메뉴 건너뛰기




Volumn 13, Issue 6, 2004, Pages 817-828

Xenopus U8 snoRNA binding protein is a conserved nuclear decapping enzyme

Author keywords

[No Author keywords available]

Indexed keywords

BINDING PROTEIN; RECOMBINANT PROTEIN; SMALL NUCLEOLAR RNA; XENOPUS PROTEIN;

EID: 1842578583     PISSN: 10972765     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1097-2765(04)00127-3     Document Type: Article
Times cited : (57)

References (47)
  • 2
    • 0033968429 scopus 로고    scopus 로고
    • Syndesmos, a protein that interacts with the cytoplasmic domain of syndecan-4, mediates cell spreading and actin cytoskeletal organization
    • Baciu P.C., Saoncella S., Lee S.H., Denhez F., Leuthardt D., Goetinck P.F. Syndesmos, a protein that interacts with the cytoplasmic domain of syndecan-4, mediates cell spreading and actin cytoskeletal organization. J. Cell Sci. 113:2000;315-324.
    • (2000) J. Cell Sci. , vol.113 , pp. 315-324
    • Baciu, P.C.1    Saoncella, S.2    Lee, S.H.3    Denhez, F.4    Leuthardt, D.5    Goetinck, P.F.6
  • 4
    • 0029835350 scopus 로고    scopus 로고
    • The MutT proteins or "nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes
    • Bessman M.J., Frick D.N., O'Handley S.F. The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes. J. Biol. Chem. 271:1996;25059-25062.
    • (1996) J. Biol. Chem. , vol.271 , pp. 25059-25062
    • Bessman, M.J.1    Frick, D.N.2    O'Handley, S.F.3
  • 5
    • 0025738381 scopus 로고
    • Characterization of the mutT nucleoside triphosphatase of Escherichia coli
    • Bhatnagar S.K., Bullions L.C., Bessman M.J. Characterization of the mutT nucleoside triphosphatase of Escherichia coli. J. Biol. Chem. 266:1991;9050-9054.
    • (1991) J. Biol. Chem. , vol.266 , pp. 9050-9054
    • Bhatnagar, S.K.1    Bullions, L.C.2    Bessman, M.J.3
  • 6
    • 0034599976 scopus 로고    scopus 로고
    • A Sm-like protein complex that participates in mRNA degradation
    • Bouveret E., Rigaut G., Shevchenko A., Wilm M., Seraphin B. A Sm-like protein complex that participates in mRNA degradation. EMBO J. 19:2000;1661-1671.
    • (2000) EMBO J. , vol.19 , pp. 1661-1671
    • Bouveret, E.1    Rigaut, G.2    Shevchenko, A.3    Wilm, M.4    Seraphin, B.5
  • 7
    • 0033605754 scopus 로고    scopus 로고
    • The Saccharomyces cerevisiae YOR163w gene encodes a diadenosine 5′,5" ′-P1, P6-hexaphosphate (Ap6A) hydrolase member of the MutT motif (Nudix hydrolase) family
    • Cartwright J.L., McLennan A.G. The Saccharomyces cerevisiae YOR163w gene encodes a diadenosine 5′,5" ′-P1, P6-hexaphosphate (Ap6A) hydrolase member of the MutT motif (Nudix hydrolase) family. J. Biol. Chem. 274:1999;8604-8610.
    • (1999) J. Biol. Chem. , vol.274 , pp. 8604-8610
    • Cartwright, J.L.1    McLennan, A.G.2
  • 8
    • 0035674477 scopus 로고    scopus 로고
    • The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes
    • Coller J.M., Tucker M., Sheth U., Valencia-Sanchez M.A., Parker R. The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes. RNA. 7:2001;1717-1727.
    • (2001) RNA , vol.7 , pp. 1717-1727
    • Coller, J.M.1    Tucker, M.2    Sheth, U.3    Valencia-Sanchez, M.A.4    Parker, R.5
  • 9
    • 0037023787 scopus 로고    scopus 로고
    • Syndesmos, a syndecan-4 cytoplasmic domain interactor, binds to the focal adhesion adaptor proteins paxillin and Hic-5
    • Denhez F., Wilcox-Adelman S.A., Baciu P.C., Saoncella S., Lee S., French B., Neveu W., Goetinck P.F. Syndesmos, a syndecan-4 cytoplasmic domain interactor, binds to the focal adhesion adaptor proteins paxillin and Hic-5. J. Biol. Chem. 277:2002;12270-12274.
    • (2002) J. Biol. Chem. , vol.277 , pp. 12270-12274
    • Denhez, F.1    Wilcox-Adelman, S.A.2    Baciu, P.C.3    Saoncella, S.4    Lee, S.5    French, B.6    Neveu, W.7    Goetinck, P.F.8
  • 10
    • 0033214061 scopus 로고    scopus 로고
    • The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif
    • Dunckley T., Parker R. The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif. EMBO J. 18:1999;5411-5422.
    • (1999) EMBO J. , vol.18 , pp. 5411-5422
    • Dunckley, T.1    Parker, R.2
  • 11
    • 0037013898 scopus 로고    scopus 로고
    • The DEAD box protein Dhh1 stimulates the decapping enzyme Dcp1
    • Fischer N., Weis K. The DEAD box protein Dhh1 stimulates the decapping enzyme Dcp1. EMBO J. 21:2002;2788-2797.
    • (2002) EMBO J. , vol.21 , pp. 2788-2797
    • Fischer, N.1    Weis, K.2
  • 12
    • 0035026968 scopus 로고    scopus 로고
    • The structure of ADP-ribose pyrophosphatase reveals the structural basis for the versatility of the Nudix family
    • Gabelli S.B., Bianchet M.A., Bessman M.J., Amzel L.M. The structure of ADP-ribose pyrophosphatase reveals the structural basis for the versatility of the Nudix family. Nat. Struct. Biol. 8:2001;467-472.
    • (2001) Nat. Struct. Biol. , vol.8 , pp. 467-472
    • Gabelli, S.B.1    Bianchet, M.A.2    Bessman, M.J.3    Amzel, L.M.4
  • 13
    • 0028928307 scopus 로고
    • Is the sphere organelle/coiled body a universal nuclear component?
    • Gall J.G., Tsvetkov A., Wu Z., Murphy C. Is the sphere organelle/coiled body a universal nuclear component? Dev. Genetics. 16:1995;25-35.
    • (1995) Dev. Genetics , vol.16 , pp. 25-35
    • Gall, J.G.1    Tsvetkov, A.2    Wu, Z.3    Murphy, C.4
  • 14
    • 0033596871 scopus 로고    scopus 로고
    • Schizosaccharomyces pombe Aps1, a diadenosine 5′,5" ′-P1, P6-hexaphosphate hydrolase that is a member of the nudix (MutT) family of hydrolases: Cloning of the gene and characterization of the purified enzyme
    • Ingram S.W., Stratemann S.A., Barnes L.D. Schizosaccharomyces pombe Aps1, a diadenosine 5′,5" ′-P1, P6-hexaphosphate hydrolase that is a member of the nudix (MutT) family of hydrolases. cloning of the gene and characterization of the purified enzyme Biochemistry. 38:1999;3649-3655.
    • (1999) Biochemistry , vol.38 , pp. 3649-3655
    • Ingram, S.W.1    Stratemann, S.A.2    Barnes, L.D.3
  • 15
    • 0037133942 scopus 로고    scopus 로고
    • Small nucleolar RNAs: An abundant group of noncoding RNAs with diverse cellular functions
    • Kiss T. Small nucleolar RNAs. an abundant group of noncoding RNAs with diverse cellular functions Cell. 109:2002;145-148.
    • (2002) Cell , vol.109 , pp. 145-148
    • Kiss, T.1
  • 16
    • 0027651654 scopus 로고
    • Localisation of splicing snRNPs in mammalian cells
    • Lamond A.I., Carmo-Fonseca M. Localisation of splicing snRNPs in mammalian cells. Mol. Biol. Rep. 18:1993;127-133.
    • (1993) Mol. Biol. Rep. , vol.18 , pp. 127-133
    • Lamond, A.I.1    Carmo-Fonseca, M.2
  • 17
    • 0029894147 scopus 로고    scopus 로고
    • The role of Glu 57 in the mechanism of the Escherichia coli MutT enzyme by mutagenesis and heteronuclear NMR
    • Lin J., Abeygunawardana C., Frick D.N., Bessman M.J., Mildvan A.S. The role of Glu 57 in the mechanism of the Escherichia coli MutT enzyme by mutagenesis and heteronuclear NMR. Biochemistry. 35:1996;6715-6726.
    • (1996) Biochemistry , vol.35 , pp. 6715-6726
    • Lin, J.1    Abeygunawardana, C.2    Frick, D.N.3    Bessman, M.J.4    Mildvan, A.S.5
  • 18
    • 0031804377 scopus 로고    scopus 로고
    • Of coiled bodies, gems, and salmon
    • Matera A.G. Of coiled bodies, gems, and salmon. J. Cell. Biochem. 70:1998;181-192.
    • (1998) J. Cell. Biochem. , vol.70 , pp. 181-192
    • Matera, A.G.1
  • 19
    • 0028580488 scopus 로고
    • Organization of small nucleolar ribonucleoproteins (snoRNPs) by fluorescence in situ hybridization and immunocytochemistry
    • Matera A.G., Tycowski K.T., Steitz J.A., Ward D.C. Organization of small nucleolar ribonucleoproteins (snoRNPs) by fluorescence in situ hybridization and immunocytochemistry. Mol. Biol. Cell. 5:1994;1289-1299.
    • (1994) Mol. Biol. Cell , vol.5 , pp. 1289-1299
    • Matera, A.G.1    Tycowski, K.T.2    Steitz, J.A.3    Ward, D.C.4
  • 21
    • 0033517098 scopus 로고    scopus 로고
    • Characterization of Sm-like proteins in yeast and their association with U6 snRNA
    • Mayes A.E., Verdone L., Legrain P., Beggs J.D. Characterization of Sm-like proteins in yeast and their association with U6 snRNA. EMBO J. 18:1999;4321-4331.
    • (1999) EMBO J. , vol.18 , pp. 4321-4331
    • Mayes, A.E.1    Verdone, L.2    Legrain, P.3    Beggs, J.D.4
  • 23
    • 0026680843 scopus 로고
    • Site-specific modification of pre-mRNA: The 2′-hydroxyl groups at the splice sites
    • Moore M.J., Sharp P.A. Site-specific modification of pre-mRNA. the 2′-hydroxyl groups at the splice sites Science. 256:1992;992-997.
    • (1992) Science , vol.256 , pp. 992-997
    • Moore, M.J.1    Sharp, P.A.2
  • 24
    • 0033229873 scopus 로고    scopus 로고
    • Functional interaction of a novel 15.5kD [U4/U6.U5] tri-snRNP protein with the 5′ stem-loop of U4 snRNA
    • Nottrott S., Hartmuth K., Fabrizio P., Urlaub H., Vidovic I., Ficner R., Luhrmann R. Functional interaction of a novel 15.5kD [U4/U6.U5] tri-snRNP protein with the 5′ stem-loop of U4 snRNA. EMBO J. 18:1999;6119-6133.
    • (1999) EMBO J. , vol.18 , pp. 6119-6133
    • Nottrott, S.1    Hartmuth, K.2    Fabrizio, P.3    Urlaub, H.4    Vidovic, I.5    Ficner, R.6    Luhrmann, R.7
  • 25
    • 0022196373 scopus 로고
    • Fibrillarin: A new protein of the nucleolus identified by autoimmune sera
    • Ochs R.L., Lischwe M.A., Spohn W.H., Busch H. Fibrillarin. a new protein of the nucleolus identified by autoimmune sera Biol. Cell. 54:1985;123-133.
    • (1985) Biol. Cell. , vol.54 , pp. 123-133
    • Ochs, R.L.1    Lischwe, M.A.2    Spohn, W.H.3    Busch, H.4
  • 26
    • 0031213705 scopus 로고    scopus 로고
    • RNA processing: Pocket guides to ribosomal RNA
    • a
    • Peculis B. RNA processing. pocket guides to ribosomal RNA Curr. Biol. 7:1997;R480-R482. a.
    • (1997) Curr. Biol. , vol.7 , pp. 480-R482
    • Peculis, B.1
  • 27
    • 0030978798 scopus 로고    scopus 로고
    • The sequence of the 5′ end of the U8 small nucleolar RNA is critical for 5.8S and 28S rRNA maturation
    • b
    • Peculis B.A. The sequence of the 5′ end of the U8 small nucleolar RNA is critical for 5.8S and 28S rRNA maturation. Mol. Cell. Biol. 17:1997;3702-3713. b.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 3702-3713
    • Peculis, B.A.1
  • 28
    • 0030294862 scopus 로고    scopus 로고
    • Ribosomal RNA: Small nucleolar RNAs make their mark
    • Peculis B.A., Mount S.M. Ribosomal RNA. small nucleolar RNAs make their mark Curr. Biol. 6:1996;1413-1415.
    • (1996) Curr. Biol. , vol.6 , pp. 1413-1415
    • Peculis, B.A.1    Mount, S.M.2
  • 29
    • 0027213118 scopus 로고
    • Disruption of U8 nucleolar snRNA inhibits 5.8S and 28S rRNA processing in the Xenopus oocyte
    • Peculis B.A., Steitz J.A. Disruption of U8 nucleolar snRNA inhibits 5.8S and 28S rRNA processing in the Xenopus oocyte. Cell. 73:1993;1233-1245.
    • (1993) Cell , vol.73 , pp. 1233-1245
    • Peculis, B.A.1    Steitz, J.A.2
  • 30
    • 0027969318 scopus 로고
    • Sequence and structural elements critical for U8 snRNP function in Xenopus oocytes are evolutionarily conserved
    • Peculis B.A., Steitz J.A. Sequence and structural elements critical for U8 snRNP function in Xenopus oocytes are evolutionarily conserved. Genes Dev. 8:1994;2241-2255.
    • (1994) Genes Dev. , vol.8 , pp. 2241-2255
    • Peculis, B.A.1    Steitz, J.A.2
  • 31
    • 0035934218 scopus 로고    scopus 로고
    • The U8 snoRNA gene family: Identification and characterization of distinct, functional U8 genes in Xenopus
    • Peculis B.A., DeGregorio S., McDowell K. The U8 snoRNA gene family. identification and characterization of distinct, functional U8 genes in Xenopus Gene. 274:2001;83-92.
    • (2001) Gene , vol.274 , pp. 83-92
    • Peculis, B.A.1    Degregorio, S.2    McDowell, K.3
  • 32
    • 0022206234 scopus 로고
    • Primary and secondary structure of U8 small nuclear RNA
    • Reddy R., Henning D., Busch H. Primary and secondary structure of U8 small nuclear RNA. J. Biol. Chem. 260:1985;10930-10935.
    • (1985) J. Biol. Chem. , vol.260 , pp. 10930-10935
    • Reddy, R.1    Henning, D.2    Busch, H.3
  • 33
    • 0033562339 scopus 로고    scopus 로고
    • A Saccharomyces cerevisiae RNA 5′-triphosphatase related to mRNA capping enzyme
    • Rodriguez C.R., Takagi T., Cho E.J., Buratowski S. A Saccharomyces cerevisiae RNA 5′-triphosphatase related to mRNA capping enzyme. Nucleic Acids Res. 27:1999;2181-2188.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 2181-2188
    • Rodriguez, C.R.1    Takagi, T.2    Cho, E.J.3    Buratowski, S.4
  • 34
    • 0032538976 scopus 로고    scopus 로고
    • A novel context for the 'MutT' module, a guardian of cell integrity, in a diphosphoinositol polyphosphate phosphohydrolase
    • Safrany S.T., Caffrey J.J., Yang X., Bembenek M.E., Moyer M.B., Burkhart W.A., Shears S.B. A novel context for the 'MutT' module, a guardian of cell integrity, in a diphosphoinositol polyphosphate phosphohydrolase. EMBO J. 17:1998;6599-6607.
    • (1998) EMBO J. , vol.17 , pp. 6599-6607
    • Safrany, S.T.1    Caffrey, J.J.2    Yang, X.3    Bembenek, M.E.4    Moyer, M.B.5    Burkhart, W.A.6    Shears, S.B.7
  • 35
    • 0033564627 scopus 로고    scopus 로고
    • Sm and Sm-like proteins assemble in two related complexes of deep evolutionary origin
    • Salgado-Garrido J., Bragado-Nilsson E., Kandels-Lewis S., Seraphin B. Sm and Sm-like proteins assemble in two related complexes of deep evolutionary origin. EMBO J. 18:1999;3451-3462.
    • (1999) EMBO J. , vol.18 , pp. 3451-3462
    • Salgado-Garrido, J.1    Bragado-Nilsson, E.2    Kandels-Lewis, S.3    Seraphin, B.4
  • 36
    • 0037322952 scopus 로고    scopus 로고
    • The enhancer of decapping proteins, Edc1p and Edc2p, bind RNA and stimulate the activity of the decapping enzyme
    • Schwartz D., Decker C.J., Parker R. The enhancer of decapping proteins, Edc1p and Edc2p, bind RNA and stimulate the activity of the decapping enzyme. RNA. 9:2003;239-251.
    • (2003) RNA , vol.9 , pp. 239-251
    • Schwartz, D.1    Decker, C.J.2    Parker, R.3
  • 39
    • 0033544937 scopus 로고    scopus 로고
    • Identification of a U8 snoRNA-specific binding protein
    • Tomasevic N., Peculis B. Identification of a U8 snoRNA-specific binding protein. J. Biol. Chem. 274:1999;35914-35920.
    • (1999) J. Biol. Chem. , vol.274 , pp. 35914-35920
    • Tomasevic, N.1    Peculis, B.2
  • 40
    • 0036261559 scopus 로고    scopus 로고
    • Xenopus LSm proteins bind U8 snoRNA via an internal evolutionarily conserved octamer sequence
    • Tomasevic N., Peculis B.A. Xenopus LSm proteins bind U8 snoRNA via an internal evolutionarily conserved octamer sequence. Mol. Cell. Biol. 22:2002;4101-4112.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 4101-4112
    • Tomasevic, N.1    Peculis, B.A.2
  • 41
    • 0033790503 scopus 로고    scopus 로고
    • Mechanisms and control of mRNA decapping in Saccharomyces cerevisiae
    • Tucker M., Parker R. Mechanisms and control of mRNA decapping in Saccharomyces cerevisiae. Annu. Rev. Biochem. 69:2000;571-595.
    • (2000) Annu. Rev. Biochem. , vol.69 , pp. 571-595
    • Tucker, M.1    Parker, R.2
  • 42
    • 0024394168 scopus 로고
    • U3, U8 and U13 comprise a new class of mammalian snRNPs localized in the cell nucleolus
    • Tyc K., Steitz J.A. U3, U8 and U13 comprise a new class of mammalian snRNPs localized in the cell nucleolus. EMBO J. 8:1989;3113-3119.
    • (1989) EMBO J. , vol.8 , pp. 3113-3119
    • Tyc, K.1    Steitz, J.A.2
  • 43
    • 0037121926 scopus 로고    scopus 로고
    • Human Dcp2: A catalytically active mRNA decapping enzyme located in specific cytoplasmic structures
    • van Dijk E., Cougot N., Meyer S., Babajko S., Wahle E., Seraphin B. Human Dcp2. a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures EMBO J. 21:2002;6915-6924.
    • (2002) EMBO J. , vol.21 , pp. 6915-6924
    • Van Dijk, E.1    Cougot, N.2    Meyer, S.3    Babajko, S.4    Wahle, E.5    Seraphin, B.6
  • 44
    • 0033367325 scopus 로고    scopus 로고
    • Ribosome synthesis in Saccharomyces cerevisiae
    • Venema J., Tollervey D. Ribosome synthesis in Saccharomyces cerevisiae. Annu. Rev. Genet. 33:1999;261-311.
    • (1999) Annu. Rev. Genet. , vol.33 , pp. 261-311
    • Venema, J.1    Tollervey, D.2
  • 47
    • 0033153297 scopus 로고    scopus 로고
    • Guided tours: From precursor snoRNA to functional snoRNP
    • Weinstein L.B., Steitz J.A. Guided tours. from precursor snoRNA to functional snoRNP Curr. Opin. Cell Biol. 11:1999;378-384.
    • (1999) Curr. Opin. Cell Biol. , vol.11 , pp. 378-384
    • Weinstein, L.B.1    Steitz, J.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.