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Volumn 79, Issue 21, 2005, Pages 13572-13578

Stochastic interplay between mutation and recombination during the acquisition of drug resistance mutations in human immunodeficiency virus type 1

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTIC RESISTANCE; ARTICLE; EFFECTIVE POPULATION SIZE; HUMAN IMMUNODEFICIENCY VIRUS 1; MUTATION RATE; POPULATION GENETICS; PRIORITY JOURNAL; SIMULATION; STOCHASTIC MODEL; THEORY; VIRUS MUTANT; VIRUS MUTATION; VIRUS RECOMBINATION; VIRUS REPLICATION; VIRUS STRAIN;

EID: 27144440023     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.79.21.13572-13578.2005     Document Type: Article
Times cited : (76)

References (42)
  • 2
    • 0032566768 scopus 로고    scopus 로고
    • Why sex and recombination?
    • Barton, N. H., and B. Charlesworth. 1998. Why sex and recombination? Science 281:1986-1990.
    • (1998) Science , vol.281 , pp. 1986-1990
    • Barton, N.H.1    Charlesworth, B.2
  • 5
    • 0030902875 scopus 로고    scopus 로고
    • Pre-existence and emergence of drug resistance in HIV-1 infection
    • Bonhoeffer, S., and M. A. Nowak. 1997. Pre-existence and emergence of drug resistance in HIV-1 infection. Proc. R. Soc. Lond. B Biol. Sci. 264:631-637.
    • (1997) Proc. R. Soc. Lond. B Biol. Sci. , vol.264 , pp. 631-637
    • Bonhoeffer, S.1    Nowak, M.A.2
  • 6
    • 1042291295 scopus 로고    scopus 로고
    • Recombination in HIV and the evolution of drug resistance: For better or for worse?
    • Bretscher, M. T., C. L. Althaus, V. Muller, and S. Bonhoeffer. 2004. Recombination in HIV and the evolution of drug resistance: for better or for worse? Bioessays 26:180-188.
    • (2004) Bioessays , vol.26 , pp. 180-188
    • Bretscher, M.T.1    Althaus, C.L.2    Muller, V.3    Bonhoeffer, S.4
  • 7
    • 0031179130 scopus 로고    scopus 로고
    • Recombination in HIV: An important viral evolutionary strategy
    • Burke, D. S. 1997. Recombination in HIV: an important viral evolutionary strategy. Emerg. Infect. Dis. 3:253-259.
    • (1997) Emerg. Infect. Dis. , vol.3 , pp. 253-259
    • Burke, D.S.1
  • 8
    • 0032100195 scopus 로고    scopus 로고
    • Waiting with and without recombination: The time to production of a double mutant
    • Christiansen, F. B., S. P. Otto, A. Bergman, and M. W. Feldman. 1998. Waiting with and without recombination: the time to production of a double mutant. Theor. Popul. Biol. 53:199-215.
    • (1998) Theor. Popul. Biol. , vol.53 , pp. 199-215
    • Christiansen, F.B.1    Otto, S.P.2    Bergman, A.3    Feldman, M.W.4
  • 11
    • 0033946764 scopus 로고    scopus 로고
    • Evolution of lamivudine resistance in human immunodeficiency virus type 1-infected individuals: The relative roles of drift and selection
    • Frost, S. D. W., M. Nijhuis, R. Schuurman, C. A. B. Boucher, and A. J. L. Brown. 2000. Evolution of lamivudine resistance in human immunodeficiency virus type 1-infected individuals: the relative roles of drift and selection. J. Virol. 74:6262-6268.
    • (2000) J. Virol. , vol.74 , pp. 6262-6268
    • Frost, S.D.W.1    Nijhuis, M.2    Schuurman, R.3    Boucher, C.A.B.4    Brown, A.J.L.5
  • 12
    • 0035065394 scopus 로고    scopus 로고
    • Estimating mutation rate and generation time from longitudinal samples of DNA sequences
    • Fu, Y. X. 2001. Estimating mutation rate and generation time from longitudinal samples of DNA sequences. Mol. Biol. Evol. 18:620-626.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 620-626
    • Fu, Y.X.1
  • 14
    • 0028884070 scopus 로고
    • Possible involvement of cell fusion and viral recombination in generation of human immunodeficiency virus variants that display dual resistance to AZT and 3TC
    • Gu, Z., Q. Gao, E. A. Faust, and M. A. Wainberg. 1995. Possible involvement of cell fusion and viral recombination in generation of human immunodeficiency virus variants that display dual resistance to AZT and 3TC. J. Gen. Virol. 76:2601-2605.
    • (1995) J. Gen. Virol. , vol.76 , pp. 2601-2605
    • Gu, Z.1    Gao, Q.2    Faust, E.A.3    Wainberg, M.A.4
  • 16
    • 0031958266 scopus 로고    scopus 로고
    • Relative replicative fitness of zidovudine-resistant human immunodeficiency virus type 1 isolates in vitro
    • Harrigan, P. R., S. Bloor, and B. A. Larder. 1998. Relative replicative fitness of zidovudine-resistant human immunodeficiency virus type 1 isolates in vitro. J. Virol. 72:3773-3778.
    • (1998) J. Virol. , vol.72 , pp. 3773-3778
    • Harrigan, P.R.1    Bloor, S.2    Larder, B.A.3
  • 18
    • 0028874048 scopus 로고
    • Rapid turnover of plasma virions and CD4 lymphocytes in HIV-1 infection
    • Ho, D. D., A. V. Neumann, A. S. Perelson, W. Chen, J. M. Leonard, and M. Markowitz. 1995. Rapid turnover of plasma virions and CD4 lymphocytes in HIV-1 infection. Nature 373:123-126.
    • (1995) Nature , vol.373 , pp. 123-126
    • Ho, D.D.1    Neumann, A.V.2    Perelson, A.S.3    Chen, W.4    Leonard, J.M.5    Markowitz, M.6
  • 19
    • 0347991992 scopus 로고    scopus 로고
    • Recombination can evolve in large finite populations given selection on sufficient loci
    • Iles, M. M., K. Walters, and C. Cannings. 2003. Recombination can evolve in large finite populations given selection on sufficient loci. Genetics 165; 2249-2258.
    • (2003) Genetics , vol.165 , pp. 2249-2258
    • Iles, M.M.1    Walters, K.2    Cannings, C.3
  • 21
    • 0028874043 scopus 로고
    • Retroviral recombination can lead to linkage of reverse transcriptase mutations that confer increased zidovudine resistance
    • Kellam, P., and B. A. Larder. 1995. Retroviral recombination can lead to linkage of reverse transcriptase mutations that confer increased zidovudine resistance. J. Virol. 69:669-674.
    • (1995) J. Virol. , vol.69 , pp. 669-674
    • Kellam, P.1    Larder, B.A.2
  • 22
    • 0004732896 scopus 로고    scopus 로고
    • Analysis of HIV-1 env gene sequences reveals evidence for a low effective number in the viral population
    • Leigh Brown, A. J. 1997. Analysis of HIV-1 env gene sequences reveals evidence for a low effective number in the viral population. Proc. Natl. Acad. Sci. USA 94:1862-1865.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 1862-1865
    • Leigh Brown, A.J.1
  • 23
    • 0031054436 scopus 로고    scopus 로고
    • HIV-1: Gambling on the evolution of drug resistance?
    • Leigh Brown, A. J., and D. D. Richman. 1997. HIV-1: gambling on the evolution of drug resistance? Nat. Med. 3:268-271.
    • (1997) Nat. Med. , vol.3 , pp. 268-271
    • Leigh Brown, A.J.1    Richman, D.D.2
  • 24
    • 0036968981 scopus 로고    scopus 로고
    • HIV mutagenesis and the evolution of antiretroviral drug resistance
    • Mansky, L. M. 2002. HIV mutagenesis and the evolution of antiretroviral drug resistance. Drug. Resist. Updates 5:219-223.
    • (2002) Drug. Resist. Updates , vol.5 , pp. 219-223
    • Mansky, L.M.1
  • 25
    • 0033819409 scopus 로고    scopus 로고
    • 3′-azido-3′-deoxythymidine (AZT) and AZT-resistant reverse transcriptase can increase the in vivo mutation rate of human immunodeficiency virus type 1
    • Mansky, L. M., and L. C. Bernard. 2000.3′-Azido-3′- deoxythymidine (AZT) and AZT-resistant reverse transcriptase can increase the in vivo mutation rate of human immunodeficiency virus type 1. J. Virol. 74:9532-9539.
    • (2000) J. Virol. , vol.74 , pp. 9532-9539
    • Mansky, L.M.1    Bernard, L.C.2
  • 26
    • 0036721138 scopus 로고    scopus 로고
    • Combination of drugs and drug-resistant reverse transcriptase results in a multiplicative increase of human immunodeficiency virus type 1 mutant frequencies
    • Mansky, L. M., D. K. Pearl, and L. C. Gajary. 2002. Combination of drugs and drug-resistant reverse transcriptase results in a multiplicative increase of human immunodeficiency virus type 1 mutant frequencies. J. Virol. 76:9253-9259.
    • (2002) J. Virol. , vol.76 , pp. 9253-9259
    • Mansky, L.M.1    Pearl, D.K.2    Gajary, L.C.3
  • 27
    • 0029075130 scopus 로고
    • Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase
    • Mansky, L. M., and H. M. Temin. 1995. Lower in vivo mutation rate of human immunodeficiency virus type 1 than that predicted from the fidelity of purified reverse transcriptase. J. Virol. 69:5087-5094.
    • (1995) J. Virol. , vol.69 , pp. 5087-5094
    • Mansky, L.M.1    Temin, H.M.2
  • 28
    • 0003989558 scopus 로고
    • Columbia University Press, New York, N.Y.
    • Morgan, T. H. 1913. Heredity and sex. Columbia University Press, New York, N.Y.
    • (1913) Heredity and Sex
    • Morgan, T.H.1
  • 29
    • 0029973141 scopus 로고    scopus 로고
    • Recombination leads to the rapid emergence of HIV-1 dually resistant mutants under selective drug pressure
    • Moutouh, L., J. Corbeil, and D. D. Richman. 1996. Recombination leads to the rapid emergence of HIV-1 dually resistant mutants under selective drug pressure. Proc. Natl. Acad. Sci. USA 93:6106-6111.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 6106-6111
    • Moutouh, L.1    Corbeil, J.2    Richman, D.D.3
  • 30
    • 0001224667 scopus 로고
    • Some genetic aspects of sex
    • Muller, H. J. 1932. Some genetic aspects of sex. Am. Nat. 66:118-138.
    • (1932) Am. Nat. , vol.66 , pp. 118-138
    • Muller, H.J.1
  • 31
    • 0032564366 scopus 로고    scopus 로고
    • Stochastic processes strongly influence HIV-1 evolution during suboptimal protease-inhibitor therapy
    • Nijhuis, M., C. A. Boucher, P. Schipper, T. Leitner, R. Schuurman, and J. Albert. 1998. Stochastic processes strongly influence HIV-1 evolution during suboptimal protease-inhibitor therapy. Proc. Natl. Acad. Sci. USA 95:14441-14446.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 14441-14446
    • Nijhuis, M.1    Boucher, C.A.2    Schipper, P.3    Leitner, T.4    Schuurman, R.5    Albert, J.6
  • 32
    • 1042309181 scopus 로고
    • Virus strains of identical phenotype but different genotype
    • Novick, A., and L. Szilard. 1951. Virus strains of identical phenotype but different genotype. Science 113:34-35.
    • (1951) Science , vol.113 , pp. 34-35
    • Novick, A.1    Szilard, L.2
  • 33
    • 0035543310 scopus 로고    scopus 로고
    • Selection for recombination in small populations
    • Otto, S. P., and N. H. Barton. 2001. Selection for recombination in small populations. Evol. Int. J. Org. Evol. 55:1921-1931.
    • (2001) Evol. Int. J. Org. Evol. , vol.55 , pp. 1921-1931
    • Otto, S.P.1    Barton, N.H.2
  • 34
    • 0036209507 scopus 로고    scopus 로고
    • Resolving the paradox of sex and recombination
    • Otto, S. P., and T. Lenormand. 2002. Resolving the paradox of sex and recombination. Nat. Rev. Genet. 3:252-261.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 252-261
    • Otto, S.P.1    Lenormand, T.2
  • 35
    • 0029967721 scopus 로고    scopus 로고
    • HIV-1 dynamics in vivo: Virion clearance rate, infected cell life-span, and viral generation time
    • Perelson, A. S., A. U. Neumann, M. Markowitz, J. M. Leonard, and D. D. Ho, 1996. HIV-1 dynamics in vivo: virion clearance rate, infected cell life-span, and viral generation time. Science 271:1582-1586.
    • (1996) Science , vol.271 , pp. 1582-1586
    • Perelson, A.S.1    Neumann, A.U.2    Markowitz, M.3    Leonard, J.M.4    Ho, D.D.5
  • 36
    • 0034608864 scopus 로고    scopus 로고
    • Production of resistant HIV mutants during antiretroviral therapy
    • Ribeiro, R. M., and S. Bonhoeffer. 2000. Production of resistant HIV mutants during antiretroviral therapy. Proc. Natl. Acad. Sci. USA 97:7681-7686.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 7681-7686
    • Ribeiro, R.M.1    Bonhoeffer, S.2
  • 38
    • 0032824180 scopus 로고    scopus 로고
    • Linkage disequilibrium test implies a large effective population number for HIV in vivo
    • Rouzine, I. M., and J. M. Coffin. 1999. Linkage disequilibrium test implies a large effective population number for HIV in vivo. Proc. Natl. Acad. Sci. USA 96:10758-10763.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 10758-10763
    • Rouzine, I.M.1    Coffin, J.M.2
  • 39
    • 0036234481 scopus 로고    scopus 로고
    • Estimation of effective population size of HIV-1 within a host: A pseudomaximum-likelihood approach
    • Seo, T.-K., J. L. Thorne, M. Hasegawa, and H. Kishino. 2002. Estimation of effective population size of HIV-1 within a host: a pseudomaximum-likelihood approach. Genetics 160:1283-1293.
    • (2002) Genetics , vol.160 , pp. 1283-1293
    • Seo, T.-K.1    Thorne, J.L.2    Hasegawa, M.3    Kishino, H.4
  • 40
    • 1942421715 scopus 로고    scopus 로고
    • Influence of random genetic drift on human immunodeficiency virus type 1 env evolution during chronic infection
    • Shriner, D., R. Shankarappa, M. A. Jensen, D. C. Nickle, J. E. Mittler, J. B. Margolick, and J. I. Mullins. 2004. Influence of random genetic drift on human immunodeficiency virus type 1 env evolution during chronic infection. Genetics 166:1155-1164.
    • (2004) Genetics , vol.166 , pp. 1155-1164
    • Shriner, D.1    Shankarappa, R.2    Jensen, M.A.3    Nickle, D.C.4    Mittler, J.E.5    Margolick, J.B.6    Mullins, J.I.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.