-
1
-
-
4143061452
-
Exploring the structural dynamics of the E. coli chaperonin GroEL using translation-libration-screw crystallographic refinement of intermediate states
-
C. Chaudhry, A.L. Horwich, A.T. Brunger, and P.D. Adams Exploring the structural dynamics of the E. coli chaperonin GroEL using translation-libration- screw crystallographic refinement of intermediate states J Mol Biol 342 2004 229 245
-
(2004)
J Mol Biol
, vol.342
, pp. 229-245
-
-
Chaudhry, C.1
Horwich, A.L.2
Brunger, A.T.3
Adams, P.D.4
-
2
-
-
0037246863
-
MolMovDB: Analysis and visualization of conformational change and structural flexibility
-
N. Echols, D. Milburn, and M. Gerstein MolMovDB: analysis and visualization of conformational change and structural flexibility Nucleic Acids Res 31 2003 478 482
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 478-482
-
-
Echols, N.1
Milburn, D.2
Gerstein, M.3
-
3
-
-
0035354587
-
Time-resolved biochemical crystallography: A mechanistic perspective
-
K. Moffat Time-resolved biochemical crystallography: a mechanistic perspective Chem Rev 101 2001 1569 1581
-
(2001)
Chem Rev
, vol.101
, pp. 1569-1581
-
-
Moffat, K.1
-
4
-
-
0033961309
-
Observation of unstable species in enzyme-catalyzed transformations using protein crystallography
-
G.A. Petsko, and D. Ringe Observation of unstable species in enzyme-catalyzed transformations using protein crystallography Curr Opin Chem Biol 4 2000 89 94
-
(2000)
Curr Opin Chem Biol
, vol.4
, pp. 89-94
-
-
Petsko, G.A.1
Ringe, D.2
-
5
-
-
0033762447
-
Analyzing protein functions in four dimensions
-
J. Hajdu, R. Neutze, T. Sjogren, K. Edman, A. Szoke, R.C. Wilmouth, and C.M. Wilmot Analyzing protein functions in four dimensions Nat Struct Biol 7 2000 1006 1012
-
(2000)
Nat Struct Biol
, vol.7
, pp. 1006-1012
-
-
Hajdu, J.1
Neutze, R.2
Sjogren, T.3
Edman, K.4
Szoke, A.5
Wilmouth, R.C.6
Wilmot, C.M.7
-
6
-
-
0034519834
-
Trapping intermediates in the crystal: Ligand binding to myoglobin
-
I. Schlichting, and K. Chu Trapping intermediates in the crystal: ligand binding to myoglobin Curr Opin Struct Biol 10 2000 744 752
-
(2000)
Curr Opin Struct Biol
, vol.10
, pp. 744-752
-
-
Schlichting, I.1
Chu, K.2
-
7
-
-
0141918782
-
Proteins in action: The physics of structural fluctuations and conformational changes
-
F.G. Parak Proteins in action: the physics of structural fluctuations and conformational changes Curr Opin Struct Biol 13 2003 552 557
-
(2003)
Curr Opin Struct Biol
, vol.13
, pp. 552-557
-
-
Parak, F.G.1
-
8
-
-
0037388383
-
Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations
-
S.J. Johnson, J.S. Taylor, and L.S. Beese Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations Proc Natl Acad Sci USA 100 2003 3895 3900 This fascinating paper illustrates the fact that enzymes can be active in the crystalline form. The authors show that crystalline thermostable Bacillus DNA polymerase I is able to elongate a DNA template by up to six bases, generating the largest structural shift observed in a crystal so far.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 3895-3900
-
-
Johnson, S.J.1
Taylor, J.S.2
Beese, L.S.3
-
9
-
-
0344837328
-
Mycobacterium tuberculosis thymidylate kinase: Structural studies of intermediates along the reaction pathway
-
E. Fioravanti, A. Haouz, T. Ursby, H. Munier-Lehmann, M. Delarue, and D. Bourgeois Mycobacterium tuberculosis thymidylate kinase: structural studies of intermediates along the reaction pathway J Mol Biol 327 2003 1077 1092
-
(2003)
J Mol Biol
, vol.327
, pp. 1077-1092
-
-
Fioravanti, E.1
Haouz, A.2
Ursby, T.3
Munier-Lehmann, H.4
Delarue, M.5
Bourgeois, D.6
-
10
-
-
0037069392
-
The catalytic cycle of beta-lactam synthetase observed by X-ray crystallographic snapshots
-
M.T. Miller, B.O. Bachmann, C.A. Townsend, and A.C. Rosenzweig The catalytic cycle of beta-lactam synthetase observed by X-ray crystallographic snapshots Proc Natl Acad Sci USA 99 2002 14752 14757
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 14752-14757
-
-
Miller, M.T.1
Bachmann, B.O.2
Townsend, C.A.3
Rosenzweig, A.C.4
-
11
-
-
0036016438
-
Photoexcited structure of a plant photoreceptor domain reveals a light-driven molecular switch
-
S. Crosson, and K. Moffat Photoexcited structure of a plant photoreceptor domain reveals a light-driven molecular switch Plant Cell 14 2002 1067 1075
-
(2002)
Plant Cell
, vol.14
, pp. 1067-1075
-
-
Crosson, S.1
Moffat, K.2
-
12
-
-
0037953003
-
Capturing enzyme structure prior to reaction initiation: Tropinone reductase-II-substrate complexes
-
A. Yamashita, M. Endo, T. Higashi, T. Nakatsu, Y. Yamada, J. Oda, and H. Kato Capturing enzyme structure prior to reaction initiation: tropinone reductase-II-substrate complexes Biochemistry 42 2003 5566 5573 A careful study based on the 'steady-state' strategy, using conventional Laue diffraction and a flow cell.
-
(2003)
Biochemistry
, vol.42
, pp. 5566-5573
-
-
Yamashita, A.1
Endo, M.2
Higashi, T.3
Nakatsu, T.4
Yamada, Y.5
Oda, J.6
Kato, H.7
-
13
-
-
0037154146
-
Snapshot of a key intermediate in enzymatic thiamin catalysis: Crystal structure of the alpha-carbanion of (alpha,beta-dihydroxyethyl)-thiamin diphosphate in the active site of transketolase from Saccharomyces cerevisiae
-
E. Fiedler, S. Thorell, T. Sandalova, R. Golbik, S. Konig, and G. Schneider Snapshot of a key intermediate in enzymatic thiamin catalysis: crystal structure of the alpha-carbanion of (alpha,beta-dihydroxyethyl)-thiamin diphosphate in the active site of transketolase from Saccharomyces cerevisiae Proc Natl Acad Sci USA 99 2002 591 595
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 591-595
-
-
Fiedler, E.1
Thorell, S.2
Sandalova, T.3
Golbik, R.4
Konig, S.5
Schneider, G.6
-
14
-
-
0037380836
-
Crystal structures and molecular mechanism of a light-induced signaling switch: The Phot-LOV1 domain from Chlamydomonas reinhardtii
-
•] but not in [11], cysteinyl-flavin bond breakage by the X-rays was observed and a composite data set strategy had to be used. A possible explanation for the difference is that the steady-state illumination during data collection in [11] effectively competed with the effects of X-ray-induced photo-electrons.
-
(2003)
Biophys J
, vol.84
, pp. 2474-2482
-
-
Fedorov, R.1
Schlichting, I.2
Hartmann, E.3
Domratcheva, T.4
Fuhrmann, M.5
Hegemann, P.6
-
15
-
-
0347264753
-
Crystal structure of naphthalene dioxygenase: Side-on binding of dioxygen to iron
-
A. Karlsson, J.V. Parales, R.E. Parales, D.T. Gibson, H. Eklund, and S. Ramaswamy Crystal structure of naphthalene dioxygenase: side-on binding of dioxygen to iron Science 299 2003 1039 1042 An interesting article describing a fortunate case whereby the 'trigger-freeze' approach could be applied very successfully. In a previous paper, the authors had noticed reduction of the enzyme's Rieske iron-sulfur cluster by X-rays.
-
(2003)
Science
, vol.299
, pp. 1039-1042
-
-
Karlsson, A.1
Parales, J.V.2
Parales, R.E.3
Gibson, D.T.4
Eklund, H.5
Ramaswamy, S.6
-
16
-
-
9344249564
-
3-hydroxy-3-methylglutaryl-CoA synthase intermediate complex observed in "real-time"
-
M.J. Theisen, I. Misra, D. Saadat, N. Campobasso, H.M. Miziorko, and D.H. Harrison 3-hydroxy-3-methylglutaryl-CoA synthase intermediate complex observed in "real-time" Proc Natl Acad Sci USA 101 2004 16442 16447
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 16442-16447
-
-
Theisen, M.J.1
Misra, I.2
Saadat, D.3
Campobasso, N.4
Miziorko, H.M.5
Harrison, D.H.6
-
17
-
-
2442545587
-
Dioxygen binds end-on to mononuclear copper in a precatalytic enzyme complex
-
S.T. Prigge, B.A. Eipper, R.E. Mains, and L.M. Amzel Dioxygen binds end-on to mononuclear copper in a precatalytic enzyme complex Science 304 2004 864 867
-
(2004)
Science
, vol.304
, pp. 864-867
-
-
Prigge, S.T.1
Eipper, B.A.2
Mains, R.E.3
Amzel, L.M.4
-
18
-
-
2542488279
-
The reaction mechanism of phospholipase D from Streptomyces sp. strain PMF. Snapshots along the reaction pathway reveal a pentacoordinate reaction intermediate and an unexpected final product
-
I. Leiros, S. McSweeney, and E. Hough The reaction mechanism of phospholipase D from Streptomyces sp. strain PMF. Snapshots along the reaction pathway reveal a pentacoordinate reaction intermediate and an unexpected final product J Mol Biol 339 2004 805 820
-
(2004)
J Mol Biol
, vol.339
, pp. 805-820
-
-
Leiros, I.1
McSweeney, S.2
Hough, E.3
-
19
-
-
2942752112
-
Initial events in the photocycle of photoactive yellow protein
-
R. Kort, K.J. Hellingwerf, and R.B. Ravelli Initial events in the photocycle of photoactive yellow protein J Biol Chem 279 2004 26417 26424 The authors used experimental phases from the photoexcited state to avoid model bias in the computation of difference maps for PYP.
-
(2004)
J Biol Chem
, vol.279
, pp. 26417-26424
-
-
Kort, R.1
Hellingwerf, K.J.2
Ravelli, R.B.3
-
20
-
-
0036452022
-
Specific damage induced by X-ray radiation and structural changes in the primary photoreaction of bacteriorhodopsin
-
Y. Matsui, K. Sakai, M. Murakami, Y. Shiro, S. Adachi, H. Okumura, and T. Kouyama Specific damage induced by X-ray radiation and structural changes in the primary photoreaction of bacteriorhodopsin J Mol Biol 324 2002 469 481
-
(2002)
J Mol Biol
, vol.324
, pp. 469-481
-
-
Matsui, Y.1
Sakai, K.2
Murakami, M.3
Shiro, Y.4
Adachi, S.5
Okumura, H.6
Kouyama, T.7
-
21
-
-
0037161809
-
The catalytic pathway of horseradish peroxidase at high resolution
-
G.I. Berglund, G.H. Carlsson, A.T. Smith, H. Szoke, A. Henriksen, and J. Hajdu The catalytic pathway of horseradish peroxidase at high resolution Nature 417 2002 463 468
-
(2002)
Nature
, vol.417
, pp. 463-468
-
-
Berglund, G.I.1
Carlsson, G.H.2
Smith, A.T.3
Szoke, H.4
Henriksen, A.5
Hajdu, J.6
-
22
-
-
4444294012
-
Structure of superoxide reductase bound to ferrocyanide and active site expansion upon X-ray-induced photo-reduction
-
V. Adam, A. Royant, V. Niviere, F.P. Molina-Heredia, and D. Bourgeois Structure of superoxide reductase bound to ferrocyanide and active site expansion upon X-ray-induced photo-reduction Structure 12 2004 1729 1740 The deliberate use of X-ray-induced photo-electrons allowed the authors to visualize subtle elongation of the active site iron-ligand bonds upon reduction. In contrast to [21], composite data sets were collected on a single crystal and microspectrophotometry was used on-line.
-
(2004)
Structure
, vol.12
, pp. 1729-1740
-
-
Adam, V.1
Royant, A.2
Niviere, V.3
Molina-Heredia, F.P.4
Bourgeois, D.5
-
23
-
-
0038472361
-
Direct observation of photolysis-induced tertiary structural changes in hemoglobin
-
S. Adachi, S.Y. Park, J.R. Tame, Y. Shiro, and N. Shibayama Direct observation of photolysis-induced tertiary structural changes in hemoglobin Proc Natl Acad Sci USA 100 2003 7039 7044 Uncommonly large structural changes were observed upon CO photolysis in the T state of hemoglobin at 25-35 K, well below a dynamical transition. This might originate from the fact that the starting CO-bound structure is heavily strained and that photodissociation releases this strain. In this respect, the system is very original.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 7039-7044
-
-
Adachi, S.1
Park, S.Y.2
Tame, J.R.3
Shiro, Y.4
Shibayama, N.5
-
24
-
-
4143105792
-
CO-trapping site in heme oxygenase revealed by photolysis of its co-bound heme complex: Mechanism of escaping from product inhibition
-
M. Sugishima, H. Sakamoto, M. Noguchi, and K. Fukuyama CO-trapping site in heme oxygenase revealed by photolysis of its co-bound heme complex: mechanism of escaping from product inhibition J Mol Biol 341 2004 7 13
-
(2004)
J Mol Biol
, vol.341
, pp. 7-13
-
-
Sugishima, M.1
Sakamoto, H.2
Noguchi, M.3
Fukuyama, K.4
-
25
-
-
4644242592
-
Structural heterogeneity of cryotrapped intermediates in the bacterial blue light photoreceptor, photoactive yellow protein
-
S. Anderson, V. Srajer, and K. Moffat Structural heterogeneity of cryotrapped intermediates in the bacterial blue light photoreceptor, photoactive yellow protein Photochem Photobiol 80 2004 7 14 The potential complexity of photoexcited cryo-trapped structures is well illustrated by PYP.
-
(2004)
Photochem Photobiol
, vol.80
, pp. 7-14
-
-
Anderson, S.1
Srajer, V.2
Moffat, K.3
-
26
-
-
0347717799
-
Deformation of helix C in the low temperature L-intermediate of bacteriorhodopsin
-
K. Edman, A. Royant, G. Larsson, F. Jacobson, T. Taylor, D. van der Spoel, E.M. Landau, E. Pebay-Peyroula, and R. Neutze Deformation of helix C in the low temperature L-intermediate of bacteriorhodopsin J Biol Chem 279 2004 2147 2158
-
(2004)
J Biol Chem
, vol.279
, pp. 2147-2158
-
-
Edman, K.1
Royant, A.2
Larsson, G.3
Jacobson, F.4
Taylor, T.5
Van Der Spoel, D.6
Landau, E.M.7
Pebay-Peyroula, E.8
Neutze, R.9
-
27
-
-
16344386420
-
Ligand migration and protein fluctuations in myoglobin mutant L29W
-
K. Nienhaus, A. Ostermann, G.U. Nienhaus, F.G. Parak, and M. Schmidt Ligand migration and protein fluctuations in myoglobin mutant L29W Biochemistry 44 2005 5095 5105 The authors devised an elegant 'freeze-trigger' experiment. Using an appropriate temperature profile, they managed to visualize in detail the recombination steps of CO to Mb. The effect of cooling a protein from 300 K to 110 K is remarkably illustrated by drastic changes in the CO stretch bands from in crystallo FT-IR spectra, which correlate with subtle structural modifications seen in the X-ray data.
-
(2005)
Biochemistry
, vol.44
, pp. 5095-5105
-
-
Nienhaus, K.1
Ostermann, A.2
Nienhaus, G.U.3
Parak, F.G.4
Schmidt, M.5
-
28
-
-
22144446020
-
Conformational regulation of charge recombination reactions in a photosynthetic bacterial reaction centre
-
G. Katona, A. Snidjer, P. Gourdon, U. Andreasson, O. Hansson, L. Andreasson, and R. Neutze Conformational regulation of charge recombination reactions in a photosynthetic bacterial reaction centre Nat Struct Mol Biol 12 2005 630 631
-
(2005)
Nat Struct Mol Biol
, vol.12
, pp. 630-631
-
-
Katona, G.1
Snidjer, A.2
Gourdon, P.3
Andreasson, U.4
Hansson, O.5
Andreasson, L.6
Neutze, R.7
-
29
-
-
0041758430
-
Complex landscape of protein structural dynamics unveiled by nanosecond Laue crystallography
-
D. Bourgeois, B. Vallone, F. Schotte, A. Arcovito, A.E. Miele, G. Sciara, M. Wulff, P. Anfinrud, and M. Brunori Complex landscape of protein structural dynamics unveiled by nanosecond Laue crystallography Proc Natl Acad Sci USA 100 2003 8704 8709 A step forward in the quality of ultrafast Laue data. Density maps at 1.6 Å resolution revealed extended structural changes upon CO photolysis in an Mb mutant. These changes affect whole secondary structures (helix E, turn CD) and lag 100 ns behind local rearrangements around the heme, which occur promptly.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 8704-8709
-
-
Bourgeois, D.1
Vallone, B.2
Schotte, F.3
Arcovito, A.4
Miele, A.E.5
Sciara, G.6
Wulff, M.7
Anfinrud, P.8
Brunori, M.9
-
30
-
-
0038047431
-
Watching a protein as it functions with 150-ps time-resolved x-ray crystallography
-
F. Schotte, M. Lim, T.A. Jackson, A.V. Smirnov, J. Soman, J.S. Olson, G.N. Phillips Jr., M. Wulff, and P.A. Anfinrud Watching a protein as it functions with 150-ps time-resolved x-ray crystallography Science 300 2003 1944 1947 The first Laue picosecond data on photodissociated MbCO.
-
(2003)
Science
, vol.300
, pp. 1944-1947
-
-
Schotte, F.1
Lim, M.2
Jackson, T.A.3
Smirnov, A.V.4
Soman, J.5
Olson, J.S.6
Phillips Jr., G.N.7
Wulff, M.8
Anfinrud, P.A.9
-
31
-
-
4344574384
-
Picosecond time-resolved X-ray crystallography: Probing protein function in real time
-
F. Schotte, J. Soman, J.S. Olson, M. Wulff, and P.A. Anfinrud Picosecond time-resolved X-ray crystallography: probing protein function in real time J Struct Biol 147 2004 235 246
-
(2004)
J Struct Biol
, vol.147
, pp. 235-246
-
-
Schotte, F.1
Soman, J.2
Olson, J.S.3
Wulff, M.4
Anfinrud, P.A.5
-
32
-
-
1942469425
-
Time-resolved crystallographic studies of light-induced structural changes in the photosynthetic reaction center
-
R.H. Baxter, N. Ponomarenko, V. Srajer, R. Pahl, K. Moffat, and J.R. Norris Time-resolved crystallographic studies of light-induced structural changes in the photosynthetic reaction center Proc Natl Acad Sci USA 101 2004 5982 5987
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 5982-5987
-
-
Baxter, R.H.1
Ponomarenko, N.2
Srajer, V.3
Pahl, R.4
Moffat, K.5
Norris, J.R.6
-
33
-
-
2942533032
-
Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein
-
S. Anderson, V. Srajer, R. Pahl, S. Rajagopal, F. Schotte, P. Anfinrud, M. Wulff, and K. Moffat Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein Structure 12 2004 1039 1045
-
(2004)
Structure
, vol.12
, pp. 1039-1045
-
-
Anderson, S.1
Srajer, V.2
Pahl, R.3
Rajagopal, S.4
Schotte, F.5
Anfinrud, P.6
Wulff, M.7
Moffat, K.8
-
34
-
-
1842738214
-
Protein kinetics: Structures of intermediates and reaction mechanism from time-resolved X-ray data
-
M. Schmidt, R. Pahl, V. Srajer, S. Anderson, Z. Ren, H. Ihee, S. Rajagopal, and K. Moffat Protein kinetics: structures of intermediates and reaction mechanism from time-resolved X-ray data Proc Natl Acad Sci USA 101 2004 4799 4804
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 4799-4804
-
-
Schmidt, M.1
Pahl, R.2
Srajer, V.3
Anderson, S.4
Ren, Z.5
Ihee, H.6
Rajagopal, S.7
Moffat, K.8
-
35
-
-
11844294715
-
A structural pathway for signaling in the E46Q mutant of photoactive yellow protein
-
S. Rajagopal, S. Anderson, V. Srajer, M. Schmidt, R. Pahl, and K. Moffat A structural pathway for signaling in the E46Q mutant of photoactive yellow protein Structure 13 2005 55 63 SVD analysis of 54 Laue data sets collected over the past few years provided a convincing structural picture of signaling in the E46Q mutant of PYP. Five distinct structural intermediates were identified and a plausible mechanism for their interconversion is proposed.
-
(2005)
Structure
, vol.13
, pp. 55-63
-
-
Rajagopal, S.1
Anderson, S.2
Srajer, V.3
Schmidt, M.4
Pahl, R.5
Moffat, K.6
-
36
-
-
21044432995
-
Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds
-
•] on wild-type PYP. Amazingly high-quality data are shown, covering the most extended time range described to date.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 7145-7150
-
-
Ihee, H.1
Rajagopal, S.2
Srajer, V.3
Pahl, R.4
Anderson, S.5
Schmidt, M.6
Schotte, F.7
Anfinrud, P.A.8
Wulff, M.9
Moffat, K.10
-
37
-
-
0026320866
-
The energy landscapes and motions of proteins
-
H. Frauenfelder, S.G. Sligar, and P.G. Wolynes The energy landscapes and motions of proteins Science 254 1991 1598 1603
-
(1991)
Science
, vol.254
, pp. 1598-1603
-
-
Frauenfelder, H.1
Sligar, S.G.2
Wolynes, P.G.3
-
38
-
-
16244392086
-
When X-rays modify the protein structure: Radiation damage at work
-
O. Carugo, and K.D. Carugo When X-rays modify the protein structure: radiation damage at work Trends Biochem Sci 30 2005 213 219
-
(2005)
Trends Biochem Sci
, vol.30
, pp. 213-219
-
-
Carugo, O.1
Carugo, K.D.2
-
39
-
-
9944232681
-
Microspectrophotometry for structural enzymology
-
A.R. Pearson, A. Mozzarelli, and G.L. Rossi Microspectrophotometry for structural enzymology Curr Opin Struct Biol 14 2004 656 662 A useful review on microspectrophotometry.
-
(2004)
Curr Opin Struct Biol
, vol.14
, pp. 656-662
-
-
Pearson, A.R.1
Mozzarelli, A.2
Rossi, G.L.3
-
40
-
-
0028898295
-
Optical studies of a bacterial photoreceptor protein, photoactive yellow protein, in single crystals
-
K. Ng, E.D. Getzoff, and K. Moffat Optical studies of a bacterial photoreceptor protein, photoactive yellow protein, in single crystals Biochemistry 34 1995 879 890
-
(1995)
Biochemistry
, vol.34
, pp. 879-890
-
-
Ng, K.1
Getzoff, E.D.2
Moffat, K.3
-
41
-
-
0037064286
-
Bacteriorhodopsin: A high-resolution structural view of vectorial proton transport
-
R. Neutze, E. Pebay-Peyroula, K. Edman, A. Royant, J. Navarro, and E.M. Landau Bacteriorhodopsin: a high-resolution structural view of vectorial proton transport Biochim Biophys Acta 1565 2002 144 167
-
(2002)
Biochim Biophys Acta
, vol.1565
, pp. 144-167
-
-
Neutze, R.1
Pebay-Peyroula, E.2
Edman, K.3
Royant, A.4
Navarro, J.5
Landau, E.M.6
-
42
-
-
0036005612
-
Cryophotolysis of caged compounds: A technique for trapping intermediate states in protein crystals
-
T. Ursby, M. Weik, E. Fioravanti, M. Delarue, M. Goeldner, and D. Bourgeois Cryophotolysis of caged compounds: a technique for trapping intermediate states in protein crystals Acta Crystallogr D Biol Crystallogr 58 2002 607 614
-
(2002)
Acta Crystallogr D Biol Crystallogr
, vol.58
, pp. 607-614
-
-
Ursby, T.1
Weik, M.2
Fioravanti, E.3
Delarue, M.4
Goeldner, M.5
Bourgeois, D.6
-
43
-
-
2142699539
-
Temperature derivative fluorescence spectroscopy as a tool to study dynamical changes in protein crystals
-
M. Weik, X. Vernede, A. Royant, and D. Bourgeois Temperature derivative fluorescence spectroscopy as a tool to study dynamical changes in protein crystals Biophys J 86 2004 3176 3185 The authors proposed that exogenous fluorophores can be used to follow solvent glass transitions or protein dynamical transitions within crystals by fluorescence microspectrophotometry.
-
(2004)
Biophys J
, vol.86
, pp. 3176-3185
-
-
Weik, M.1
Vernede, X.2
Royant, A.3
Bourgeois, D.4
-
44
-
-
3142658015
-
Following ligand binding and ligand reactions in proteins via Raman crystallography
-
P.R. Carey, and J. Dong Following ligand binding and ligand reactions in proteins via Raman crystallography Biochemistry 43 2004 8885 8893
-
(2004)
Biochemistry
, vol.43
, pp. 8885-8893
-
-
Carey, P.R.1
Dong, J.2
-
45
-
-
0037452887
-
Displacement of the tyrosyl radical cofactor in ribonucleotide reductase obtained by single-crystal high-field EPR and 1.4-A x-ray data
-
M. Hogbom, M. Galander, M. Andersson, M. Kolberg, W. Hofbauer, G. Lassmann, P. Nordlund, and F. Lendzian Displacement of the tyrosyl radical cofactor in ribonucleotide reductase obtained by single-crystal high-field EPR and 1.4-A x-ray data Proc Natl Acad Sci USA 100 2003 3209 3214
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 3209-3214
-
-
Hogbom, M.1
Galander, M.2
Andersson, M.3
Kolberg, M.4
Hofbauer, W.5
Lassmann, G.6
Nordlund, P.7
Lendzian, F.8
-
47
-
-
0034808210
-
Specific protein dynamics near the solvent glass transition assayed by radiation-induced structural changes
-
M. Weik, R.B. Ravelli, I. Silman, J.L. Sussman, P. Gros, and J. Kroon Specific protein dynamics near the solvent glass transition assayed by radiation-induced structural changes Protein Sci 10 2001 1953 1961
-
(2001)
Protein Sci
, vol.10
, pp. 1953-1961
-
-
Weik, M.1
Ravelli, R.B.2
Silman, I.3
Sussman, J.L.4
Gros, P.5
Kroon, J.6
-
48
-
-
25844516394
-
New perspectives in kinetic protein crystallography using caged compounds
-
R. Givens Wiley-vch
-
D. Bourgeois, and M. Weik New perspectives in kinetic protein crystallography using caged compounds R. Givens Dynamic Studies in Biology 2005 Wiley-vch 410 434 If you enjoyed reading our review, take a look at this more detailed book chapter!
-
(2005)
Dynamic Studies in Biology
, pp. 410-434
-
-
Bourgeois, D.1
Weik, M.2
-
49
-
-
0035918224
-
Structure of the bound dioxygen species in the cytochrome oxidase reaction of cytochrome cd1 nitrite reductase
-
T. Sjogren, and J. Hajdu Structure of the bound dioxygen species in the cytochrome oxidase reaction of cytochrome cd1 nitrite reductase J Biol Chem 276 2001 13072 13076
-
(2001)
J Biol Chem
, vol.276
, pp. 13072-13076
-
-
Sjogren, T.1
Hajdu, J.2
-
50
-
-
0034088779
-
The catalytic pathway of cytochrome p450cam at atomic resolution
-
I. Schlichting, J. Berendzen, K. Chu, A.M. Stock, S.A. Maves, D.E. Benson, R.M. Sweet, D. Ringe, G.A. Petsko, and S.G. Sligar The catalytic pathway of cytochrome p450cam at atomic resolution Science 287 2000 1615 1622
-
(2000)
Science
, vol.287
, pp. 1615-1622
-
-
Schlichting, I.1
Berendzen, J.2
Chu, K.3
Stock, A.M.4
Maves, S.A.5
Benson, D.E.6
Sweet, R.M.7
Ringe, D.8
Petsko, G.A.9
Sligar, S.G.10
-
51
-
-
16644374726
-
Observation of time-resolved structural changes by linear interpolation of highly redundant X-ray diffraction data
-
J. Wang, and S.E. Ealick Observation of time-resolved structural changes by linear interpolation of highly redundant X-ray diffraction data Acta Crystallogr D Biol Crystallogr 60 2004 1579 1585
-
(2004)
Acta Crystallogr D Biol Crystallogr
, vol.60
, pp. 1579-1585
-
-
Wang, J.1
Ealick, S.E.2
-
52
-
-
0033439362
-
Laue crystallography: Coming of age
-
Z. Ren, D. Bourgeois, J.R. Helliwell, K. Moffat, V. Srajer, and B.L. Stoddard Laue crystallography: coming of age J Synch Rad 6 1999 891 917
-
(1999)
J Synch Rad
, vol.6
, pp. 891-917
-
-
Ren, Z.1
Bourgeois, D.2
Helliwell, J.R.3
Moffat, K.4
Srajer, V.5
Stoddard, B.L.6
-
53
-
-
4344645546
-
Analysis of experimental time-resolved crystallographic data by singular value decomposition
-
S. Rajagopal, M. Schmidt, S. Anderson, H. Ihee, and K. Moffat Analysis of experimental time-resolved crystallographic data by singular value decomposition Acta Crystallogr D Biol Crystallogr 60 2004 860 871
-
(2004)
Acta Crystallogr D Biol Crystallogr
, vol.60
, pp. 860-871
-
-
Rajagopal, S.1
Schmidt, M.2
Anderson, S.3
Ihee, H.4
Moffat, K.5
-
54
-
-
0037342350
-
Application of singular value decomposition to the analysis of time-resolved macromolecular X-ray data
-
M. Schmidt, S. Rajagopal, Z. Ren, and K. Moffat Application of singular value decomposition to the analysis of time-resolved macromolecular X-ray data Biophys J 84 2003 2112 2129
-
(2003)
Biophys J
, vol.84
, pp. 2112-2129
-
-
Schmidt, M.1
Rajagopal, S.2
Ren, Z.3
Moffat, K.4
-
55
-
-
11844255732
-
Resolving protein structure dynamically
-
S. Yeremenko, and K.J. Hellingwerf Resolving protein structure dynamically Structure 13 2005 4 6
-
(2005)
Structure
, vol.13
, pp. 4-6
-
-
Yeremenko, S.1
Hellingwerf, K.J.2
-
56
-
-
1842687872
-
Biomolecular cryocrystallography: Structural changes during flash-cooling
-
B. Halle Biomolecular cryocrystallography: structural changes during flash-cooling Proc Natl Acad Sci USA 101 2004 4793 4798
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 4793-4798
-
-
Halle, B.1
-
57
-
-
0036101649
-
Protein crystallography in a vapour stream: Data collection, reaction initiation and intermediate trapping in naked hydrated protein crystals
-
T. Sjogren, G. Carlsson, G. Larsson, A. Hajdu, C. Andersson, H. Petterssona, and J. Hajdua Protein crystallography in a vapour stream: data collection, reaction initiation and intermediate trapping in naked hydrated protein crystals J Appl Cryst 35 2002 113 116
-
(2002)
J Appl Cryst
, vol.35
, pp. 113-116
-
-
Sjogren, T.1
Carlsson, G.2
Larsson, G.3
Hajdu, A.4
Andersson, C.5
Petterssona, H.6
Hajdua, J.7
-
58
-
-
0033592726
-
High-resolution X-ray structure of an early intermediate in the bacteriorhodopsin photocycle
-
K. Edman, P. Nollert, A. Royant, H. Belrhali, E. Pebay-Peyroula, J. Hajdu, R. Neutze, and E.M. Landau High-resolution X-ray structure of an early intermediate in the bacteriorhodopsin photocycle Nature 401 1999 822 826
-
(1999)
Nature
, vol.401
, pp. 822-826
-
-
Edman, K.1
Nollert, P.2
Royant, A.3
Belrhali, H.4
Pebay-Peyroula, E.5
Hajdu, J.6
Neutze, R.7
Landau, E.M.8
-
59
-
-
0028801485
-
Difference refinement: Obtaining differences between two related structures
-
T.C. Terwilliger, and J. Berendzen Difference refinement: obtaining differences between two related structures Acta Crystallogr D Biol Crystallogr 51 1995 609 618
-
(1995)
Acta Crystallogr D Biol Crystallogr
, vol.51
, pp. 609-618
-
-
Terwilliger, T.C.1
Berendzen, J.2
-
60
-
-
4344649800
-
Potential impact of an X-ray free electron laser on structural biology
-
R. Neutze, G. Huldt, J. Hajdu, and D. van der Spoel Potential impact of an X-ray free electron laser on structural biology Rad Phys Chem 71 2004 905 916
-
(2004)
Rad Phys Chem
, vol.71
, pp. 905-916
-
-
Neutze, R.1
Huldt, G.2
Hajdu, J.3
Van Der Spoel, D.4
|