메뉴 건너뛰기




Volumn 18, Issue 15, 1999, Pages 4321-4331

Characterization of Sm-like proteins in yeast and their association with U6 snRNA

Author keywords

Lsm; Sm proteins; snRNP; Splicing; U6 snRNP

Indexed keywords

FUNGAL PROTEIN; SMALL NUCLEAR RNA;

EID: 0033517098     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/18.15.4321     Document Type: Article
Times cited : (199)

References (48)
  • 2
    • 0031841817 scopus 로고    scopus 로고
    • Capped mRNA degradation intermediates accumulate in the yeast spb8-2 mutant
    • Boeck, R., Lapeyre, B., Brown, C.E. and Sachs, A.B. (1998) Capped mRNA degradation intermediates accumulate in the yeast spb8-2 mutant. Mol. Cell. Biol., 18, 5062-5072.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 5062-5072
    • Boeck, R.1    Lapeyre, B.2    Brown, C.E.3    Sachs, A.B.4
  • 3
    • 0030591812 scopus 로고    scopus 로고
    • The yeast SME1 gene encodes the homologue of the human E core protein
    • Bordonnex́, R. and Tarassov, I. (1996) The yeast SME1 gene encodes the homologue of the human E core protein. Gene, 176, 111-117.
    • (1996) Gene , vol.176 , pp. 111-117
    • Bordonnex́, R.1    Tarassov, I.2
  • 4
    • 0020338524 scopus 로고
    • U2 snRNA shares a structural domain with U1, U4 and U5 snRNAs
    • Branlant, C., Krol, A., Ebel, J.P., Lazar, E., Bernard, H. and Jacob, M. (1982) U2 snRNA shares a structural domain with U1, U4 and U5 snRNAs. EMBO J., 1, 1259-1265.
    • (1982) Embo J. , vol.1 , pp. 1259-1265
    • Branlant, C.1    Krol, A.2    Ebel, J.P.3    Lazar, E.4    Bernard, H.5    Jacob, M.6
  • 5
    • 0023782352 scopus 로고
    • Spliceosomal RNA U6 is remarkably conserved from yeast to mammals
    • Brow, D.A. and Guthrie, C. (1988) Spliceosomal RNA U6 is remarkably conserved from yeast to mammals. Nature, 334, 213-218.
    • (1988) Nature , vol.334 , pp. 213-218
    • Brow, D.A.1    Guthrie, C.2
  • 7
    • 0029054375 scopus 로고
    • Identification and characterization of Uss1p (Sdb23p): A novel U6 snRNA-associated protein with significant similarity to core proteins of small nuclear ribonucleoprotein particles
    • Cooper, M., Parkes, V., Johnston, L.H. and Beggs, J.D. (1995) Identification and characterization of Uss1p (Sdb23p): a novel U6 snRNA-associated protein with significant similarity to core proteins of small nuclear ribonucleoprotein particles. EMBO J., 14, 2066-2075.
    • (1995) EMBO J. , vol.14 , pp. 2066-2075
    • Cooper, M.1    Parkes, V.2    Johnston, L.H.3    Beggs, J.D.4
  • 8
    • 0024999077 scopus 로고
    • 3G cap in the transport of U1 snRNP to the nucleus
    • 3G cap in the transport of U1 snRNP to the nucleus. Science, 249, 786-790.
    • (1990) Science , vol.249 , pp. 786-790
    • Fischer, U.1    Lührmann, R.2
  • 9
    • 0030963019 scopus 로고    scopus 로고
    • Towards a functional analysis of the yeast genome through exhaustive two-hybrid screens
    • Fromont-Racine, M., Rain, J.-C. and Legrain, P. (1997) Towards a functional analysis of the yeast genome through exhaustive two-hybrid screens. Nature Genet., 16, 277-282.
    • (1997) Nature Genet. , vol.16 , pp. 277-282
    • Fromont-Racine, M.1    Rain, J.-C.2    Legrain, P.3
  • 10
    • 0030579098 scopus 로고    scopus 로고
    • U6 snRNA maturation and stability
    • Fury, M.G. and Zieve, G.W. (1996) U6 snRNA maturation and stability. Exp. Cell Res., 228, 160-163.
    • (1996) Exp. Cell Res. , vol.228 , pp. 160-163
    • Fury, M.G.1    Zieve, G.W.2
  • 11
    • 0031586612 scopus 로고    scopus 로고
    • Multiple protein:Protein interactions between the snRNP core proteins
    • Fury, M.G., Zang, W., Christodoulopoulos, I. and Zieve, G.W. (1997) Multiple protein:protein interactions between the snRNP core proteins. Exp. Cell Res., 237, 63-69.
    • (1997) Exp. Cell Res. , vol.237 , pp. 63-69
    • Fury, M.G.1    Zang, W.2    Christodoulopoulos, I.3    Zieve, G.W.4
  • 12
    • 0026562884 scopus 로고
    • Improved method for high efficiency transformation of intact yeast cells
    • Geitz, D., St Jean, A., Woods, R.A. and Schiestl, R.H. (1992) Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res., 20, 1425.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 1425
    • Geitz, D.1    St Jean, A.2    Woods, R.A.3    Schiestl, R.H.4
  • 13
    • 0029285869 scopus 로고
    • Specificity of Prp24 binding to RNA: A role for Prp24 in the dynamic interaction of U4 and U6 snRNAs
    • Ghetti, A., Company, M. and Abelson, J. (1995) Specificity of Prp24 binding to RNA: a role for Prp24 in the dynamic interaction of U4 and U6 snRNAs. RNA, 1, 132-145.
    • (1995) RNA , vol.1 , pp. 132-145
    • Ghetti, A.1    Company, M.2    Abelson, J.3
  • 14
    • 0029798510 scopus 로고    scopus 로고
    • The miniaturized nuclear genome of a eukaryotic endosymbiont contains genes that overlap, genes that are co-transcribed, and the smallest known spliceosomal introns
    • Gilson, P.R. and McFadden, G.I. (1996) The miniaturized nuclear genome of a eukaryotic endosymbiont contains genes that overlap, genes that are co-transcribed, and the smallest known spliceosomal introns. Proc. Natl Acad. Sci USA, 93, 7737-7742.
    • (1996) Proc. Natl Acad. Sci USA , vol.93 , pp. 7737-7742
    • Gilson, P.R.1    McFadden, G.I.2
  • 15
    • 0031899237 scopus 로고    scopus 로고
    • A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins
    • Gottschalk, A. et al. (1998) A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins. RNA, 4, 374-393.
    • (1998) RNA , vol.4 , pp. 374-393
    • Gottschalk, A.1
  • 16
    • 0025007910 scopus 로고
    • The trimethylguanosine cap structure of U1 snRNA is a component of a bipartite nuclear targeting signal
    • Hamm, J., Darzynkiewicy, E., Tahara, S. and Mattaj, I.W. (1990) The trimethylguanosine cap structure of U1 snRNA is a component of a bipartite nuclear targeting signal. Cell, 62, 569-577.
    • (1990) Cell , vol.62 , pp. 569-577
    • Hamm, J.1    Darzynkiewicy, E.2    Tahara, S.3    Mattaj, I.W.4
  • 17
    • 0029054377 scopus 로고
    • snRNP Sm proteins share two evolutionarily conserved sequence motifs which are involved in Sm protein-protein interactions
    • Hermann, H., Fabrizio, P., Raker, V.A., Foulaki, K., Hornig, H., Brahms, H. and Lührmann, R. (1995) snRNP Sm proteins share two evolutionarily conserved sequence motifs which are involved in Sm protein-protein interactions. EMBO J., 14, 2076-2088.
    • (1995) EMBO J. , vol.14 , pp. 2076-2088
    • Hermann, H.1    Fabrizio, P.2    Raker, V.A.3    Foulaki, K.4    Hornig, H.5    Brahms, H.6    Lührmann, R.7
  • 18
    • 0029163563 scopus 로고
    • RNA chaperones and the RNA folding problem
    • Herschlag, D. (1995) RNA chaperones and the RNA folding problem. J. Biol. Chem., 270, 20871-20874.
    • (1995) J. Biol. Chem. , vol.270 , pp. 20871-20874
    • Herschlag, D.1
  • 19
    • 0029018708 scopus 로고
    • Identification of a new family of tissue-specific basic helix-loop-helix proteins with a two-hybrid system
    • Hollenberg, S.M., Sternglanz, R., Cheng, P.F. and Weintraub, H. (1995) Identification of a new family of tissue-specific basic helix-loop-helix proteins with a two-hybrid system. Mol. Cell. Biol., 15, 3813-3822.
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 3813-3822
    • Hollenberg, S.M.1    Sternglanz, R.2    Cheng, P.F.3    Weintraub, H.4
  • 20
    • 0028291638 scopus 로고
    • Mutational analysis of the PRP4 protein of Saccharomyces cerevisiae suggests domain structure and snRNP interactions
    • Hu, J., Xu, Y., Schappert, K., Harrington, T., Wang, A., Braga, R., Mogridge, J. and Friesen, J.D. (1994) Mutational analysis of the PRP4 protein of Saccharomyces cerevisiae suggests domain structure and snRNP interactions. Nucleic Acids Res., 22, 1724-1734.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 1724-1734
    • Hu, J.1    Xu, Y.2    Schappert, K.3    Harrington, T.4    Wang, A.5    Braga, R.6    Mogridge, J.7    Friesen, J.D.8
  • 21
    • 0025932166 scopus 로고
    • Depletion of U3 small nucleolar RNA inhibits cleavage in the 5′ external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNA
    • Hughes, J. and Ares, M. (1991) Depletion of U3 small nucleolar RNA inhibits cleavage in the 5′ external transcribed spacer of yeast pre-ribosomal RNA and impairs formation of 18S ribosomal RNA. EMBO J., 10, 4231-4239.
    • (1991) EMBO J. , vol.10 , pp. 4231-4239
    • Hughes, J.1    Ares, M.2
  • 22
    • 0028968226 scopus 로고
    • Evidence for a Prp24 binding site in U6 snRNA and in a putative intermediate in the annealing of U6 and U4 snRNAs
    • Jandrositz, A. and Guthrie, C. (1995) Evidence for a Prp24 binding site in U6 snRNA and in a putative intermediate in the annealing of U6 and U4 snRNAs. EMBO J., 14, 820-832.
    • (1995) EMBO J. , vol.14 , pp. 820-832
    • Jandrositz, A.1    Guthrie, C.2
  • 23
    • 0033524941 scopus 로고    scopus 로고
    • Crystal structures of two Sm protein complexes and their implications for the assembly of the spliceosomal snRNPs
    • Kambach, C., Walke, S., Young, R., Avis, J.M., de la Fortelle, E., Raker, V.A., Lührmann, R., Li, J. and Nagai, K. (1999) Crystal structures of two Sm protein complexes and their implications for the assembly of the spliceosomal snRNPs. Cell, 96, 375-387.
    • (1999) Cell , vol.96 , pp. 375-387
    • Kambach, C.1    Walke, S.2    Young, R.3    Avis, J.M.4    De La Fortelle, E.5    Raker, V.A.6    Lührmann, R.7    Li, J.8    Nagai, K.9
  • 24
    • 0031458333 scopus 로고    scopus 로고
    • The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
    • Klenk, H.P. et al. (1997) The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus. Nature, 390, 364-370.
    • (1997) Nature , vol.390 , pp. 364-370
    • Klenk, H.P.1
  • 25
    • 0029891101 scopus 로고    scopus 로고
    • The structure and function of proteins involved in mammalian pre-mRNA splicing
    • Krämer, A. (1996) The structure and function of proteins involved in mammalian pre-mRNA splicing. Annu. Rev. Biochem., 65, 367-409.
    • (1996) Annu. Rev. Biochem. , vol.65 , pp. 367-409
    • Krämer, A.1
  • 26
    • 0000341684 scopus 로고
    • Antibodies to small nuclear RNAs complexed with proteins are produced by patients with systemic lupus erythematosus
    • Lerner, M.R. and Steitz, J.A. (1979) Antibodies to small nuclear RNAs complexed with proteins are produced by patients with systemic lupus erythematosus. Proc. Natl Acad. Sci. USA, 76, 5495-5499.
    • (1979) Proc. Natl Acad. Sci. USA , vol.76 , pp. 5495-5499
    • Lerner, M.R.1    Steitz, J.A.2
  • 28
    • 0023047717 scopus 로고
    • Cap trimethylation of U snRNA is cytoplasmic and dependent on U snRNP protein binding
    • Mattaj, I.W. (1986) Cap trimethylation of U snRNA is cytoplasmic and dependent on U snRNP protein binding. Cell, 46, 905-911.
    • (1986) Cell , vol.46 , pp. 905-911
    • Mattaj, I.W.1
  • 29
    • 0021926473 scopus 로고
    • Nuclear segregation of U2 snRNA requires binding of specific snRNP proteins
    • Mattaj, I.W. and DeRobertis, E.M. (1985) Nuclear segregation of U2 snRNA requires binding of specific snRNP proteins. Cell, 40, 111-118.
    • (1985) Cell , vol.40 , pp. 111-118
    • Mattaj, I.W.1    DeRobertis, E.M.2
  • 30
    • 0001877802 scopus 로고
    • Splicing of precursors to messenger RNAs by the spliceosome
    • Gesteland, R.F. and Atkins, J.F. (eds). Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Moore, M.J., Query, C.C. and Sharp, P.A., (1993) Splicing of precursors to messenger RNAs by the spliceosome. In Gesteland, R.F. and Atkins, J.F. (eds). The RNA World. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp. 303-357.
    • (1993) The RNA World , pp. 303-357
    • Moore, M.J.1    Query, C.C.2    Sharp, P.A.3
  • 31
    • 0031029388 scopus 로고    scopus 로고
    • Identification of the proteins of the yeast U1 small nuclear ribonucleoprotein complex by mass spectrometry
    • Neubauer, G., Gottschalk, A., Fabrizio, P., Séraphin, B., Lührmann, R. and Mann, M. (1997) Identification of the proteins of the yeast U1 small nuclear ribonucleoprotein complex by mass spectrometry. Proc. Natl Acad. Sci. USA, 94, 385-390.
    • (1997) Proc. Natl Acad. Sci. USA , vol.94 , pp. 385-390
    • Neubauer, G.1    Gottschalk, A.2    Fabrizio, P.3    Séraphin, B.4    Lührmann, R.5    Mann, M.6
  • 32
    • 0032535451 scopus 로고    scopus 로고
    • A role for the yeast La protein in U6 snRNP assembly: Evidence that the La protein is a molecular chaperone for RNA polymerase III transcripts
    • Pannone, B.K., Xue, D. and Wolin, S.L. (1998) A role for the yeast La protein in U6 snRNP assembly: evidence that the La protein is a molecular chaperone for RNA polymerase III transcripts. EMBO J., 17, 7442-7453.
    • (1998) EMBO J. , vol.17 , pp. 7442-7453
    • Pannone, B.K.1    Xue, D.2    Wolin, S.L.3
  • 33
    • 0026446689 scopus 로고
    • SPO12 and SIT4 suppress mutations in DBF2, which encodes a cell cycle protein kinase that is periodically expressed
    • Parkes, V. and Johnston, L.H. (1992) SPO12 and SIT4 suppress mutations in DBF2, which encodes a cell cycle protein kinase that is periodically expressed. Nucleic Acids Res., 20, 5617-5623.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 5617-5623
    • Parkes, V.1    Johnston, L.H.2
  • 34
    • 0031575412 scopus 로고    scopus 로고
    • Electron microscopy of assembly intermediates of the snRNP core: Morphological similarities between the RNA-free (E.F.G) protein heteromer and the intact snRNP core
    • Plessel, G., Lührmann, R. and Kastner, B. (1997) Electron microscopy of assembly intermediates of the snRNP core: morphological similarities between the RNA-free (E.F.G) protein heteromer and the intact snRNP core. J. Mol. Biol., 265, 87-94.
    • (1997) J. Mol. Biol. , vol.265 , pp. 87-94
    • Plessel, G.1    Lührmann, R.2    Kastner, B.3
  • 35
    • 0032488860 scopus 로고    scopus 로고
    • A spliceosomal recycling factor that reanneals U4 and U6 small nuclear ribonucleoprotein particles
    • Ragunathan, P.L. and Guthrie, C. (1998a) A spliceosomal recycling factor that reanneals U4 and U6 small nuclear ribonucleoprotein particles. Science, 279, 857-860.
    • (1998) Science , vol.279 , pp. 857-860
    • Ragunathan, P.L.1    Guthrie, C.2
  • 36
    • 0032537739 scopus 로고    scopus 로고
    • RNA unwinding in U4/U6 snRNPs requires ATP hydrolysis and DEIH-box splicing factor Brr2
    • Ragunathan, P.L. and Guthrie, C. (1998b) RNA unwinding in U4/U6 snRNPs requires ATP hydrolysis and DEIH-box splicing factor Brr2. Curr. Biol. 8, 847-855.
    • (1998) Curr. Biol. , vol.8 , pp. 847-855
    • Ragunathan, P.L.1    Guthrie, C.2
  • 37
    • 0030007060 scopus 로고    scopus 로고
    • The snRNP core assembly pathway: Identification of stable core protein heteromeric complexes and a snRNP subcore particle in vitro
    • Raker, V.A., Plessel, G. and Lührmann, R. (1996) The snRNP core assembly pathway: identification of stable core protein heteromeric complexes and a snRNP subcore particle in vitro. EMBO J., 15, 2256-2269.
    • (1996) EMBO J. , vol.15 , pp. 2256-2269
    • Raker, V.A.1    Plessel, G.2    Lührmann, R.3
  • 39
    • 0028950017 scopus 로고
    • Structurally related but functionally distinct yeast Sm D core snRNP proteins
    • Roy, J., Zheng, B., Rymond, B.C. and Woolford, J.L. (1995) Structurally related but functionally distinct yeast Sm D core snRNP proteins. Mol. Cell Biol. 15, 445-455.
    • (1995) Mol. Cell Biol. , vol.15 , pp. 445-455
    • Roy, J.1    Zheng, B.2    Rymond, B.C.3    Woolford, J.L.4
  • 40
    • 0027475858 scopus 로고
    • Convergent transcripts of the yeast PRP38-SMD1 locus encode two essential splicing factors, including the D1 core polypeptide of small nuclear ribonucleoprotein particles
    • Rymond, B.C. (1993) Convergent transcripts of the yeast PRP38-SMD1 locus encode two essential splicing factors, including the D1 core polypeptide of small nuclear ribonucleoprotein particles. Proc. Natl Acad. Sci. USA, 90, 848-852.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 848-852
    • Rymond, B.C.1
  • 41
    • 0027328727 scopus 로고
    • Human snRNP polypeptide D1 promotes pre-mRNA splicing in yeast and defines non essential yeast Smd1p sequences
    • Rymond, B.C., Rokeach, L.A. and Hoch, S.O. (1993) Human snRNP polypeptide D1 promotes pre-mRNA splicing in yeast and defines non essential yeast Smd1p sequences. Nucleic Acids Res., 21, 3501-3505.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 3501-3505
    • Rymond, B.C.1    Rokeach, L.A.2    Hoch, S.O.3
  • 42
    • 0025362399 scopus 로고
    • A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae
    • Schmitt, ME., Brown, T.A. and Trumpower, B.L. (1990) A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae. Nucleic Acids Res., 18, 3091.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 3091
    • Schmitt, M.E.1    Brown, T.A.2    Trumpower, B.L.3
  • 43
    • 0028997105 scopus 로고
    • Sm and Sm-like proteins belong to a large family: Identification of proteins of the U6 as well as the U1, U2, U4 and U5 snRNPs
    • Séraphin, B. (1995) Sm and Sm-like proteins belong to a large family: identification of proteins of the U6 as well as the U1, U2, U4 and U5 snRNPs. EMBO J., 14, 2089-2098.
    • (1995) EMBO J. , vol.14 , pp. 2089-2098
    • Séraphin, B.1
  • 44
    • 15644383855 scopus 로고    scopus 로고
    • Complete genome sequence of Methanobacterium thermoautotrophicumΔH: Functional analysis and comparative genomics
    • Smith, D.R. et al. (1997) Complete genome sequence of Methanobacterium thermoautotrophicumΔH: functional analysis and comparative genomics. J. Bacteriol., 179, 7135-7155.
    • (1997) J. Bacteriol. , vol.179 , pp. 7135-7155
    • Smith, D.R.1
  • 45
    • 0032489021 scopus 로고    scopus 로고
    • Mechanical devices of the spliceosome: Motors, clocks, springs, and things
    • Staley, J.P. and Guthrie, C. (1998) Mechanical devices of the spliceosome: motors, clocks, springs, and things. Cell, 92, 315-326.
    • (1998) Cell , vol.92 , pp. 315-326
    • Staley, J.P.1    Guthrie, C.2
  • 46
    • 0242722722 scopus 로고
    • Autoantibodies against small nuclear ribonucleoprotein components
    • van Venrooij, W.J. (1987) Autoantibodies against small nuclear ribonucleoprotein components. J. Rheumatol., 14, 78-82.
    • (1987) J. Rheumatol. , vol.14 , pp. 78-82
    • Van Venrooij, W.J.1
  • 47
    • 0027250250 scopus 로고
    • Mammalian ras interacts directly with the serine/threonine kinase raf
    • Vojtek, A.B., Hollenberg, S.M. and Cooper, J.A. (1993) Mammalian Ras interacts directly with the serine/threonine kinase Raf. Cell, 74, 205-214.
    • (1993) Cell , vol.74 , pp. 205-214
    • Vojtek, A.B.1    Hollenberg, S.M.2    Cooper, J.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.