메뉴 건너뛰기




Volumn 34, Issue 8, 2006, Pages 2219-2229

A sequence motif conserved in diverse nuclear proteins identifies a protein interaction domain utilised for nuclear targeting by human TFIIS

Author keywords

[No Author keywords available]

Indexed keywords

CARRIER PROTEIN; NUCLEAR PROTEIN; PHOSPHOPROTEIN PHOSPHATASE 1; TRANSCRIPTION ELONGATION FACTOR; IWS1 PROTEIN, HUMAN; NUCLEOCYTOPLASMIC TRANSPORT PROTEIN; PROTEIN; TRANSCRIPTION FACTOR S II; TRANSCRIPTION FACTOR S-II;

EID: 33744528890     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkl239     Document Type: Article
Times cited : (27)

References (47)
  • 1
    • 0034213044 scopus 로고    scopus 로고
    • Connecting transcription to messenger RNA processing
    • Proudfoot,N. (2000) Connecting transcription to messenger RNA processing. Trends Biochem. Sci., 25, 290-293.
    • (2000) Trends Biochem. Sci. , vol.25 , pp. 290-293
    • Proudfoot, N.1
  • 2
    • 0037107547 scopus 로고    scopus 로고
    • On the importance of being co-transcriptional
    • Neugebauer,K.M. (2002) On the importance of being co-transcriptional. J. Cell Sci., 115, 3865-3871.
    • (2002) J. Cell Sci. , vol.115 , pp. 3865-3871
    • Neugebauer, K.M.1
  • 3
    • 0037041395 scopus 로고    scopus 로고
    • An extensive network of coupling among gene expression machines
    • Maniatis,T. and Reed,R. (2002) An extensive network of coupling among gene expression machines. Nature, 416, 499-506.
    • (2002) Nature , vol.416 , pp. 499-506
    • Maniatis, T.1    Reed, R.2
  • 4
    • 0034717122 scopus 로고    scopus 로고
    • Like attracts like: Getting RNA processing together in the nucleus
    • Lewis,J.D. and Tollervey,D. (2000) Like attracts like: Getting RNA processing together in the nucleus. Science, 288, 1385-1389.
    • (2000) Science , vol.288 , pp. 1385-1389
    • Lewis, J.D.1    Tollervey, D.2
  • 5
    • 0041669439 scopus 로고    scopus 로고
    • Nuclear speckles: A model for nuclear organelles
    • Lamond,A.I. and Spector,D.L. (2003) Nuclear speckles: A model for nuclear organelles. Nature Rev. Mol. Cell Biol., 4, 605-612.
    • (2003) Nature Rev. Mol. Cell Biol. , vol.4 , pp. 605-612
    • Lamond, A.I.1    Spector, D.L.2
  • 6
    • 0032740248 scopus 로고    scopus 로고
    • Assembly of the nuclear transcription and processing machinery: Cajal bodies (coiled bodies) and transcriptosomes
    • Gall,J.G., Bellini,M., Wu,Z. and Murphy,C. (1999) Assembly of the nuclear transcription and processing machinery: Cajal bodies (coiled bodies) and transcriptosomes. Mol. Biol. Cell, 10, 4385-4402.
    • (1999) Mol. Biol. Cell , vol.10 , pp. 4385-4402
    • Gall, J.G.1    Bellini, M.2    Wu, Z.3    Murphy, C.4
  • 7
    • 0034524515 scopus 로고    scopus 로고
    • Cajal bodies: The first 100 years
    • Gall,J.G. (2000) Cajal bodies: The first 100 years. Ann. Rev. Cell Dev. Biol., 16, 273-300.
    • (2000) Ann. Rev. Cell Dev. Biol. , vol.16 , pp. 273-300
    • Gall, J.G.1
  • 8
    • 0033153348 scopus 로고    scopus 로고
    • hnRNP complexes: Composition, structure, and function
    • Krecic,A.M. and Swanson,M.S. (1999) hnRNP complexes: Composition, structure, and function. Curr. Opin. Cell Biol., 11, 363-371.
    • (1999) Curr. Opin. Cell Biol. , vol.11 , pp. 363-371
    • Krecic, A.M.1    Swanson, M.S.2
  • 9
    • 0034813301 scopus 로고    scopus 로고
    • Multifunctional regulatory proteins that control gene expression in both the nucleus and the cytoplasm
    • Wilkinson,M.F. and Shyu,A.B. (2001) Multifunctional regulatory proteins that control gene expression in both the nucleus and the cytoplasm. Bioessays, 23, 775-787.
    • (2001) Bioessays , vol.23 , pp. 775-787
    • Wilkinson, M.F.1    Shyu, A.B.2
  • 10
    • 0036829064 scopus 로고    scopus 로고
    • Nuclear coupling: RNA processing reaches back to transcription
    • Manley,J.L. (2002) Nuclear coupling: RNA processing reaches back to transcription. Nature Struct. Biol., 9, 790-791.
    • (2002) Nature Struct. Biol. , vol.9 , pp. 790-791
    • Manley, J.L.1
  • 11
    • 0034006399 scopus 로고    scopus 로고
    • Transcription elongation factor SII
    • Wind,M. and Reines,D. (2000) Transcription elongation factor SII. Bioessays, 22, 327-336.
    • (2000) Bioessays , vol.22 , pp. 327-336
    • Wind, M.1    Reines, D.2
  • 12
    • 0037073048 scopus 로고    scopus 로고
    • Promoting elongation with transcript cleavage stimulatory factors
    • Fish,R.N. and Kane,C.M. (2002) Promoting elongation with transcript cleavage stimulatory factors. Biochim. Biophys. Acta, 1577, 287-307.
    • (2002) Biochim. Biophys. Acta , vol.1577 , pp. 287-307
    • Fish, R.N.1    Kane, C.M.2
  • 13
    • 0043244876 scopus 로고    scopus 로고
    • Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage
    • Kettenberger,H., Armache,K.J. and Cramer,P. (2003) Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage. Cell, 114, 347-357.
    • (2003) Cell , vol.114 , pp. 347-357
    • Kettenberger, H.1    Armache, K.J.2    Cramer, P.3
  • 14
    • 10944232674 scopus 로고    scopus 로고
    • Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS
    • Kettenberger,H., Armache,K.J. and Cramer,P. (2004) Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS. Mol. Cell, 16, 955-965.
    • (2004) Mol. Cell , vol.16 , pp. 955-965
    • Kettenberger, H.1    Armache, K.J.2    Cramer, P.3
  • 15
    • 0030776835 scopus 로고    scopus 로고
    • Interaction of elongation factors TFIIS and elongin A with a human RNA polymerase II holoenzyme capable of promoter-specific initiation and responsive to transcriptional activators
    • Pan,G., Aso,T. and Greenblatt,J. (1997) Interaction of elongation factors TFIIS and elongin A with a human RNA polymerase II holoenzyme capable of promoter-specific initiation and responsive to transcriptional activators. J. Biol. Chem., 272, 24563-24571.
    • (1997) J. Biol. Chem. , vol.272 , pp. 24563-24571
    • Pan, G.1    Aso, T.2    Greenblatt, J.3
  • 16
    • 0032531257 scopus 로고    scopus 로고
    • Identification of novel genes encoding transcription elongation factor TFIIS (TCEA) in vertebrates: Conservation of three distinct TFIIS isoforms in frog, mouse, and human
    • Labhart,P. and Morgan,G.T. (1998) Identification of novel genes encoding transcription elongation factor TFIIS (TCEA) in vertebrates: conservation of three distinct TFIIS isoforms in frog, mouse, and human. Genomics, 52, 278-288.
    • (1998) Genomics , vol.52 , pp. 278-288
    • Labhart, P.1    Morgan, G.T.2
  • 17
    • 0034613297 scopus 로고    scopus 로고
    • Structure of a conserved domain common to the transcription factors TFIIS, elongin A, and CRSP70
    • Booth,V., Koth,C.M., Edwards,A.M. and Arrowsmith,C.H. (2000) Structure of a conserved domain common to the transcription factors TFIIS, elongin A, and CRSP70. J. Biol. Chem., 275, 31266-31268.
    • (2000) J. Biol. Chem. , vol.275 , pp. 31266-31268
    • Booth, V.1    Koth, C.M.2    Edwards, A.M.3    Arrowsmith, C.H.4
  • 18
    • 0033521956 scopus 로고    scopus 로고
    • The transcriptional cofactor complex CRSP is required for activity of the enhancer-binding protein Sp1
    • Ryu,S., Zhou,S., Ladurner,A.G. and Tjian,R. (1999) The transcriptional cofactor complex CRSP is required for activity of the enhancer-binding protein Sp1. Nature, 397, 446-450.
    • (1999) Nature , vol.397 , pp. 446-450
    • Ryu, S.1    Zhou, S.2    Ladurner, A.G.3    Tjian, R.4
  • 20
    • 0029084914 scopus 로고
    • Elongin (SIII): A multisubunit regulator of elongation by RNA polymerase II
    • Aso,T., Lane,W.S., Conaway,J.W. and Conaway,R.C. (1995) Elongin (SIII): a multisubunit regulator of elongation by RNA polymerase II. Science, 269, 1439-1443.
    • (1995) Science , vol.269 , pp. 1439-1443
    • Aso, T.1    Lane, W.S.2    Conaway, J.W.3    Conaway, R.C.4
  • 21
    • 0037135594 scopus 로고    scopus 로고
    • Identification and biochemical characterization of a novel transcription elongation factor, Elongin A3
    • Yamazaki,K., Guo,L., Sugahara,K., Zhang,C., Enzan,H., Nakabeppu,Y., Kitajima,S. and Aso,T. (2002) Identification and biochemical characterization of a novel transcription elongation factor, Elongin A3. J. Biol. Chem., 277, 26444-26451.
    • (2002) J. Biol. Chem. , vol.277 , pp. 26444-26451
    • Yamazaki, K.1    Guo, L.2    Sugahara, K.3    Zhang, C.4    Enzan, H.5    Nakabeppu, Y.6    Kitajima, S.7    Aso, T.8
  • 22
    • 0027324153 scopus 로고
    • Identification and characterization of a sphere organelle protein
    • Tuma,R.S., Stolk,J.A. and Roth,M.B. (1993) Identification and characterization of a sphere organelle protein. J. Cell Biol., 122, 767-773.
    • (1993) J. Cell Biol. , vol.122 , pp. 767-773
    • Tuma, R.S.1    Stolk, J.A.2    Roth, M.B.3
  • 23
    • 0030921505 scopus 로고    scopus 로고
    • Molecular characterization of the B-box protein-protein interaction motif of the ETS-domain transcription factor Elk-1
    • Ling,Y., Lakey,J.H., Roberts,C.E. and Sharrocks,A.D. (1997) Molecular characterization of the B-box protein-protein interaction motif of the ETS-domain transcription factor Elk-1. EMBO J., 16, 2431-2440.
    • (1997) EMBO J. , vol.16 , pp. 2431-2440
    • Ling, Y.1    Lakey, J.H.2    Roberts, C.E.3    Sharrocks, A.D.4
  • 24
    • 0032880336 scopus 로고    scopus 로고
    • Coilin shuttles between the nucleus and cytoplasm in Xenopus oocytes
    • Bellini,M. and Gall,J.G. (1999) Coilin shuttles between the nucleus and cytoplasm in Xenopus oocytes. Mol. Biol. Cell, 10, 3425-3434.
    • (1999) Mol. Biol. Cell , vol.10 , pp. 3425-3434
    • Bellini, M.1    Gall, J.G.2
  • 25
    • 0037345068 scopus 로고    scopus 로고
    • Subnuclear localization and Cajal body targeting of transcription elongation factor TFIIS in amphibian oocytes
    • Smith,A.J., Ling,Y. and Morgan,G.T. (2003) Subnuclear localization and Cajal body targeting of transcription elongation factor TFIIS in amphibian oocytes. Mol. Biol. Cell, 14, 1255-1267.
    • (2003) Mol. Biol. Cell , vol.14 , pp. 1255-1267
    • Smith, A.J.1    Ling, Y.2    Morgan, G.T.3
  • 26
    • 0032562782 scopus 로고    scopus 로고
    • Interaction of transcription factors with serum response factor. Identification of the Elk-1 binding surface
    • Ling,Y., West,A.G., Roberts,E.C., Lakey,J.H. and Sharrocks,A.D. (1998) Interaction of transcription factors with serum response factor. Identification of the Elk-1 binding surface. J. Biol. Chem., 273, 10506-10514.
    • (1998) J. Biol. Chem. , vol.273 , pp. 10506-10514
    • Ling, Y.1    West, A.G.2    Roberts, E.C.3    Lakey, J.H.4    Sharrocks, A.D.5
  • 28
    • 0036010598 scopus 로고    scopus 로고
    • Regulator-driven functional diversification of protein phosphatase-1 in eukaryotic evolution
    • Ceulemans,H., Stalmans,W. and Bollen,M. (2002) Regulator-driven functional diversification of protein phosphatase-1 in eukaryotic evolution. Bioessays, 24, 371-381.
    • (2002) Bioessays , vol.24 , pp. 371-381
    • Ceulemans, H.1    Stalmans, W.2    Bollen, M.3
  • 29
    • 0031583952 scopus 로고    scopus 로고
    • Purification and characterisation of p99, a nuclear modulator of protein phosphatase 1 activity
    • Kreivi,J.P., Trinkle-Mulcahy,L., Lyon,C.E., Morrice,N.A., Cohen,P. and Lamond,A.I. (1997) Purification and characterisation of p99, a nuclear modulator of protein phosphatase 1 activity. FEBS Lett., 420, 57-62.
    • (1997) FEBS Lett. , vol.420 , pp. 57-62
    • Kreivi, J.P.1    Trinkle-Mulcahy, L.2    Lyon, C.E.3    Morrice, N.A.4    Cohen, P.5    Lamond, A.I.6
  • 30
    • 0032512720 scopus 로고    scopus 로고
    • Isolation and characterization of PNUTS, a putative protein phosphatase 1 nuclear targeting subunit
    • Allen,P.B., Kwon,Y.G., Nairn,A.C. and Greengard,P. (1998) Isolation and characterization of PNUTS, a putative protein phosphatase 1 nuclear targeting subunit. J. Biol. Chem., 273, 4089-4095.
    • (1998) J. Biol. Chem. , vol.273 , pp. 4089-4095
    • Allen, P.B.1    Kwon, Y.G.2    Nairn, A.C.3    Greengard, P.4
  • 31
    • 0141532093 scopus 로고    scopus 로고
    • Identification of mammalian Vps24p as an effector of phosphatidylinositol 3,5-bisphosphate-dependent endosome compartmentalization
    • Whitley,P., Reaves,B.J., Hashimoto,M., Riley,A.M., Potter,B.V. and Holman,G.D. (2003) Identification of mammalian Vps24p as an effector of phosphatidylinositol 3,5-bisphosphate-dependent endosome compartmentalization. J. Biol. Chem., 278, 38786-38795.
    • (2003) J. Biol. Chem. , vol.278 , pp. 38786-38795
    • Whitley, P.1    Reaves, B.J.2    Hashimoto, M.3    Riley, A.M.4    Potter, B.V.5    Holman, G.D.6
  • 34
    • 12244277380 scopus 로고    scopus 로고
    • SPN1, a conserved gene identified by suppression of a postrecruitment-defective yeast TATA-binding protein mutant
    • Fischbeck,J.A., Kraemer,S.M. and Stargell,L.A. (2002) SPN1, a conserved gene identified by suppression of a postrecruitment-defective yeast TATA-binding protein mutant. Genetics, 162, 1605-1616.
    • (2002) Genetics , vol.162 , pp. 1605-1616
    • Fischbeck, J.A.1    Kraemer, S.M.2    Stargell, L.A.3
  • 35
    • 0037382227 scopus 로고    scopus 로고
    • Transcription elongation by RNA polymerase II
    • Hartzog,G.A. (2003) Transcription elongation by RNA polymerase II. Curr. Opin. Genet. Dev., 13, 119-126.
    • (2003) Curr. Opin. Genet. Dev. , vol.13 , pp. 119-126
    • Hartzog, G.A.1
  • 36
    • 0037569617 scopus 로고    scopus 로고
    • Identification of a novel tissue-specific transcriptional activator FESTA as a protein that interacts with the transcription elongation factor S-II
    • Saso,K., Ito,T., Natori,S. and Sekimizu,K. (2003) Identification of a novel tissue-specific transcriptional activator FESTA as a protein that interacts with the transcription elongation factor S-II. J. Biochem., 133, 493-500.
    • (2003) J. Biochem. , vol.133 , pp. 493-500
    • Saso, K.1    Ito, T.2    Natori, S.3    Sekimizu, K.4
  • 37
    • 0031707505 scopus 로고    scopus 로고
    • Nucleocytoplasmic transport: The soluble phase
    • Mattaj,I.W. and Englmeier,L. (1998) Nucleocytoplasmic transport: The soluble phase. Ann. Rev. Biochem., 67, 265-306.
    • (1998) Ann. Rev. Biochem. , vol.67 , pp. 265-306
    • Mattaj, I.W.1    Englmeier, L.2
  • 38
    • 0028930155 scopus 로고
    • A nuclear localization domain in the hnRNP A1 protein
    • Siomi,H. and Dreyfuss,G. (1995) A nuclear localization domain in the hnRNP A1 protein. J. Cell Biol., 129, 551-560.
    • (1995) J. Cell Biol. , vol.129 , pp. 551-560
    • Siomi, H.1    Dreyfuss, G.2
  • 39
    • 0028963968 scopus 로고
    • Nucleo-cytoplasmic distribution of human hnRNP proteins: A search for the targeting domains in hnRNP A1
    • Weighardt,F., Biamonti,G. and Riva,S. (1995) Nucleo-cytoplasmic distribution of human hnRNP proteins: A search for the targeting domains in hnRNP A1. J. Cell Sci., 108, 545-555.
    • (1995) J. Cell Sci. , vol.108 , pp. 545-555
    • Weighardt, F.1    Biamonti, G.2    Riva, S.3
  • 40
    • 0027105007 scopus 로고
    • A knowledge base for predicting protein localization sites in eukaryotic cells
    • Nakai,K. and Kanehisa,M. (1992) A knowledge base for predicting protein localization sites in eukaryotic cells. Genomics, 14, 897-911.
    • (1992) Genomics , vol.14 , pp. 897-911
    • Nakai, K.1    Kanehisa, M.2
  • 41
    • 0030924190 scopus 로고    scopus 로고
    • CRM1 is an export receptor for leucine-rich nuclear export signals
    • Fornerod,M., Ohno,M., Yoshida,M. and Mattaj,I.W. (1997) CRM1 is an export receptor for leucine-rich nuclear export signals. Cell, 90, 1051-1060.
    • (1997) Cell , vol.90 , pp. 1051-1060
    • Fornerod, M.1    Ohno, M.2    Yoshida, M.3    Mattaj, I.W.4
  • 42
    • 0032517779 scopus 로고    scopus 로고
    • A novel nuclear import pathway for the transcription factor TFIIS
    • Albertini,M., Pemberton,L.F., Rosenblum,J.S. and Blobel,G. (1998) A novel nuclear import pathway for the transcription factor TFIIS. J. Cell Biol., 143, 1447-1455.
    • (1998) J. Cell Biol. , vol.143 , pp. 1447-1455
    • Albertini, M.1    Pemberton, L.F.2    Rosenblum, J.S.3    Blobel, G.4
  • 43
    • 0032760517 scopus 로고    scopus 로고
    • Nuclear localization of Schizosaccharomyces pombe Mcm2/Cdc19p requires MCM complex assembly
    • Pasion,S.G. and Forsburg,S.L. (1999) Nuclear localization of Schizosaccharomyces pombe Mcm2/Cdc19p requires MCM complex assembly. Mol. Biol. Cell, 10, 4043-4057.
    • (1999) Mol. Biol. Cell , vol.10 , pp. 4043-4057
    • Pasion, S.G.1    Forsburg, S.L.2
  • 44
    • 0035312713 scopus 로고    scopus 로고
    • Different dynamics in nuclear entry of subunits of the repair/transcription factor TFIIH
    • Santagati,F., Botta,E., Stefanini,M. and Pedrini,A.M. (2001) Different dynamics in nuclear entry of subunits of the repair/transcription factor TFIIH. Nucleic Acids Res., 29, 1574-1581.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 1574-1581
    • Santagati, F.1    Botta, E.2    Stefanini, M.3    Pedrini, A.M.4
  • 45
    • 0042736180 scopus 로고    scopus 로고
    • Identification of EloA-BP1, a novel Elongin A binding protein with an exonuclease homology domain
    • Tamura,K., Miyata,K., Sugahara,K., Onishi,S., Shuin,T. and Aso,T. (2003) Identification of EloA-BP1, a novel Elongin A binding protein with an exonuclease homology domain. Biochem. Biophys. Res. Commun., 309, 189-195.
    • (2003) Biochem. Biophys. Res. Commun. , vol.309 , pp. 189-195
    • Tamura, K.1    Miyata, K.2    Sugahara, K.3    Onishi, S.4    Shuin, T.5    Aso, T.6
  • 46
    • 9144246231 scopus 로고    scopus 로고
    • Members of the SAGA and mediator complexes are partners of the transcription elongation factor TFIIS
    • Wery,M., Shematorova,E., Van Driessche,B., Vandenhaute,J., Thuriaux,P. and Van Mullem,V. (2004) Members of the SAGA and mediator complexes are partners of the transcription elongation factor TFIIS. EMBO J., 23, 4232-4242.
    • (2004) EMBO J. , vol.23 , pp. 4232-4242
    • Wery, M.1    Shematorova, E.2    Van Driessche, B.3    Vandenhaute, J.4    Thuriaux, P.5    Van Mullem, V.6
  • 47
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson,J.D., Higgins,D.G. and Gibson,T.J. (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.