-
1
-
-
0000527581
-
Organellar Evolution
-
Edited by: Roberts DM, Sharp P, Alderson G and Collins MA. Cambridge, U.K., Cambridge University Press
-
Gray MW, Spencer DF: Organellar Evolution. In Evolution of Microbial Life Volume 54. Edited by: Roberts DM, Sharp P, Alderson G and Collins MA. Cambridge, U.K., Cambridge University Press; 1996:109-126.
-
(1996)
Evolution of Microbial Life Volume 54
, vol.54
, pp. 109-126
-
-
Gray, M.W.1
Spencer, D.F.2
-
2
-
-
0037471677
-
Genomic reduction and evolution of novel genetic membranes and protein-targeting machinery in eukaryote-eukaryote chimaeras (meta-algae)
-
Cavalier-Smith T: Genomic reduction and evolution of novel genetic membranes and protein-targeting machinery in eukaryote-eukaryote chimaeras (meta-algae). Philos Trans R Soc Lond B Biol Sci 2003, 358:109-33; discussion 133-4.
-
(2003)
Philos Trans R Soc Lond B Biol Sci
, vol.358
, pp. 109-133
-
-
Cavalier-Smith, T.1
-
3
-
-
0036843244
-
Recycled plastids: A 'green movement' in eukaryotic evolution
-
Archibald JM, Keeling PJ: Recycled plastids: a 'green movement' in eukaryotic evolution. Trends Genet 2002, 18:577-584.
-
(2002)
Trends Genet
, vol.18
, pp. 577-584
-
-
Archibald, J.M.1
Keeling, P.J.2
-
4
-
-
0002160837
-
Gene transfer from organelles to the nucleus: How much, what happens, and why?
-
Martin W, Herrmann RG: Gene transfer from organelles to the nucleus: How much, what happens, and why? Plant Physiology 1998, 118:9-17.
-
(1998)
Plant Physiology
, vol.118
, pp. 9-17
-
-
Martin, W.1
Herrmann, R.G.2
-
5
-
-
0037686300
-
Comparative genomics. Plant genomes: Cyanobacterial genes revealed
-
Archibald JM, Keeling PJ: Comparative genomics. Plant genomes: cyanobacterial genes revealed. Heredity 2003, 90:2-3.
-
(2003)
Heredity
, vol.90
, pp. 2-3
-
-
Archibald, J.M.1
Keeling, P.J.2
-
6
-
-
3042769418
-
Cyanobacterial genes transmitted to the nucleus before divergence of red algae in the chromista
-
Nozaki H, Matsuzaki M, Misumi O, Kuroiwa H, Hasegawa M, Higashiyama T, Shin T, Kohara Y, Ogasawara N, Kuroiwa T: Cyanobacterial genes transmitted to the nucleus before divergence of red algae in the chromista. Journal of Molecular Evolution 2004, 59:103-113.
-
(2004)
Journal of Molecular Evolution
, vol.59
, pp. 103-113
-
-
Nozaki, H.1
Matsuzaki, M.2
Misumi, O.3
Kuroiwa, H.4
Hasegawa, M.5
Higashiyama, T.6
Shin, T.7
Kohara, Y.8
Ogasawara, N.9
Kuroiwa, T.10
-
7
-
-
0035953753
-
The highly reduced genome of an enslaved algal nucleus
-
Douglas S, Zauner S, Fraunholz M, Beaton M, Penny S, Deng LT, Wu X, Reith M, Cavalier-Smith T, Maier UG: The highly reduced genome of an enslaved algal nucleus. Nature 2001, 410:1091-1096.
-
(2001)
Nature
, vol.410
, pp. 1091-1096
-
-
Douglas, S.1
Zauner, S.2
Fraunholz, M.3
Beaton, M.4
Penny, S.5
Deng, L.T.6
Wu, X.7
Reith, M.8
Cavalier-Smith, T.9
Maier, U.G.10
-
8
-
-
33745476746
-
Complete nucleotide sequence of the chlorarachniophyte nucleomorph
-
in press
-
Gilson P, Mollard V, Slamovits CH, Reith M, Keeling PJ, McFadden G: Complete nucleotide sequence of the chlorarachniophyte nucleomorph. Proc Natl Acad Sci U S A 2006, in press:.
-
(2006)
Proc Natl Acad Sci U S A
-
-
Gilson, P.1
Mollard, V.2
Slamovits, C.H.3
Reith, M.4
Keeling, P.J.5
McFadden, G.6
-
9
-
-
0031081427
-
Good things in small packages: The tiny genomes of chlorarachniophyte endosymbionts
-
Gilson PR, McFadden GI: Good things in small packages: the tiny genomes of chlorarachniophyte endosymbionts. Bioessays 1997, 19:167-173.
-
(1997)
Bioessays
, vol.19
, pp. 167-173
-
-
Gilson, P.R.1
McFadden, G.I.2
-
10
-
-
0036021692
-
Jam packed genomes - A preliminary, comparative analysis of nucleomorphs
-
Gilson PR, McFadden GI: Jam packed genomes - a preliminary, comparative analysis of nucleomorphs. Genetica 2002, 115:13-28.
-
(2002)
Genetica
, vol.115
, pp. 13-28
-
-
Gilson, P.R.1
McFadden, G.I.2
-
11
-
-
33744929620
-
Protein Targeting into the Complex Plastid of Cryptophytes
-
in press
-
Gould SV, Sommer MS, Hadfi K, Zauner S, Kroth P, Maier UG: Protein Targeting into the Complex Plastid of Cryptophytes. Journal of Molecular Evolution 2006, in press:.
-
(2006)
Journal of Molecular Evolution
-
-
Gould, S.V.1
Sommer, M.S.2
Hadfi, K.3
Zauner, S.4
Kroth, P.5
Maier, U.G.6
-
12
-
-
16644376535
-
Comment on "The evolution of modern eukaryotic phytoplankton"
-
author reply 2191
-
Keeling PJ, Archibald JM, Fast NM, Palmer JD: Comment on "The evolution of modern eukaryotic phytoplankton". Science 2004, 306:2191; author reply 2191.
-
(2004)
Science
, vol.306
, pp. 2191
-
-
Keeling, P.J.1
Archibald, J.M.2
Fast, N.M.3
Palmer, J.D.4
-
13
-
-
1942540780
-
A brief history of plastids and their hosts
-
Keeling P: A brief history of plastids and their hosts. Protist 2004, 155:3-7.
-
(2004)
Protist
, vol.155
, pp. 3-7
-
-
Keeling, P.1
-
14
-
-
3142664643
-
The evolution of modern eukaryotic phytoplankton
-
Falkowski PG, Katz ME, Knoll AH, Quigg A, Raven JA, Schofield O, Taylor FJ: The evolution of modern eukaryotic phytoplankton. Science 2004, 305:354-360.
-
(2004)
Science
, vol.305
, pp. 354-360
-
-
Falkowski, P.G.1
Katz, M.E.2
Knoll, A.H.3
Quigg, A.4
Raven, J.A.5
Schofield, O.6
Taylor, F.J.7
-
15
-
-
0032955849
-
Topology of Euglena chloroplast protein precursors within endoplasmic reticulum to Golgi to chloroplast transport vesicles
-
Sulli C, Fang Z, Muchhal U, Schwartzbach SD: Topology of Euglena chloroplast protein precursors within endoplasmic reticulum to Golgi to chloroplast transport vesicles. J Biol Chem 1999, 274:457-463.
-
(1999)
J Biol Chem
, vol.274
, pp. 457-463
-
-
Sulli, C.1
Fang, Z.2
Muchhal, U.3
Schwartzbach, S.D.4
-
16
-
-
0038714278
-
Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans
-
Archibald JM, Rogers MB, Toop M, Ishida K, Keeling PJ: Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans. Proceedings of the National Academy of Sciences of the United States of America 2003, 100:7678-7683.
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, pp. 7678-7683
-
-
Archibald, J.M.1
Rogers, M.B.2
Toop, M.3
Ishida, K.4
Keeling, P.J.5
-
17
-
-
0035103466
-
Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids
-
Fast NM, Kissinger JC, Roos DS, Keeling PJ: Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids. Molecular Biology and Evolution 2001, 18:418-426.
-
(2001)
Molecular Biology and Evolution
, vol.18
, pp. 418-426
-
-
Fast, N.M.1
Kissinger, J.C.2
Roos, D.S.3
Keeling, P.J.4
-
18
-
-
0344440735
-
Nucleus-encoded, plastid-targeted glyceraldehyde-3-phosphate dehydrogenase (GAPDH) indicates a single origin for chromalveolate plastids
-
Harper JT, Keeling PJ: Nucleus-encoded, plastid-targeted glyceraldehyde-3-phosphate dehydrogenase (GAPDH) indicates a single origin for chromalveolate plastids. Mol Biol Evol 2003, 20:1730-1735.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 1730-1735
-
-
Harper, J.T.1
Keeling, P.J.2
-
19
-
-
6344265521
-
Gene replacement of fructose-1,6-bisphosphate aldolase supports the hypothesis of a single photosynthetic ancestor of chromalveolates
-
Patron NJ, Rogers MB, Keeling PJ: Gene replacement of fructose-1,6-bisphosphate aldolase supports the hypothesis of a single photosynthetic ancestor of chromalveolates. Eukaryotic Cell 2004, 3:1169-1175.
-
(2004)
Eukaryotic Cell
, vol.3
, pp. 1169-1175
-
-
Patron, N.J.1
Rogers, M.B.2
Keeling, P.J.3
-
20
-
-
0031663016
-
A revised six-kingdom system of life
-
Cavalier-Smith T: A revised six-kingdom system of life. Biological Reviews 1998, 73:203-266.
-
(1998)
Biological Reviews
, vol.73
, pp. 203-266
-
-
Cavalier-Smith, T.1
-
21
-
-
0035936144
-
Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi
-
Katinka MD, Duprat S, Cornillot E, Metenier G, Thomarat F, Prensier G, Barbe V, Peyretaillade E, Brottier P, Wincker P, Delbac F, El Alaoui H, Peyret P, Saurin W, Gouy M, Weissenbach J, Vivares CP: Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Nature 2001, 414:450-453.
-
(2001)
Nature
, vol.414
, pp. 450-453
-
-
Katinka, M.D.1
Duprat, S.2
Cornillot, E.3
Metenier, G.4
Thomarat, F.5
Prensier, G.6
Barbe, V.7
Peyretaillade, E.8
Brottier, P.9
Wincker, P.10
Delbac, F.11
El Alaoui, H.12
Peyret, P.13
Saurin, W.14
Gouy, M.15
Weissenbach, J.16
Vivares, C.P.17
-
22
-
-
23344449276
-
A high frequency of overlapping gene expression in compacted eukaryotic genomes
-
Williams BA, Slamovits CH, Patron NJ, Fast NM, Keeling PJ: A high frequency of overlapping gene expression in compacted eukaryotic genomes. Proc Natl Acad Sci U S A 2005, 102:10936-10941.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 10936-10941
-
-
Williams, B.A.1
Slamovits, C.H.2
Patron, N.J.3
Fast, N.M.4
Keeling, P.J.5
-
23
-
-
21144432943
-
The Wolbachia genome of Brugia malayi: Endosymbiont evolution within a human pathogenic nematode
-
Foster J, Ganatra M, Kamal I, Ware J, Makarova K, Ivanova N, Bhattacharyya A, Kapatral V, Kumar S, Posfai J, Vincze T, Ingram J, Moran L, Lapidus A, Omelchenko M, Kyrpides N, Ghedin E, Wang S, Goltsman E, Joukov V, Ostrovskaya O, Tsukerman K, Mazur M, Comb D, Koonin E, Slatko B: The Wolbachia genome of Brugia malayi: endosymbiont evolution within a human pathogenic nematode. PLoS Biol 2005, 3:e121.
-
(2005)
PLoS Biol
, vol.3
-
-
Foster, J.1
Ganatra, M.2
Kamal, I.3
Ware, J.4
Makarova, K.5
Ivanova, N.6
Bhattacharyya, A.7
Kapatral, V.8
Kumar, S.9
Posfai, J.10
Vincze, T.11
Ingram, J.12
Moran, L.13
Lapidus, A.14
Omelchenko, M.15
Kyrpides, N.16
Ghedin, E.17
Wang, S.18
Goltsman, E.19
Joukov, V.20
Ostrovskaya, O.21
Tsukerman, K.22
Mazur, M.23
Comb, D.24
Koonin, E.25
Slatko, B.26
more..
-
24
-
-
19344372961
-
The annotated genome of Wolbachia from the filarial nematode Brugia malayi: What it means for progress in antifilarial medicine
-
Pfarr K, Hoerauf A: The annotated genome of Wolbachia from the filarial nematode Brugia malayi: what it means for progress in antifilarial medicine. PLoS Med 2005, 2:e110.
-
(2005)
PLoS Med
, vol.2
-
-
Pfarr, K.1
Hoerauf, A.2
-
25
-
-
19344369385
-
Genome Sequence of the Intracellular Bacterium Wolbachia
-
Genome Sequence of the Intracellular Bacterium Wolbachia. PLoS Biol 2004, 2:E76.
-
(2004)
PLoS Biol
, vol.2
-
-
-
26
-
-
0034618559
-
Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS
-
Shigenobu S, Watanabe H, Hattori M, Sakaki Y, Ishikawa H: Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS. Nature 2000, 407:81-86.
-
(2000)
Nature
, vol.407
, pp. 81-86
-
-
Shigenobu, S.1
Watanabe, H.2
Hattori, M.3
Sakaki, Y.4
Ishikawa, H.5
-
27
-
-
0036842986
-
Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia
-
Akman L, Yamashita A, Watanabe H, Oshima K, Shiba T, Hattori M, Aksoy S: Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia. Nat Genet 2002, 32:402-407.
-
(2002)
Nat Genet
, vol.32
, pp. 402-407
-
-
Akman, L.1
Yamashita, A.2
Watanabe, H.3
Oshima, K.4
Shiba, T.5
Hattori, M.6
Aksoy, S.7
-
28
-
-
0036667441
-
Small genome of Candidatus Blochmannia, the bacterial endosymbiont of Camponotus, implies irreversible specialization to an intracellular lifestyle
-
Wernegreen JJ, Lazarus AB, Degnan PH: Small genome of Candidatus Blochmannia, the bacterial endosymbiont of Camponotus, implies irreversible specialization to an intracellular lifestyle. Microbiology 2002, 148:2551-2556.
-
(2002)
Microbiology
, vol.148
, pp. 2551-2556
-
-
Wernegreen, J.J.1
Lazarus, A.B.2
Degnan, P.H.3
-
30
-
-
19344376238
-
Endosymbiosis: Lessons in conflict resolution
-
Wernegreen JJ: Endosymbiosis: Lessons in conflict resolution. Plos Biology 2004, 2:307-311.
-
(2004)
Plos Biology
, vol.2
, pp. 307-311
-
-
Wernegreen, J.J.1
-
31
-
-
0037384544
-
Why are the genomes of endosymbiotic bacteria so stable?
-
Silva FJ, Latorre A, Moya A: Why are the genomes of endosymbiotic bacteria so stable? Trends in Genetics 2003, 19:176-180.
-
(2003)
Trends in Genetics
, vol.19
, pp. 176-180
-
-
Silva, F.J.1
Latorre, A.2
Moya, A.3
-
32
-
-
20444395428
-
Gene expression levels influence amino acid usage and evolutionary rates in endosymbiotic bacteria
-
Schaber J, Rispe C, Wernegreen J, Buness A, Delmotte F, Silva FJ, Moya A: Gene expression levels influence amino acid usage and evolutionary rates in endosymbiotic bacteria. Gene 2005, 352:109-117.
-
(2005)
Gene
, vol.352
, pp. 109-117
-
-
Schaber, J.1
Rispe, C.2
Wernegreen, J.3
Buness, A.4
Delmotte, F.5
Silva, F.J.6
Moya, A.7
-
33
-
-
0347135951
-
Mutational and selective pressures on codon and amino acid usage in Buchnera, endosymbiotic bacteria of aphids
-
Rispe C, Delmotte F, van Ham R, Moya A: Mutational and selective pressures on codon and amino acid usage in Buchnera, endosymbiotic bacteria of aphids. Genome Research 2004, 14:44-53.
-
(2004)
Genome Research
, vol.14
, pp. 44-53
-
-
Rispe, C.1
Delmotte, F.2
Van Ham, R.3
Moya, A.4
-
34
-
-
0032948901
-
Evidence for genetic drift in endosymbionts (Buchnera): Analyses of protein-coding genes
-
Wernegreen JJ, Moran NA: Evidence for genetic drift in endosymbionts (Buchnera): Analyses of protein-coding genes. Molecular Biology and Evolution 1999, 16:83-97.
-
(1999)
Molecular Biology and Evolution
, vol.16
, pp. 83-97
-
-
Wernegreen, J.J.1
Moran, N.A.2
-
35
-
-
0035986891
-
Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution
-
Birdsell JA: Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution. Molecular Biology and Evolution 2002, 19:1181-1197.
-
(2002)
Molecular Biology and Evolution
, vol.19
, pp. 1181-1197
-
-
Birdsell, J.A.1
-
36
-
-
0030590259
-
Complete gene map of the plastid-like DNA of the malaria parasite Plasmodium falciparum
-
Wilson RJ, Denny PW, Preiser PR, Rangachari K, Roberts K, Roy A, Whyte A, Strath M, Moore DJ, Moore PW, Williamson DH: Complete gene map of the plastid-like DNA of the malaria parasite Plasmodium falciparum. J Mol Biol 1996, 261:155-172.
-
(1996)
J Mol Biol
, vol.261
, pp. 155-172
-
-
Wilson, R.J.1
Denny, P.W.2
Preiser, P.R.3
Rangachari, K.4
Roberts, K.5
Roy, A.6
Whyte, A.7
Strath, M.8
Moore, D.J.9
Moore, P.W.10
Williamson, D.H.11
-
37
-
-
0037015614
-
Genome sequence of the human malaria parasite Plasmodium falciparum
-
Gardner MJ, Hall N, Fung E, White O, Berriman M, Hyman RW, Carlton JM, Pain A, Nelson KE, Bowman S, Paulsen IT, James K, Eisen JA, Rutherford K, Salzberg SL, Craig A, Kyes S, Chan MS, Nene V, Shallom SJ, Suh B, Peterson J, Angiuoli S, Pertea M, Allen J, Selengut J, Haft D, Mather MW, Vaidya AB, Martin DM, Fairlamb AH, Fraunholz MJ, Roos DS, Ralph SA, McFadden GI, Cummings LM, Subramanian GM, Mungall C, Venter JC, Carucci DJ, Hoffman SL, Newbold C, Davis RW, Fraser CM, Barrell B: Genome sequence of the human malaria parasite Plasmodium falciparum. Nature 2002, 419:498-511.
-
(2002)
Nature
, vol.419
, pp. 498-511
-
-
Gardner, M.J.1
Hall, N.2
Fung, E.3
White, O.4
Berriman, M.5
Hyman, R.W.6
Carlton, J.M.7
Pain, A.8
Nelson, K.E.9
Bowman, S.10
Paulsen, I.T.11
James, K.12
Eisen, J.A.13
Rutherford, K.14
Salzberg, S.L.15
Craig, A.16
Kyes, S.17
Chan, M.S.18
Nene, V.19
Shallom, S.J.20
Suh, B.21
Peterson, J.22
Angiuoli, S.23
Pertea, M.24
Allen, J.25
Selengut, J.26
Haft, D.27
Mather, M.W.28
Vaidya, A.B.29
Martin, D.M.30
Fairlamb, A.H.31
Fraunholz, M.J.32
Roos, D.S.33
Ralph, S.A.34
McFadden, G.I.35
Cummings, L.M.36
Subramanian, G.M.37
Mungall, C.38
Venter, J.C.39
Carucci, D.J.40
Hoffman, S.L.41
Newbold, C.42
Davis, R.W.43
Fraser, C.M.44
Barrell, B.45
more..
-
38
-
-
24944514808
-
Proteome composition in Plasmodium falciparum: Higher usage of GC-rich nonsynonymous codons in highly expressed genes
-
Chanda I, Pan A, Dutta C: Proteome composition in Plasmodium falciparum: Higher usage of GC-rich nonsynonymous codons in highly expressed genes. Journal of Molecular Evolution 2005, 61:513-523.
-
(2005)
Journal of Molecular Evolution
, vol.61
, pp. 513-523
-
-
Chanda, I.1
Pan, A.2
Dutta, C.3
-
39
-
-
1842555142
-
The effect of expression levels on codon usage in Plasmodium falciparum
-
Peixoto L, Fernandez V, Musto H: The effect of expression levels on codon usage in Plasmodium falciparum. Parasitology 2004, 128:245-251.
-
(2004)
Parasitology
, vol.128
, pp. 245-251
-
-
Peixoto, L.1
Fernandez, V.2
Musto, H.3
-
40
-
-
11144354393
-
Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D
-
Matsuzaki M, Misumi O, Shin-I T, Maruyama S, Takahara M, Miyagishima SY, Mori T, Nishida K, Yagisawa F, Yoshida Y, Nishimura Y, Nakao S, Kobayashi T, Momoyama Y, Higashiyama T, Minoda A, Sano M, Nomoto H, Oishi K, Hayashi H, Ohta F, Nishizaka S, Haga S, Miura S, Morishita T, Kabeya Y, Terasawa K, Suzuki Y, Ishii Y, Asakawa S, Takano H, Ohta N, Kuroiwa H, Tanaka K, Shimizu N, Sugano S, Sato N, Nozaki H, Ogasawara N, Kohara Y, Kuroiwa T: Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Nature 2004, 428:653-657.
-
(2004)
Nature
, vol.428
, pp. 653-657
-
-
Matsuzaki, M.1
Misumi, O.2
Shin-I, T.3
Maruyama, S.4
Takahara, M.5
Miyagishima, S.Y.6
Mori, T.7
Nishida, K.8
Yagisawa, F.9
Yoshida, Y.10
Nishimura, Y.11
Nakao, S.12
Kobayashi, T.13
Momoyama, Y.14
Higashiyama, T.15
Minoda, A.16
Sano, M.17
Nomoto, H.18
Oishi, K.19
Hayashi, H.20
Ohta, F.21
Nishizaka, S.22
Haga, S.23
Miura, S.24
Morishita, T.25
Kabeya, Y.26
Terasawa, K.27
Suzuki, Y.28
Ishii, Y.29
Asakawa, S.30
Takano, H.31
Ohta, N.32
Kuroiwa, H.33
Tanaka, K.34
Shimizu, N.35
Sugano, S.36
Sato, N.37
Nozaki, H.38
Ogasawara, N.39
Kohara, Y.40
Kuroiwa, T.41
more..
-
42
-
-
0002394924
-
Cryptomonad nuclear and nucleomorph 18S rRNA phylogeny
-
CavalierSmith T, Couch JA, Thorsteinsen KE, Gilson P, Deane JA, Hill DRA, McFadden GI: Cryptomonad nuclear and nucleomorph 18S rRNA phylogeny. European Journal of Phycology 1996, 31:315-328.
-
(1996)
European Journal of Phycology
, vol.31
, pp. 315-328
-
-
Cavaliersmith, T.1
Couch, J.A.2
Thorsteinsen, K.E.3
Gilson, P.4
Deane, J.A.5
Hill, D.R.A.6
McFadden, G.I.7
-
43
-
-
0034980698
-
Molecular chaperones encoded by a reduced nucleus: The cryptomonad nucleomorph
-
Archibald JM, Cavalier-Smith T, Maier U, Douglas S: Molecular chaperones encoded by a reduced nucleus: the cryptomonad nucleomorph. J Mol Evol 2001, 52:490-501.
-
(2001)
J Mol Evol
, vol.52
, pp. 490-501
-
-
Archibald, J.M.1
Cavalier-Smith, T.2
Maier, U.3
Douglas, S.4
-
44
-
-
0032819620
-
The secondary endosymbiont of the cryptomonad Guillardia theta contains alpha-, beta-, and gamma-tubulin genes
-
Keeling PJ, Deane JA, Hink-Schauer C, Douglas SE, Maier UG, McFadden GI: The secondary endosymbiont of the cryptomonad Guillardia theta contains alpha-, beta-, and gamma-tubulin genes. Mol Biol Evol 1999, 16:1308-1313.
-
(1999)
Mol Biol Evol
, vol.16
, pp. 1308-1313
-
-
Keeling, P.J.1
Deane, J.A.2
Hink-Schauer, C.3
Douglas, S.E.4
Maier, U.G.5
McFadden, G.I.6
-
45
-
-
0029798360
-
Substitution rate calibration of small subunit ribosomal RNA identifies chlorarachniophyte endosymbionts as remnants of green algae
-
VanDePeer Y, Rensing SA, Maier UG, DeWachter R: Substitution rate calibration of small subunit ribosomal RNA identifies chlorarachniophyte endosymbionts as remnants of green algae. Proceedings of the National Academy of Sciences of the United States of America 1996, 93:7732-7736.
-
(1996)
Proceedings of the National Academy of Sciences of the United States of America
, vol.93
, pp. 7732-7736
-
-
Vandepeer, Y.1
Rensing, S.A.2
Maier, U.G.3
DeWachter, R.4
-
46
-
-
0032900424
-
The plastid genome of the cryptophyte alga, Guillardia theta: Complete sequence and conserved synteny groups confirm its common ancestry with red algae
-
Douglas SE, Penny SL: The plastid genome of the cryptophyte alga, Guillardia theta: complete sequence and conserved synteny groups confirm its common ancestry with red algae. J Mol Evol 1999, 48:236-244.
-
(1999)
J Mol Evol
, vol.48
, pp. 236-244
-
-
Douglas, S.E.1
Penny, S.L.2
-
47
-
-
5344249429
-
Plastid-targeting peptides from the chlorarachniophyte Bigelowiella natans
-
Rogers MB, Archibald JM, Field MA, Li C, Striepen B, Keeling PJ: Plastid-targeting peptides from the chlorarachniophyte Bigelowiella natans. Journal of Eukaryotic Microbiology 2004, 51:529-535.
-
(2004)
Journal of Eukaryotic Microbiology
, vol.51
, pp. 529-535
-
-
Rogers, M.B.1
Archibald, J.M.2
Field, M.A.3
Li, C.4
Striepen, B.5
Keeling, P.J.6
-
49
-
-
17544368557
-
Complex protein targeting to dinoflagellate plastids
-
Patron NJ, Waller RF, Archibald JM, Keeling PJ: Complex protein targeting to dinoflagellate plastids. J Mol Biol 2005, 348:1015-1024.
-
(2005)
J Mol Biol
, vol.348
, pp. 1015-1024
-
-
Patron, N.J.1
Waller, R.F.2
Archibald, J.M.3
Keeling, P.J.4
-
50
-
-
29344449390
-
Common evolutionary origin of starch biosynthetic enzymes in green and red algae
-
Patron NJ, Keeling PJ: Common evolutionary origin of starch biosynthetic enzymes in green and red algae. Journal of Phycology 2005, 41:1131-1141.
-
(2005)
Journal of Phycology
, vol.41
, pp. 1131-1141
-
-
Patron, N.J.1
Keeling, P.J.2
-
52
-
-
33744638372
-
Why genes persist in organelle genomes
-
Daley DO, Whelan J: Why genes persist in organelle genomes. Genome Biology 2005, 6:.
-
(2005)
Genome Biology
, vol.6
-
-
Daley, D.O.1
Whelan, J.2
-
53
-
-
0015927177
-
Generation time and genomic evolution in primates
-
Sarich VM, Wilson AC: Generation time and genomic evolution in primates. Science 1973, 179:1144-1147.
-
(1973)
Science
, vol.179
, pp. 1144-1147
-
-
Sarich, V.M.1
Wilson, A.C.2
-
54
-
-
0000378875
-
Evidence for higher rates of nucleotide substitution in rodents than in man
-
Wu CI, Li WH: Evidence for higher rates of nucleotide substitution in rodents than in man. Proc Natl Acad Sci U S A 1985, 82:1741-1745.
-
(1985)
Proc Natl Acad Sci U S A
, vol.82
, pp. 1741-1745
-
-
Wu, C.I.1
Li, W.H.2
-
55
-
-
0034129663
-
RRTree: Relative-Rate Tests between groups of sequences on a phylogenetic tree
-
Robinson-Rechavi M, Huchon D: RRTree: Relative-Rate Tests between groups of sequences on a phylogenetic tree. Bioinformatics 2000, 16:296-297.
-
(2000)
Bioinformatics
, vol.16
, pp. 296-297
-
-
Robinson-Rechavi, M.1
Huchon, D.2
-
56
-
-
14544293086
-
Nonhomogeneous model of sequence evolution indicates independent origins of primary endosymbionts within the enterobacteriales (gamma-Proteobacteria)
-
Herbeck JT, Degnan PH, Wernegreen JJ: Nonhomogeneous model of sequence evolution indicates independent origins of primary endosymbionts within the enterobacteriales (gamma-Proteobacteria). Mol Biol Evol 2005, 22:520-532.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 520-532
-
-
Herbeck, J.T.1
Degnan, P.H.2
Wernegreen, J.J.3
-
57
-
-
0028803018
-
Genetics, Physiology, and Evolutionary Relationships of the Genus Buchnera - Intracellular Symbionts of Aphids
-
Baumann P, Baumann L, Lai CY, Roubakhsh D, Moran NA, Clark MA: Genetics, Physiology, and Evolutionary Relationships of the Genus Buchnera - Intracellular Symbionts of Aphids. Annual Review of Microbiology 1995, 49:55-94.
-
(1995)
Annual Review of Microbiology
, vol.49
, pp. 55-94
-
-
Baumann, P.1
Baumann, L.2
Lai, C.Y.3
Roubakhsh, D.4
Moran, N.A.5
Clark, M.A.6
-
58
-
-
0031813884
-
Analysis of plastid DNA-like sequences within the nuclear genomes of higher plants
-
Ayliffe MA, Scott NS, Timmis JN: Analysis of plastid DNA-like sequences within the nuclear genomes of higher plants. Molecular Biology and Evolution 1998, 15:738-745.
-
(1998)
Molecular Biology and Evolution
, vol.15
, pp. 738-745
-
-
Ayliffe, M.A.1
Scott, N.S.2
Timmis, J.N.3
-
59
-
-
19844382575
-
Generation and evolutionary fate of insertions of organelle DNA in the nuclear genomes of flowering plants
-
Noutsos C, Richly E, Leister D: Generation and evolutionary fate of insertions of organelle DNA in the nuclear genomes of flowering plants. Genome Research 2005, 15:616-628.
-
(2005)
Genome Research
, vol.15
, pp. 616-628
-
-
Noutsos, C.1
Richly, E.2
Leister, D.3
-
60
-
-
4944253274
-
NUPTs in sequenced eukaryotes and their genomic organization in relation to NUMTs
-
Richly E, Leister D: NUPTs in sequenced eukaryotes and their genomic organization in relation to NUMTs. Molecular Biology and Evolution 2004, 21:1972-1980.
-
(2004)
Molecular Biology and Evolution
, vol.21
, pp. 1972-1980
-
-
Richly, E.1
Leister, D.2
-
62
-
-
38949085672
-
Insight into the Diversity and Evolution of the Cryptomonad Nucleomorph Genome
-
Lane CE, Khan H, Mackinnon M, Fong A, Theophilou S, Archibald JM: Insight into the Diversity and Evolution of the Cryptomonad Nucleomorph Genome. Mol Biol Evol 2005.
-
(2005)
Mol Biol Evol
-
-
Lane, C.E.1
Khan, H.2
Mackinnon, M.3
Fong, A.4
Theophilou, S.5
Archibald, J.M.6
-
63
-
-
0033615372
-
Complete structure of the chloroplast genome of Arabidopsis thaliana
-
Sato S, Nakamura Y, Kaneko T, Asamizu E, Tabata S: Complete structure of the chloroplast genome of Arabidopsis thaliana. DNA Res 1999, 6:283-290.
-
(1999)
DNA Res
, vol.6
, pp. 283-290
-
-
Sato, S.1
Nakamura, Y.2
Kaneko, T.3
Asamizu, E.4
Tabata, S.5
-
64
-
-
0037572303
-
Complete sequence and analysis of the plastid genome of the unicellular red alga Cyanidioschyzon merolae
-
Ohta N, Matsuzaki M, Misumi O, Miyagishima SY, Nozaki H, Tanaka K, Shin IT, Kohara Y, Kuroiwa T: Complete sequence and analysis of the plastid genome of the unicellular red alga Cyanidioschyzon merolae. DNA Res 2003, 10:67-77.
-
(2003)
DNA Res
, vol.10
, pp. 67-77
-
-
Ohta, N.1
Matsuzaki, M.2
Misumi, O.3
Miyagishima, S.Y.4
Nozaki, H.5
Tanaka, K.6
Shin, I.T.7
Kohara, Y.8
Kuroiwa, T.9
-
65
-
-
51249166895
-
The chloroplast genome of a chlorophyll a+c-containing alga, Odontella sinensis
-
Kowallik KV, Stoebe B, Schaffran I, KrothPancic P, Freier U: The chloroplast genome of a chlorophyll a+c-containing alga, Odontella sinensis. Plant Molecular Biology Reporter 1995, 13:336-342.
-
(1995)
Plant Molecular Biology Reporter
, vol.13
, pp. 336-342
-
-
Kowallik, K.V.1
Stoebe, B.2
Schaffran, I.3
KrothPancic, P.4
Freier, U.5
-
66
-
-
6044252163
-
The genome of the diatom Thalassiosira pseudonana: Ecology, evolution, and metabolism
-
Armbrust EV, Berges JA, Bowler C, Green BR, Martinez D, Putnam NH, Zhou SG, Allen AE, Apt KE, Bechner M, Brzezinski MA, Chaal BK, Chiovitti A, Davis AK, Demarest MS, Detter JC, Glavina T, Goodstein D, Hadi MZ, Hellsten U, Hildebrand M, Jenkins BD, Jurka J, Kapitonov VV, Kroger N, Lau WWY, Lane TW, Larimer FW, Lippmeier JC, Lucas S, Medina M, Montsant A, Obornik M, Parker MS, Palenik B, Pazour GJ, Richardson PM, Rynearson TA, Saito MA, Schwartz DC, Thamatrakoln K, Valentin K, Vardi A, Wilkerson FP, Rokhsar DS: The genome of the diatom Thalassiosira pseudonana: Ecology, evolution, and metabolism. Science 2004, 306:79-86.
-
(2004)
Science
, vol.306
, pp. 79-86
-
-
Armbrust, E.V.1
Berges, J.A.2
Bowler, C.3
Green, B.R.4
Martinez, D.5
Putnam, N.H.6
Zhou, S.G.7
Allen, A.E.8
Apt, K.E.9
Bechner, M.10
Brzezinski, M.A.11
Chaal, B.K.12
Chiovitti, A.13
Davis, A.K.14
Demarest, M.S.15
Detter, J.C.16
Glavina, T.17
Goodstein, D.18
Hadi, M.Z.19
Hellsten, U.20
Hildebrand, M.21
Jenkins, B.D.22
Jurka, J.23
Kapitonov, V.V.24
Kroger, N.25
Lau, W.W.Y.26
Lane, T.W.27
Larimer, F.W.28
Lippmeier, J.C.29
Lucas, S.30
Medina, M.31
Montsant, A.32
Obornik, M.33
Parker, M.S.34
Palenik, B.35
Pazour, G.J.36
Richardson, P.M.37
Rynearson, T.A.38
Saito, M.A.39
Schwartz, D.C.40
Thamatrakoln, K.41
Valentin, K.42
Vardi, A.43
Wilkerson, F.P.44
Rokhsar, D.S.45
more..
-
67
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 2000, 408:796-815.
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
68
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG: The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 1997, 25:4876-4882.
-
(1997)
Nucleic Acids Research
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
69
-
-
0742296788
-
Maximum-Likelihood Analysis Using TREE_PUZZLE
-
Edited by: Baxevanis DB, RDM D, G P, G S and L S. New York, Wiley and Sons
-
Schmidt HA, Hasseler A: Maximum-Likelihood Analysis Using TREE_PUZZLE. In Current Protocols in Bioinformatics Volume Unit 6.6. Edited by: Baxevanis DB, RDM D, G P, G S and L S. New York, Wiley and Sons; 2003.
-
(2003)
Current Protocols in Bioinformatics Volume Unit 6.6
-
-
Schmidt, H.A.1
Hasseler, A.2
|