Substitution rate calibration of small subunit ribosomal RNA identifies chlorarachniophyte endosymbionts as remnants of green algae

Proceedings of the National Academy of Sciences of the United States of America

Volumn 93, Issue 15, 1996, Pages 7732-7736

  Van De Peer, Y ^a   Rensing, S A ^b   Maier, U G ^b,c   De Wachter, R ^a  

^a UNIVERSITY OF ANTWERP   (Belgium)

^b UNIVERSITY OF FREIBURG   (Germany)

^c UNIVERSITY OF BAYREUTH   (Germany)

Author keywords

dissimilarity; evolutionary distances; long branch attraction

Indexed keywords

CHLOROPHYLL A; CHLOROPHYLL B; RIBOSOME RNA;

ARTICLE; CALIBRATION; EVOLUTION; GREEN ALGA; NONHUMAN; PHYLOGENY; PLASTID; PRIORITY JOURNAL; SYMBIOSIS;

ALGAE, GREEN; AMOEBA; ANIMALS; COMPUTER COMMUNICATION NETWORKS; DATABASES, FACTUAL; DICTYOSTELIUM; EVOLUTION, MOLECULAR; MODELS, THEORETICAL; PHYLOGENY; PLASTIDS; RNA, RIBOSOMAL; SYMBIOSIS;

ALGAE; CHLORARACHNION; CHLORARACHNIOPHYCEAE; CHLOROPHYTA; EUKARYOTA;

EID: 0029798360     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.93.15.7732     Document Type: Article

References (42)

1. Douglas, S. E., Murphy, C. A., Spencer, D. F. & Gray, M. W. (1991) Nature (London) 350, 148-151.
2. Maier, U.-G., Hofmann, C. J. B., Eschbach, S., Wolters, J. & Igloi, G. L. (1991) Mol. Gen. Genet. 230, 155-160.
3. McFadden, G. I., Gilson, P. R. & Douglas, S. E. (1994) J. Cell Sci. 107, 649-657.
4. McFadden, G. I., Gilson, P. R., Hofmann, C. J. B., Adcock, G. J. & Maier, U.-W. (1994) Proc. Natl. Acad. Sci. USA 91, 3690-3694.
5. Van de Peer, Y., Van den Broeck, I., De Rijk, P. & De Wachter, R. (1996) Nucleic Acids Res. 24, 86-91.
6. Ludwig, M. & Gibbs, S. P. (1989) J. Phycol 25, 385-394.
7. Hibberd, D. J. (1990) in Handbook of Protoctista, eds. Margulis, L., Coruss, J. O., Melkonian, M. & Chapman, D. J. (Jones & Bartlett, Boston), pp. 288-292.
8. Cavalier-Smith, T., Allsop, M. T. E. P. & Chao, E. E. (1994) Proc. Natl. Acad. Sci. USA 91, 11368-11372.
9. Bhattacharya, D., Helmchen, T., Bibeau, C. & Melkonian, M. (1995) Mol. Biol. Evol. 12, 415-420.
10. McFadden, G. I., Gilson, P. R. & Waller, R. F. (1995) Arch. Protistenk. 145, 231-239.
11. Bhattacharya, D., Helmchen, T. & Melkonian, M. (1995) J. Eukaryotic Microbiol. 42, 65-69.
12. Felsenstein, J. (1978) Syst. Zool. 27, 410-410.
13. Olsen, G. J. (1987) Cold Spring Harbor Symp. Quant. Biol. 53, 825-837.
14. Van de Peer, Y., Neefs, J.-M., De Rijk, P. & De Wachter, R. (1993) J. Mol. Evol. 37, 221-232.
15. Van de Peer, Y., Van der Auwera, G. & De Wachter, R. (1996) J. Mol. Evol. 42, 201-210.
16. Saitou, N. & Nei, M. (1987) Mol. Biol. Evol 4, 406-425.
17. De Rijk, P. & De Wachter, R. (1993) Comput. Appl. Biosci. 9, 735-740.
18. Van de Peer, Y. & De Wachter, R. (1994) Comput. Appl. Biosci. 10, 569-570.
19. Knoll, A. H. (1992) Science 256, 622-627.
20. Kuma, K.-i., Nikoh, N., Iwabe, N. & Miyata, T. (1995) J. Mol. Evol. 41, 238-246.
21. Felsenstein, J. (1985) Evolution 39, 783-791.
22. Jukes, T. H. & Cantor, C. R. (1969) in Mammalian Protein Metabolism, ed. Munro H. H. (Academic, New York), pp. 21-132.
23. Kimura, M. (1980) J. Mol. Evol. 16, 111-120.
24. Cavalier-Smith, T., Allsop, M. T. E. P. & Chao, E. E. (1994) Philos. Trans. R. Soc. London B 346, 387-397.
25. Vivier, E. & Desportes, I. (1989) in Handbook of Protoctista, eds. Margulis, L., Corliss, J. O., Melkonian, M. & Chapman, D. J. (Jones & Bartlett, Boston), pp. 549-573.
26. Goggin, C. L. & Barker, S. C. (1993) Mol. Biochem. Parasitol. 60, 65-70.
27. McFadden, G. I., Gilson, P. R. & Hill, D. R. A. (1994) Eur. J. Phycol. 29, 29-32.
28. Escalante, A. A. & Ayala, F. J. (1995) Proc. Natl. Acad. Sci. USA 92, 5793-5797.
29. Maerz, M., Wolters, J., Hofmann, C. J. B., Sitte, P. & Maier U.-G. (1992) Curr. Genet. 21, 73-81.
30. Ragan, M. A., Bird, C. J., Rice, E. L., Gutell, R. R., Murphy, C. A. & Singh, R. K. (1994) Proc. Natl. Acad. Sci. USA 91, 7276-7280.
31. Woese, C. R., Achenbach, L., Rouviere, P. & Mandelco, L. (1991) Syst. Appl. Microbiol. 14, 364-371.
32. Lockhart, P. J., Beanland, T. J., Howe, C. J. & Larkum, A. W. D. (1992) Proc. Natl. Acad. Sci. USA 89, 2742-2746.
33. Lockhart, P. J., Steel, M. A., Hendy, M. D. & Penny, D. (1994) Mol. Biol. Evol. 11, 605-612.
34. Swofford, D. L. & Olsen, G. J. (1990) in Molecular Systematics, eds. Hillis, D. M. & Moritz, C. (Sinauer, Sunderland, MA), pp. 411-501.
35. Nelissen, B., Van de Peer, Y., Wilmotte, A. & De Wachter, R. (1995) Mol. Biol. Evol. 12, 1166-1173.
36. Morden, C. W., Delwiche, C. F., Kuhsel, M. & Palmer, J. D. (1992) BioSystems 28, 75-90.
37. Douglas, S. E. & Turner, S. (1991) J. Mol. Evol 33, 267-273.
38. Hatakeyama, N., Sasa, T., Watanabe, M. M. & Takaichi, S. (1991) J. Phycol. 27 (Suppl), A154 (abstr.).
39. Wilhelm, C., Müller, A. M., Borstelmann, B. & Schnetter, R. (1991) Cryptogam. Bot. 2, 201-204.
40. Sasa, T., Takaichi, S., Hatakeyama, N. & Watanabe, M. M. (1992) Plant Cell Physiol. 33, 921-925.
41. Gilson, P. & McFadden, G. I. (1995) Chromosoma 103, 635-641.
42. Higashiyama, T., Maki, S, & Yamada, T (1995) Mol. Gen. Genet. 246, 29-36.