A resistant molecular dynamics and simulated annealing approach for protein homology modeling utilizing mean angles

BMC Bioinformatics

Volumn 6, Issue , 2005, Pages

  Möglich, Andreas ^a,b   Weinfurtner, Daniel ^a,c   Maurer, Till ^a,d   Gronwald, Wolfram ^a   Kalbitzer, Hans Robert ^a  

^a UNIVERSITY OF REGENSBURG   (Germany)

^b UNIVERSITY OF BASEL   (Switzerland)

^c TECHNICAL UNIVERSITY OF MUNICH   (Germany)

^d BOEHRINGER INGELHEIM PHARMA GMBH AND CO KG   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CONSERVED RESIDUES; HOMOLOGY MODELING; PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR; PROTEIN HOMOLOGY MODELS; STANDARD DEVIATION; STRUCTURE MODELS; THREE-DIMENSIONAL STRUCTURE; X-RAY STRUCTURE;

AMINO ACIDS; ATOMS; CYTOLOGY; ESCHERICHIA COLI; HYDROGEN BONDS; PROTEINS; SIMULATED ANNEALING; X RAYS;

MOLECULAR DYNAMICS;

PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA; PHOSPHATE TRANSPORTER; BACTERIAL PROTEIN; HISTIDINE; PHOSPHOCARRIER PROTEIN HPR; PHOSPHOENOLPYRUVATE SUGAR PHOSPHOTRANSFERASE;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; ATOM; AUTOMATION; CALCULATION; COMPUTER PROGRAM; CONTROLLED STUDY; ESCHERICHIA COLI; GEOMETRY; HUMAN; HYDROGEN BOND; MATHEMATICAL COMPUTING; MOLECULAR MECHANICS; NONHUMAN; PREDICTION; PROTEIN DATABASE; PROTEIN STRUCTURE; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY; SIMULATION; X RAY; BIOLOGY; CHEMICAL MODEL; CHEMICAL STRUCTURE; CHEMISTRY; COMPUTER GRAPHICS; COMPUTER SIMULATION; CONFORMATION; ENTEROCOCCUS FAECALIS; GENETICS; METABOLISM; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PROCEDURES; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN SECONDARY STRUCTURE; SEQUENCE ANALYSIS; STATISTICAL MODEL; THEORETICAL MODEL; X RAY CRYSTALLOGRAPHY;

ALGORITHMS; BACTERIAL PROTEINS; COMPUTATIONAL BIOLOGY; COMPUTER GRAPHICS; COMPUTER SIMULATION; CRYSTALLOGRAPHY, X-RAY; DATABASES, PROTEIN; ENTEROCOCCUS FAECALIS; ESCHERICHIA COLI; HISTIDINE; HUMANS; HYDROGEN BONDING; MAGNETIC RESONANCE SPECTROSCOPY; MODELS, CHEMICAL; MODELS, MOLECULAR; MODELS, STATISTICAL; MODELS, THEORETICAL; MOLECULAR CONFORMATION; PHOSPHOENOLPYRUVATE SUGAR PHOSPHOTRANSFERASE SYSTEM; PPAR GAMMA; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; SEQUENCE ANALYSIS, PROTEIN; SOFTWARE;

EID: 25444446805     PISSN: 14712105     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-6-91     Document Type: Article

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