-
1
-
-
0037154011
-
A cyanobacterial gene in nonphotosynthetic protists - An early chloroplast acquisition in eukaryotes?
-
Andersson, J. O., and A. J. Roger. 2002. A cyanobacterial gene in nonphotosynthetic protists - an early chloroplast acquisition in eukaryotes? Curr. Biol. 12:115-119.
-
(2002)
Curr. Biol.
, vol.12
, pp. 115-119
-
-
Andersson, J.O.1
Roger, A.J.2
-
2
-
-
0036843244
-
Recycled plastids: A green movement in eukaryotic evolution
-
Archibald, J. M., and P. J. Keeling. 2002. Recycled plastids: a green movement in eukaryotic evolution. Trends Genet. 18:577-584.
-
(2002)
Trends Genet.
, vol.18
, pp. 577-584
-
-
Archibald, J.M.1
Keeling, P.J.2
-
3
-
-
0034602344
-
A kingdom-level phylogeny of eukaryotes based on combined protein data
-
Baldauf, S. L., A. J. Roger, I. Wenk-Siefert, and W. F. Doolittle. 2000. A kingdom-level phylogeny of eukaryotes based on combined protein data. Science 290:972-977.
-
(2000)
Science
, vol.290
, pp. 972-977
-
-
Baldauf, S.L.1
Roger, A.J.2
Wenk-Siefert, I.3
Doolittle, W.F.4
-
4
-
-
0034991149
-
Phylogenetic relationships among algae based on complete large-subunit rRNA sequences
-
Ben Ali, A., R. De Baere, G. Van der Auwera, R. De Wachter, and Y. Van de Peer. 2001. Phylogenetic relationships among algae based on complete large-subunit rRNA sequences. Int. J. System. Evol. Microbiol. 51:737-749.
-
(2001)
Int. J. System. Evol. Microbiol.
, vol.51
, pp. 737-749
-
-
Ben Ali, A.1
De Baere, R.2
Van Der Auwera, G.3
De Wachter, R.4
Van De Peer, Y.5
-
5
-
-
0033167106
-
The non-photosynthetic plastid in malarial parasites and other apicomplexans is derived from outside the green plastid lineage
-
Blanchard, J. L., and J. S. Hicks. 1999. The non-photosynthetic plastid in malarial parasites and other apicomplexans is derived from outside the green plastid lineage. J. Eukaryot. Microbiol. 46:367-375.
-
(1999)
J. Eukaryot. Microbiol.
, vol.46
, pp. 367-375
-
-
Blanchard, J.L.1
Hicks, J.S.2
-
6
-
-
0033984609
-
Weighted neighbor joining: A likelihood-based approach to distance-based phylogeny reconstruction
-
Bruno, W. J., N. D. Socci, and A. L. Halpern. 2000. Weighted neighbor joining: a likelihood-based approach to distance-based phylogeny reconstruction. Mol. Biol. Evol. 17:189-97.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 189-197
-
-
Bruno, W.J.1
Socci, N.D.2
Halpern, A.L.3
-
8
-
-
0032838597
-
Principles of protein and lipid targeting in secondary symbiogenesis: Euglenoid, dinoflagellate, and sporozoan plastid origins and the eukaryote family tree
-
_. 1999. Principles of protein and lipid targeting in secondary symbiogenesis: euglenoid, dinoflagellate, and sporozoan plastid origins and the eukaryote family tree. J. Eukaryot. Microbiol. 46:347-366.
-
(1999)
J. Eukaryot. Microbiol.
, vol.46
, pp. 347-366
-
-
-
9
-
-
0037471677
-
Genomic reduction and evolution of novel genetic membranes and protein-targeting machinery in eukaryote-eukaryote chimeras (meta-algae)
-
_. 2003. Genomic reduction and evolution of novel genetic membranes and protein-targeting machinery in eukaryote-eukaryote chimeras (meta-algae). Philos. Trans. R. Soc. Lond. B Biol. Sci. 358:109-134.
-
(2003)
Philos. Trans. R. Soc. Lond. B Biol. Sci.
, vol.358
, pp. 109-134
-
-
-
10
-
-
0027383390
-
Determinants of coenzyme specificity in glyceraldehyde-3-phosphate dehydrogenase: Role of the acidic residue in the fingerprint region of the nucleotide binding fold
-
Clermont, S., C. Corbier, Y. Mely, D. Gerard, A. Wonacott, and G. Branlant. 1993. Determinants of coenzyme specificity in glyceraldehyde-3- phosphate dehydrogenase: role of the acidic residue in the fingerprint region of the nucleotide binding fold. Biochemistry 32:10178-10184.
-
(1993)
Biochemistry
, vol.32
, pp. 10178-10184
-
-
Clermont, S.1
Corbier, C.2
Mely, Y.3
Gerard, D.4
Wonacott, A.5
Branlant, G.6
-
11
-
-
0036269480
-
Analyses of RNA Polymerase II genes from free-living protists: Phylogeny, long branch attraction, and the eukaryotic big bang
-
Dacks, J. B., A. Marinets, W. F. Doolittle, T. Cavalier-Smith, and J. M. Logsdon, Jr. 2002. Analyses of RNA Polymerase II genes from free-living protists: phylogeny, long branch attraction, and the eukaryotic big bang. Mol. Biol. Evol. 19:830-840.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 830-840
-
-
Dacks, J.B.1
Marinets, A.2
Doolittle, W.F.3
Cavalier-Smith, T.4
Logsdon Jr., J.M.5
-
12
-
-
0030830235
-
Phylogenetic analyses of the rbcL sequences from haptophytes and heterokont algae suggest their chloroplasts are unrelated
-
Daugbjerg, N., and R. A. Andersen. 1997. Phylogenetic analyses of the rbcL sequences from haptophytes and heterokont algae suggest their chloroplasts are unrelated. Mol. Biol. Evol. 14:1242-1251.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 1242-1251
-
-
Daugbjerg, N.1
Andersen, R.A.2
-
13
-
-
0036633494
-
Phylogenetic analysis indicates multiple origins of chloroplast glyceraldehyde-3-phosphate dehydrogenase genes in dinoflagellates
-
Fagan, T. M., and J. W. Hastings. 2002. Phylogenetic analysis indicates multiple origins of chloroplast glyceraldehyde-3-phosphate dehydrogenase genes in dinoflagellates. Mol. Biol. Evol. 19:1203-1207.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1203-1207
-
-
Fagan, T.M.1
Hastings, J.W.2
-
14
-
-
0032434097
-
The phylogeny of glyceraldehyde-3-phosphate dehydrogenase indicates lateral gene transfer from cryptomonads to dinoflagellates
-
Fagan, T., J. W. Hastings, and D. Morse. 1998. The phylogeny of glyceraldehyde-3-phosphate dehydrogenase indicates lateral gene transfer from cryptomonads to dinoflagellates. J. Mol. Evol. 47:633-639.
-
(1998)
J. Mol. Evol.
, vol.47
, pp. 633-639
-
-
Fagan, T.1
Hastings, J.W.2
Morse, D.3
-
15
-
-
0035103466
-
Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids
-
Fast, N. M., J. C. Kissinger, D. S. Roos, and P. J. Keeling. 2001. Nuclear-encoded, plastid-targeted genes suggest a single common origin for apicomplexan and dinoflagellate plastids. Mol. Biol. Evol. 18:418-426.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 418-426
-
-
Fast, N.M.1
Kissinger, J.C.2
Roos, D.S.3
Keeling, P.J.4
-
16
-
-
0036124759
-
Reexamining alveolate evolution using multiple protein molecular phylogenies
-
Fast, N. M., L. Xue, S. Bingham, and P. J. Keeling. 2002. Reexamining alveolate evolution using multiple protein molecular phylogenies. J. Eukaryot. Microbiol. 49:30-37.
-
(2002)
J. Eukaryot. Microbiol.
, vol.49
, pp. 30-37
-
-
Fast, N.M.1
Xue, L.2
Bingham, S.3
Keeling, P.J.4
-
17
-
-
0003437299
-
-
Distributed by the author, Department of Genetics, University of Washington, Seattle
-
Felsenstein, J. 1993. PHYLIP (phylogeny inference package). Version 3.5c. Distributed by the author, Department of Genetics, University of Washington, Seattle.
-
(1993)
PHYLIP (Phylogeny Inference Package). Version 3.5c
-
-
Felsenstein, J.1
-
18
-
-
0037073846
-
A green algal apicoplast ancestor
-
Funes, S., E. Davidson, A. Reyes-Prieto, S. Magallón, P. Herion, M. P. King, and D. Gonzalez-Halphen. 2002. A green algal apicoplast ancestor. Science 298:2155.
-
(2002)
Science
, vol.298
, pp. 2155
-
-
Funes, S.1
Davidson, E.2
Reyes-Prieto, A.3
Magallón, S.4
Herion, P.5
King, M.P.6
Gonzalez-Halphen, D.7
-
19
-
-
0037015614
-
Genome sequence of the human malaria parasite Plasmodium falciparum
-
Gardner, M. J., N. Hall, E. Fung et al. (45 co-authors). 2002. Genome sequence of the human malaria parasite Plasmodium falciparum. Nature 419:498-511.
-
(2002)
Nature
, vol.419
, pp. 498-511
-
-
Gardner, M.J.1
Hall, N.2
Fung, E.3
-
20
-
-
0029068851
-
Analyses of ribosomal RNA sequences from glaucocystophyte cyanelles provide new insights into the evolutionary relationships of plastids
-
Helmchen, T. A., D. Bhattacharya, and M. Melkonian. 1995. Analyses of ribosomal RNA sequences from glaucocystophyte cyanelles provide new insights into the evolutionary relationships of plastids. J. Mol. Evol. 41:203-210.
-
(1995)
J. Mol. Evol.
, vol.41
, pp. 203-210
-
-
Helmchen, T.A.1
Bhattacharya, D.2
Melkonian, M.3
-
21
-
-
0029047354
-
A nuclear gene of eubacterial origin in Euglena gracilis reflects cryptic endosymbioses during protist evolution
-
Henze, K., A. Badr, M. Wettern, R. Cerff, and W. Martin. 1995. A nuclear gene of eubacterial origin in Euglena gracilis reflects cryptic endosymbioses during protist evolution. Proc. Natl. Acad. Sci. USA 92:9122-9126.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 9122-9126
-
-
Henze, K.1
Badr, A.2
Wettern, M.3
Cerff, R.4
Martin, W.5
-
22
-
-
0037384263
-
Congruent evidence from alpha-tubulin and beta-tubulin gene phylogenies for a zygomycele origin of microsporidia
-
Keeling, P. J. 2003. Congruent evidence from alpha-tubulin and beta-tubulin gene phylogenies for a zygomycele origin of microsporidia. Fung. Genet. Biol. 38:298-309.
-
(2003)
Fung. Genet. Biol.
, vol.38
, pp. 298-309
-
-
Keeling, P.J.1
-
23
-
-
0040982083
-
A plastid of probable green algal origin in apicomplexan parasites
-
Köhler, S., C. F. Delwiche, P. W. Denny, L. G. Tilney, P. Webster, R. J. M. Wilson, J. D. Palmer, and D. S. Roos. 1997. A plastid of probable green algal origin in apicomplexan parasites. Science 275:1485-1489.
-
(1997)
Science
, vol.275
, pp. 1485-1489
-
-
Köhler, S.1
Delwiche, C.F.2
Denny, P.W.3
Tilney, L.G.4
Webster, P.5
Wilson, R.J.M.6
Palmer, J.D.7
Roos, D.S.8
-
24
-
-
0031018799
-
Evolutionary origin of cryptomonad microalgae: Two novel chloroplast/cytosol-specific GAPDH genes as potential markers of ancestral endosymbiont and host cell components
-
Liaud, M. F., U. Brandt, M. Scherzinger, and R. Cerff. 1997. Evolutionary origin of cryptomonad microalgae: two novel chloroplast/cytosol-specific GAPDH genes as potential markers of ancestral endosymbiont and host cell components. J. Mol. Evol. 44:S28-S37.
-
(1997)
J. Mol. Evol.
, vol.44
-
-
Liaud, M.F.1
Brandt, U.2
Scherzinger, M.3
Cerff, R.4
-
25
-
-
0033983545
-
Compartment-specific isoforms of TPI and GAPDH are imported into diatom mitochondria as a fusion protein: Evidence in favor of a mitochondrial origin of the eukaryotic glycolytic pathway
-
Liaud, M. F., C. Lichtle, K. Apt, W. Martin, and R. Cerff. 2000. Compartment-specific isoforms of TPI and GAPDH are imported into diatom mitochondria as a fusion protein: evidence in favor of a mitochondrial origin of the eukaryotic glycolytic pathway. Mol. Biol. Evol. 17:213-223.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 213-223
-
-
Liaud, M.F.1
Lichtle, C.2
Apt, K.3
Martin, W.4
Cerff, R.5
-
26
-
-
0037126071
-
Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus
-
Martin, W., T. Rujan, E. Richly, A. Hansen, S. Cornelsen, T. Lins, D. Leister, B. Stoebe, M. Hasegawa, and D. Penny. 2002. Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Proc. Natl. Acad. Sci. USA 99:12246-12251.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 12246-12251
-
-
Martin, W.1
Rujan, T.2
Richly, E.3
Hansen, A.4
Cornelsen, S.5
Lins, T.6
Leister, D.7
Stoebe, B.8
Hasegawa, M.9
Penny, D.10
-
27
-
-
15844369205
-
Plastid in human parasites
-
McFadden, G. I., M. Reith, J. Munholland, and N. Lang-Unnasch. 1996. Plastid in human parasites. Nature 381:482.
-
(1996)
Nature
, vol.381
, pp. 482
-
-
McFadden, G.I.1
Reith, M.2
Munholland, J.3
Lang-Unnasch, N.4
-
28
-
-
0031282142
-
Plastids in parasites of humans
-
McFadden, G. I., and R. F. Waller. 1997. Plastids in parasites of humans. Bioessays 19:1033-1040.
-
(1997)
Bioessays
, vol.19
, pp. 1033-1040
-
-
McFadden, G.I.1
Waller, R.F.2
-
29
-
-
0033760849
-
Phylogeny of the Bangiophycidae (Rhodophyta) and the secondary endosymbiotic origin of algal plastids
-
Oliveira, M. C., and D. Bhattacharya. 2000. Phylogeny of the Bangiophycidae (Rhodophyta) and the secondary endosymbiotic origin of algal plastids. Am. J. Bot. 87:482-492.
-
(2000)
Am. J. Bot.
, vol.87
, pp. 482-492
-
-
Oliveira, M.C.1
Bhattacharya, D.2
-
30
-
-
0037327022
-
The symbiotic birth and spread of plastids: How many times and whodunit?
-
Palmer, J. D. 2003. The symbiotic birth and spread of plastids: How many times and whodunit? J. Phycol. 39:1-9.
-
(2003)
J. Phycol.
, vol.39
, pp. 1-9
-
-
Palmer, J.D.1
-
31
-
-
0029836454
-
Quartet puzzling: A quartet maximum-likelihood method for reconstructing tree topologies
-
Strimmer, K., and A. von Haeseler. 1996. Quartet puzzling: a quartet maximum-likelihood method for reconstructing tree topologies. Mol. Biol. Evol. 13:964-969.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 964-969
-
-
Strimmer, K.1
Von Haeseler, A.2
-
32
-
-
0344699451
-
Morphology (tabulation) and molecular evidence for dinoflagellate phylogeny reinforce each other
-
Taylor, F. J. R. 1999. Morphology (tabulation) and molecular evidence for dinoflagellate phylogeny reinforce each other. J. Phycol. 35:1-3.
-
(1999)
J. Phycol.
, vol.35
, pp. 1-3
-
-
Taylor, F.J.R.1
-
33
-
-
0030693903
-
The tigA gene is a transcriptional fusion of glycolytic genes encoding triose-phosphate isomerase and glyceraldehyde-3-phosphate dehydrogenase in oomycota
-
Unkles, S. E., J. M. Logsdon Jr., K. Robison, J. R. Kinghorn, and J. M. Duncan. 1997. The tigA gene is a transcriptional fusion of glycolytic genes encoding triose-phosphate isomerase and glyceraldehyde-3-phosphate dehydrogenase in oomycota. J. Bacteriol. 179:6816-6823.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 6816-6823
-
-
Unkles, S.E.1
Logsdon Jr., J.M.2
Robison, K.3
Kinghorn, J.R.4
Duncan, J.M.5
-
34
-
-
0031436828
-
Evolutionary relationships among eukaryotic crown taxa taking into account site-to-site variation in 18S rRNA
-
Van de Peer, Y., and R. De Wachter. 1997. Evolutionary relationships among eukaryotic crown taxa taking into account site-to-site variation in 18S rRNA. J. Mol. Evol. 45:619-630.
-
(1997)
J. Mol. Evol.
, vol.45
, pp. 619-630
-
-
Van De Peer, Y.1
De Wachter, R.2
-
35
-
-
0242379171
-
Cryptic organelles in parasitic protists and fungi
-
in press
-
Williams, B. A. P., and P. J. Keeling. 2003. Cryptic organelles in parasitic protists and fungi. Adv. Parasitol. (in press).
-
(2003)
Adv. Parasitol.
-
-
Williams, B.A.P.1
Keeling, P.J.2
-
36
-
-
0028220332
-
The evolutionary origin of the 35 kb circular DNA of Plasmodium falciparum: New evidence supports a possible rhodophyte ancestry
-
Williamson, D. H., M. J. Gardner, P. Preiser, D. J. Moore, K. Rangachari, and R. J. Wilson. 1994. The evolutionary origin of the 35 kb circular DNA of Plasmodium falciparum: new evidence supports a possible rhodophyte ancestry. Mol. Gen. Genet. 243:249-252.
-
(1994)
Mol. Gen. Genet.
, vol.243
, pp. 249-252
-
-
Williamson, D.H.1
Gardner, M.J.2
Preiser, P.3
Moore, D.J.4
Rangachari, K.5
Wilson, R.J.6
-
37
-
-
0036307786
-
Progress with parasite plastids
-
Wilson, R. J. 2002. Progress with parasite plastids. J. Mol. Biol. 319:257-274.
-
(2002)
J. Mol. Biol.
, vol.319
, pp. 257-274
-
-
Wilson, R.J.1
-
38
-
-
0030590259
-
Complete gene map of the plastid-like DNA of the malaria parasite Plasmodium falciparum
-
Wilson, R. J., P. W. Denny, D. J. Preiser et al. (11 co-authors). 1996. Complete gene map of the plastid-like DNA of the malaria parasite Plasmodium falciparum. J. Mol. Biol. 261:155-172.
-
(1996)
J. Mol. Biol.
, vol.261
, pp. 155-172
-
-
Wilson, R.J.1
Denny, P.W.2
Preiser, D.J.3
-
39
-
-
0025908149
-
The troublesome parasites: Molecular and morphological evidence that Apicomplexa belong to the dinoflagellate-ciliate clade
-
Wolters, J. 1991. The troublesome parasites: molecular and morphological evidence that Apicomplexa belong to the dinoflagellate-ciliate clade. Biosystems 25:75-84.
-
(1991)
Biosystems
, vol.25
, pp. 75-84
-
-
Wolters, J.1
-
40
-
-
0037180558
-
A single, ancient origin of the plastid in the Chromista
-
Yoon, H. S., J. D. Hackett, G. Pinto, and D. Bhattacharya. 2002. A single, ancient origin of the plastid in the Chromista. Proc. Natl. Acad. Sci. USA 99:15507-15512.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 15507-15512
-
-
Yoon, H.S.1
Hackett, J.D.2
Pinto, G.3
Bhattacharya, D.4
-
41
-
-
0033929166
-
Phylogeny of ultra-rapidly evolving dinoflagellate chloroplast genes: A possible common origin for sporozoan and dinoflagellate plastids
-
Zhang, Z., B. R. Green, and T. Cavalier-Smith. 2000. Phylogeny of ultra-rapidly evolving dinoflagellate chloroplast genes: a possible common origin for sporozoan and dinoflagellate plastids. J. Mol. Evol. 51:26-40.
-
(2000)
J. Mol. Evol.
, vol.51
, pp. 26-40
-
-
Zhang, Z.1
Green, B.R.2
Cavalier-Smith, T.3
|