-
1
-
-
0029053016
-
Degradation of mRNA in Eukaryotes
-
Beelman, C.A. and Parker, R. 1995. Degradation of mRNA in Eukaryotes. Cell 8: 179-183.
-
(1995)
Cell
, vol.8
, pp. 179-183
-
-
Beelman, C.A.1
Parker, R.2
-
2
-
-
0029758321
-
An essential component of the decapping enzyme required for normal rates of mRNA decay in yeast
-
Beelman, C.A., Stevens A., Caponigro G., LaGrandeur, T.E., Hatfield L., Fortner, D., and Parker, R. 1996. An essential component of the decapping enzyme required for normal rates of mRNA decay in yeast. Nature 38: 642-646.
-
(1996)
Nature
, vol.38
, pp. 642-646
-
-
Beelman, C.A.1
Stevens, A.2
Caponigro, G.3
LaGrandeur, T.E.4
Hatfield, L.5
Fortner, D.6
Parker, R.7
-
3
-
-
0030825306
-
Identification of proteins binding specifically to the 3′-untranslated region of granulocyte/macrophage-colony stimulating factor mRNA
-
Bichsel, V.E., Walz, A., and Bickel, M. 1997. Identification of proteins binding specifically to the 3′-untranslated region of granulocyte/macrophage-colony stimulating factor mRNA. Nucleic Acids Res. 25: 2417-2423.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 2417-2423
-
-
Bichsel, V.E.1
Walz, A.2
Bickel, M.3
-
4
-
-
0033866402
-
The two protein Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p
-
Bonnerot, C., Boeck, R., and Lapeyre, B. 2000. The two protein Pat1p (Mrt1p) and Spb8p interact in vivo, are required for mRNA decay, and are functionally linked to Pab1p. Mol. Cell. Biol. 20: 5939-5946.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 5939-5946
-
-
Bonnerot, C.1
Boeck, R.2
Lapeyre, B.3
-
5
-
-
0034599976
-
A Sm-like protein complex that participates in mRNA degradation
-
Bouveret, E., Rigaut, G., Shevchenko, A., Wilm, M., and Seraphin, B. 2000. A Sm-like protein complex that participates in mRNA degradation. EMBO J. 19: 1661-1671.
-
(2000)
EMBO J.
, vol.19
, pp. 1661-1671
-
-
Bouveret, E.1
Rigaut, G.2
Shevchenko, A.3
Wilm, M.4
Seraphin, B.5
-
6
-
-
0034839596
-
Computational modeling of eukaryotic mRNA turnover
-
Cao, D. and Parker, R. 2001. Computational modeling of eukaryotic mRNA turnover. RNA 7: 1192-1212.
-
(2001)
RNA
, vol.7
, pp. 1192-1212
-
-
Cao, D.1
Parker, R.2
-
7
-
-
0028809873
-
Multiple functions for the poly(A)-binding protein in mRNA decapping and deadenylation in yeast
-
Caponigro, G. and Parker, R. 1995. Multiple functions for the poly(A)-binding protein in mRNA decapping and deadenylation in yeast. Genes & Dev. 9: 2421-2432.
-
(1995)
Genes & Dev.
, vol.9
, pp. 2421-2432
-
-
Caponigro, G.1
Parker, R.2
-
8
-
-
0027198406
-
A small segment of the MATα1 transcript promotes mRNA decay in yeast: A stimulatory role for rare codons
-
Caponigro, G., Muhlrad, D., and Parker, R. 1993. A small segment of the MATα1 transcript promotes mRNA decay in yeast: A stimulatory role for rare codons. Mol. Cell. Biol. 13: 5141-5148.
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 5141-5148
-
-
Caponigro, G.1
Muhlrad, D.2
Parker, R.3
-
9
-
-
0030058701
-
Genetic analysis of glucose regulation in Saccharomyces cerevisiae: Control of transcription versus mRNA turnover
-
Cereghino, G.P. and Scheffier, I.E. 1996. Genetic analysis of glucose regulation in Saccharomyces cerevisiae: Control of transcription versus mRNA turnover. EMBO J. 15: 363-374.
-
(1996)
EMBO J.
, vol.15
, pp. 363-374
-
-
Cereghino, G.P.1
Scheffier, I.E.2
-
10
-
-
0035674477
-
The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes
-
Coller, J.M., Tucker, M., Sheth, U., Valencia-Sanchez, M.A., and Parker, R. 2001. The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes. RNA 7: 1717-1727.
-
(2001)
RNA
, vol.7
, pp. 1717-1727
-
-
Coller, J.M.1
Tucker, M.2
Sheth, U.3
Valencia-Sanchez, M.A.4
Parker, R.5
-
11
-
-
0027320701
-
A turnover pathway for both stable and unstable mRNAs in yeast: Evidence for a requirement for deadenylation
-
Decker, C.J. and Parker, R. 1993. A turnover pathway for both stable and unstable mRNAs in yeast: Evidence for a requirement for deadenylation. Genes & Dev. 7: 1632-1643.
-
(1993)
Genes & Dev.
, vol.7
, pp. 1632-1643
-
-
Decker, C.J.1
Parker, R.2
-
12
-
-
0030669030
-
Exploring the metabolic and genetic control of gene expression on a genomic scale
-
DeRisi, J.L., Iyer, V.R., and Brown, P.O. 1997. Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278: 680-686.
-
(1997)
Science
, vol.278
, pp. 680-686
-
-
DeRisi, J.L.1
Iyer, V.R.2
Brown, P.O.3
-
13
-
-
0033214061
-
The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif
-
Dunckley, T. and Parker, R. 1999. The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif. EMBO J. 18: 5411-5422.
-
(1999)
EMBO J.
, vol.18
, pp. 5411-5422
-
-
Dunckley, T.1
Parker, R.2
-
14
-
-
0034804505
-
Yeast mRNA decapping enzyme
-
-. 2001. Yeast mRNA decapping enzyme. Methods Enzymol. 342: 226-233.
-
(2001)
Methods Enzymol.
, vol.342
, pp. 226-233
-
-
-
15
-
-
0035148534
-
Two related proteins, Edc1p and Edc2p, stimulate mRNA decapping in Saccharomyces cerevisiae
-
Dunckley T., Tucker, M., and Parker, R. 2001. Two related proteins, Edc1p and Edc2p, stimulate mRNA decapping in Saccharomyces cerevisiae. Genetics 157: 27-37.
-
(2001)
Genetics
, vol.157
, pp. 27-37
-
-
Dunckley, T.1
Tucker, M.2
Parker, R.3
-
16
-
-
0037013898
-
The DEAD box protein Dhh1 stimulates the decapping enzyme Dcp1
-
Fischer, N. and Weis, K. 2002. The DEAD box protein Dhh1 stimulates the decapping enzyme Dcp1. EMBO J. 21: 2788-2797.
-
(2002)
EMBO J.
, vol.21
, pp. 2788-2797
-
-
Fischer, N.1
Weis, K.2
-
17
-
-
0035819859
-
Regulation of mRNA stability in mammalian cells
-
Guhaniyogi, J. and Brewer, G. 2001. Regulation of mRNA stability in mammalian cells. Gene 265: 11-23.
-
(2001)
Gene
, vol.265
, pp. 11-23
-
-
Guhaniyogi, J.1
Brewer, G.2
-
18
-
-
0029791555
-
Mutations in trans-acting factors affecting mRNA decapping in Saccharomyces cerevisiae
-
Hatfield, L., Beelman, C.A., Stevens, A., and Parker, R. 1996. Mutations in trans-acting factors affecting mRNA decapping in Saccharomyces cerevisiae. Mol. Cell. Biol. 16: 5830-5838.
-
(1996)
Mol. Cell. Biol.
, vol.16
, pp. 5830-5838
-
-
Hatfield, L.1
Beelman, C.A.2
Stevens, A.3
Parker, R.4
-
19
-
-
0027214097
-
Yeast cells lacking 5′ to 3′ exoribonuclease I contain mRNA species that are poly(A) deficient and partially lack the 5′ cap structure
-
Hsu, C.L. and Stevens, A. 1993. Yeast cells lacking 5′ to 3′ exoribonuclease I contain mRNA species that are poly(A) deficient and partially lack the 5′ cap structure. Mol. Cell. Biol. 13: 4826-4835.
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 4826-4835
-
-
Hsu, C.L.1
Stevens, A.2
-
20
-
-
0000577868
-
The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex
-
Jacobs-Anderson, J.S. and Parker, R. 1998. The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex. EMBO J. 17: 1497-1506.
-
(1998)
EMBO J.
, vol.17
, pp. 1497-1506
-
-
Jacobs-Anderson, J.S.1
Parker, R.2
-
21
-
-
0032473359
-
Isolation and characterization of Dcp1p, the yeast mRNA decapping enzyme
-
LaGrandeur, T.E. and Parker, R. 1998. Isolation and characterization of Dcp1p, the yeast mRNA decapping enzyme. EMBO J. 17: 1487-1496.
-
(1998)
EMBO J.
, vol.17
, pp. 1487-1496
-
-
LaGrandeur, T.E.1
Parker, R.2
-
22
-
-
0026441426
-
Mutations affecting stability and deadenylation of the yeast MFA2 transcript
-
Muhlrad, D. and Parker, R. 1992. Mutations affecting stability and deadenylation of the yeast MFA2 transcript. Genes & Dev. 6: 2100-2111.
-
(1992)
Genes & Dev.
, vol.6
, pp. 2100-2111
-
-
Muhlrad, D.1
Parker, R.2
-
23
-
-
0028202495
-
Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5′ to 3′ degradation of the transcript
-
Muhlrad, D., Decker, C., and Parker, R. 1994. Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5′ to 3′ degradation of the transcript. Genes & Dev. 8:855-866.
-
(1994)
Genes & Dev.
, vol.8
, pp. 855-866
-
-
Muhlrad, D.1
Decker, C.2
Parker, R.3
-
24
-
-
0028961870
-
Turnover mechanisms of the stable PGK1 mRNA in yeast
-
-. 1995. Turnover mechanisms of the stable PGK1 mRNA in yeast. Mol. Cell. Biol. 1: 2145-2156.
-
(1995)
Mol. Cell. Biol.
, vol.1
, pp. 2145-2156
-
-
-
25
-
-
0034388021
-
The Puf3 protein is a transcriptspecific regulator of mRNA degradation in yeast
-
Olivas, W. and Parker, R. 2000. The Puf3 protein is a transcriptspecific regulator of mRNA degradation in yeast. EMBO J. 19: 6602-6611.
-
(2000)
EMBO J.
, vol.19
, pp. 6602-6611
-
-
Olivas, W.1
Parker, R.2
-
26
-
-
0034640518
-
Glucose-regulated turnover of mRNA and the influence of poly(A) tail length on half-life
-
Prieto, S., de la Cruz, B.J., and Scheffler, I.E. 2000. Glucose-regulated turnover of mRNA and the influence of poly(A) tail length on half-life. J. Biol. Chem. 275: 14155-14166.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 14155-14166
-
-
Prieto, S.1
De la Cruz, B.J.2
Scheffler, I.E.3
-
27
-
-
0037053430
-
Modulation of eukaryotic mRNA stability via the cap-binding translation complex eIF4F
-
Ramirez, C.V., Vilela, C., Berthelot, K., and McCarthy, J.E. 2002. Modulation of eukaryotic mRNA stability via the cap-binding translation complex eIF4F. J. Mol. Biol. 318: 951-962.
-
(2002)
J. Mol. Biol.
, vol.318
, pp. 951-962
-
-
Ramirez, C.V.1
Vilela, C.2
Berthelot, K.3
McCarthy, J.E.4
-
28
-
-
0037020125
-
Coordinate regulation of sugar flux and translation by PAS kinase
-
Rutter, J., Probat, B.L., and McKnight, S.L. 2002. Coordinate regulation of sugar flux and translation by PAS kinase. Cell 111: 17-28.
-
(2002)
Cell
, vol.111
, pp. 17-28
-
-
Rutter, J.1
Probat, B.L.2
McKnight, S.L.3
-
29
-
-
0032778953
-
Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of yeast mRNAs
-
Schwartz, D. and Parker, R. 1999. Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of yeast mRNAs. Mol. Cell. Biol. 19: 5247-5256.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 5247-5256
-
-
Schwartz, D.1
Parker, R.2
-
30
-
-
0033773044
-
mRNA decapping in yeast requires dissociation of the cap binding protein, eukaryotic translation initiation factor 4E
-
-. 2000. mRNA decapping in yeast requires dissociation of the cap binding protein, eukaryotic translation initiation factor 4E. Mol. Cell. Biol. 20: 7933-7942.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 7933-7942
-
-
-
31
-
-
0037320851
-
Analysis of recombinant yeast decapping enzyme
-
this issue
-
Steiger, M., Carr-Schmid, A., Schwartz, D.C., Kiledjian, M., and Parker, R. 2003. Analysis of recombinant yeast decapping enzyme. RNA. (this issue).
-
(2003)
RNA
-
-
Steiger, M.1
Carr-Schmid, A.2
Schwartz, D.C.3
Kiledjian, M.4
Parker, R.5
-
32
-
-
0026661170
-
Early meiotic transcripts are highly unstable in Saccharomyces cerevisiae
-
Surosky, R.T. and Esposito, R.E. 1992. Early meiotic transcripts are highly unstable in Saccharomyces cerevisiae. Mol. Cell. Biol. 12: 3948-3958.
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 3948-3958
-
-
Surosky, R.T.1
Esposito, R.E.2
-
33
-
-
0032940545
-
Analysis of mutations in yeast mRNA decapping enzyme
-
Tharun, S. and Parker, R. 1999. Analysis of mutations in yeast mRNA decapping enzyme. Genetics 151: 1273-1285.
-
(1999)
Genetics
, vol.151
, pp. 1273-1285
-
-
Tharun, S.1
Parker, R.2
-
34
-
-
0035930337
-
Targeting an mRNA for decapping: Displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs
-
-. 2001. Targeting an mRNA for decapping: Displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs. Mol. Cell 8: 1075-1083.
-
(2001)
Mol. Cell
, vol.8
, pp. 1075-1083
-
-
-
35
-
-
0034732089
-
Yeast Sm-like proteins function in mRNA decapping and decay
-
Tharun, S., He, W., Mayes, A.E., Lennertz, P., Beggs, J.D., and Parker, R. 2000. Yeast Sm-like proteins function in mRNA decapping and decay. Nature 404: 515-518.
-
(2000)
Nature
, vol.404
, pp. 515-518
-
-
Tharun, S.1
He, W.2
Mayes, A.E.3
Lennertz, P.4
Beggs, J.D.5
Parker, R.6
-
36
-
-
0034663782
-
The eukaryotic mRNA decapping protein Dcpl interacts physically and functionally with the eIF4F translation initiation complex
-
Vilela, C., Velasco, C., Ptushkina, M., and McCarthy, J.E. 2000. The eukaryotic mRNA decapping protein Dcpl interacts physically and functionally with the eIF4F translation initiation complex. EMBO J. 19: 4372-4382.
-
(2000)
EMBO J.
, vol.19
, pp. 4372-4382
-
-
Vilela, C.1
Velasco, C.2
Ptushkina, M.3
McCarthy, J.E.4
-
37
-
-
0026740696
-
The rate limiting step in yeast PGK1 mRNA degradation is an endonucleolytic cleavage in the 3′ terminal part of the coding region
-
Vreken, P. and Raue, H.A. 1992. The rate limiting step in yeast PGK1 mRNA degradation is an endonucleolytic cleavage in the 3′ terminal part of the coding region. Mol. Cell Biol. 12: 2986-2996.
-
(1992)
Mol. Cell Biol.
, vol.12
, pp. 2986-2996
-
-
Vreken, P.1
Raue, H.A.2
-
38
-
-
0035320773
-
The cap-to-tail guide to mRNA turnover
-
Wilusz, C.J., Wormington, M., and Peltz, S.W. 2001. The cap-to-tail guide to mRNA turnover. Nat. Rev. Mol. Cell. Biol. 2: 237-246.
-
(2001)
Nat. Rev. Mol. Cell. Biol.
, vol.2
, pp. 237-246
-
-
Wilusz, C.J.1
Wormington, M.2
Peltz, S.W.3
-
39
-
-
0032823877
-
Monitoring mRNA decapping activity
-
Zhang, S., Williams, C.J., Wormington, M., Stevens, A., and Peltz, S.W. 1999. Monitoring mRNA decapping activity. Methods 17: 46-51.
-
(1999)
Methods
, vol.17
, pp. 46-51
-
-
Zhang, S.1
Williams, C.J.2
Wormington, M.3
Stevens, A.4
Peltz, S.W.5
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