A unified nomenclature for protein subunits of mediator complexes linking transcriptional regulators to RNA polymerase II

Molecular Cell

Volumn 14, Issue 5, 2004, Pages 553-557

  Bourbon, Henri Marc ^a   Aguilera, Andres ^b   Ansari, Aseem Z ^c   Asturias, Francisco J ^d   Berk, Arnold J ^e   Bjorklund, Stefan ^f   Blackwell, T Keith ^g   Borggrefe, Tilman ^h   Carey, Michael ⁱ   Carlson, Marian ^j   Conaway, Joan W ^k   Conaway, Ronald C ^k   Emmons, Scott W ^l   Fondell, Joseph D ^m   Freedman, Leonard P ⁿ   Fukasawa, Toshio ^o   Gustafsson, Claes M ^p   Han, Min ^q   He, Xi ^r   Herman, Paul K ^s   Hinnebusch, Alan G ^t   Holmberg, Steen ^u   Holstege, Frank C ^v   Jaehning, Judith A ^w   Kim, Young Joon ^x   Kuras, Laurent ^y   Leutz, Achim ^z   Lis, John T ^aa   Meisterernest, Michael ^ab   Naar, Anders M ^ac   Nasmyth, Kim ^ad   Parvin, Jeffrey D ^ae   Ptashne, Mark ^af   Reinberg, Danny ^ag   Ronne, Hans ^ah,ai   Sadowski, Ivan ^aj   Sakurai, Hiroshi ^ak   Sipiczki, Matthias ^al   Sternberg, Paul W ^ag   Stillman, David J ^am   Strich, Randy ^an   Struhl, Kevin ^ao   Svejstrup, Jasper Q ^ap   Tuck, Simon ^f   Winston, Fred ^ao   Roeder, Robert G ^aq   Kornberg, Roger D ^ar   more..

^a UNIVERSITÉ PAUL SABATIER   (France)

^b UNIVERSITY OF SEVILLE   (Spain)

^c UNIVERSITY OF WISCONSIN MADISON   (United States)

^d SCRIPPS RESEARCH INSTITUTE   (United States)

^e UNIVERSITY OF CALIFORNIA   (United States)

^f UMEÅ UNIVERSITY   (Sweden)

^g JOSLIN DIABETES CENTER   (United States)

^h UNIVERSITY OF ULM   (Germany)

ⁱ UNIVERSITY OF CALIFORNIA   (United States)

^j Colum0bia University ^*  (United States)

^k STOWERS INSTITUTE FOR MEDICAL RESEARCH   (United States)

^l ALBERT EINSTEIN COLLEGE OF MEDICINE   (United States)

^m RUTGERS ROBERT WOOD JOHNSON MEDICAL SCHOOL   (United States)

ⁿ MERCK RESEARCH LABORATORIES   (United States)

^o KEIO UNIVERSITY   (Japan)

^p KAROLINSKA INSTITUTE   (Sweden)

^q UNIVERSITY OF COLORADO   (United States)

^r BOSTON CHILDREN S HOSPITAL   (United States)

^s OHIO STATE UNIVERSITY   (United States)

^t EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH AND HUMAN DEVELOPMENT   (United States)

^u INSTITUTE OF MOLECULAR BIOLOGY   (Armenia)

^v UNIVERSITY MEDICAL CENTER UTRECHT   (Netherlands)

^w UNIVERSITY OF COLORADO   (United States)

^x Yonsei University   (South Korea)

^y CENTRE DE GÉNÉTIQUE MOLÉCULAIRE   (France)

^z MAX DELBRÜCK CENTER FOR MOLECULAR MEDICINE   (Germany)

^aa Cornell University ^*  (United States)

^ab INSTITUTE OF EPIDEMIOLOGY   (Germany)

^ac MASSACHUSETTS GENERAL HOSPITAL CANCER CENTER   (United States)

^ad RESEARCH INSTITUTE OF MOLECULAR PATHOLOGY   (Austria)

^ae BRIGHAM AND WOMEN S HOSPITAL   (United States)

^af MEMORIAL SLOAN KETTERING CANCER CENTER   (United States)

^ag HOWARD HUGHES MEDICAL INSTITUTE   (United States)

^ah UPPSALA UNIVERSITY   (Sweden)

^ai SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^aj UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^ak KANAZAWA UNIVERSITY   (Japan)

^al UNIVERSITY OF DEBRECEN   (Hungary)

^am UNIVERSITY OF UTAH HEALTH SCIENCES CENTER   (United States)

^an FOX CHASE CANCER CENTER   (United States)

^ao HARVARD MEDICAL SCHOOL   (United States)

^ap IMPERIAL CANCER RESEARCH FUND   (United Kingdom)

^aq ROCKEFELLER UNIVERSITY   (United States)

^ar STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

more..

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN SUBUNIT; RNA POLYMERASE II; TRANSCRIPTION FACTOR;

BIOINFORMATICS; COMPLEX FORMATION; HUMAN; LETTER; NOMENCLATURE; NONHUMAN; PROTEIN ANALYSIS; TRANSCRIPTION REGULATION;

GENES, REGULATOR; MACROMOLECULAR SUBSTANCES; PHYLOGENY; PROTEIN SUBUNITS; RNA POLYMERASE II; SACCHAROMYCES CEREVISIAE PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID; TERMINOLOGY; TRANS-ACTIVATORS;

EID: 2942610696     PISSN: 10972765     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molcel.2004.05.011     Document Type: Letter

References (49)

1. Asturias F.J., Jiang Y.W., Myers L.C., Gustafsson C.M., Kornberg R.D. Science. 283:1999;985-987
2. Barberis A., Pearlberg J., Simkovich N., Farrell S., Reinagel P., Bamdad C., Sigal G., Ptashne M. Cell. 81:1995;359-368
3. Borggrefe T., Davis R., Erdjument-Bromage H., Tempst P., Kornberg R.D. J. Biol. Chem. 277:2002;44202-44207
4. Boube M., Joulia L., Cribbs D.L., Bourbon H.M. Cell. 110:2002;143-151
5. Boyer T.G., Martin M.E., Lees E., Ricciardi R.P., Berk A.J. Nature. 399:1999;276-279
6. Carlson M. Annu. Rev. Cell Dev. Biol. 13:1997;1-23
7. Chao D.M., Gadbois E.L., Murray P.J., Anderson S.F., Sonu M.S., Parvin J.D., Young R.A. Nature. 380:1996;82-85
8. Flanagan P.M., Kelleher R.J. 3rd, Sayre M.H., Tschochner H., Kornberg R.D. Nature. 350:1991;436-438
9. Fondell J.D., Ge H., Roeder R.G. Proc. Natl. Acad. Sci. USA. 93:1996;8329-8333
10. Gill G., Ptashne M. Nature. 334:1988;721-724
11. Gu J.Y., Park J.M., Song E.J., Mizuguchi G., Yoon J.H., Kim-Ha J., Lee K.J., Kim Y.J. J. Biol. Chem. 277:2002;27154-27161
12. Gu W., Malik S., Ito M., Yuan C.X., Fondell J.D., Zhang X., Martinez E., Qin J., Roeder R.G. Mol. Cell. 3:1999;97-108
13. Gustafsson C.M., Samuelsson T. Mol. Microbiol. 41:2001;1-8
14. Holstege F.C., Jennings E.G., Wyrick J.J., Lee T.I., Hengartner C.J., Green M.R., Golub T.R., Lander E.S., Young R.A. Cell. 95:1998;717-728
15. Ito M., Yuan C.X., Malik S., Gu W., Fondell J.D., Yamamura S., Fu Z.Y., Zhang X., Qin J., Roeder R.G. Mol. Cell. 3:1999;361-370
16. Jiang Y.W., Veschambre P., Erdjument-Bromage H., Tempst P., Conaway J.W., Conaway R.C., Kornberg R.D. Proc. Natl. Acad. Sci. USA. 95:1998;8538-8543
17. Kelleher R.J. 3rd, Flanagan P.M., Kornberg R.D. Cell. 61:1990;1209-1215
18. Kim Y.J., Bjorklund S., Li Y., Sayre M.H., Kornberg R.D. Cell. 77:1994;599-608
19. Koleske A.J., Buratowski S., Nonet M., Young R.A. Cell. 69:1992;883-894
20. Kretzschmar M., Stelzer G., Roeder R.G., Meisterernst M. Mol. Cell. Biol. 14:1994;3927-3937
21. Kwon J.Y., Park J.M., Gim B.S., Han S.J., Lee J., Kim Y.J. Proc. Natl. Acad. Sci. USA. 96:1999;14990-14995
22. Lee T.I., Young R.A. Annu. Rev. Genet. 34:2000;77-137
23. Li Y., Bjorklund S., Jiang Y.W., Kim Y.J., Lane W.S., Stillman D.J., Kornberg R.D. Proc. Natl. Acad. Sci. USA. 92:1995;10864-10868
24. Malik S., Roeder R.G. Trends Biochem. Sci. 25:2000;277-283
25. Malik S., Gu W., Wu W., Qin J., Roeder R.G. Mol. Cell. 5:2000;753-760
26. Meisterernst M., Roy A.L., Lieu H.M., Roeder R.G. Cell. 66:1991;981-993
27. Mittler G., Stuhler T., Santolin L., Uhlmann T., Kremmer E., Lottspeich F., Berti L., Meisterernst M. EMBO J. 22:2003;6494-6504
28. Myers L.C., Kornberg R.D. Annu. Rev. Biochem. 69:2000;729-749
29. Myers L.C., Gustafsson C.M., Bushnell D.A., Lui M., Erdjument-Bromage H., Tempst P., Kornberg R.D. Genes Dev. 12:1998;45-54
30. Naar A.M., Beaurang P.A., Zhou S., Abraham S., Solomon W., Tjian R. Nature. 398:1999;828-832
31. Nonet M.L., Young R.A. Genetics. 123:1989;715-724
32. Novatchkova M., Eisenhaber F. Curr. Biol. 14:2004;R54-R55
33. Park J.M., Gim B.S., Kim J.M., Yoon J.H., Kim H.S., Kang J.G., Kim Y.J. Mol. Cell. Biol. 21:2001;2312-2323
34. Rachez C., Freedman L.P. Curr. Opin. Cell Biol. 13:2001;274-280
35. Rachez C., Lemon B.D., Suldan Z., Bromleigh V., Gamble M., Naar A.M., Erdjument-Bromage H., Tempst P., Freedman L.P. Nature. 398:1999;824-828
36. Ryu S., Zhou S., Ladurner A.G., Tjian R. Nature. 397:1999;446-450
37. Sakurai H., Fukasawa T. J. Biol. Chem. 275:2000;37251-37256
38. Samuelsen C.O., Baraznenok V., Khorosjutina O., Spahr H., Kieselbach T., Holmberg S., Gustafsson C.M. Proc. Natl. Acad. Sci. USA. 100:2003;6422-6427
39. Sato S., Tomomori-Sato C., Banks C.A., Parmely T.J., Sorokina I., Brower C.S., Conaway R.C., Conaway J.W. J. Biol. Chem. 278:2003;49671-49674. a
40. Sato S., Tomomori-Sato C., Banks C.A., Sorokina I., Parmely T.J., Kong S.E., Jin J., Cai Y., Lane W.S., Brower C.S., et al. J. Biol. Chem. 278:2003;15123-15127. b
41. Song W., Treich I., Qian N., Kuchin S., Carlson M. Mol. Cell. Biol. 16:1996;115-120
42. Spahr H., Samuelsen C.O., Baraznenok V., Ernest I., Huylebroeck D., Remacle J.E., Samuelsson T., Kieselbach T., Holmberg S., Gustafsson C.M. Proc. Natl. Acad. Sci. USA. 98:2001;11985-11990
43. Sun X., Zhang Y., Cho H., Rickert P., Lees E., Lane W., Reinberg D. Mol. Cell. 2:1998;213-222
44. Suzuki Y., Nogi Y., Abe A., Fukasawa T. Mol. Cell. Biol. 8:1988;4991-4999
45. Thompson C.M., Young R.A. Natl. Acad. Sci. USA. 92:1995;4587-4590
46. Thompson C.M., Koleske A.J., Chao D.M., Young R.A. Cell. 73:1993;1361-1375
47. Tomomori-Sato C., Sato S., Parmely T.J., Banks C.A., Sorokina I., Florens L., Zybailov B., Washburn M.P., Brower C.S., Conaway R.C., et al. J. Biol. Chem. 279:2004;5846-5851
48. Woychik N.A., Hampsey M. Cell. 108:2002;453-463
49. Yang F., DeBeaumont R., Zhou S., Naar A.M. Proc. Natl. Acad. Sci. USA. 101:2004;2339-2344