291-294 (1999).
-
(1999)
Nat. Genet.
, vol.22
, pp. 291-294
-
-
Braverman, N.1
Lin, P.2
Moebius, F.F.3
-
53
-
-
0032863254
-
Biochemistry and function of nematode steroids
-
Chitwood DJ. Biochemistry and function of nematode steroids. Crit. Rev. Biochem. Mol. Biol. 34, 273-284 (1999). •• Most extensive review on the molecular aspect of sterols in C. elegans.
-
(1999)
Crit. Rev. Biochem. Mol. Biol.
, vol.34
, pp. 273-284
-
-
Chitwood, D.J.1
-
54
-
-
13744249412
-
Cholesterol-producing transgenic Caenorhabditis elegans lives longer due to newly acquired enhanced stress resistance
-
Lee EY, Shim YH, Chitwood DJ et al. Cholesterol-producing transgenic Caenorhabditis elegans lives longer due to newly acquired enhanced stress resistance. Biochem. Biophys. Res. Commun. 328(4), 929-936 (2005).
-
(2005)
Biochem. Biophys. Res. Commun.
, vol.328
, Issue.4
, pp. 929-936
-
-
Lee, E.Y.1
Shim, Y.H.2
Chitwood, D.J.3
-
55
-
-
0030949124
-
Functional rafts in cell membranes
-
Simons K, Ikonen E. Functional rafts in cell membranes. Nature 387(6633), 569-572 (1997).
-
(1997)
Nature
, vol.387
, Issue.6633
, pp. 569-572
-
-
Simons, K.1
Ikonen, E.2
-
56
-
-
0033000965
-
A gp330/megalin-related protein is required in the major epidermis of Caenorhabditis elegans for completion of molting
-
Yochem J, Tuck S, Greenwald I, Han M. A gp330/megalin-related protein is required in the major epidermis of Caenorhabditis elegans for completion of molting. Development 126(3), 597-606 (1999).
-
(1999)
Development
, vol.126
, Issue.3
, pp. 597-606
-
-
Yochem, J.1
Tuck, S.2
Greenwald, I.3
Han, M.4
-
57
-
-
0033147405
-
Involvement of caveolin-1 in meiotic cell-cycle progression in Caenorhabditis elegans
-
Scheel J, Srinivasan J, Honnert U et al. Involvement of caveolin-1 in meiotic cell-cycle progression in Caenorhabditis elegans. Nat. Cell Biol. 1(2), 127-129 (1999).
-
(1999)
Nat. Cell Biol.
, vol.1
, Issue.2
, pp. 127-129
-
-
Scheel, J.1
Srinivasan, J.2
Honnert, U.3
-
58
-
-
0029021421
-
Three genes of the MAP kinase cascade, mek-2, mpk-1/sur-1 and let-60 ras, are required for meiotic cell cycle progression in Caenorhabditis elegans
-
Church DL, Guan KL, Lambie EJ. Three genes of the MAP kinase cascade, mek-2, mpk-1/sur-1 and let-60 ras, are required for meiotic cell cycle progression in Caenorhabditis elegans. Development 121, 2525-2535 (1995).
-
(1995)
Development
, vol.121
, pp. 2525-2535
-
-
Church, D.L.1
Guan, K.L.2
Lambie, E.J.3
-
59
-
-
0036369719
-
Requirement of functional ryanodine receptor type 3 for astrocyte migration
-
Matyash M, Matyash V, Nolte C et al. Requirement of functional ryanodine receptor type 3 for astrocyte migration. FASEB J. 16(1), 84-86 (2002).
-
(2002)
FASEB J.
, vol.16
, Issue.1
, pp. 84-86
-
-
Matyash, M.1
Matyash, V.2
Nolte, C.3
-
60
-
-
0028332103
-
Function of the her-1 gene is required for maintenance of male differentiation in adult tissues of C. elegans
-
Schedin P, Jonas P, Wood WB Function of the her-1 gene is required for maintenance of male differentiation in adult tissues of C. elegans. Dev. Genet. 15(3), 231-239 (1994).
-
(1994)
Dev. Genet.
, vol.15
, Issue.3
, pp. 231-239
-
-
Schedin, P.1
Jonas, P.2
Wood, W.B.3
-
61
-
-
0033792318
-
Cholesterol binds to synaptophysin and is required for biogenesis of synaptic vesicles
-
Thiele C, Hannah MJ, Fahrenholz F et al. Cholesterol binds to synaptophysin and is required for biogenesis of synaptic vesicles. Nat. Cell Biol. 2(1), 42-49 (2000).
-
(2000)
Nat. Cell Biol.
, vol.2
, Issue.1
, pp. 42-49
-
-
Thiele, C.1
Hannah, M.J.2
Fahrenholz, F.3
-
62
-
-
33646042547
-
Identification of ligands for DAF-12 that govern dauer formation and reproduction in C. elegans
-
Motola DL, Cummins CL, Rottiers V et al. Identification of ligands for DAF-12 that govern dauer formation and reproduction in C. elegans. Cell 124(6), 1209-1223 (2006). •• Landmark paper describing the discovery of ketosteroid molecules as DAF-12 ligands.
-
(2006)
Cell
, vol.124
, Issue.6
, pp. 1209-1223
-
-
Motola, D.L.1
Cummins, C.L.2
Rottiers, V.3
-
63
-
-
0034699331
-
CHE-14, a protein with a sterol-sensing domain, is required for apical sorting in C. elegans ectodermal epithelial cells
-
Michaux G, Gansmuller A, Hindelang C et al. CHE-14, a protein with a sterol-sensing domain, is required for apical sorting in C. elegans ectodermal epithelial cells. Curr. Biol. 10(18), 1098-1107 (2000).
-
(2000)
Curr. Biol.
, vol.10
, Issue.18
, pp. 1098-1107
-
-
Michaux, G.1
Gansmuller, A.2
Hindelang, C.3
-
64
-
-
1642524289
-
Proteomic changes during disturbance of cholesterol metabolism by azacoprostane treatment in Caenorhabditis elegans
-
Choi BK, Chitwood DJ, Paik YK. Proteomic changes during disturbance of cholesterol metabolism by azacoprostane treatment in Caenorhabditis elegans. Mol. Cell. Proteomics 2(10), 1086-1095 (2003). •• This paper describes the proteomic analysis of disturbance of the cholesterol-mediated signaling pathway with regard to cellular and molecular regulation of cholesterol in C. elegans.
-
(2003)
Mol. Cell. Proteomics
, vol.2
, Issue.10
, pp. 1086-1095
-
-
Choi, B.K.1
Chitwood, D.J.2
Paik, Y.K.3
-
65
-
-
0021015563
-
Novel nuclear methylation of sterols by the nematode Caenorhabditis elegans
-
Chitwood DJ, Lusby WR, Lozano R, Thompson MJ, Svoboda JA. Novel nuclear methylation of sterols by the nematode Caenorhabditis elegans. Steroids 42, 311-319 (1983).
-
(1983)
Steroids
, vol.42
, pp. 311-319
-
-
Chitwood, D.J.1
Lusby, W.R.2
Lozano, R.3
Thompson, M.J.4
Svoboda, J.A.5
-
66
-
-
13444251248
-
Chemical structure and biological activity of the Caenorhabditis elegans dauer-inducing pheromone
-
Jeong PY, Jung M, Yim YH et al. Chemical structure and biological activity of the Caenorhabditis elegans dauer-inducing pheromone. Nature 433(7025), 541-545 (2005). •• Landmark paper describing the molecular identity of the dauer-inducing pheromone.
-
(2005)
Nature
, vol.433
, Issue.7025
, pp. 541-545
-
-
Jeong, P.Y.1
Jung, M.2
Yim, Y.H.3
-
67
-
-
0036159054
-
Role of cholesterol in germ-line development of Caenorhabditis elegans
-
Shim YH, Chun JH, Lee EY et al. Role of cholesterol in germ-line development of Caenorhabditis elegans. Mol. Reprod. Dev. 61(3), 358-366 (2002). • Demonstrates that cholesterol is essential for germ-line development in C. elegans.
-
(2002)
Mol. Reprod. Dev.
, vol.61
, Issue.3
, pp. 358-366
-
-
Shim, Y.H.1
Chun, J.H.2
Lee, E.Y.3
-
68
-
-
4244023406
-
Caveolin, cholesterol and Ras signaling
-
Sternberg PW, Schmid SL. Caveolin, cholesterol and Ras signaling. Nat. Cell Biol. 1(2), E35-E37 (1999).
-
(1999)
Nat. Cell Biol.
, vol.1
, Issue.2
-
-
Sternberg, P.W.1
Schmid, S.L.2
-
69
-
-
0033885209
-
C. elegans patched gene, ptc-1, functions in germ-line cytokinesis
-
Kuwabara PE, Lee MH, Schedl T et al. C. elegans patched gene, ptc-1, functions in germ-line cytokinesis. Genes Dev. 14(15), 1933-1944 (2000).
-
(2000)
Genes Dev.
, vol.14
, Issue.15
, pp. 1933-1944
-
-
Kuwabara, P.E.1
Lee, M.H.2
Schedl, T.3
-
70
-
-
0345600235
-
Redox regulation of germline and vulval development in Caenorhabditis elegans
-
Shibata Y, Branicky R, Landaverde IO et al. Redox regulation of germline and vulval development in Caenorhabditis elegans. Science 302(5651), 1779-1782 (2003).
-
(2003)
Science
, vol.302
, Issue.5651
, pp. 1779-1782
-
-
Shibata, Y.1
Branicky, R.2
Landaverde, I.O.3
-
71
-
-
0033639116
-
A global profile of germline gene expression in C. elegans
-
Reinke V, Smith HE, Nance J et al. A global profile of germline gene expression in C. elegans. Mol. Cell. 6(3), 605-616 (2000). •• Marks the first comprehensive genomic analysis of the C. elegans germline.
-
(2000)
Mol. Cell.
, vol.6
, Issue.3
, pp. 605-616
-
-
Reinke, V.1
Smith, H.E.2
Nance, J.3
-
72
-
-
0033920189
-
Proteomics to display lovastatin-induced protein and pathway regulation in rat liver
-
Steiner S, Gatlin CL, Lennon JJ et al. Proteomics to display lovastatin-induced protein and pathway regulation in rat liver. Electrophoresis 21(11), 2129-2137 (2000).
-
(2000)
Electrophoresis
, vol.21
, Issue.11
, pp. 2129-2137
-
-
Steiner, S.1
Gatlin, C.L.2
Lennon, J.J.3
-
73
-
-
0035977914
-
Cholesterol biosynthesis regulation and protein changes in rat liver following treatment with fluvastatin
-
Steiner S, Gatlin CL, Lennon JJ, et al. Cholesterol biosynthesis regulation and protein changes in rat liver following treatment with fluvastatin. Toxicol. Lett. 120(1-3), 369-377 (2001).
-
(2001)
Toxicol. Lett.
, vol.120
, Issue.1-3
, pp. 369-377
-
-
Steiner, S.1
Gatlin, C.L.2
Lennon, J.J.3
-
74
-
-
1242339569
-
Proteomic analysis of diet-induced hypercholesterolemic mice
-
Park JY, Seong JK, Paik YK. Proteomic analysis of diet-induced hypercholesterolemic mice. Proteomics 4(2), 514-523 (2004).
-
(2004)
Proteomics
, vol.4
, Issue.2
, pp. 514-523
-
-
Park, J.Y.1
Seong, J.K.2
Paik, Y.K.3
-
75
-
-
0033887451
-
Identifying the proteome: Software tools
-
Fenyo D. Identifying the proteome: software tools. Curr. Opin. Biotechnol. 11(4), 391-395 (2000).
-
(2000)
Curr. Opin. Biotechnol.
, vol.11
, Issue.4
, pp. 391-395
-
-
Fenyo, D.1
-
76
-
-
0033968614
-
The yeast proteome database (YPD) and Caenorhabditis elegans proteome database (WormPD): Comprehensive resources for the organization and comparison of model organism protein information
-
Costanzo MC, Hogan JD, Cusick ME et al. The yeast proteome database (YPD) and Caenorhabditis elegans proteome database (WormPD): comprehensive resources for the organization and comparison of model organism protein information. Nucleic Acids Res. 28(1), 73-76 (2000).
-
(2000)
Nucleic Acids Res.
, vol.28
, Issue.1
, pp. 73-76
-
-
Costanzo, M.C.1
Hogan, J.D.2
Cusick, M.E.3
-
77
-
-
0034747024
-
PombePD and WormPD: Model organism volumes of the BioKnowledge library, an integrated resource for protein information
-
Costanzo MC, Crawford ME, Hirschman JE et al. PombePD and WormPD: model organism volumes of the BioKnowledge library, an integrated resource for protein information. Nucleic Acids Res. 29(1), 75-79 (2001).
-
(2001)
Nucleic Acids Res.
, vol.29
, Issue.1
, pp. 75-79
-
-
Costanzo, M.C.1
Crawford, M.E.2
Hirschman, J.E.3
-
78
-
-
13444304365
-
Integr8 and Genome Reviews: Integrated views of complete genomes and proteomes
-
Kersey P, Bower L, Morris L et al. Integr8 and Genome Reviews: integrated views of complete genomes and proteomes. Nucleic Acids Res. 33(Database issue), D297-D302 (2005).
-
(2005)
Nucleic Acids Res.
, vol.33
, Issue.DATABASE ISSUE
-
-
Kersey, P.1
Bower, L.2
Morris, L.3
-
79
-
-
33644873213
-
The Universal Protein Resource (UniProt): An expanding universe of protein information
-
Wu CH, Apweiler R, Bairoch A et al. The Universal Protein Resource (UniProt): an expanding universe of protein information. Nucleic Acids Res. 34(Database issue), D187-D191 (2006).
-
(2006)
Nucleic Acids Res.
, vol.34
, Issue.DATABASE ISSUE
-
-
Wu, C.H.1
Apweiler, R.2
Bairoch, A.3
-
80
-
-
13444282474
-
InterPro, progress and status in 2005
-
Mulder NJ, Apweiler R, Attwood TK et al. InterPro, progress and status in 2005. Nucleic Acids Res. 33(Database issue), D201-D205 (2005).
-
(2005)
Nucleic Acids Res.
, vol.33
, Issue.DATABASE ISSUE
-
-
Mulder, N.J.1
Apweiler, R.2
Attwood, T.K.3
-
81
-
-
0037250525
-
Improvements to CluSTr: The database of SWISS-PROT+TrEMBL protein clusters
-
Kriventseva EV, Servant F, Apweiler R. Improvements to CluSTr: the database of SWISS-PROT+TrEMBL protein clusters. Nucleic Acids Res. 31(1), 388-389 (2003).
-
(2003)
Nucleic Acids Res.
, vol.31
, Issue.1
, pp. 388-389
-
-
Kriventseva, E.V.1
Servant, F.2
Apweiler, R.3
-
82
-
-
9144252016
-
The Gene Ontology Annotation (GOA) Database: Sharing knowledge in Uniprot with Gene Ontology
-
Camon E, Magrane M, Barrell D et al. The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology. Nucleic Acids Res. 32(Database issue), D262-D266 (2004).
-
(2004)
Nucleic Acids Res.
, vol.32
, Issue.DATABASE ISSUE
-
-
Camon, E.1
Magrane, M.2
Barrell, D.3
-
83
-
-
20444456581
-
Automatic annotation of protein function
-
Valencia A. Automatic annotation of protein function. Curr. Opin. Struct. Biol. 15(3), 267-274 (2005).
-
(2005)
Curr. Opin. Struct. Biol.
, vol.15
, Issue.3
, pp. 267-274
-
-
Valencia, A.1
-
84
-
-
0036226603
-
BLAT - The BLAST-like alignment tool
-
Kent WJ. BLAT - the BLAST-like alignment tool. Genome Res. 12(4), 656-664 (2002).
-
(2002)
Genome Res.
, vol.12
, Issue.4
, pp. 656-664
-
-
Kent, W.J.1
-
85
-
-
0033958091
-
The GeneQuiz web server: Protein functional analysis through the Web
-
Hoersch S, Leroy C, Brown NP et al. The GeneQuiz web server: protein functional analysis through the Web. Trends Biochem. Sci. 25(1), 33-35 (2000).
-
(2000)
Trends Biochem. Sci.
, vol.25
, Issue.1
, pp. 33-35
-
-
Hoersch, S.1
Leroy, C.2
Brown, N.P.3
-
86
-
-
0347093598
-
Prediction of protein subcellular locations using fuzzy k-NN method
-
Huang Y, Li Y. Prediction of protein subcellular locations using fuzzy k-NN method. Bioinformatics 20(1), 21-28 (2004).
-
(2004)
Bioinformatics
, vol.20
, Issue.1
, pp. 21-28
-
-
Huang, Y.1
Li, Y.2
-
87
-
-
0023046815
-
A new method for predicting signal sequence cleavage sites
-
von Heijne G. A new method for predicting signal sequence cleavage sites. Nucleic Acids Res. 14(11), 4683-4690 (1986).
-
(1986)
Nucleic Acids Res.
, vol.14
, Issue.11
, pp. 4683-4690
-
-
Von Heijne, G.1
-
88
-
-
28644447919
-
Identification of post-translational modifications by blind search of mass spectra
-
Tsur D, Tanner S, Bafna ZE et al. Identification of post-translational modifications by blind search of mass spectra. Nat. Biotechnol. 23(12), 1562-1567 (2005).
-
(2005)
Nat. Biotechnol.
, vol.23
, Issue.12
, pp. 1562-1567
-
-
Tsur, D.1
Tanner, S.2
Bafna, Z.E.3
-
89
-
-
22544465253
-
SPIDER: Software for protein identification from sequence tags with de novo sequencing error
-
Han Y, Ma B, Zhang K. SPIDER: software for protein identification from sequence tags with de novo sequencing error. J. Bioinform. Comput. Biol. 3(3), 697-716 (2005).
-
(2005)
J. Bioinform. Comput. Biol.
, vol.3
, Issue.3
, pp. 697-716
-
-
Han, Y.1
Ma, B.2
Zhang, K.3
-
90
-
-
1942423061
-
High-throughput identification of proteins and unanticipated sequence modifications using a mass-based alignment algorithm for MS/MS de novo sequencing results
-
Searle BC, Dasari S, Turner M et al. High-throughput identification of proteins and unanticipated sequence modifications using a mass-based alignment algorithm for MS/MS de novo sequencing results. Anal. Chem. 76(8), 2220-2230 (2004).
-
(2004)
Anal. Chem.
, vol.76
, Issue.8
, pp. 2220-2230
-
-
Searle, B.C.1
Dasari, S.2
Turner, M.3
-
91
-
-
13644257223
-
Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites
-
Julenius K, Molgaard A, Gupta R et al. Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites. Glycobiology 15(2), 153-164 (2005).
-
(2005)
Glycobiology
, vol.15
, Issue.2
, pp. 153-164
-
-
Julenius, K.1
Molgaard, A.2
Gupta, R.3
-
92
-
-
0036088133
-
DIP, the Database of Interacting Proteins: A research tool for studying cellular networks of protein interactions
-
Xenarios I, Salwinski L, Duan XJ et al. DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions. Nucleic Acids Res. 30(1), 303-305 (2002).
-
(2002)
Nucleic Acids Res.
, vol.30
, Issue.1
, pp. 303-305
-
-
Xenarios, I.1
Salwinski, L.2
Duan, X.J.3
-
94
-
-
0037245913
-
BIND: The Biomolecular Interaction Network Database
-
Bader GD, Betel D, Hogue CW. BIND: the Biomolecular Interaction Network Database. Nucleic Acids Res. 31(1), 248-250 (2003).
-
(2003)
Nucleic Acids Res.
, vol.31
, Issue.1
, pp. 248-250
-
-
Bader, G.D.1
Betel, D.2
Hogue, C.W.3
-
95
-
-
0037174638
-
Systems biology. Life's complexity pyramid
-
Oltvai ZN, Barabasi AL. Systems biology. Life's complexity pyramid. Science 298(5594), 763-764 (2002).
-
(2002)
Science
, vol.298
, Issue.5594
, pp. 763-764
-
-
Oltvai, Z.N.1
Barabasi, A.L.2
-
96
-
-
23744481400
-
What do we learn from high-throughput protein interaction data?
-
Titz B, Schlesner M, Uetz P. What do we learn from high-throughput protein interaction data? Expert Rev. Proteomics 1(1), 111-121 (2004).
-
(2004)
Expert Rev. Proteomics
, vol.1
, Issue.1
, pp. 111-121
-
-
Titz, B.1
Schlesner, M.2
Uetz, P.3
-
97
-
-
3042569597
-
Annotation transfer between genomes: Protein-protein interologs and protein-DNA regulogs
-
Yu H, Luscombe NM, Lu HX et al. Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs. Genome Res. 14(6), 1107-1118 (2004).
-
(2004)
Genome Res.
, vol.14
, Issue.6
, pp. 1107-1118
-
-
Yu, H.1
Luscombe, N.M.2
Lu, H.X.3
-
98
-
-
33747176095
-
-
Website 101 Wellcome Trust - Sanger Institute www.sanger.ac.uk/projects/ c.elegans/wormpep
-
-
-
|