Subnuclear localization and Cajal body targeting of transcription elongation factor TFIIS in amphibian oocytes

Molecular Biology of the Cell

Volumn 14, Issue 3, 2003, Pages 1255-1267

  Smith, Abigail J ^a,b   Ling, Yan ^a   Morgan, Garry T ^a  

^a UNIVERSITY OF NOTTINGHAM   (United Kingdom)

^b UNIVERSITY OF BRISTOL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ELONGATION FACTOR; RNA POLYMERASE II;

AMPHIBIA; ANIMAL CELL; ARTICLE; CELLULAR DISTRIBUTION; COILED BODY; FEMALE; FLUORESCENCE MICROSCOPY; GENE EXPRESSION; GENETIC TRANSCRIPTION; IMMUNOBLOTTING; NONHUMAN; OOCYTE; PRIORITY JOURNAL; XENOPUS;

AMINO ACID SEQUENCE; ANIMALS; CELL NUCLEUS; COILED BODIES; MUTAGENESIS, SITE-DIRECTED; OOCYTES; PROTEIN ISOFORMS; PROTEIN TRANSPORT; TRANSCRIPTION FACTORS, GENERAL; TRANSCRIPTION, GENETIC; TRANSCRIPTIONAL ELONGATION FACTORS; XENOPUS LAEVIS;

AMPHIBIA; ANIMALIA;

EID: 0037345068     PISSN: 10591524     EISSN: None     Source Type: Journal    
DOI: 10.1091/mbc.E02-09-0601     Document Type: Article

References (45)

1. Abbott, J., Marzluff, W.F., and Gall, J.G. (1999). The stem-loop binding protein (SLBP1) is present in coiled bodies of the Xenopus germinal vesicle. Mol. Biol. Cell 10, 487-499.
2. Awrey, D.E. et al. (1998). Yeast transcript elongation factor (TFIIS), structure and function. II: RNA polymerase binding, transcript cleavage, and read-through. J. Biol. Chem. 273, 22595-22605.
3. Booth, V., Koth, C.M., Edwards, A.M., and Arrowsmith, C.H. (2000). Structure of a conserved domain common to the transcription factors TFIIS, elongin A, and CRSP70. J. Biol. Chem. 275, 31266-31268.
4. Bucci, S., Giani, L., Mancino, G., Peilegrino, M., and Ragghianti, M. (2001). TAFII70 protein in Cajal bodies of the amphibian germinal vesicle. Genome 44, 1100-1103.
5. Callan, H.G. (1986). Lampbrush Chromosomes. Springer-Verlag: Berlin.
6. Ciprés-Palacín, G., and Kane, C.M. (1995). Alanine-scanning mutagenesis of human transcript elongation factor TFIIS. Biochemistry 34, 15375-15380.
7. Doyle, O., Corden, J.L., Murphy, C., and Gall, J.G. (2002). The distribution of RNA polymerase 11 largest subunit (RPB1) in the Xenopus germinal vesicle. J. Struct. Biol. 140, 154-156.
8. Dundr, M., and Misteli, T. (2001). Functional architecture in the cell nucleus. Biochem. J. 356, 297-310.
9. Evan, G.I., Lewis, G.K, Ramsay, G., and Bishop, J.M. (1985). Isolation of monoclonal antibodies specific for human c-myc proto- oncogene product. Mol. Cell. Biol. 5, 3610-3616.
10. Gall, J.G. (1992). Organelle assembly and function in the amphibian germinal vesicle. Adv. Dev. Biochem. 1, 1-29.
11. Gall, J.G. (2000). Cajal bodies: the first 100 years. Ann. Rev. Cell Dev. Biol. 16, 273-300.
12. Gall, J.G., Bellini, M., Wu, Z., and Murphy, C. (1999). Assembly of the nuclear transcription and processing machinery: Cajal bodies (coiled bodies) and transcriptosomes. Mol. Biol. Cell 10, 4385-4402.
13. Gall, J.G., and Murphy, C. (1998). Assembly of lampbrush chromosomes from sperm chromatin. Mol. Biol. Cell 9, 733-747.
14. Gall, J.G., Murphy, C., Callan, H.G., and Wu, Z.A. (1991). Lampbrush chromosomes. Methods Cell Biol 36, 149-166.
15. Gall, J.G., Tsvetkov, A., Wu, Z., and Murphy, C. (1995). Is the sphere organelle/coiled body a universal nuclear component? Dev. Genet. 16, 25-35.
16. Harlow, E., and Lane, D. (1999). Using Antibodies. A Laboratory Manual. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
17. Hirose, Y., and Manley, J.L. (2000). RNA polymerase 11 and the integration of nuclear events. Genes Dev. 14, 1415-1429.
18. Ishiguro, A., Nogi, Y., Hisatake, K., Muramatsu, M., and Ishihama, A. (2000). The Rpb6 subunit of fission yeast RNA polyrnerase II is a contact target of the transcription elongation factor TFIIS. Mol. Cell. Biol. 20, 1263-1270.
19. Jantsch, M.F., and Gall, J.G. (1992). Assembly and localization of the Ul-specific snRNP C protein in the amphibian oocyte. J. Cell Biol. 119, 1037-1046.
20. Labhart, P. (1997). Transcript cleavage in an RNA polymerase I elongation complex. Evidence for a dissociable activity similar to but distinct from TFIIS. J. Biol. Chem. 272, 9055-9061.
21. Labhart, P., and Morgan, G.T. (1998). Identification of novel genes encoding transcription elongation factor TFIIS (TCEA) in vertebrates: conservation of three distinct TFIIS isoforms in frog, mouse, and human. Genomics 52, 278-288.
22. Lennon, J. C., 3rd, Wind, M., Saunders, L., Hock, M.B., and Reines, D. (1998). Mutations in RNA polymerase II and elongation factor SII severely reduce mRNA levels in Saccharomyces cerevisiae. Mol. Cell. Biol. 18, 5771-5779.
23. Matera, A.G. (1999). Nuclear bodies: multifaceted subdomains of the interchromatin space. Trends Cell Biol. 9, 302-309.
24. Miller, O.L., Jr., and Hamkalo, B.A. (1972). Visualization of RNA synthesis on chromosomes. Int. Rev. Cytol. 33, 1-25.
25. Misteli, T. (2001). Protein dynamics: implications for nuclear architecture and gene expression. Science 291, 843-847.
26. Morgan, G.T. (2002). Lampbrush chromosomes and associated bodies: new insights into principles of nuclear structure and function. Chromosome Res. 10, 177-200.
27. Morgan, G.T., Doyle, O., Murphy, C., and Gall, J.G. (2000). RNA polymerase II in Cajal bodies of amphibian oocytes. J. Struct. Biol. 129, 258-268.
28. Morin, P.E., Awrey, D.E., Edwards, A.M., and Arrowsmith, C.H. (1996). Elongation factor TFIIS contains three structural domains: solution structure of domain II. Proc. Natl. Acad. Sci. USA 93, 10604-10608.
29. Murphy, C., Wang, Z., Roeder, R.G., and Gall, J.G. (2002). RNA Polymerase III in Cajal bodies and lampbrush chromosomes of the Xenopus oocyte nucleus. Mol. Biol. Cell 13, 3466-3476.
30. Myer, V.E., and Young, R.A. (1998). RNA polymerase II holoenzymes and subcomplexes. J. Biol. Chem. 273, 27757-27760.
31. Olmsted, V.K., Awrey, D.E., Koth, C., Shan, X., Morin, P.E., Kazanis, S., Edwards, A.M., and Arrowsmith, C.H. (1998). Yeast transcript elongation factor (TFIIS), structure and finction. I: NMR structural analysis of the minimal transcriptionally active region. J. Biol. Chem. 273, 22589-22594.
32. Pan, G., Aso, T., and Greenblatt, J. (1997). Interaction of elongation factors TFIIS and elongin A with a human RNA polymerase II holoenzyme capable of promoter-specific initiation and responsive to transcriptional activators. J. Biol. Chem. 272, 24363-24571.
33. Plant, K.E., Hair, A., and Morgan, G.T. (1996). Genes encoding isoforms of transcription elongation factor TFIIS in Xenopus and the use of multiple unusual RNA processing signals. Nucleic Acids Res. 24, 3514-3521.
34. Pokholok, D.K., Hannett, N.M., and Young, R.A. (2002). Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo. Mol. Cell 9, 799-809.
35. Qian, X., Gozani, S.N., Yoon, H., Jeon, C.J., Agarwal, K., and Weiss, M.A. (1993). Novel zinc finger motif in the basal transcriptional machinery: three-dimensional NMR studies of the nucleic acid binding domain of transcriptional elongation factor TFIIS. Biochemistry 32, 9944-9959.
36. Robert, F., Blanchette, M., Maes, O., Chabot, B., and Coulombe, B. (2002). A human RNA polymerase II-containing complex associated with factors necessary for spliceosome assembly. J. Biol. Chem. 277, 9302-9306.
37. Scheer, U., Franke, W.W., Trendelenburg, M.F., and Spring, H. (1976). Classification of loops of lampbrush chromosomes according to the arrangement of transcriptional complexes. J. Cell Sci. 22, 503-519.
38. Shimasaki, N.B., and Kane, C.M. (2000). Structural basis for the speciesspecific activity of TFIIS. J. Biol. Chem. 275, 36541-36549.
39. Taira, Y., Kubo, T., and Natori, S. (1998). Molecular cloning of cDNA and tissue-specific expression of the gene for SII-K1, a novel transcription elongation factor SII. Genes Cells 3, 289-296.
40. Taira, Y., Kubo, T., and Natori, S. (2000). Participation of transcription elongation factor XSII-K1 in mesoderm-derived tissue development in Xenopus laevis. J. Biol. Chem. 275, 32011-32015.
41. Tuma, R.S., Stolk, J.A., and Roth, M.B. (1993). Identification and characterization of a sphere organelle protein. J. Cell Biol. 122, 767-773.
42. Warren, S.L., Landolfi, A.S., Curtis, C., and Morrow, J.S.W. (1992). Cytostellin: a novel, highly conserved protein that undergoes continuous redistribution during the cell cycle. J. Cell Sci. 103, 381-388.
43. Wind, M., and Reines, D. (2000). Transcription elongation factor SII. Bioessays 22, 327-336.
44. Wu, J., Awrey, D.E., Edwards, A.M., Archambault, J., and Friesen, J.D. (1996). In vitro characterization of mutant yeast RNA polymerase II with reduced binding for elongation factor TFIIS. Proc. Natl. Acad. Sci. USA 93, 11552-11557.
45. Wu, Z., Murphy, C., and Gall, J.G. (1994). Human p80-coilin is targeted to sphere organelles in the amphibian germinal vesicle. Mol. Biol. Cell 5, 1119-1127.