-
1
-
-
0034306996
-
The Rb/E2F pathway: Expanding roles and emerging paradigms
-
Harbour, J. W., and Dean, D. C. (2000) The Rb/E2F pathway: expanding roles and emerging paradigms, Genes Dev. 14, 2393-2409.
-
(2000)
Genes Dev.
, vol.14
, pp. 2393-2409
-
-
Harbour, J.W.1
Dean, D.C.2
-
2
-
-
0035063183
-
The Rb/E2F pathway and cancer
-
Nevins, J. R. (2001) The Rb/E2F pathway and cancer, Hum. Mol. Genet. 10, 699-703.
-
(2001)
Hum. Mol. Genet.
, vol.10
, pp. 699-703
-
-
Nevins, J.R.1
-
3
-
-
0035936113
-
The E2F1-3 transcription factors are essential for cellular proliferation
-
Wu, L., Timmers, C., Maiti, B., Saavedra, H. I., Sang, L., Chong, G. T., Nuckolls, F., Giangrande, P., Wright, F. A., Field, S. J., Greenberg, M. E., Orkin, S., Nevins, J. R., Robinson, M. L., and Leone, G. (2001) The E2F1-3 transcription factors are essential for cellular proliferation, Nature 414, 457-462.
-
(2001)
Nature
, vol.414
, pp. 457-462
-
-
Wu, L.1
Timmers, C.2
Maiti, B.3
Saavedra, H.I.4
Sang, L.5
Chong, G.T.6
Nuckolls, F.7
Giangrande, P.8
Wright, F.A.9
Field, S.J.10
Greenberg, M.E.11
Orkin, S.12
Nevins, J.R.13
Robinson, M.L.14
Leone, G.15
-
4
-
-
2942722811
-
Molecular mechanisms of E2F-dependent activation and pRB-mediated repression
-
Frolov, M. V., and Dyson, N. J. (2004) Molecular mechanisms of E2F-dependent activation and pRB-mediated repression, J. Cell. Sci. 117, 2173-2181.
-
(2004)
J. Cell. Sci.
, vol.117
, pp. 2173-2181
-
-
Frolov, M.V.1
Dyson, N.J.2
-
5
-
-
3242761487
-
Emergent human pathogen simian virus 40 and its role in cancer
-
Vilchez, R. A., and Butel, J. S. (2004) Emergent human pathogen simian virus 40 and its role in cancer, Clin. Microbiol. Rev. 17, 495-508.
-
(2004)
Clin. Microbiol. Rev.
, vol.17
, pp. 495-508
-
-
Vilchez, R.A.1
Butel, J.S.2
-
6
-
-
0031746554
-
Polyomavirus T antigens: Molecular chaperones for multiprotein complexes
-
Brodsky, J. L., and Pipas, J. M. (1998) Polyomavirus T antigens: molecular chaperones for multiprotein complexes, J. Virol. 72, 5329-5334.
-
(1998)
J. Virol.
, vol.72
, pp. 5329-5334
-
-
Brodsky, J.L.1
Pipas, J.M.2
-
7
-
-
0030842474
-
The amino-terminal transforming region of simian virus 40 large T and small t antigens functions as a J domain
-
Srinivasan, A., McClellan, A. J., Vartikar, J., Marks, I., Cantalupo, P., Li, Y., Whyte, P., Rundell, K., Brodsky, J. L., and Pipas, J. M. (1997) The amino-terminal transforming region of simian virus 40 large T and small t antigens functions as a J domain, Mol. Cell. Biol. 17, 4761-4773.
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 4761-4773
-
-
Srinivasan, A.1
McClellan, A.J.2
Vartikar, J.3
Marks, I.4
Cantalupo, P.5
Li, Y.6
Whyte, P.7
Rundell, K.8
Brodsky, J.L.9
Pipas, J.M.10
-
8
-
-
0035863048
-
Structural basis for the inactivation of retinoblastoma tumor suppressor by SV40 large T antigen
-
Kim, H. Y., Ahn, B. Y., and Cho, Y. (2001) Structural basis for the inactivation of retinoblastoma tumor suppressor by SV40 large T antigen, EMBO J. 20, 295-304.
-
(2001)
EMBO J.
, vol.20
, pp. 295-304
-
-
Kim, H.Y.1
Ahn, B.Y.2
Cho, Y.3
-
9
-
-
0030812552
-
The DnaJ domain of polyomavirus large T antigen is required to regulate Rb family tumor suppressor function
-
Sheng, Q., Denis, D., Ratnofsky, M., Roberts, T. M., DeCaprio, J. A., and Schaffhausen, B. (1997) The DnaJ domain of polyomavirus large T antigen is required to regulate Rb family tumor suppressor function, J. Virol. 71, 9410-9416.
-
(1997)
J. Virol.
, vol.71
, pp. 9410-9416
-
-
Sheng, Q.1
Denis, D.2
Ratnofsky, M.3
Roberts, T.M.4
DeCaprio, J.A.5
Schaffhausen, B.6
-
10
-
-
0033842443
-
The molecular chaperone activity of simian virus 40 large T antigen is required to disrupt Rb-E2F family complexes by an ATP-dependent mechanism
-
Sullivan, C. S., Cantalupo, P., and Pipas, J. M. (2000) The molecular chaperone activity of simian virus 40 large T antigen is required to disrupt Rb-E2F family complexes by an ATP-dependent mechanism, Mol. Cell. Biol. 20, 6233-6243.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 6233-6243
-
-
Sullivan, C.S.1
Cantalupo, P.2
Pipas, J.M.3
-
11
-
-
14444277241
-
DnaJ/hsp40 chaperone domain of SV40 large T antigen promotes efficient viral DNA replication
-
Campbell, K. S., Mullane, K. P., Aksoy, I. A., Stubdal, H., Zalvide, J., Pipas, J. M., Silver, P. A., Roberts, T. M., Schaffhausen, B. S., and DeCaprio, J. A. (1997) DnaJ/hsp40 chaperone domain of SV40 large T antigen promotes efficient viral DNA replication, Genes Dev. 11, 1098-1110.
-
(1997)
Genes Dev.
, vol.11
, pp. 1098-1110
-
-
Campbell, K.S.1
Mullane, K.P.2
Aksoy, I.A.3
Stubdal, H.4
Zalvide, J.5
Pipas, J.M.6
Silver, P.A.7
Roberts, T.M.8
Schaffhausen, B.S.9
DeCaprio, J.A.10
-
12
-
-
0032568541
-
Role of the J-domain in the cooperation of Hsp40 with Hsp70
-
Greene, M. K., Maskos, K., and Landry, S. J. (1998) Role of the J-domain in the cooperation of Hsp40 with Hsp70, Proc. Natl. Acad. Sci. U.S.A. 95, 6108-6113.
-
(1998)
Proc. Natl. Acad. Sci. U.S.A.
, vol.95
, pp. 6108-6113
-
-
Greene, M.K.1
Maskos, K.2
Landry, S.J.3
-
13
-
-
4344590764
-
The J-protein family: Modulating protein assembly, disassembly and translocation
-
Walsh, P., Bursac, D., Law, Y. C., Cyr, D., and Lithgow, T. (2004) The J-protein family: modulating protein assembly, disassembly and translocation, EMBO Rep. 5, 567-571.
-
(2004)
EMBO Rep.
, vol.5
, pp. 567-571
-
-
Walsh, P.1
Bursac, D.2
Law, Y.C.3
Cyr, D.4
Lithgow, T.5
-
14
-
-
1542638696
-
Structure of the functional fragment of auxilin required for catalytic uncoating of clathrin-coated vesicles
-
Gruschus, J. M., Han, C. J., Greener, T., Ferretti, J. A., Greene, L. E., and Eisenberg, E. (2004) Structure of the functional fragment of auxilin required for catalytic uncoating of clathrin-coated vesicles, Biochemistry 43, 3111-3119.
-
(2004)
Biochemistry
, vol.43
, pp. 3111-3119
-
-
Gruschus, J.M.1
Han, C.J.2
Greener, T.3
Ferretti, J.A.4
Greene, L.E.5
Eisenberg, E.6
-
15
-
-
0031945665
-
Structure, function and evolution of DnaJ: Conservation and adaptation of chaperone function
-
Cheetham, M. E., and Caplan, A. J. (1998) Structure, function and evolution of DnaJ: conservation and adaptation of chaperone function, Cell Stress Chaperones 3, 28-36.
-
(1998)
Cell Stress Chaperones
, vol.3
, pp. 28-36
-
-
Cheetham, M.E.1
Caplan, A.J.2
-
16
-
-
0028170215
-
2-terminal 108 amino acids of the Escherichia coli DnaJ protein stimulate the ATPase activity of DnaK and are sufficient for lambda replication
-
2-terminal 108 amino acids of the Escherichia coli DnaJ protein stimulate the ATPase activity of DnaK and are sufficient for lambda replication, J. Biol. Chem. 269, 5446-5451.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 5446-5451
-
-
Wall, D.1
Zylicz, M.2
Georgopoulos, C.3
-
17
-
-
0029871766
-
A conserved HPD sequence of the J-domain is necessary for YDJ1 stimulation of Hsp70 ATPase activity at a site distinct from substrate binding
-
Tsai, J., and Douglas, M. G. (1996) A conserved HPD sequence of the J-domain is necessary for YDJ1 stimulation of Hsp70 ATPase activity at a site distinct from substrate binding, J. Biol. Chem. 271, 9347-9354.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 9347-9354
-
-
Tsai, J.1
Douglas, M.G.2
-
18
-
-
0034680778
-
NMR structure of the N-terminal J domain of polyomavirus T antigens: Implications for DnaJ-like domains and for T antigen mutations
-
Berjanskii, M. V., Riley, M. I., Xie, A., Semenchenko, V., Folk, W. R., and Van Doren, S. R. (2000) NMR structure of the N-terminal J domain of polyomavirus T antigens: implications for DnaJ-like domains and for T antigen mutations, J. Biol. Chem. 275, 36094-36103.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 36094-36103
-
-
Berjanskii, M.V.1
Riley, M.I.2
Xie, A.3
Semenchenko, V.4
Folk, W.R.5
Van Doren, S.R.6
-
19
-
-
0036859957
-
Scanning mutagenesis identifies amino acid residues essential for the in vivo activity of the Escherichia coli DnaJ (Hsp40) J-domain
-
Genevaux, P., Schwager, F., Georgopoulos, C., and Kelley, W. L. (2002) Scanning mutagenesis identifies amino acid residues essential for the in vivo activity of the Escherichia coli DnaJ (Hsp40) J-domain, Genetics 162, 1045-1053.
-
(2002)
Genetics
, vol.162
, pp. 1045-1053
-
-
Genevaux, P.1
Schwager, F.2
Georgopoulos, C.3
Kelley, W.L.4
-
20
-
-
0037995501
-
Structure and energetics of an allele-specific genetic interaction between dnaJ and dnaK: Correlation of nuclear magnetic resonance chemical shift perturbations in the J-domain of Hsp40/DnaJ with binding affinity for the ATPase domain of Hsp70/DnaK
-
Landry, S. J. (2003) Structure and energetics of an allele-specific genetic interaction between dnaJ and dnaK: correlation of nuclear magnetic resonance chemical shift perturbations in the J-domain of Hsp40/DnaJ with binding affinity for the ATPase domain of Hsp70/DnaK, Biochemistry 42, 4926-4936.
-
(2003)
Biochemistry
, vol.42
, pp. 4926-4936
-
-
Landry, S.J.1
-
21
-
-
0037133323
-
Mutagenesis of a functional chimeric gene in yeast identifies mutations in the simian virus 40 large T antigen J domain
-
Fewell, S. W., Pipas, J. M., and Brodsky, J. L. (2002) Mutagenesis of a functional chimeric gene in yeast identifies mutations in the simian virus 40 large T antigen J domain, Proc. Natl. Acad. Sci. U.S.A. 99, 2002-2007.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 2002-2007
-
-
Fewell, S.W.1
Pipas, J.M.2
Brodsky, J.L.3
-
22
-
-
22544439033
-
Genetic analysis of the polyomavirus DnaJ domain
-
Whalen, K. A., de Jesus, R., Kean, J. A., and Schaffhausen, B. S. (2005) Genetic analysis of the polyomavirus DnaJ domain, J. Virol. 79, 9982-9990.
-
(2005)
J. Virol.
, vol.79
, pp. 9982-9990
-
-
Whalen, K.A.1
De Jesus, R.2
Kean, J.A.3
Schaffhausen, B.S.4
-
23
-
-
0029879122
-
HLA-DR4 and HLA-DR10 motifs that carry susceptibility to rheumatoid arthritis bind 70-kD heat shock proteins
-
Auger, I., Escola, J. M., Gorvel, J. P., and Roudier, J. (1996) HLA-DR4 and HLA-DR10 motifs that carry susceptibility to rheumatoid arthritis bind 70-kD heat shock proteins, Nat. Med. 2, 306-310.
-
(1996)
Nat. Med.
, vol.2
, pp. 306-310
-
-
Auger, I.1
Escola, J.M.2
Gorvel, J.P.3
Roudier, J.4
-
24
-
-
0036222543
-
Interaction between heat-shock protein 73 and HLA-DRB1 alleles associated or not with rheumatoid arthritis
-
Auger, I., Lepecuchel, L., and Roudier, J. (2002) Interaction between heat-shock protein 73 and HLA-DRB1 alleles associated or not with rheumatoid arthritis, Arthritis Rheum. 46, 929-933.
-
(2002)
Arthritis Rheum.
, vol.46
, pp. 929-933
-
-
Auger, I.1
Lepecuchel, L.2
Roudier, J.3
-
25
-
-
0030910370
-
A function for the QKRAA amino acid motif: Mediating binding of DnaJ to DnaK. Implications for the association of rheumatoid arthritis with HLA-DR4
-
Auger, I., and Roudier, J. (1997) A function for the QKRAA amino acid motif: mediating binding of DnaJ to DnaK. Implications for the association of rheumatoid arthritis with HLA-DR4, J. Clin. Invest. 99, 1818-1822.
-
(1997)
J. Clin. Invest.
, vol.99
, pp. 1818-1822
-
-
Auger, I.1
Roudier, J.2
-
26
-
-
0041734594
-
Structural features required for the interaction of the Hsp70 molecular chaperone DnaK with its cochaperone DnaJ
-
Suh, W. C., Lu, C. Z., and Gross, C. A. (1999) Structural features required for the interaction of the Hsp70 molecular chaperone DnaK with its cochaperone DnaJ, J. Biol. Chem. 274, 30534-30539.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 30534-30539
-
-
Suh, W.C.1
Lu, C.Z.2
Gross, C.A.3
-
27
-
-
4644243721
-
Rational mutagenesis of a 40 kDa heat shock protein from Agrobacterium tumefaciens identifies amino acid residues critical to its in vivo function, Int
-
Hennessy, F., Boshoff, A., and Blatch, G. L. (2005) Rational mutagenesis of a 40 kDa heat shock protein from Agrobacterium tumefaciens identifies amino acid residues critical to its in vivo function, Int. J. Biochem. Cell Biol. 37, 177-191.
-
(2005)
J. Biochem. Cell Biol.
, vol.37
, pp. 177-191
-
-
Hennessy, F.1
Boshoff, A.2
Blatch, G.L.3
-
28
-
-
22344447035
-
Not all J domains are created equal: Implications for the specificity of Hsp40-Hsp70 interactions
-
Hennessy, F., Nicoll, W. S., Zimmermann, R., Cheetham, M. E., and Blatch, G. L. (2005) Not all J domains are created equal: implications for the specificity of Hsp40-Hsp70 interactions, Protein Sci. 14, 1697-1709.
-
(2005)
Protein Sci.
, vol.14
, pp. 1697-1709
-
-
Hennessy, F.1
Nicoll, W.S.2
Zimmermann, R.3
Cheetham, M.E.4
Blatch, G.L.5
-
29
-
-
0034051065
-
A novel NMR method for determining the interfaces of large protein-protein complexes
-
Takahashi, H., Nakanishi, T., Kami, K., Arata, Y., and Shimada, I. (2000) A novel NMR method for determining the interfaces of large protein-protein complexes, Nat. Struct. Biol. 7, 220-223.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 220-223
-
-
Takahashi, H.1
Nakanishi, T.2
Kami, K.3
Arata, Y.4
Shimada, I.5
-
30
-
-
0037433504
-
1H residual dipolar couplings using conjoined rigid body/torsion angle dynamics
-
1H residual dipolar couplings using conjoined rigid body/torsion angle dynamics, J. Am. Chem. Soc. 125, 2902-2912.
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 2902-2912
-
-
Clore, G.M.1
Schwieters, C.D.2
-
31
-
-
25144456011
-
Solution nuclear magnetic resonance spectroscopy techniques for probing intermolecular interactions
-
Pellecchia, M. (2005) Solution nuclear magnetic resonance spectroscopy techniques for probing intermolecular interactions, Chem. Biol. 72, 961-971.
-
(2005)
Chem. Biol.
, vol.72
, pp. 961-971
-
-
Pellecchia, M.1
-
32
-
-
0032493331
-
TIMP-1 contact sites and perturbations of stromelysin 1 mapped by NMR and a paramagnetic surface probe
-
Arumugam, S., Hemme, C. L., Yoshida, N., Suzuki, K., Nagase, H., Berjanskii, M., Wu, B., and Van Doren, S. R. (1998) TIMP-1 contact sites and perturbations of stromelysin 1 mapped by NMR and a paramagnetic surface probe, Biochemistry 37, 9650-9657.
-
(1998)
Biochemistry
, vol.37
, pp. 9650-9657
-
-
Arumugam, S.1
Hemme, C.L.2
Yoshida, N.3
Suzuki, K.4
Nagase, H.5
Berjanskii, M.6
Wu, B.7
Van Doren, S.R.8
-
33
-
-
0242290223
-
Hyaluronan recognition mode of CD44 revealed by cross-saturation and chemical shift perturbation experiments
-
Takeda, M., Terasawa, H., Sakakura, M., Yamaguchi, Y., Kajiwara, M., Kawashima, H., Miyasaka, M., and Shimada, I. (2003) Hyaluronan recognition mode of CD44 revealed by cross-saturation and chemical shift perturbation experiments, J. Biol. Chem. 278, 43550-43555.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 43550-43555
-
-
Takeda, M.1
Terasawa, H.2
Sakakura, M.3
Yamaguchi, Y.4
Kajiwara, M.5
Kawashima, H.6
Miyasaka, M.7
Shimada, I.8
-
34
-
-
0033610476
-
Identification by NMR spectroscopy of residues at contact surfaces in large, slowly exchanging macromolecular complexes
-
Matsuo, H., Walters, K. J., Teruya, K., Tanaka, T., Gassner, G. T., Lippard, S. J., Kyogoku, Y., and Wagner, G. (1999) Identification by NMR spectroscopy of residues at contact surfaces in large, slowly exchanging macromolecular complexes, J. Am. Chem. Soc. 121, 9903-9904.
-
(1999)
J. Am. Chem. Soc.
, vol.121
, pp. 9903-9904
-
-
Matsuo, H.1
Walters, K.J.2
Teruya, K.3
Tanaka, T.4
Gassner, G.T.5
Lippard, S.J.6
Kyogoku, Y.7
Wagner, G.8
-
35
-
-
0038723727
-
Global orientation of bound MMP-3 and N-TIMP-1 via residual dipolar couplings
-
Arumugam, S., and Van Doren, S. R. (2003) Global orientation of bound MMP-3 and N-TIMP-1 via residual dipolar couplings, Biochemistry 42, 7950-7958.
-
(2003)
Biochemistry
, vol.42
, pp. 7950-7958
-
-
Arumugam, S.1
Van Doren, S.R.2
-
36
-
-
0037160426
-
Identification of protein surfaces by NMR measurements with a pramagnetic Gd(III) chelate
-
Pintacuda, G., and Otting, G. (2002) Identification of protein surfaces by NMR measurements with a pramagnetic Gd(III) chelate, J. Am. Chem. Soc. 124, 372-373.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 372-373
-
-
Pintacuda, G.1
Otting, G.2
-
37
-
-
1542289014
-
NMR solution structure of the focal adhesion targeting domain of focal adhesion kinase in complex with a paxillin LD peptide: Evidence for a two-site binding model
-
Gao, G., Prutzman, K. C., King, M. L., Scheswohl, D. M., DeRose, E. F., London, R. E., Schaller, M. D., and Campbell, S. L. (2004) NMR solution structure of the focal adhesion targeting domain of focal adhesion kinase in complex with a paxillin LD peptide: evidence for a two-site binding model, J. Biol. Chem. 279, 8441-8451.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 8441-8451
-
-
Gao, G.1
Prutzman, K.C.2
King, M.L.3
Scheswohl, D.M.4
DeRose, E.F.5
London, R.E.6
Schaller, M.D.7
Campbell, S.L.8
-
38
-
-
0029913807
-
An evolutionary trace method defines binding surfaces common to protein families
-
Lichtarge, O., Bourne, H. R., and Cohen, F. E. (1996) An evolutionary trace method defines binding surfaces common to protein families, J. Mol. Biol. 257, 342-358.
-
(1996)
J. Mol. Biol.
, vol.257
, pp. 342-358
-
-
Lichtarge, O.1
Bourne, H.R.2
Cohen, F.E.3
-
39
-
-
0029664921
-
Evolutionarily conserved Galphabetagamma binding surfaces support a model of the G protein-receptor complex
-
Lichtarge, O., Bourne, H. R., and Cohen, F. E. (1996) Evolutionarily conserved Galphabetagamma binding surfaces support a model of the G protein-receptor complex, Proc. Natl. Acad. Sci. U.S.A. 93, 7507-7511.
-
(1996)
Proc. Natl. Acad. Sci. U.S.A.
, vol.93
, pp. 7507-7511
-
-
Lichtarge, O.1
Bourne, H.R.2
Cohen, F.E.3
-
40
-
-
0035126520
-
Prediction and confirmation of a site critical for effector regulation of RGS domain activity
-
Sowa, M. E., He, W., Slep, K. C., Kercher, M. A., Lichtarge, O., and Wensel, T. G. (2001) Prediction and confirmation of a site critical for effector regulation of RGS domain activity, Nat. Struct. Biol. 8, 234-237.
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 234-237
-
-
Sowa, M.E.1
He, W.2
Slep, K.C.3
Kercher, M.A.4
Lichtarge, O.5
Wensel, T.G.6
-
41
-
-
0036300444
-
Structural clusters of evolutionary trace residues are statistically significant and common in proteins
-
Madabushi, S., Yao, H., Marsh, M., Kristensen, D. M., Philippi, A., Sowa, M. E., and Lichtarge, O. (2002) Structural clusters of evolutionary trace residues are statistically significant and common in proteins, J. Mol. Biol. 316, 139-154.
-
(2002)
J. Mol. Biol.
, vol.316
, pp. 139-154
-
-
Madabushi, S.1
Yao, H.2
Marsh, M.3
Kristensen, D.M.4
Philippi, A.5
Sowa, M.E.6
Lichtarge, O.7
-
42
-
-
0036468670
-
Evolutionary predictions of binding surfaces and interactions
-
Lichtarge, O., and Sowa, M. E. (2002) Evolutionary predictions of binding surfaces and interactions, Curr. Opin. Struct. Biol. 12, 21-27.
-
(2002)
Curr. Opin. Struct. Biol.
, vol.12
, pp. 21-27
-
-
Lichtarge, O.1
Sowa, M.E.2
-
43
-
-
0028360726
-
Differential regulation of Hsp70 subfamilies by the eukaryotic DnaJ homologue YDJ1
-
Cyr, D. M., and Douglas, M. G. (1994) Differential regulation of Hsp70 subfamilies by the eukaryotic DnaJ homologue YDJ1, J. Biol. Chem. 269, 9798-9804.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 9798-9804
-
-
Cyr, D.M.1
Douglas, M.G.2
-
44
-
-
0033929731
-
Species-specific elements in the large T-antigen J domain are required for cellular transformation and DNA replication by simian virus 40
-
Sullivan, C. S., Tremblay, J. D., Fewell, S. W., Lewis, J. A., Brodsky, J. L., and Pipas, J. M. (2000) Species-specific elements in the large T-antigen J domain are required for cellular transformation and DNA replication by simian virus 40, Mol. Cell. Biol. 20, 5749-5757.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 5749-5757
-
-
Sullivan, C.S.1
Tremblay, J.D.2
Fewell, S.W.3
Lewis, J.A.4
Brodsky, J.L.5
Pipas, J.M.6
-
45
-
-
0027484169
-
Threonine 204 of the chaperone protein Hsc70 influences the structure of the active site, but is not essential for ATP hydrolysis
-
O'Brien, M. C., and McKay, D. B. (1993) Threonine 204 of the chaperone protein Hsc70 influences the structure of the active site, but is not essential for ATP hydrolysis, J. Biol. Chem. 268, 24323-24329.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 24323-24329
-
-
O'Brien, M.C.1
McKay, D.B.2
-
46
-
-
3142677815
-
The 70-kDa heat shock protein chaperone nucleotide-binding domain in solution unveiled as a molecular machine that can reorient its functional subdomains
-
Zhang, Y., and Zuiderweg, E. R. (2004) The 70-kDa heat shock protein chaperone nucleotide-binding domain in solution unveiled as a molecular machine that can reorient its functional subdomains, Proc. Natl. Acad. Sci. U.S.A. 101, 10272-10277.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 10272-10277
-
-
Zhang, Y.1
Zuiderweg, E.R.2
-
47
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) NMRPipe: a multidimensional spectral processing system based on UNIX pipes, J. Biomol. NMR 6, 277-293.
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
48
-
-
0004757060
-
-
University of California, San Francisco
-
Goddard, T. D., and Kneller, D. G. (2000) SPARKY, University of California, San Francisco.
-
(2000)
SPARKY
-
-
Goddard, T.D.1
Kneller, D.G.2
-
49
-
-
0030612833
-
Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution
-
Pervushin, K., Riek, R., Wider, G., and Wüthrich, K. (1997) Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution, Proc. Natl. Acad. Sci. U.S.A. 94, 12366-12371.
-
(1997)
Proc. Natl. Acad. Sci. U.S.A.
, vol.94
, pp. 12366-12371
-
-
Pervushin, K.1
Riek, R.2
Wider, G.3
Wüthrich, K.4
-
50
-
-
0018600707
-
An improved assay for nanomole amounts of inorganic phosphate
-
Lanzetta, P. A., Alvarez, L. J., Reinach, P. S., and Candia, O. A. (1979) An improved assay for nanomole amounts of inorganic phosphate, Anal. Biochem. 100, 95-97.
-
(1979)
Anal. Biochem.
, vol.100
, pp. 95-97
-
-
Lanzetta, P.A.1
Alvarez, L.J.2
Reinach, P.S.3
Candia, O.A.4
-
51
-
-
0025019705
-
The ATPase activity of SecA is regulated by acidic phospholipids, SecY, and the leader and mature domains of precursor proteins
-
Lill, R., Dowhan, W., and Wickner, W. (1990) The ATPase activity of SecA is regulated by acidic phospholipids, SecY, and the leader and mature domains of precursor proteins, Cell 60, 271-280.
-
(1990)
Cell
, vol.60
, pp. 271-280
-
-
Lill, R.1
Dowhan, W.2
Wickner, W.3
-
52
-
-
0037418175
-
Crystal structure of the retinoblastoma tumor suppressor protein bound to E2F and the molecular basis of its regulation
-
Xiao, B., Spencer, J., Clements, A., Ali-Khan, N., Mittnacht, S., Broceno, C., Burghammer, M., Perrakis, A., Marmorstein, R., and Gamblin, S. J. (2003) Crystal structure of the retinoblastoma tumor suppressor protein bound to E2F and the molecular basis of its regulation, Proc. Natl. Acad. Sci. U.S.A. 100, 2363-2368.
-
(2003)
Proc. Natl. Acad. Sci. U.S.A.
, vol.100
, pp. 2363-2368
-
-
Xiao, B.1
Spencer, J.2
Clements, A.3
Ali-Khan, N.4
Mittnacht, S.5
Broceno, C.6
Burghammer, M.7
Perrakis, A.8
Marmorstein, R.9
Gamblin, S.J.10
-
53
-
-
0141706377
-
NMR structure of the forkhead-associated domain from the Arabidopsis receptor kinase-associated protein phosphatase
-
Lee, G. I., Ding, Z., Walker, J. C., and Van Doren, S. R. (2003) NMR structure of the forkhead-associated domain from the Arabidopsis receptor kinase-associated protein phosphatase, Proc. Natl. Acad. Sci. U.S.A. 100, 11261-11266.
-
(2003)
Proc. Natl. Acad. Sci. U.S.A.
, vol.100
, pp. 11261-11266
-
-
Lee, G.I.1
Ding, Z.2
Walker, J.C.3
Van Doren, S.R.4
-
54
-
-
0032711731
-
Analysis of heregulin symmetry by weighted evolutionary tracing
-
Landgraf, R., Fischer, D., and Eisenberg, D. (1999) Analysis of heregulin symmetry by weighted evolutionary tracing, Protein Eng. 12, 943-951.
-
(1999)
Protein Eng.
, vol.12
, pp. 943-951
-
-
Landgraf, R.1
Fischer, D.2
Eisenberg, D.3
-
55
-
-
0036382875
-
Hsc70-interacting HPD loop of the J domain of polyomavirus T antigens fluctuates in psec to nsec and μsec to msec
-
Berjanskii, M. V., Riley, M. I., and Van Doren, S. R. (2002) Hsc70-interacting HPD loop of the J domain of polyomavirus T antigens fluctuates in psec to nsec and μsec to msec, J. Mol. Biol. 321, 503-516.
-
(2002)
J. Mol. Biol.
, vol.321
, pp. 503-516
-
-
Berjanskii, M.V.1
Riley, M.I.2
Van Doren, S.R.3
-
56
-
-
28944437358
-
Structure of the Rb C-terminal domain bound to E2F1-DP1: A mechanism for phosphorylation-induced E2F release
-
Rubin, S. M., Gall, A. L., Zheng, N., and Pavletich, N. P. (2005) Structure of the Rb C-terminal domain bound to E2F1-DP1: a mechanism for phosphorylation-induced E2F release, Cell 123, 1093-1106.
-
(2005)
Cell
, vol.123
, pp. 1093-1106
-
-
Rubin, S.M.1
Gall, A.L.2
Zheng, N.3
Pavletich, N.P.4
-
57
-
-
0001913048
-
Predicting Protein Disorder for N-, C-, and Internal Regions
-
Li, X., Romero, P., Rani, M., Dunker, A. K., and Obradovic, Z. (1999) Predicting Protein Disorder for N-, C-, and Internal Regions, Genome Inf. Ser. 10, 30-40.
-
(1999)
Genome Inf. Ser.
, vol.10
, pp. 30-40
-
-
Li, X.1
Romero, P.2
Rani, M.3
Dunker, A.K.4
Obradovic, Z.5
-
58
-
-
0035188314
-
Sequence complexity of disordered protein
-
Romero, P., Obradovic, Z., Li, X., Garner, E. C., Brown, C. J., and Dunker, A. K. (2001) Sequence complexity of disordered protein, Proteins 42, 38-48.
-
(2001)
Proteins
, vol.42
, pp. 38-48
-
-
Romero, P.1
Obradovic, Z.2
Li, X.3
Garner, E.C.4
Brown, C.J.5
Dunker, A.K.6
-
59
-
-
22744437069
-
Natively disordered proteins: Functions and predictions
-
Romero, P., Obradovic, Z., and Dunker, A. K. (2004) Natively disordered proteins: functions and predictions, Appl. Bioinf. 3, 105-113.
-
(2004)
Appl. Bioinf.
, vol.3
, pp. 105-113
-
-
Romero, P.1
Obradovic, Z.2
Dunker, A.K.3
-
60
-
-
0033521588
-
In vivo newly translated polypeptides are sequestered in a protected folding environment
-
Thulasiraman, V., Yang, C. F., and Frydman, J. (1999) In vivo newly translated polypeptides are sequestered in a protected folding environment, EMBO J. 18, 85-95.
-
(1999)
EMBO J.
, vol.18
, pp. 85-95
-
-
Thulasiraman, V.1
Yang, C.F.2
Frydman, J.3
-
61
-
-
0026799491
-
Unfolded proteins stimulate molecular chaperone Hsc70 ATPase by accelerating ADP/ATP exchange
-
Sadis, S., and Hightower, L. E. (1992) Unfolded proteins stimulate molecular chaperone Hsc70 ATPase by accelerating ADP/ATP exchange, Biochemistry 31, 9406-9412.
-
(1992)
Biochemistry
, vol.31
, pp. 9406-9412
-
-
Sadis, S.1
Hightower, L.E.2
-
62
-
-
23944475554
-
Switches, catapults, and chaperones: Steady-state kinetic analysis of Hsp70-substrate interactions
-
Chesnokova, L. S., and Witt, S. N. (2005) Switches, catapults, and chaperones: steady-state kinetic analysis of Hsp70-substrate interactions, Biochemistry 44, 11224-11233.
-
(2005)
Biochemistry
, vol.44
, pp. 11224-11233
-
-
Chesnokova, L.S.1
Witt, S.N.2
-
63
-
-
0030790668
-
Tiny T antigen: An autonomous polyomavirus T antigen amino-terminal domain
-
Riley, M. I., Yoo, W., Mda, N. Y., and Folk, W. R. (1997) Tiny T antigen: an autonomous polyomavirus T antigen amino-terminal domain, J. Virol. 71, 6068-6074.
-
(1997)
J. Virol.
, vol.71
, pp. 6068-6074
-
-
Riley, M.I.1
Yoo, W.2
Mda, N.Y.3
Folk, W.R.4
-
64
-
-
0030581148
-
Nuclear magnetic resonance solution structure of the human Hsp40 (HDJ-1) J-domain
-
Qian, Y. Q., Patel, D., Hartl, F.-U., and McGoll, D. J. (1996) Nuclear magnetic resonance solution structure of the human Hsp40 (HDJ-1) J-domain, J. Mol. Biol. 260, 224-235.
-
(1996)
J. Mol. Biol.
, vol.260
, pp. 224-235
-
-
Qian, Y.Q.1
Patel, D.2
Hartl, F.-U.3
McGoll, D.J.4
-
65
-
-
0030581175
-
NMR structure of the J-domain and the Gly/Phe-rich region of the Escherichia coli DnaJ chaperone
-
Pellecchia, M., Szyperski, T., Wall, D., Georgopoulos, C., and Wüthrich, K. (1996) NMR structure of the J-domain and the Gly/Phe-rich region of the Escherichia coli DnaJ chaperone, J. Mol. Biol. 260, 236-250.
-
(1996)
J. Mol. Biol.
, vol.260
, pp. 236-250
-
-
Pellecchia, M.1
Szyperski, T.2
Wall, D.3
Georgopoulos, C.4
Wüthrich, K.5
-
66
-
-
0025371625
-
The amino terminus of polyomavirus middle T antigen is required for transformation
-
Cook, D. N., and Hassell, J. A. (1990) The amino terminus of polyomavirus middle T antigen is required for transformation, J. Virol. 64, 1879-1887.
-
(1990)
J. Virol.
, vol.64
, pp. 1879-1887
-
-
Cook, D.N.1
Hassell, J.A.2
-
67
-
-
0029025435
-
Amino-terminal regions of polyomavirus middle T antigen are required for interactions with protein phosphatase 2A
-
Glenn, G. M., and Eckhart, W. (1995) Amino-terminal regions of polyomavirus middle T antigen are required for interactions with protein phosphatase 2A, J. Virol. 69, 3729-3736.
-
(1995)
J. Virol.
, vol.69
, pp. 3729-3736
-
-
Glenn, G.M.1
Eckhart, W.2
-
68
-
-
0029836495
-
A novel simian virus 40 early-region domain mediates transactivation of the cyclin a promoter by small-t antigen and is required for transformation in small-t antigen-dependent assay
-
Porras, A., Bennett, J., Howe, A., Tokos, K., Bouck, N., Henglein, B., Sathyamangalam, S., Thimmapaya, B., and Rundell, K. (1996) A novel simian virus 40 early-region domain mediates transactivation of the cyclin A promoter by small-t antigen and is required for transformation in small-t antigen-dependent assay, J. Virol. 70, 6902-6908.
-
(1996)
J. Virol.
, vol.70
, pp. 6902-6908
-
-
Porras, A.1
Bennett, J.2
Howe, A.3
Tokos, K.4
Bouck, N.5
Henglein, B.6
Sathyamangalam, S.7
Thimmapaya, B.8
Rundell, K.9
-
69
-
-
3342960406
-
Experimentally biased model structure of the Hsc70/auxilin complex: Substrate transfer and interdomain structural change
-
Gruschus, J. M., Greene, L. E., Eisenberg, E., and Ferretti, J. A. (2004) Experimentally biased model structure of the Hsc70/auxilin complex: substrate transfer and interdomain structural change, Protein Sci. 13, 2029-2044.
-
(2004)
Protein Sci.
, vol.13
, pp. 2029-2044
-
-
Gruschus, J.M.1
Greene, L.E.2
Eisenberg, E.3
Ferretti, J.A.4
-
70
-
-
0036382875
-
Hsc70-interacting HPD loop of the J domain of polyomavirus T antigens fluctuates in psec to nsec and μsec to msec
-
Berjanskii, M. V., Riley, M. I., and Van Doren, S. R. (2002) Hsc70-interacting HPD loop of the J domain of polyomavirus T antigens fluctuates in psec to nsec and μsec to msec, J. Mol. Biol. 321, 503-516.
-
(2002)
J. Mol. Biol.
, vol.321
, pp. 503-516
-
-
Berjanskii, M.V.1
Riley, M.I.2
Van Doren, S.R.3
-
71
-
-
0034023572
-
J domain-independent regulation of the Rb family by polyomavirus large T antigen
-
Sheng, Q., Love, T. M., and Schaffhausen, B. (2000) J domain-independent regulation of the Rb family by polyomavirus large T antigen, J. Virol. 74, 5280-5290.
-
(2000)
J. Virol.
, vol.74
, pp. 5280-5290
-
-
Sheng, Q.1
Love, T.M.2
Schaffhausen, B.3
-
72
-
-
15244342418
-
Activation of CREB/ATF sites by polyomavirus large T antigen
-
Love, T. M., de Jesus, R., Kean, J. A., Sheng, Q., Leger, A., and Schaffhausen, B. (2005) Activation of CREB/ATF sites by polyomavirus large T antigen, J. Virol. 79, 4180-4190.
-
(2005)
J. Virol.
, vol.79
, pp. 4180-4190
-
-
Love, T.M.1
De Jesus, R.2
Kean, J.A.3
Sheng, Q.4
Leger, A.5
Schaffhausen, B.6
-
73
-
-
0029682742
-
TAF-like function of SV40 large T antigen
-
Damania, B., and Alwine, J. C. (1996) TAF-like function of SV40 large T antigen, Genes Dev. 10, 1369-1381.
-
(1996)
Genes Dev.
, vol.10
, pp. 1369-1381
-
-
Damania, B.1
Alwine, J.C.2
-
74
-
-
0031951664
-
Simian virus 40 large T antigen interacts with human TFIIB-related factor and small nuclear RNA-activating protein complex for transcriptional activation of TATA-containing polymerase III promoters
-
Damania, B., Mital, R., and Alwine, J. C. (1998) Simian virus 40 large T antigen interacts with human TFIIB-related factor and small nuclear RNA-activating protein complex for transcriptional activation of TATA-containing polymerase III promoters, Mol. Cell. Biol. 18, 1331-1338.
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 1331-1338
-
-
Damania, B.1
Mital, R.2
Alwine, J.C.3
-
75
-
-
0024978377
-
Heat shock protein-mediated disassembly of nucleoprotein structures is required for the initiation of bacteriophage lambda DNA replication
-
Alfano, C., and McMacken, R. (1989) Heat shock protein-mediated disassembly of nucleoprotein structures is required for the initiation of bacteriophage lambda DNA replication, J. Biol. Chem. 264, 10709-10718.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 10709-10718
-
-
Alfano, C.1
McMacken, R.2
-
76
-
-
0024316732
-
Initiation of lambda DNA replication with purified host- and bacteriophage-encoded proteins: The role of the dnaK, dnaJ and grpE heat shock proteins
-
Zylicz, M., Ang, D., Liberek, K., and Georgopoulos, C. (1989) Initiation of lambda DNA replication with purified host- and bacteriophage-encoded proteins: the role of the dnaK, dnaJ and grpE heat shock proteins, EMBO J. 8, 1601-1608.
-
(1989)
EMBO J.
, vol.8
, pp. 1601-1608
-
-
Zylicz, M.1
Ang, D.2
Liberek, K.3
Georgopoulos, C.4
-
77
-
-
0025875276
-
Function of DnaJ and DnaK as chaperones in origin-specific DNA binding by RepA
-
Wickner, S., Hoskins, J., and McKenney, K. (1991) Function of DnaJ and DnaK as chaperones in origin-specific DNA binding by RepA, Nature 350, 165-167.
-
(1991)
Nature
, vol.350
, pp. 165-167
-
-
Wickner, S.1
Hoskins, J.2
McKenney, K.3
-
78
-
-
0026454375
-
DnaJ, DnaK, and GrpE heat shock proteins are required in oriP1 DNA replication solely at the RepA monomerization step
-
Wickner, S., Skowyra, D., Hoskins, J., and McKenney, K. (1992) DnaJ, DnaK, and GrpE heat shock proteins are required in oriP1 DNA replication solely at the RepA monomerization step, Proc. Natl. Acad. Sci. U.S.A. 89, 10345-10349.
-
(1992)
Proc. Natl. Acad. Sci. U.S.A.
, vol.89
, pp. 10345-10349
-
-
Wickner, S.1
Skowyra, D.2
Hoskins, J.3
McKenney, K.4
-
79
-
-
0037115601
-
Structural basis for the recognition of the E2F transactivation domain by the retinoblastoma tumor suppressor
-
Lee, C., Chang, J. H., Lee, H. S., and Cho, Y. (2002) Structural basis for the recognition of the E2F transactivation domain by the retinoblastoma tumor suppressor, Genes Dev. 16, 3199-3212.
-
(2002)
Genes Dev.
, vol.16
, pp. 3199-3212
-
-
Lee, C.1
Chang, J.H.2
Lee, H.S.3
Cho, Y.4
|