-
2
-
-
0032712359
-
Adding the third dimension to virus life cycles: three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs
-
Baker T.S., Olson N.H., and Fuller S.D. Adding the third dimension to virus life cycles: three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs. Microbiol Mol Biol Rev 63 (1999) 862-922
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 862-922
-
-
Baker, T.S.1
Olson, N.H.2
Fuller, S.D.3
-
4
-
-
0024007766
-
Cryo-electron microscopy of vitrified specimens
-
Dubochet J., Adrian M., Chang J.J., Homo J.C., Lepault J., McDowall A.W., and Schultz P. Cryo-electron microscopy of vitrified specimens. Q Rev Biophys 21 (1988) 129-228
-
(1988)
Q Rev Biophys
, vol.21
, pp. 129-228
-
-
Dubochet, J.1
Adrian, M.2
Chang, J.J.3
Homo, J.C.4
Lepault, J.5
McDowall, A.W.6
Schultz, P.7
-
6
-
-
0029003107
-
The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules
-
Henderson R. The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules. Q Rev Biophys 28 (1995) 171-193
-
(1995)
Q Rev Biophys
, vol.28
, pp. 171-193
-
-
Henderson, R.1
-
7
-
-
0036089703
-
Single-particle imaging of macromolecules by cryo-electron microscopy
-
Frank J. Single-particle imaging of macromolecules by cryo-electron microscopy. Annu Rev Biophys Biomol Struct 31 (2002) 303-319
-
(2002)
Annu Rev Biophys Biomol Struct
, vol.31
, pp. 303-319
-
-
Frank, J.1
-
8
-
-
14844330221
-
Structural studies by electron tomography: from cells to molecules
-
This recent review covers the current state and technical aspects of cryo-ET in a comprehensive way. Furthermore, it describes selected applications of the method on various types of macromolecular assemblies.
-
Lučić V., Förster F., and Baumeister W. Structural studies by electron tomography: from cells to molecules. Annu Rev Biochem 74 (2005) 833-865. This recent review covers the current state and technical aspects of cryo-ET in a comprehensive way. Furthermore, it describes selected applications of the method on various types of macromolecular assemblies.
-
(2005)
Annu Rev Biochem
, vol.74
, pp. 833-865
-
-
Lučić, V.1
Förster, F.2
Baumeister, W.3
-
10
-
-
0037451286
-
Structure of a viral DNA gatekeeper at 10 Å resolution by cryo-electron microscopy
-
Orlova E.V., Gowen B., Droge A., Stiege A., Weise F., Lurz R., van Heel M., and Tavares P. Structure of a viral DNA gatekeeper at 10 Å resolution by cryo-electron microscopy. EMBO J 22 (2003) 1255-1262
-
(2003)
EMBO J
, vol.22
, pp. 1255-1262
-
-
Orlova, E.V.1
Gowen, B.2
Droge, A.3
Stiege, A.4
Weise, F.5
Lurz, R.6
van Heel, M.7
Tavares, P.8
-
11
-
-
7644228864
-
Structure and polymorphism of the UL6 portal protein of herpes simplex virus type 1
-
Trus B.L., Cheng N., Newcomb W.W., Homa F.L., Brown J.C., and Steven A.C. Structure and polymorphism of the UL6 portal protein of herpes simplex virus type 1. J Virol 78 (2004) 12668-12671
-
(2004)
J Virol
, vol.78
, pp. 12668-12671
-
-
Trus, B.L.1
Cheng, N.2
Newcomb, W.W.3
Homa, F.L.4
Brown, J.C.5
Steven, A.C.6
-
12
-
-
0345306753
-
Three-dimensional structure of herpes simplex virus from cryo-electron tomography
-
Grünewald K., Desai P., Winkler D.C., Heymann J.B., Belnap D.M., Baumeister W., and Steven A.C. Three-dimensional structure of herpes simplex virus from cryo-electron tomography. Science 302 (2003) 1396-1398
-
(2003)
Science
, vol.302
, pp. 1396-1398
-
-
Grünewald, K.1
Desai, P.2
Winkler, D.C.3
Heymann, J.B.4
Belnap, D.M.5
Baumeister, W.6
Steven, A.C.7
-
13
-
-
0034608018
-
Seeing the herpesvirus capsid at 8.5 Å
-
Zhou Z.H., Dougherty M., Jakana J., He J., Rixon F.J., and Chiu W. Seeing the herpesvirus capsid at 8.5 Å. Science 288 (2000) 877-880
-
(2000)
Science
, vol.288
, pp. 877-880
-
-
Zhou, Z.H.1
Dougherty, M.2
Jakana, J.3
He, J.4
Rixon, F.J.5
Chiu, W.6
-
14
-
-
0029976870
-
Genetically engineered poxviruses for recombinant gene expression, vaccination, and safety
-
Moss B. Genetically engineered poxviruses for recombinant gene expression, vaccination, and safety. Proc Natl Acad Sci USA 93 (1996) 11341-11348
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 11341-11348
-
-
Moss, B.1
-
15
-
-
14544302246
-
Cryo-electron tomography of vaccinia virus
-
This detailed analysis of one of the most complex viral assemblies, IMV, helped to resolve some of the most puzzling questions in vaccinia research.
-
Cyrklaff M., Risco C., Fernandez J.J., Jimenez M.V., Esteban M., Baumeister W., and Carrascosa J.L. Cryo-electron tomography of vaccinia virus. Proc Natl Acad Sci USA 102 (2005) 2772-2777. This detailed analysis of one of the most complex viral assemblies, IMV, helped to resolve some of the most puzzling questions in vaccinia research.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 2772-2777
-
-
Cyrklaff, M.1
Risco, C.2
Fernandez, J.J.3
Jimenez, M.V.4
Esteban, M.5
Baumeister, W.6
Carrascosa, J.L.7
-
16
-
-
0035667931
-
Microtubule-dependent organization of vaccinia virus core-derived early mRNAs into distinct cytoplasmic structures
-
Mallardo M., Schleich S., and Krijnse Locker J. Microtubule-dependent organization of vaccinia virus core-derived early mRNAs into distinct cytoplasmic structures. Mol Biol Cell 12 (2001) 3875-3891
-
(2001)
Mol Biol Cell
, vol.12
, pp. 3875-3891
-
-
Mallardo, M.1
Schleich, S.2
Krijnse Locker, J.3
-
17
-
-
0037388765
-
Structural organization of authentic, mature HIV-1 virions and cores
-
Briggs J.A., Wilk T., Welker R., Kräusslich H.G., and Fuller S.D. Structural organization of authentic, mature HIV-1 virions and cores. EMBO J 22 (2003) 1707-1715
-
(2003)
EMBO J
, vol.22
, pp. 1707-1715
-
-
Briggs, J.A.1
Wilk, T.2
Welker, R.3
Kräusslich, H.G.4
Fuller, S.D.5
-
18
-
-
12544255655
-
Three-dimensional structure of HIV-1 virus-like particles by electron cryotomography
-
HIV-1 virus-like particles were studied with focus on the overall shape, in particular core architecture and core location within the surrounding membrane.
-
Benjamin J., Ganser-Pornillos B.K., Tivol W.F., Sundquist W.I., and Jensen G.J. Three-dimensional structure of HIV-1 virus-like particles by electron cryotomography. J Mol Biol 346 (2005) 577-588. HIV-1 virus-like particles were studied with focus on the overall shape, in particular core architecture and core location within the surrounding membrane.
-
(2005)
J Mol Biol
, vol.346
, pp. 577-588
-
-
Benjamin, J.1
Ganser-Pornillos, B.K.2
Tivol, W.F.3
Sundquist, W.I.4
Jensen, G.J.5
-
19
-
-
33644806492
-
The Mechanism of HIV-1 core assembly: insights from three-dimensional reconstructions of authentic virions
-
This study on intact HIV-1 virions analysed core architecture inside mature virions and revealed an organisation that implies a novel mechanism of core assembly.
-
Briggs J.A., Grünewald K., Glass B., Förster F., Kräusslich H.G., and Fuller S.D. The Mechanism of HIV-1 core assembly: insights from three-dimensional reconstructions of authentic virions. Structure 14 (2006) 15-20. This study on intact HIV-1 virions analysed core architecture inside mature virions and revealed an organisation that implies a novel mechanism of core assembly.
-
(2006)
Structure
, vol.14
, pp. 15-20
-
-
Briggs, J.A.1
Grünewald, K.2
Glass, B.3
Förster, F.4
Kräusslich, H.G.5
Fuller, S.D.6
-
20
-
-
0032930797
-
Assembly and analysis of conical models for the HIV-1 core
-
Ganser B.K., Li S., Klishko V.Y., Finch J.T., and Sundquist W.I. Assembly and analysis of conical models for the HIV-1 core. Science 283 (1999) 80-83
-
(1999)
Science
, vol.283
, pp. 80-83
-
-
Ganser, B.K.1
Li, S.2
Klishko, V.Y.3
Finch, J.T.4
Sundquist, W.I.5
-
21
-
-
16344390563
-
Retrovirus envelope protein complex structure in situ studied by cryo-electron tomography
-
Using an elegant single particle derived iterative alignment and averaging procedure for extracted subtomograms that also accounts for the missing wedge problem in tomographic applications, the authors revealed the native structure of the MMLV envelope protein on the virus surface.
-
Förster F., Medalia O., Zauberman N., Baumeister W., and Fass D. Retrovirus envelope protein complex structure in situ studied by cryo-electron tomography. Proc Natl Acad Sci USA 102 (2005) 4729-4734. Using an elegant single particle derived iterative alignment and averaging procedure for extracted subtomograms that also accounts for the missing wedge problem in tomographic applications, the authors revealed the native structure of the MMLV envelope protein on the virus surface.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 4729-4734
-
-
Förster, F.1
Medalia, O.2
Zauberman, N.3
Baumeister, W.4
Fass, D.5
-
22
-
-
0034075555
-
Characterization of vaccinia virus intracellular cores: implications for viral uncoating and core structure
-
Pedersen K., Snijder E.J., Schleich S., Roos N., Griffiths G., and Locker J.K. Characterization of vaccinia virus intracellular cores: implications for viral uncoating and core structure. J Virol 74 (2000) 3525-3536
-
(2000)
J Virol
, vol.74
, pp. 3525-3536
-
-
Pedersen, K.1
Snijder, E.J.2
Schleich, S.3
Roos, N.4
Griffiths, G.5
Locker, J.K.6
-
23
-
-
20444488145
-
Viruses as probes for systems analysis of cellular signalling, cytoskeleton reorganization and endocytosis
-
Pelkmans L. Viruses as probes for systems analysis of cellular signalling, cytoskeleton reorganization and endocytosis. Curr Opin Microbiol 8 (2005) 331-337
-
(2005)
Curr Opin Microbiol
, vol.8
, pp. 331-337
-
-
Pelkmans, L.1
-
24
-
-
11144247761
-
A voyage to the inner space of cells
-
Baumeister W. A voyage to the inner space of cells. Protein Sci 14 (2005) 257-269
-
(2005)
Protein Sci
, vol.14
, pp. 257-269
-
-
Baumeister, W.1
-
25
-
-
0037044862
-
Macromolecular architecture in eukaryotic cells visualized by cryoelectron tomography
-
Medalia O., Weber I., Frangakis A.S., Nicastro D., Gerisch G., and Baumeister W. Macromolecular architecture in eukaryotic cells visualized by cryoelectron tomography. Science 298 (2002) 1209-1213
-
(2002)
Science
, vol.298
, pp. 1209-1213
-
-
Medalia, O.1
Weber, I.2
Frangakis, A.S.3
Nicastro, D.4
Gerisch, G.5
Baumeister, W.6
-
26
-
-
0033991590
-
Cytoarchitecture and physical properties of cytoplasm: volume, viscosity, diffusion, intracellular surface area
-
Luby-Phelps K. Cytoarchitecture and physical properties of cytoplasm: volume, viscosity, diffusion, intracellular surface area. Int Rev Cytol 192 (2000) 189-221
-
(2000)
Int Rev Cytol
, vol.192
, pp. 189-221
-
-
Luby-Phelps, K.1
-
27
-
-
0037134035
-
Multicolor and electron microscopic imaging of connexin trafficking
-
Gaietta G., Deerinck T.J., Adams S.R., Bouwer J., Tour O., Laird D.W., Sosinsky G.E., Tsien R.Y., and Ellisman M.H. Multicolor and electron microscopic imaging of connexin trafficking. Science 296 (2002) 503-507
-
(2002)
Science
, vol.296
, pp. 503-507
-
-
Gaietta, G.1
Deerinck, T.J.2
Adams, S.R.3
Bouwer, J.4
Tour, O.5
Laird, D.W.6
Sosinsky, G.E.7
Tsien, R.Y.8
Ellisman, M.H.9
-
28
-
-
28544439052
-
Correlative microscopy and electron tomography of GFP through photooxidation
-
Grabenbauer M., Geerts W.J., Fernadez-Rodriguez J., Hoenger A., Koster A.J., and Nilsson T. Correlative microscopy and electron tomography of GFP through photooxidation. Nat Methods 2 (2005) 857-862
-
(2005)
Nat Methods
, vol.2
, pp. 857-862
-
-
Grabenbauer, M.1
Geerts, W.J.2
Fernadez-Rodriguez, J.3
Hoenger, A.4
Koster, A.J.5
Nilsson, T.6
-
29
-
-
0029977667
-
Labeling of peroxisomes with green fluorescent protein in living P. pastoris cells
-
Monosov E.Z., Wenzel T.J., Luers G.H., Heyman J.A., and Subramani S. Labeling of peroxisomes with green fluorescent protein in living P. pastoris cells. J Histochem Cytochem 44 (1996) 581-589
-
(1996)
J Histochem Cytochem
, vol.44
, pp. 581-589
-
-
Monosov, E.Z.1
Wenzel, T.J.2
Luers, G.H.3
Heyman, J.A.4
Subramani, S.5
-
30
-
-
27144475807
-
Correlated light and electron microscopic imaging of multiple endogenous proteins using quantum dots
-
Giepmans B.N., Deerinck T.J., Smarr B.L., Jones Y.Z., and Ellisman M.H. Correlated light and electron microscopic imaging of multiple endogenous proteins using quantum dots. Nat Methods 2 (2005) 743-749
-
(2005)
Nat Methods
, vol.2
, pp. 743-749
-
-
Giepmans, B.N.1
Deerinck, T.J.2
Smarr, B.L.3
Jones, Y.Z.4
Ellisman, M.H.5
-
31
-
-
0034687769
-
Toward detecting and identifying macromolecules in a cellular context: template matching applied to electron tomograms
-
Böhm J., Frangakis A.S., Hegerl R., Nickell S., Typke D., and Baumeister W. Toward detecting and identifying macromolecules in a cellular context: template matching applied to electron tomograms. Proc Natl Acad Sci USA 97 (2000) 14245-14250
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 14245-14250
-
-
Böhm, J.1
Frangakis, A.S.2
Hegerl, R.3
Nickell, S.4
Typke, D.5
Baumeister, W.6
-
32
-
-
2942544494
-
Computational exploration of structural information from cryo-electron tomograms
-
Frangakis A.S., and Förster F. Computational exploration of structural information from cryo-electron tomograms. Curr Opin Struct Biol 14 (2004) 325-331
-
(2004)
Curr Opin Struct Biol
, vol.14
, pp. 325-331
-
-
Frangakis, A.S.1
Förster, F.2
-
33
-
-
32944473016
-
Virus entry: open sesame
-
Marsh M., and Helenius A. Virus entry: open sesame. Cell 124 (2006) 729-740
-
(2006)
Cell
, vol.124
, pp. 729-740
-
-
Marsh, M.1
Helenius, A.2
-
34
-
-
1842534392
-
How viruses enter animal cells
-
Smith A.E., and Helenius A. How viruses enter animal cells. Science 304 (2004) 237-242
-
(2004)
Science
, vol.304
, pp. 237-242
-
-
Smith, A.E.1
Helenius, A.2
-
35
-
-
32944475622
-
A superhighway to virus infection
-
Greber U.F., and Way M. A superhighway to virus infection. Cell 124 (2006) 741-754
-
(2006)
Cell
, vol.124
, pp. 741-754
-
-
Greber, U.F.1
Way, M.2
-
36
-
-
20844438496
-
Cryo-electron microscopy of vitreous sections
-
Al-Amoudi A., Chang J.J., Leforestier A., McDowall A., Salamin L.M., Norlen L.P., Richter K., Blanc N.S., Studer D., and Dubochet J. Cryo-electron microscopy of vitreous sections. EMBO J 23 (2004) 3583-3588
-
(2004)
EMBO J
, vol.23
, pp. 3583-3588
-
-
Al-Amoudi, A.1
Chang, J.J.2
Leforestier, A.3
McDowall, A.4
Salamin, L.M.5
Norlen, L.P.6
Richter, K.7
Blanc, N.S.8
Studer, D.9
Dubochet, J.10
-
37
-
-
0030957356
-
Viral manipulations of the actin cytoskeleton
-
Cudmore S., Reckmann I., and Way M. Viral manipulations of the actin cytoskeleton. Trends Microbiol 5 (1997) 142-148
-
(1997)
Trends Microbiol
, vol.5
, pp. 142-148
-
-
Cudmore, S.1
Reckmann, I.2
Way, M.3
-
38
-
-
33745203490
-
Distribution and three-dimensional structure of AIDS virus envelope spikes
-
••]. Docking of available crystal structures domains resulted in a model that might explain immune evasion by the virus.
-
••]. Docking of available crystal structures domains resulted in a model that might explain immune evasion by the virus.
-
(2006)
Nature
, vol.441
, pp. 847-852
-
-
Zhu, P.1
Liu, J.2
Bess Jr., J.3
Chertova, E.4
Lifson, J.D.5
Grise, H.6
Ofek, G.A.7
Taylor, K.A.8
Roux, K.H.9
-
39
-
-
33748038359
-
-
•], particularly in the stem region, possibly because of the different image processing methodologies used in the two studies. Atomic resolution structures were fitted into the EM-density and implications of two possible models are discussed.
-
-
-
|