메뉴 건너뛰기




Volumn 7, Issue 7, 2006, Pages 761-768

Toward the systems biology of vesicle transport

Author keywords

Genomics; High throughput screening; Intracellular trafficking; Proteomics; Systems biology; Vesicle transport

Indexed keywords

GUANOSINE TRIPHOSPHATASE; MESSENGER RNA; RAB PROTEIN; SNARE PROTEIN; TRANSCRIPTOME; TRANSFERRIN;

EID: 33745023062     PISSN: 13989219     EISSN: 16000854     Source Type: Journal    
DOI: 10.1111/j.1600-0854.2006.00436.x     Document Type: Review
Times cited : (6)

References (58)
  • 6
    • 0032490917 scopus 로고    scopus 로고
    • Perinuclear localization of chromatin facilitates transcriptional silencing
    • Andrulis ED, Neiman AM, Zappulla DC, Sternglanz R. Perinuclear localization of chromatin facilitates transcriptional silencing. Nature 1998; 394: 592-595.
    • (1998) Nature , vol.394 , pp. 592-595
    • Andrulis, E.D.1    Neiman, A.M.2    Zappulla, D.C.3    Sternglanz, R.4
  • 9
    • 0035319601 scopus 로고    scopus 로고
    • Emerging technologies in yeast genomics
    • Kumar A, Snyder M. Emerging technologies in yeast genomics. Nat Rev Genet 2001; 2: 302-312.
    • (2001) Nat Rev Genet , vol.2 , pp. 302-312
    • Kumar, A.1    Snyder, M.2
  • 13
    • 4444309237 scopus 로고    scopus 로고
    • Systematic analysis of SNARE molecules in Arabidopsis: Dissection of the post-Golgi network in plant cells
    • Uemura T, Ueda T, Ohniwa RL, Nakano A, Takeyasu K, Sato MH. Systematic analysis of SNARE molecules in Arabidopsis: Dissection of the post-Golgi network in plant cells. Cell Struct Funct 2004; 29: 49-65.
    • (2004) Cell Struct Funct , vol.29 , pp. 49-65
    • Uemura, T.1    Ueda, T.2    Ohniwa, R.L.3    Nakano, A.4    Takeyasu, K.5    Sato, M.H.6
  • 14
    • 0037435030 scopus 로고    scopus 로고
    • Mass spectrometry-based proteomics
    • Aebersold R, Mann M. Mass spectrometry-based proteomics. Nature 2003; 422: 198-207.
    • (2003) Nature , vol.422 , pp. 198-207
    • Aebersold, R.1    Mann, M.2
  • 16
    • 23144452492 scopus 로고    scopus 로고
    • Weighing in on ubiquitin: The expanding role of mass-spectrometry-based proteomics
    • Kirkpatrick DS, Denison C, Gygi SP. Weighing in on ubiquitin: The expanding role of mass-spectrometry-based proteomics. Nat Cell Biol 2005; 7: 750-757.
    • (2005) Nat Cell Biol , vol.7 , pp. 750-757
    • Kirkpatrick, D.S.1    Denison, C.2    Gygi, S.P.3
  • 18
    • 3042687234 scopus 로고    scopus 로고
    • Identification of protein associations in organelles, using mass spectrometry-based proteomics
    • Warnock DE, Fahy E, Taylor SW. Identification of protein associations in organelles, using mass spectrometry-based proteomics. Mass Spectrom Rev 2004; 23: 259-280.
    • (2004) Mass Spectrom Rev , vol.23 , pp. 259-280
    • Warnock, D.E.1    Fahy, E.2    Taylor, S.W.3
  • 20
    • 0036907867 scopus 로고    scopus 로고
    • Fluorescence two-dimensional difference gel electrophoresis and mass spectrometry based proteomic analysis of Escherichia coli
    • Yan JX, Devenish AT, Wait R, Stone T, Lewis S, Fowler S. Fluorescence two-dimensional difference gel electrophoresis and mass spectrometry based proteomic analysis of Escherichia coli. Proteomics 2002; 2: 1682-1698.
    • (2002) Proteomics , vol.2 , pp. 1682-1698
    • Yan, J.X.1    Devenish, A.T.2    Wait, R.3    Stone, T.4    Lewis, S.5    Fowler, S.6
  • 22
    • 23444442876 scopus 로고    scopus 로고
    • Non-stoichiometric relationship between clathrin heavy and light chains revealed by quantitative comparative proteomics of clathrin-coated vesicles from brain and liver
    • Girard M, Allaire PD, Mcpherson PS, Blondeau F. Non-stoichiometric relationship between clathrin heavy and light chains revealed by quantitative comparative proteomics of clathrin-coated vesicles from brain and liver. Mol Cell Proteomics 2005; 4: 1145-1154.
    • (2005) Mol Cell Proteomics , vol.4 , pp. 1145-1154
    • Girard, M.1    Allaire, P.D.2    Mcpherson, P.S.3    Blondeau, F.4
  • 24
    • 3242731195 scopus 로고    scopus 로고
    • A model for random sampling and estimation of relative protein abundance in shotgun proteomics
    • Liu H, Sadygov RG, Yates JR. A model for random sampling and estimation of relative protein abundance in shotgun proteomics. Anal Chem 2004; 76: 4193-4201.
    • (2004) Anal Chem , vol.76 , pp. 4193-4201
    • Liu, H.1    Sadygov, R.G.2    Yates, J.R.3
  • 28
    • 22844450110 scopus 로고    scopus 로고
    • Systematic interpretation of genetic interactions using protein networks
    • Kelley R, Ideker T. Systematic interpretation of genetic interactions using protein networks. Nat Biotechnol 2005; 23: 561-566.
    • (2005) Nat Biotechnol , vol.23 , pp. 561-566
    • Kelley, R.1    Ideker, T.2
  • 29
    • 27544433981 scopus 로고    scopus 로고
    • An E-MAP of the ER
    • Conibear E. An E-MAP of the ER. Cell 2005; 123: 366-368.
    • (2005) Cell , vol.123 , pp. 366-368
    • Conibear, E.1
  • 30
    • 0031408332 scopus 로고    scopus 로고
    • The yeast adaptor protein complex, AP-3, is essential for the efficient delivery of alkaline phosphatase by the alternate pathway to the vacuole
    • Stepp JD, Huang K, Lemmon SK. The yeast adaptor protein complex, AP-3, is essential for the efficient delivery of alkaline phosphatase by the alternate pathway to the vacuole. J Cell Biol 1997; 139: 1761-1774.
    • (1997) J Cell Biol , vol.139 , pp. 1761-1774
    • Stepp, J.D.1    Huang, K.2    Lemmon, S.K.3
  • 35
    • 4944238229 scopus 로고    scopus 로고
    • Hot spots for modulating toxicity identified by genomic phenotyping and localization mapping
    • Begley TJ, Rosenbach AS, Ideker T, Samson LD. Hot spots for modulating toxicity identified by genomic phenotyping and localization mapping. Mol Cell 2004; 16: 117-125.
    • (2004) Mol Cell , vol.16 , pp. 117-125
    • Begley, T.J.1    Rosenbach, A.S.2    Ideker, T.3    Samson, L.D.4
  • 36
    • 2342487990 scopus 로고    scopus 로고
    • Cells have distinct mechanisms to maintain protection against different reactive oxygen species: Oxidative-stress-response genes
    • Thorpe GW, Fong CS, Alic N, Higgins VJ, Dawes IW. Cells have distinct mechanisms to maintain protection against different reactive oxygen species: Oxidative-stress-response genes. Proc Natl Acad Sci USA 2004; 101: 6564-6569.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 6564-6569
    • Thorpe, G.W.1    Fong, C.S.2    Alic, N.3    Higgins, V.J.4    Dawes, I.W.5
  • 38
    • 11244270628 scopus 로고    scopus 로고
    • The yeast VPS genes affect telomere length regulation
    • Rog O, Smolikov S, Krauskopf A, Kupiec M. The yeast VPS genes affect telomere length regulation. Curr Genet 2005; 47: 18-28.
    • (2005) Curr Genet , vol.47 , pp. 18-28
    • Rog, O.1    Smolikov, S.2    Krauskopf, A.3    Kupiec, M.4
  • 41
    • 0036320668 scopus 로고    scopus 로고
    • Genomic screen for vacuolar protein sorting genes in Saccharomyces cerevisiae
    • Bonangelino CJ, Chavez EM, Bonifacino JS. Genomic screen for vacuolar protein sorting genes in Saccharomyces cerevisiae. Mol Biol Cell 2002; 13: 2486-2501.
    • (2002) Mol Biol Cell , vol.13 , pp. 2486-2501
    • Bonangelino, C.J.1    Chavez, E.M.2    Bonifacino, J.S.3
  • 43
    • 3042718729 scopus 로고    scopus 로고
    • Dissection mammalian midbody proteome reveals conserved cytokinesis mechanisms
    • Skop AR, Liu H, Yates J, Meyer BJ, Heald R. Dissection mammalian midbody proteome reveals conserved cytokinesis mechanisms. Science 2004; 305: 61-66.
    • (2004) Science , vol.305 , pp. 61-66
    • Skop, A.R.1    Liu, H.2    Yates, J.3    Meyer, B.J.4    Heald, R.5
  • 44
    • 13244295521 scopus 로고    scopus 로고
    • Membrane traffic: A driving force in cytokinesis
    • Albertson R, Riggs B, Sullivan W. Membrane traffic: A driving force in cytokinesis. Trends Cell Biol 2005; 15: 92-101.
    • (2005) Trends Cell Biol , vol.15 , pp. 92-101
    • Albertson, R.1    Riggs, B.2    Sullivan, W.3
  • 47
    • 21844440569 scopus 로고    scopus 로고
    • Genome-wide analysis of human kinases in clathrin- and caveolae/ raft-mediated endocytosis
    • Pelkmans L, Fava E, Grabner H, Hannus M, Habermann B, Krausz E, Zerial M. Genome-wide analysis of human kinases in clathrin- and caveolae/ raft-mediated endocytosis. Nature 2005; 436: 78-86.
    • (2005) Nature , vol.436 , pp. 78-86
    • Pelkmans, L.1    Fava, E.2    Grabner, H.3    Hannus, M.4    Habermann, B.5    Krausz, E.6    Zerial, M.7
  • 48
    • 21844454457 scopus 로고    scopus 로고
    • Kinase-regulated quantal assemblies and kiss-and-run recycling of caveolae
    • Pelkmans L, Zerial M. Kinase-regulated quantal assemblies and kiss-and-run recycling of caveolae. Nature 2005; 436: 128-133.
    • (2005) Nature , vol.436 , pp. 128-133
    • Pelkmans, L.1    Zerial, M.2
  • 49
    • 0037432528 scopus 로고    scopus 로고
    • How reliable are experimental protein-protein interaction data?
    • Sprinzak E, Sattath S, Margalit H. How reliable are experimental protein-protein interaction data? J Mol Biol 2003; 327: 919-923.
    • (2003) J Mol Biol , vol.327 , pp. 919-923
    • Sprinzak, E.1    Sattath, S.2    Margalit, H.3
  • 52
    • 22144459754 scopus 로고    scopus 로고
    • Discovering functional relationships: Biochemistry versus genetics
    • Wong SL, Zhang LV, Roth FP. Discovering functional relationships: biochemistry versus genetics. Trends Genet 2005; 21: 424-427.
    • (2005) Trends Genet , vol.21 , pp. 424-427
    • Wong, S.L.1    Zhang, L.V.2    Roth, F.P.3
  • 53
    • 33644527950 scopus 로고    scopus 로고
    • The model organism as a system: Integrating 'omics' data sets
    • Joyce AR, Palsson BO. The model organism as a system: Integrating 'omics' data sets. Nat Rev Mol Cell Biol 2006; 7: 198-210.
    • (2006) Nat Rev Mol Cell Biol , vol.7 , pp. 198-210
    • Joyce, A.R.1    Palsson, B.O.2
  • 57
    • 0033525930 scopus 로고    scopus 로고
    • The receptor recycling pathway contains two distinct populations of early endosomes with different sorting functions
    • Sheff DR, Daro EA, Hull M, Mellman I. The receptor recycling pathway contains two distinct populations of early endosomes with different sorting functions. J Cell Biol 1999; 145: 123-139.
    • (1999) J Cell Biol , vol.145 , pp. 123-139
    • Sheff, D.R.1    Daro, E.A.2    Hull, M.3    Mellman, I.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.