-
1
-
-
0242573122
-
Aquaporin water channels: Molecular mechanisms for human diseases
-
Agre, P., and D. Kozono. 2003. Aquaporin water channels: molecular mechanisms for human diseases. FEBS Lett. 555:72-78.
-
(2003)
FEBS Lett.
, vol.555
, pp. 72-78
-
-
Agre, P.1
Kozono, D.2
-
2
-
-
0027987062
-
Identification of acetylcholine-receptor channel-lining residues in the entire M2 segment of the α subunit
-
Akabas, M. H., C. Kaufmann, P. Archdeacon, and A. Karlin. 1994. Identification of acetylcholine-receptor channel-lining residues in the entire M2 segment of the α subunit. Neuron. 13:919-927.
-
(1994)
Neuron
, vol.13
, pp. 919-927
-
-
Akabas, M.H.1
Kaufmann, C.2
Archdeacon, P.3
Karlin, A.4
-
3
-
-
0037152843
-
Intermittent permeation of cylindrical nanopores by water
-
Allen, R., S. Melchionna, and J. P. Hansen. 2002. Intermittent permeation of cylindrical nanopores by water. Phys. Rev. Lett. 89:175502.
-
(2002)
Phys. Rev. Lett.
, vol.89
, pp. 175502
-
-
Allen, R.1
Melchionna, S.2
Hansen, J.P.3
-
4
-
-
0003135057
-
Gramicidin channels: Molecular force transducers in lipid bilayers
-
Andersen, O. S., C. Nielsen, A. M. Maer, J. A. Lunds, M. Goulian, and R. E. Koeppe. 1998. Gramicidin channels: molecular force transducers in lipid bilayers. Biol. Skr. Dan. Via. Selsk. 49:75-82.
-
(1998)
Biol. Skr. Dan. Via. Selsk.
, vol.49
, pp. 75-82
-
-
Andersen, O.S.1
Nielsen, C.2
Maer, A.M.3
Lunds, J.A.4
Goulian, M.5
Koeppe, R.E.6
-
5
-
-
0142073070
-
A prokaryotic glutamate receptor: Homology modelling and molecular dynamics simulations of GluR0
-
Arinaminpathy, Y., P. C. Biggin, I. H. Shrivastava, and M. S. P. Sansom. 2003. A prokaryotic glutamate receptor: homology modelling and molecular dynamics simulations of GluR0. FEBS Lett. 553:321-327.
-
(2003)
FEBS Lett.
, vol.553
, pp. 321-327
-
-
Arinaminpathy, Y.1
Biggin, P.C.2
Shrivastava, I.H.3
Sansom, M.S.P.4
-
6
-
-
0035963778
-
Molecular dynamics study of the effect of surfactant on a biomembrane
-
Bandyopadhyay, S., J. Shelley, and M. L. Klein. 2001. Molecular dynamics study of the effect of surfactant on a biomembrane. J. Phys. Chem. B. 105:5979-5986.
-
(2001)
J. Phys. Chem. B
, vol.105
, pp. 5979-5986
-
-
Bandyopadhyay, S.1
Shelley, J.2
Klein, M.L.3
-
7
-
-
0142027322
-
Modulation of nicotinic acetylcholine receptor function through the outer and middle rings of transmembrane domains
-
Barrantes, F. J. 2003. Modulation of nicotinic acetylcholine receptor function through the outer and middle rings of transmembrane domains. Curr. Opin. Drug Disc. 6:620-632.
-
(2003)
Curr. Opin. Drug Disc.
, vol.6
, pp. 620-632
-
-
Barrantes, F.J.1
-
8
-
-
2242431668
-
Crystal structure of Escherichia coli MscS, a voltage-modulated and mechanosensitive channel
-
Bass, R. B., P. Strop, M. T. Barclay, and D. C. Rees. 2002. Crystal structure of Escherichia coli MscS, a voltage-modulated and mechanosensitive channel. Science. 298:1582-1587.
-
(2002)
Science
, vol.298
, pp. 1582-1587
-
-
Bass, R.B.1
Strop, P.2
Barclay, M.T.3
Rees, D.C.4
-
9
-
-
0038472282
-
Liquid-vapor oscillations of water in hydrophobic nanopores
-
Beckstein, O., and M. S. P. Sansom. 2003. Liquid-vapor oscillations of water in hydrophobic nanopores. Proc. Natl. Acad. Sci. USA. 100:7063-7068.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 7063-7068
-
-
Beckstein, O.1
Sansom, M.S.P.2
-
11
-
-
0037159727
-
Force and voltage sensors in one structure
-
Bezanilla, F., and E. Perozo. 2002. Force and voltage sensors in one structure. Science. 298:1562-1363.
-
(2002)
Science
, vol.298
, pp. 1562-11363
-
-
Bezanilla, F.1
Perozo, E.2
-
12
-
-
0002128853
-
Evolution of membranes from a physics perspective
-
Bloom, M. 1998. Evolution of membranes from a physics perspective. Biol. Skr. Dan. Vid. Selsk. 49:13-17.
-
(1998)
Biol. Skr. Dan. Vid. Selsk.
, vol.49
, pp. 13-17
-
-
Bloom, M.1
-
13
-
-
0035996998
-
OmpA: A pore or not a pore? Simulation and modeling studies
-
Bond, P. J., J. D. Faraldo-Gómez, and M. S. P. Sansom. 2002. OmpA: a pore or not a pore? Simulation and modeling studies. Biophys. J. 83:763-775.
-
(2002)
Biophys. J.
, vol.83
, pp. 763-775
-
-
Bond, P.J.1
Faraldo-Gómez, J.D.2
Sansom, M.S.P.3
-
14
-
-
0035902009
-
Crystal structure of an Ach-binding protein reveals the ligand-binding domain of nicotinic receptors
-
Brejc, K., W. J. van Dijk, R. V. Klaassen, M. Schuurmans, J. van der Oost, A. B. Smit, and T. K. Sixma. 2001. Crystal structure of an Ach-binding protein reveals the ligand-binding domain of nicotinic receptors. Nature. 411:269-276.
-
(2001)
Nature
, vol.411
, pp. 269-276
-
-
Brejc, K.1
Van Dijk, W.J.2
Klaassen, R.V.3
Schuurmans, M.4
Van Der Oost, J.5
Smit, A.B.6
Sixma, T.K.7
-
15
-
-
0028124422
-
Modulation of rhodopsin function by properties of the membrane bilayer
-
Brown, M. F. 1994. Modulation of rhodopsin function by properties of the membrane bilayer. Chem. Phys. Lipids. 73:159-180.
-
(1994)
Chem. Phys. Lipids
, vol.73
, pp. 159-180
-
-
Brown, M.F.1
-
16
-
-
0032545321
-
Structure of the MscL homolog from Mycobacterium tuberculosis: A gated mechanosensitive ion channel
-
Chang, G., R. H. Spencer, A. T. Lee, M. T. Barclay, and D. C. Rees. 1998. Structure of the MscL homolog from Mycobacterium tuberculosis: a gated mechanosensitive ion channel. Science. 282:2220-2226.
-
(1998)
Science
, vol.282
, pp. 2220-2226
-
-
Chang, G.1
Spencer, R.H.2
Lee, A.T.3
Barclay, M.T.4
Rees, D.C.5
-
17
-
-
0027443270
-
Chemical signaling in the brain
-
Changeux, J. P. 1993. Chemical signaling in the brain. Scien. Amer. 1:58-62.
-
(1993)
Scien. Amer.
, vol.1
, pp. 58-62
-
-
Changeux, J.P.1
-
18
-
-
0033119869
-
Mutational analysis of the charge selectivity filter of the alpha 7 nicotinic acetylcholine receptor
-
Corringer, P. J., S. Bertrand, J. L. Galzi, A. Devillers-Thiery, J. P. Changeux, and D. Bertrand. 1999. Mutational analysis of the charge selectivity filter of the alpha 7 nicotinic acetylcholine receptor. Neuron. 22:831-843.
-
(1999)
Neuron
, vol.22
, pp. 831-843
-
-
Corringer, P.J.1
Bertrand, S.2
Galzi, J.L.3
Devillers-Thiery, A.4
Changeux, J.P.5
Bertrand, D.6
-
20
-
-
33846823909
-
Particle mesh Ewald: An N.log(N) method for Ewald sums in large systems
-
Darden, T., D. York, and L. Pedersen. 1993. Particle mesh Ewald: an N.log(N) method for Ewald sums in large systems. J. Chem. Phys. 98:10089-10092.
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
21
-
-
0032478818
-
+ conduction and selectivity
-
+ conduction and selectivity. Science. 280:69-77.
-
(1998)
Science
, vol.280
, pp. 69-77
-
-
Doyle, D.A.1
Cabral, J.M.2
Pfuetzner, R.A.3
Kuo, A.L.4
Gulbis, J.M.5
Cohen, S.L.6
Chait, B.T.7
MacKinnon, R.8
-
22
-
-
0037122805
-
X-ray structure of a ClC chloride channel at 3.0 a reveals the molecular basis of anion selectivity
-
Dutzler, R., E. B. Campbell, M. Cadene, B. T. Chait, and R. MacKinnon. 2002. X-ray structure of a ClC chloride channel at 3.0 A reveals the molecular basis of anion selectivity. Nature. 415:287-294.
-
(2002)
Nature
, vol.415
, pp. 287-294
-
-
Dutzler, R.1
Campbell, E.B.2
Cadene, M.3
Chait, B.T.4
MacKinnon, R.5
-
23
-
-
1842682281
-
Electric field-controlled water permeation coupled to ion transport through a nanopore
-
Dzubiella, J., R. Allen, and J. P. Hansen. 2004. Electric field-controlled water permeation coupled to ion transport through a nanopore. J. Chem. Phys. 120:5001-5004.
-
(2004)
J. Chem. Phys.
, vol.120
, pp. 5001-5004
-
-
Dzubiella, J.1
Allen, R.2
Hansen, J.P.3
-
24
-
-
0034250744
-
An improved empirical potential energy function for molecular simulations of phospholipids
-
Feller, S. E., and A. D. MacKerell Jr. 2000. An improved empirical potential energy function for molecular simulations of phospholipids. J. Phys. Chem. B. 104:7510-7515.
-
(2000)
J. Phys. Chem. B
, vol.104
, pp. 7510-7515
-
-
Feller, S.E.1
MacKerell Jr., A.D.2
-
25
-
-
0035900249
-
Arginine-phosphate salt bridges in protein-DNA complexes: A Car-Parrinello study
-
Frigyes, D., F. Alber, S. Pongor, and P. Carloni. 2001. Arginine-phosphate salt bridges in protein-DNA complexes: a Car-Parrinello study. J. Mol. Struct. 574:39-45.
-
(2001)
J. Mol. Struct.
, vol.574
, pp. 39-45
-
-
Frigyes, D.1
Alber, F.2
Pongor, S.3
Carloni, P.4
-
26
-
-
0026656037
-
Mutations in the channel domain of a neuronal nicotinic receptor convert ion selectivity from cationic to anionic
-
Galzi, J. L., A. Devillers-Thiery, N. Hussy, S. Bertrand, J. P. Changeux, and D. Bertrand. 1992. Mutations in the channel domain of a neuronal nicotinic receptor convert ion selectivity from cationic to anionic. Nature. 359:500-505.
-
(1992)
Nature
, vol.359
, pp. 500-505
-
-
Galzi, J.L.1
Devillers-Thiery, A.2
Hussy, N.3
Bertrand, S.4
Changeux, J.P.5
Bertrand, D.6
-
27
-
-
0034677524
-
Mapping the conformational wave of acetylcholine receptor channel gating
-
Grosman, C., M. Zhou, and A. Auerbach. 2000. Mapping the conformational wave of acetylcholine receptor channel gating. Nature. 403:773-776.
-
(2000)
Nature
, vol.403
, pp. 773-776
-
-
Grosman, C.1
Zhou, M.2
Auerbach, A.3
-
28
-
-
2342472669
-
Oily barbarians breach ion channel gates
-
Hilgemann, D. W. 2004. Oily barbarians breach ion channel gates. Science. 304:223-224.
-
(2004)
Science
, vol.304
, pp. 223-224
-
-
Hilgemann, D.W.1
-
30
-
-
0035829539
-
Water conduction through the hydrophobic channel of a carbon nanotube
-
Hummer, G., J. C. Rasaiah, and J. P. Noworyta. 2001. Water conduction through the hydrophobic channel of a carbon nanotube. Nature. 414:188-190.
-
(2001)
Nature
, vol.414
, pp. 188-190
-
-
Hummer, G.1
Rasaiah, J.C.2
Noworyta, J.P.3
-
31
-
-
0029878720
-
VMD - Visual molecular dynamics
-
Humphrey, W., A. Dalke, and K. Schulten. 1996. VMD - visual molecular dynamics. J. Mol. Graph. 14:33-38. http://www.ks.uiuc.edu/Research/vmd/
-
(1996)
J. Mol. Graph.
, vol.14
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
32
-
-
0035979711
-
Neuronal nicotinic receptors: From protein structure to function
-
Jtier, V., and D. Bertrand. 2001. Neuronal nicotinic receptors: from protein structure to function. FEBS Lett. 504:118-125.
-
(2001)
FEBS Lett.
, vol.504
, pp. 118-125
-
-
Jtier, V.1
Bertrand, D.2
-
33
-
-
0037198625
-
The open pore conformation of potassium channels
-
Jiang, Y., A. Lee, J. Chen, M. Cadene, B. T. Chait, and R. MacKinnon. 2002a. The open pore conformation of potassium channels. Nature. 417:523-526.
-
(2002)
Nature
, vol.417
, pp. 523-526
-
-
Jiang, Y.1
Lee, A.2
Chen, J.3
Cadene, M.4
Chait, B.T.5
MacKinnon, R.6
-
34
-
-
0037198626
-
Crystal structure and mechanism of a calcium-gated potassium channel
-
Jiang, Y., A. Lee, J. Chen, M. Cadene, B. T. Chait, and R. MacKinnon. 2002b. Crystal structure and mechanism of a calcium-gated potassium channel. Nature. 417:515-522.
-
(2002)
Nature
, vol.417
, pp. 515-522
-
-
Jiang, Y.1
Lee, A.2
Chen, J.3
Cadene, M.4
Chait, B.T.5
MacKinnon, R.6
-
37
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen, W. L., J. Chandrasekhar, J. D. Madura, R. W. Impey, and M. L. Klein. 1983. Comparison of simple potential functions for simulating liquid water. J. Chem. Phys. 79:926-935.
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
38
-
-
0036480194
-
Emerging structure of the nicotinic acetylcholine receptors
-
Karlin, A. 2002. Emerging structure of the nicotinic acetylcholine receptors. Nat. Rev. Neurosci. 3:102-114.
-
(2002)
Nat. Rev. Neurosci.
, vol.3
, pp. 102-114
-
-
Karlin, A.1
-
39
-
-
0029593370
-
Toward a structural basis for the function of the nicotinic acetylcholine receptors and their cousins
-
Karlin, A., and A. Akabas. 1995. Toward a structural basis for the function of the nicotinic acetylcholine receptors and their cousins. Neuron. 15:1231-1244.
-
(1995)
Neuron
, vol.15
, pp. 1231-1244
-
-
Karlin, A.1
Akabas, A.2
-
40
-
-
0041806486
-
A cytoplasmic region determines single-channel conductance in 5-HT3 receptors
-
Kelley, S. P., J. I. Dunlop, E. F. Kirkness, J. J. Lambert, and J. A. Peters. 2003. A cytoplasmic region determines single-channel conductance in 5-HT3 receptors. Nature. 424:321-324.
-
(2003)
Nature
, vol.424
, pp. 321-324
-
-
Kelley, S.P.1
Dunlop, J.I.2
Kirkness, E.F.3
Lambert, J.J.4
Peters, J.A.5
-
41
-
-
0242405501
-
Synthetic peptides as models for intrinsic membrane proteins
-
Killian, J. A. 2003. Synthetic peptides as models for intrinsic membrane proteins. FEBS Lett. 555:134-138.
-
(2003)
FEBS Lett.
, vol.555
, pp. 134-138
-
-
Killian, J.A.1
-
42
-
-
12444274301
-
Crystal structure of the potassium channel KirBac1.1 in the closed state
-
Kuo, A., J. M. Gulbis, J. F. Antcliff, T. Rahman, E. D. Lowe, J. Zimmer, J. Cuthbertson, F. M. Ashcroft, T. Ezaki, and D. A. Doyle. 2003. Crystal structure of the potassium channel KirBac1.1 in the closed state. Science. 300:1922-1926.
-
(2003)
Science
, vol.300
, pp. 1922-1926
-
-
Kuo, A.1
Gulbis, J.M.2
Antcliff, J.F.3
Rahman, T.4
Lowe, E.D.5
Zimmer, J.6
Cuthbertson, J.7
Ashcroft, F.M.8
Ezaki, T.9
Doyle, D.A.10
-
43
-
-
0033996292
-
Structure and dynamics of the pore-lining helix of the nicotinic acetylcholine receptor: MD simulations in water, lipid bilayers, and transbilayer bundles
-
Law, R. J., L. R. Forrest, K. M. Ranatunga, P. La Rocca, D. P. Tieleman, and M. S. P. Sansom. 2000. Structure and dynamics of the pore-lining helix of the nicotinic acetylcholine receptor: MD simulations in water, lipid bilayers, and transbilayer bundles. Proteins. 39:47-55.
-
(2000)
Proteins
, vol.39
, pp. 47-55
-
-
Law, R.J.1
Forrest, L.R.2
Ranatunga, K.M.3
La Rocca, P.4
Tieleman, D.P.5
Sansom, M.S.P.6
-
44
-
-
12244294449
-
Pores formed by the nicotinic receptor M2δ peptide: A molecular dynamics simulations study
-
Law, R. J., D. P. Tieleman, and M. S. P. Sansom. 2003. Pores formed by the nicotinic receptor M2δ peptide: a molecular dynamics simulations study. Biophys. J. 84:14-27.
-
(2003)
Biophys. J.
, vol.84
, pp. 14-27
-
-
Law, R.J.1
Tieleman, D.P.2
Sansom, M.S.P.3
-
45
-
-
0023907575
-
Synthetic amphiphilic peptide models for protein ion channels
-
Lear, J. D., Z. R. Wasserman, and W. F. DeGrado. 1988. Synthetic amphiphilic peptide models for protein ion channels. Science. 240:1177-1181.
-
(1988)
Science
, vol.240
, pp. 1177-1181
-
-
Lear, J.D.1
Wasserman, Z.R.2
Degrado, W.F.3
-
46
-
-
0034986892
-
Structure of ligand-gated ion channels: Critical assessment of biochemical data supports novel topology
-
Leite, J. F., and M. Cascio. 2001. Structure of ligand-gated ion channels: critical assessment of biochemical data supports novel topology. Mol. Cell. Neurosci. 17:777-792.
-
(2001)
Mol. Cell. Neurosci.
, vol.17
, pp. 777-792
-
-
Leite, J.F.1
Cascio, M.2
-
47
-
-
0041784950
-
All-atom empirical potential for molecular modeling and dynamics studies of proteins
-
MacKerell, A. D. Jr., D. Bashford, M. Bellott, R. L. Dunbrack Jr., J. Evanseck, M. J. Field, S. Fischer, J. Gao, H. Guo, S. Ha, D. Joseph, L. Kuchnir, and others. 1998. All-atom empirical potential for molecular modeling and dynamics studies of proteins. J. Phys. Chem. B. 102:3586-3616.
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 3586-3616
-
-
MacKerell Jr., A.D.1
Bashford, D.2
Bellott, M.3
Dunbrack Jr., R.L.4
Evanseck, J.5
Field, M.J.6
Fischer, S.7
Gao, J.8
Guo, H.9
Ha, S.10
Joseph, D.11
Kuchnir, L.12
-
48
-
-
0242657337
-
Potassium channels
-
MacKinnon, R. 2003. Potassium channels. FEBS Lett. 555:62-65.
-
(2003)
FEBS Lett.
, vol.555
, pp. 62-65
-
-
MacKinnon, R.1
-
49
-
-
0038112088
-
Structure and gating mechanism of the acetylcholine receptor pore
-
Miyazawa, A., Y. Fujiyoshi, and N. Unwin. 2003. Structure and gating mechanism of the acetylcholine receptor pore. Nature. 423:949-955.
-
(2003)
Nature
, vol.423
, pp. 949-955
-
-
Miyazawa, A.1
Fujiyoshi, Y.2
Unwin, N.3
-
50
-
-
0029150299
-
Design of molecular function: Channels of communication
-
Montal, M. 1995. Design of molecular function: channels of communication. Annu. Rev. Biophys. Biomol. Struct. 24:31-57.
-
(1995)
Annu. Rev. Biophys. Biomol. Struct.
, vol.24
, pp. 31-57
-
-
Montal, M.1
-
51
-
-
0037064250
-
The structure of the M2 channel-lining segment from the nicotinic acetylcholine receptor
-
Montal, M., and S. J. Opella. 2002. The structure of the M2 channel-lining segment from the nicotinic acetylcholine receptor. Biochim. Biophys. Acta. 1555:287-293.
-
(2002)
Biochim. Biophys. Acta
, vol.1555
, pp. 287-293
-
-
Montal, M.1
Opella, S.J.2
-
52
-
-
0027403316
-
Design, synthesis and functional characterization of a pentameric channel protein that mimics the presumed pore structure of the nicotinic cholinergic receptor
-
Oblatt-Montal, M., T. Iwamoto, J. M. Tomich, and M. Montal. 1993. Design, synthesis and functional characterization of a pentameric channel protein that mimics the presumed pore structure of the nicotinic cholinergic receptor. FEBS Lett. 320:261-266.
-
(1993)
FEBS Lett.
, vol.320
, pp. 261-266
-
-
Oblatt-Montal, M.1
Iwamoto, T.2
Tomich, J.M.3
Montal, M.4
-
53
-
-
0010528163
-
M2-δ, a candidate for the structure lining the ionic channel of the nicotinic cholinergic receptor
-
Oiki, S., W. Danho, V. Madison, and M. Montal. 1988. M2-δ, a candidate for the structure lining the ionic channel of the nicotinic cholinergic receptor. Proc. Natl. Acad. Sci. USA. 85:8703-8707.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 8703-8707
-
-
Oiki, S.1
Danho, W.2
Madison, V.3
Montal, M.4
-
54
-
-
0032919444
-
Structures of the M2 channel-lining segments from nicotinic acetylcholine and NMDA receptors by NMR spectroscopy
-
Opella, S. J., F. M. Marassi, J. J. Gesell, A. P. Valente, Y. Kim, M. Oblatt-Montal, and M. Montal. 1999. Structures of the M2 channel-lining segments from nicotinic acetylcholine and NMDA receptors by NMR spectroscopy. Nat. Struct. Biol. 6:374-379.
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 374-379
-
-
Opella, S.J.1
Marassi, F.M.2
Gesell, J.J.3
Valente, A.P.4
Kim, Y.5
Oblatt-Montal, M.6
Montal, M.7
-
55
-
-
0037678992
-
Molecular dynamics simulation of a dipalmitoylphosphatidylcholine bilayer with NaCl
-
Pandit, S. A., D. Bostick, and M. L. Berkowitz. 2003. Molecular dynamics simulation of a dipalmitoylphosphatidylcholine bilayer with NaCl. Biophys. J. 84:3743-3750.
-
(2003)
Biophys. J.
, vol.84
, pp. 3743-3750
-
-
Pandit, S.A.1
Bostick, D.2
Berkowitz, M.L.3
-
56
-
-
0032811126
-
Spatial structure of the M2 transmembrane segment of the nicotinic acetylcholine receptor α-subunit
-
Pashkov, V. S., I. V. Maslennikove, L. D. Tchikin, R. G. Efremov, V. T. Ivanov, and A. S. Arseniev. 1999. Spatial structure of the M2 transmembrane segment of the nicotinic acetylcholine receptor α-subunit. FEBS Lett. 457:117-121.
-
(1999)
FEBS Lett.
, vol.457
, pp. 117-121
-
-
Pashkov, V.S.1
Maslennikove, I.V.2
Tchikin, L.D.3
Efremov, R.G.4
Ivanov, V.T.5
Arseniev, A.S.6
-
57
-
-
0036286853
-
Lipid bilayers, NMR relaxation, and computer simulations
-
Pastor, R. W., R. M. Venable, and S. E. Feller. 2002. Lipid bilayers, NMR relaxation, and computer simulations. Acc. Chem. Res. 35:438-446.
-
(2002)
Acc. Chem. Res.
, vol.35
, pp. 438-446
-
-
Pastor, R.W.1
Venable, R.M.2
Feller, S.E.3
-
58
-
-
0038440700
-
Molecular dynamics simulations of lipid bilayers: Major artifacts due to truncating electrostatic interactions
-
Patra, M., M. Karttunen, M. Hyvonen, E. Falck, P. Lindqvist, and I. Vattulainen. 2003. Molecular dynamics simulations of lipid bilayers: major artifacts due to truncating electrostatic interactions. Biophys. J. 84:3636-3645.
-
(2003)
Biophys. J.
, vol.84
, pp. 3636-3645
-
-
Patra, M.1
Karttunen, M.2
Hyvonen, M.3
Falck, E.4
Lindqvist, P.5
Vattulainen, I.6
-
59
-
-
0036280795
-
Computational studies of the gramicidin channel
-
Roux, B. 2002. Computational studies of the gramicidin channel. Acc. Chem. Res. 35:366-375.
-
(2002)
Acc. Chem. Res.
, vol.35
, pp. 366-375
-
-
Roux, B.1
-
60
-
-
0036555117
-
Towards an understanding of complex biological membranes from atomistic molecular dynamics simulations
-
Saiz, L., S. Bandyopadhyay, and M. L. Klein. 2002. Towards an understanding of complex biological membranes from atomistic molecular dynamics simulations. Bioscience Rep. 22:151-173.
-
(2002)
Bioscience Rep.
, vol.22
, pp. 151-173
-
-
Saiz, L.1
Bandyopadhyay, S.2
Klein, M.L.3
-
61
-
-
1542365497
-
Effect of the pore region of a transmembrane ion-channel on the physical properties of a simple membrane
-
Saiz, L., S. Bandyopadhyay, and M. L. Klein. 2004. Effect of the pore region of a transmembrane ion-channel on the physical properties of a simple membrane. J. Phys. Chem. B. 108:2608-2613.
-
(2004)
J. Phys. Chem. B
, vol.108
, pp. 2608-2613
-
-
Saiz, L.1
Bandyopadhyay, S.2
Klein, M.L.3
-
62
-
-
0036286655
-
Computer simulation studies of model biological membranes
-
Saiz, L., and M. L. Klein. 2002. Computer simulation studies of model biological membranes. Acc. Chem. Res. 35:482-489.
-
(2002)
Acc. Chem. Res.
, vol.35
, pp. 482-489
-
-
Saiz, L.1
Klein, M.L.2
-
63
-
-
0034327611
-
Hinges, swivels and switches: The role of prolines in signalling via transmembrane alpha-helices
-
Sansom, M. S. P., and H. Weinstein. 2000. Hinges, swivels and switches: the role of prolines in signalling via transmembrane alpha-helices. Trends Pharmacol. Sci. 21:445-451.
-
(2000)
Trends Pharmacol. Sci.
, vol.21
, pp. 445-451
-
-
Sansom, M.S.P.1
Weinstein, H.2
-
64
-
-
0002062192
-
An empirical potential energy function for phospholipids: Criteria for parameter optimization and applications
-
K. M. Merz and B. Roux, editors. Birkhauser, Boston
-
Schlenkrich, M., J. Brickmann, A. D. MacKerell Jr., and M. Karplus. 1996. An empirical potential energy function for phospholipids: criteria for parameter optimization and applications. In Biological Membranes: A Molecular Perspective from Computation and Experiment. K. M. Merz and B. Roux, editors. Birkhauser, Boston. 31-82.
-
(1996)
Biological Membranes: A Molecular Perspective from Computation and Experiment
, pp. 31-82
-
-
Schlenkrich, M.1
Brickmann, J.2
MacKerell Jr., A.D.3
Karplus, M.4
-
66
-
-
0037134267
-
Control of the selectivity of the aquaporin water channel family by global orientational tuning
-
Tajkhorshid, E., P. Nollert, M. O. Jensen, L. J. W. Miercke, J. O'Connell, R. M. Stroud, and K. Schulten. 2002. Control of the selectivity of the aquaporin water channel family by global orientational tuning. Science. 296:525-530.
-
(2002)
Science
, vol.296
, pp. 525-530
-
-
Tajkhorshid, E.1
Nollert, P.2
Jensen, M.O.3
Miercke, L.J.W.4
O'Connell, J.5
Stroud, R.M.6
Schulten, K.7
-
67
-
-
0035312897
-
Electrostatics calculations: Recent methodological advances and applications to membranes
-
Tobias, D. J. 2001. Electrostatics calculations: recent methodological advances and applications to membranes. Curr. Op. Struct. Bio. 11:253-261.
-
(2001)
Curr. Op. Struct. Bio.
, vol.11
, pp. 253-261
-
-
Tobias, D.J.1
-
68
-
-
0024290709
-
Ion channel of acetylcholine receptor reconstructed from images of postsynaptic membranes
-
Toyoshima, C., and N. Unwin. 1988. Ion channel of acetylcholine receptor reconstructed from images of postsynaptic membranes. Nature. 336:247-250.
-
(1988)
Nature
, vol.336
, pp. 247-250
-
-
Toyoshima, C.1
Unwin, N.2
-
69
-
-
33646650705
-
Reversible multiple time scale molecular dynamics
-
Tuckerman, M. E., B. J. Berne, and G. J. Martyna. 1992. Reversible multiple time scale molecular dynamics. J. Chem. Phys. 97:1990-2001.
-
(1992)
J. Chem. Phys.
, vol.97
, pp. 1990-2001
-
-
Tuckerman, M.E.1
Berne, B.J.2
Martyna, G.J.3
-
70
-
-
0034625286
-
Exploiting multiple levels of parallelism in molecular dynamics based calculations via modern techniques and software paradigms on distributed memory computers
-
Tuckerman, M. E., D. A. Yarne, S. O. Samuelson, A. L. Hughes, and G. J. Martyna. 2000. Exploiting multiple levels of parallelism in molecular dynamics based calculations via modern techniques and software paradigms on distributed memory computers. Comput. Phys. Commun. 128:333-376.
-
(2000)
Comput. Phys. Commun.
, vol.128
, pp. 333-376
-
-
Tuckerman, M.E.1
Yarne, D.A.2
Samuelson, S.O.3
Hughes, A.L.4
Martyna, G.J.5
-
71
-
-
0027506299
-
Nicotinic acetylcholine receptor at 9 Å resolution
-
Unwin, N. 1993. Nicotinic acetylcholine receptor at 9 Å resolution. J. Mol. Biol. 229:1101-1124.
-
(1993)
J. Mol. Biol.
, vol.229
, pp. 1101-1124
-
-
Unwin, N.1
-
72
-
-
0028921479
-
Acetylcholine receptor channel imaged in the open state
-
Unwin, N. 1995. Acetylcholine receptor channel imaged in the open state. Nature. 373:37-43.
-
(1995)
Nature
, vol.373
, pp. 37-43
-
-
Unwin, N.1
-
73
-
-
0242488935
-
Structure and action of the nicotinic acetylcholine receptor explored by electron microscopy
-
Unwin, N. 2003. Structure and action of the nicotinic acetylcholine receptor explored by electron microscopy. FEBS Lett. 555:91-95.
-
(2003)
FEBS Lett.
, vol.555
, pp. 91-95
-
-
Unwin, N.1
-
75
-
-
0026729232
-
Structure of a fluid dioleoylphosphatidylcholine bilayer determined by joint refinement of x-ray and neutron diffraction data. III. Complete structure
-
White, S. H., and M. C. Wiener. 1992. Structure of a fluid dioleoylphosphatidylcholine bilayer determined by joint refinement of x-ray and neutron diffraction data. III. Complete structure. Biophys. J. 61:434-447.
-
(1992)
Biophys. J.
, vol.61
, pp. 434-447
-
-
White, S.H.1
Wiener, M.C.2
-
76
-
-
0031961956
-
Molecular dynamics simulation of a synthetic ion channel
-
Zhong, Q. F., Q. Jiang, P. B. Moore, D. M. Newns, and M. L. Klein. 1998. Molecular dynamics simulation of a synthetic ion channel. Biophys. J. 74:3-10.
-
(1998)
Biophys. J.
, vol.74
, pp. 3-10
-
-
Zhong, Q.F.1
Jiang, Q.2
Moore, P.B.3
Newns, D.M.4
Klein, M.L.5
-
77
-
-
0034640212
-
Two possible conducting states of the influenza a virus M2 ion-channel
-
Zhong, Q. F., D. M. Newns, P. Pattnaik, J. D. Lear, and M. L. Klein. 2000. Two possible conducting states of the influenza A virus M2 ion-channel. FEBS Lett. 473:195-198.
-
(2000)
FEBS Lett.
, vol.473
, pp. 195-198
-
-
Zhong, Q.F.1
Newns, D.M.2
Pattnaik, P.3
Lear, J.D.4
Klein, M.L.5
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