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Volumn 5, Issue 1, 2004, Pages 17-38

A survey of nucleotide cyclases in Actinobacteria: Unique domain organization and expansion of the class III cyclase family in Mycobacterium tuberculosis

Author keywords

Actinobacteria; Adenylyl cyclase; Class III cyclase; Comparative genomics; Genome analysis; Mycobacterium leprae; Mycobacterium tuberculosis

Indexed keywords

ADENYLATE CYCLASE; LYASE; NUCLEOTIDE;

EID: 1542334336     PISSN: 15316912     EISSN: None     Source Type: Journal    
DOI: 10.1002/cfg.349     Document Type: Article
Times cited : (48)

References (92)
  • 2
    • 0025048827 scopus 로고
    • Differential expression of a family of putative adenylate/guanylate cyclase genes in Trpanosoma brucei
    • Alexandre S, Paindavoine P, Tebabi P, et al. 1990. Differential expression of a family of putative adenylate/guanylate cyclase genes in Trpanosoma brucei. Mol Biochem Parasitol 43: 279-288.
    • (1990) Mol. Biochem. Parasitol. , vol.43 , pp. 279-288
    • Alexandre, S.1    Paindavoine, P.2    Tebabi, P.3
  • 3
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • Altschul SF, Madden TL, Schaffer AA, et al. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schaffer, A.A.3
  • 4
    • 0037216619 scopus 로고    scopus 로고
    • Mutational analysis of a conserved signal-transducing element: The HAMP linker of the Escherichia coli nitrate sensor NarX
    • Appleman JA, Stewart V. 2003. Mutational analysis of a conserved signal-transducing element: the HAMP linker of the Escherichia coli nitrate sensor NarX. J Bacteriol 185: 89-97.
    • (2003) J. Bacteriol. , vol.185 , pp. 89-97
    • Appleman, J.A.1    Stewart, V.2
  • 5
    • 0035895540 scopus 로고    scopus 로고
    • Apoptotic molecular machinery: Vastly increased complexity in vertebrates revealed by genome comparisons
    • Aravind L, Dixit VM, Koonin EV. 2001. Apoptotic molecular machinery: vastly increased complexity in vertebrates revealed by genome comparisons. Science 291: 1279-1284.
    • (2001) Science , vol.291 , pp. 1279-1284
    • Aravind, L.1    Dixit, V.M.2    Koonin, E.V.3
  • 6
    • 0033119535 scopus 로고    scopus 로고
    • DNA polymerase β-like nucleotidy tidyltransferase superfamily: Identification of three new families, classification and evolutionary history
    • Aravind L, Koonin EV. 1999a. DNA polymerase β-like nucleotidy tidyltransferase superfamily: identification of three new families, classification and evolutionary history. Nucleic Acids Res 27: 1609-1618.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1609-1618
    • Aravind, L.1    Koonin, E.V.2
  • 7
    • 0032766134 scopus 로고    scopus 로고
    • The cytoplasmic helical linker domain of receptor histidine kinase and methyl-accepting proteins is common to many prokaryotic signalling proteins
    • Aravind L, Ponting CP. 1999b. The cytoplasmic helical linker domain of receptor histidine kinase and methyl-accepting proteins is common to many prokaryotic signalling proteins. FEMS Microbiol Lett 176: 111-116.
    • (1999) FEMS Microbiol. Lett. , vol.176 , pp. 111-116
    • Aravind, L.1    Ponting, C.P.2
  • 9
    • 0037046560 scopus 로고    scopus 로고
    • Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)
    • Bentley SD, Chater KF, Cerdeno-Tarraga AM, et al. 2002. Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2). Nature 417: 141-147.
    • (2002) Nature , vol.417 , pp. 141-147
    • Bentley, S.D.1    Chater, K.F.2    Cerdeno-Tarraga, A.M.3
  • 10
    • 0037460735 scopus 로고    scopus 로고
    • Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei
    • Bentley SD, Maiwald M, Murphy LD, et al. 2003. Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei. Lancet 361: 637-644.
    • (2003) Lancet , vol.361 , pp. 637-644
    • Bentley, S.D.1    Maiwald, M.2    Murphy, L.D.3
  • 11
    • 0035254334 scopus 로고    scopus 로고
    • Structural analysis of adenylate cyclases from Trypanosoma brucei in their monomeric state
    • Bieger B, Essen LO. 2001. Structural analysis of adenylate cyclases from Trypanosoma brucei in their monomeric state. EMBO J 20: 433-445.
    • (2001) EMBO J. , vol.20 , pp. 433-445
    • Bieger, B.1    Essen, L.O.2
  • 12
    • 0035448545 scopus 로고    scopus 로고
    • The evolution of mycobacterial pathogenicity: Clues from comparative genomics
    • Brosch R, Pym AS, Gordon SV, et al. 2001. The evolution of mycobacterial pathogenicity: clues from comparative genomics. Trends Microbiol 9: 452-458.
    • (2001) Trends Microbiol. , vol.9 , pp. 452-458
    • Brosch, R.1    Pym, A.S.2    Gordon, S.V.3
  • 13
    • 0032082047 scopus 로고    scopus 로고
    • Expression systems and physiological control of promoter activity in bacteria
    • Cases I, de Lorenzo V. 1998. Expression systems and physiological control of promoter activity in bacteria. Curr Opin Microbiol 1: 303-310.
    • (1998) Curr. Opin. Microbiol. , vol.1 , pp. 303-310
    • Cases, I.1    de Lorenzo, V.2
  • 14
    • 2942622828 scopus 로고    scopus 로고
    • CDART. Conserved Domain Architecture Retrieval Tool
    • CDART. Conserved Domain Architecture Retrieval Tool. http://www.ncbi.nlm.nih.gov/Structure/lexington/lexington.cgi?cmd=rps.
  • 15
    • 0036775772 scopus 로고    scopus 로고
    • Comparative and functional genomics of the Mycobacterium tuberculosis complex
    • Cole ST. 2002. Comparative and functional genomics of the Mycobacterium tuberculosis complex. Microbiology 148: 2919-2928.
    • (2002) Microbiology , vol.148 , pp. 2919-2928
    • Cole, S.T.1
  • 16
    • 0032508046 scopus 로고    scopus 로고
    • Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
    • Cole ST, Brosch R, Parkhill J, et al. 1998. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393: 537-544.
    • (1998) Nature , vol.393 , pp. 537-544
    • Cole, S.T.1    Brosch, R.2    Parkhill, J.3
  • 17
    • 0035931926 scopus 로고    scopus 로고
    • Massive gene decay in the leprosy bacillus
    • Cole ST, Eiglmeier K, Parkhill J, et al. 2001. Massive gene decay in the leprosy bacillus. Nature 409: 1007-1011.
    • (2001) Nature , vol.409 , pp. 1007-1011
    • Cole, S.T.1    Eiglmeier, K.2    Parkhill, J.3
  • 18
    • 0019973678 scopus 로고
    • Phagocyte impotence caused by an invasive bacterial adenytate cyclase
    • Confer DL, Eaton JW. 1982. Phagocyte impotence caused by an invasive bacterial adenytate cyclase. Science 217: 948-950.
    • (1982) Science , vol.217 , pp. 948-950
    • Confer, D.L.1    Eaton, J.W.2
  • 19
    • 0032528137 scopus 로고    scopus 로고
    • Identification of a novel adenylate cyclase in the ruminal anaerobe, Prevotella ruminicola D31d
    • Cotta MA, Whitehead TR, Wheeler MB. 1998. Identification of a novel adenylate cyclase in the ruminal anaerobe, Prevotella ruminicola D31d. FEMS Microbiol Lett 164: 257-260.
    • (1998) FEMS Microbiol. Lett. , vol.164 , pp. 257-260
    • Cotta, M.A.1    Whitehead, T.R.2    Wheeler, M.B.3
  • 21
    • 0027332712 scopus 로고
    • The adenylate cyclase catalytic domain of Streptomyes coelicolor is carboxy-terminal
    • Danchin A, Pidoux J, Krin E, et al. 1993. The adenylate cyclase catalytic domain of Streptomyes coelicolor is carboxy-terminal. FEMS Microbiol Lett 114: 145-151.
    • (1993) FEMS Microbiol. Lett. , vol.114 , pp. 145-151
    • Danchin, A.1    Pidoux, J.2    Krin, E.3
  • 22
    • 0033835813 scopus 로고    scopus 로고
    • Tissue specificity and physiological relevance of various isoforms of adenylyl cyclase
    • Defer N, Best-Belpomme M, Hanoune J. 2000. Tissue specificity and physiological relevance of various isoforms of adenylyl cyclase. Am J Physiol Renal Physiol 279: F400-416.
    • (2000) Am. J. Physiol. Renal. Physiol. , vol.279
    • Defer, N.1    Best-Belpomme, M.2    Hanoune, J.3
  • 23
    • 0037165139 scopus 로고    scopus 로고
    • Structural basis for the activation of anthrax adenylyl cyclase exotoxin by calmodulin
    • Drum CL, Yan SZ, Bard J, et al. 2002. Structural basis for the activation of anthrax adenylyl cyclase exotoxin by calmodulin. Nature 415: 396-402.
    • (2002) Nature , vol.415 , pp. 396-402
    • Drum, C.L.1    Yan, S.Z.2    Bard, J.3
  • 24
    • 0003818089 scopus 로고    scopus 로고
    • HMMER: Profile hidden Markov models for biological sequence analysis
    • Eddy SR. 2001. HMMER: Profile hidden Markov models for biological sequence analysis. http://hmmer.wustl.edu/.
    • (2001)
    • Eddy, S.R.1
  • 25
    • 0036777599 scopus 로고    scopus 로고
    • Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains
    • Fleischmann RD, Alland D, Eisen JA, et al. 2002. Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains. J Bacteriol 184: 5479-5490.
    • (2002) J. Bacteriol. , vol.184 , pp. 5479-5490
    • Fleischmann, R.D.1    Alland, D.2    Eisen, J.A.3
  • 26
    • 0027451430 scopus 로고
    • Stimulation of Trypanosoma cruzi adenylyl cyclase by an αD-globin fragment from Triatoma hindgut: Effect on differentiation of epimastigote to trypomastigote forms
    • Fraidenraich D, Pena C, Isola EL, et al. 1993. Stimulation of Trypanosoma cruzi adenylyl cyclase by an αD-globin fragment from Triatoma hindgut: effect on differentiation of epimastigote to trypomastigote forms. Proc Natl Acad Sci USA 90: 10 140-10 144.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90
    • Fraidenraich, D.1    Pena, C.2    Isola, E.L.3
  • 27
    • 0035845587 scopus 로고    scopus 로고
    • Novel domains of the prokaryotic two-component signal transduction systems
    • Galperin MY, Nikolskaya AN, Koonin EV. 2001. Novel domains of the prokaryotic two-component signal transduction systems. FEMS Microbiol Lett 203: 11-21.
    • (2001) FEMS Microbiol. Lett. , vol.203 , pp. 11-21
    • Galperin, M.Y.1    Nikolskaya, A.N.2    Koonin, E.V.3
  • 29
    • 0036136816 scopus 로고    scopus 로고
    • Degradation of aromatics and chloroaromatics by Pseudomonas sp. strain B 13: Cloning, characterization, and analysis of sequences encoding 3-oxoadipate: Succinyl-coenzyme A (CoA) transferase and 3-oxoadipyl-CoA thiolase
    • Gobel M, Kassel-Cati K, Schmidt E, et al. 2002. Degradation of aromatics and chloroaromatics by Pseudomonas sp. strain B 13: cloning, characterization, and analysis of sequences encoding 3-oxoadipate: succinyl-coenzyme A (CoA) transferase and 3-oxoadipyl-CoA thiolase. J Bacteriol 184: 216-223.
    • (2002) J. Bacteriol. , vol.184 , pp. 216-223
    • Gobel, M.1    Kassel-Cati, K.2    Schmidt, E.3
  • 30
    • 0035898614 scopus 로고    scopus 로고
    • Adenylyl cyclase Rv1625c of Mycobacterium tuberculosis: A progenitor of mammalian adenylyl cyclases
    • Guo YL, Seebacher T, Kurz U, et al. 2001. Adenylyl cyclase Rv1625c of Mycobacterium tuberculosis: a progenitor of mammalian adenylyl cyclases. EMBO J 20: 3667-3675.
    • (2001) EMBO J. , vol.20 , pp. 3667-3675
    • Guo, Y.L.1    Seebacher, T.2    Kurz, U.3
  • 31
    • 0034644783 scopus 로고    scopus 로고
    • Analysis and prediction of functional sub-types from protein sequence alignments
    • Hannenhalli SS, Russell RB. 2000. Analysis and prediction of functional sub-types from protein sequence alignments. J Mol Biol 303: 61-76.
    • (2000) J. Mol. Biol. , vol.303 , pp. 61-76
    • Hannenhalli, S.S.1    Russell, R.B.2
  • 32
    • 0027930622 scopus 로고
    • Anthrax edema toxin differentially regulates lipopolysaccharide-induced monocyte production of tumor necrosis factor α and interleukin-6 by increasing intracellular cyclic AMP
    • Hoover DL, Friedlander AM, Rogers LC, et al. 1994. Anthrax edema toxin differentially regulates lipopolysaccharide-induced monocyte production of tumor necrosis factor α and interleukin-6 by increasing intracellular cyclic AMP. Infect Immun 62: 4432-4439.
    • (1994) Infect. Immun. , vol.62 , pp. 4432-4439
    • Hoover, D.L.1    Friedlander, A.M.2    Rogers, L.C.3
  • 33
    • 0025250635 scopus 로고
    • Primary structure of AfsR, a global regulatory protein for secondary metabolite formation in Streptomyces coelicolor A3(2)
    • Horinouchi S, Kito M, Nishiyama M, et al. 1990. Primary structure of AfsR, a global regulatory protein for secondary metabolite formation in Streptomyces coelicolor A3(2). Gene 95: 49-56.
    • (1990) Gene , vol.95 , pp. 49-56
    • Horinouchi, S.1    Kito, M.2    Nishiyama, M.3
  • 34
    • 0035734689 scopus 로고    scopus 로고
    • The A-factor regulatory cascade and cAMP in the regulation of physiological and morphological development in Streptomyces griseus
    • Horinouchi S, Ohnishi Y, Kang DK. 2001. The A-factor regulatory cascade and cAMP in the regulation of physiological and morphological development in Streptomyces griseus. J Ind Microbiol Biotechnol 27: 177-182.
    • (2001) J. Ind. Microbiol. Biotechnol. , vol.27 , pp. 177-182
    • Horinouchi, S.1    Ohnishi, Y.2    Kang, D.K.3
  • 35
    • 0034658130 scopus 로고    scopus 로고
    • ATP-activated oligomerization as a mechanism for apoptosis regulation: Fold and mechanism prediction for CED-4
    • Jaroszewski L, Rychlewski L, Reed JC, et al. 2000. ATP-activated oligomerization as a mechanism for apoptosis regulation: fold and mechanism prediction for CED-4. Proteins 39: 197-203.
    • (2000) Proteins , vol.39 , pp. 197-203
    • Jaroszewski, L.1    Rychlewski, L.2    Reed, J.C.3
  • 37
    • 0035053858 scopus 로고    scopus 로고
    • Comparing genomes within the species Mycobacterium tuberculosis
    • Kato-Maeda M, Rhee JT, Gingeras TR, et al. 2001. Comparing genomes within the species Mycobacterium tuberculosis. Genome Res 11: 547-554.
    • (2001) Genome Res. , vol.11 , pp. 547-554
    • Kato-Maeda, M.1    Rhee, J.T.2    Gingeras, T.R.3
  • 39
    • 0000947082 scopus 로고
    • Anthrax toxin edema factor: A bacterial adenylate cyclase that increases cyclic AMP concentrations of eukaryotic cells
    • Leppla SH. 1982. Anthrax toxin edema factor: a bacterial adenylate cyclase that increases cyclic AMP concentrations of eukaryotic cells. Proc Natl Acad Sci USA 79: 3162-3166.
    • (1982) Proc. Natl. Acad. Sci. USA , vol.79 , pp. 3162-3166
    • Leppla, S.H.1
  • 40
    • 0036086410 scopus 로고    scopus 로고
    • Recent improvements to the SMART domain-based sequence annotation resource
    • Letunic I, Goodstadt L, Dickens NJ, et al. 2002. Recent improvements to the SMART domain-based sequence annotation resource. Nucleic Acids Res 30: 242-244.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 242-244
    • Letunic, I.1    Goodstadt, L.2    Dickens, N.J.3
  • 41
    • 0037013276 scopus 로고    scopus 로고
    • Adenylyl cyclase Rv 1264 from Mycobacterium tuberculosis has an autoinhibitory N-terminal domain
    • Linder JU, Schultz A, Schultz JE. 2002. Adenylyl cyclase Rv 1264 from Mycobacterium tuberculosis has an autoinhibitory N-terminal domain. J Biol Chem 277: 15271-15276.
    • (2002) J. Biol. Chem. , vol.277 , pp. 15271-15276
    • Linder, J.U.1    Schultz, A.2    Schultz, J.E.3
  • 42
    • 0031473770 scopus 로고    scopus 로고
    • Catalytic mechanism of the adenylyl and guanylyl cyclases: Modeling and mutational analysis
    • Liu Y, Ruoho AE, Rao VD, et al. 1997. Catalytic mechanism of the adenylyl and guanylyl cyclases: modeling and mutational analysis. Proc Natl Acad Sci USA 94: 13414-13419.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 13414-13419
    • Liu, Y.1    Ruoho, A.E.2    Rao, V.D.3
  • 43
    • 0018426446 scopus 로고
    • Phagosome-lysosome fusion and cyclic adenosine 3′: 5′-monophosphate in macrophages infected with Mycobacterium microti, Mycobacterium bovis BCG or Mycobacterium lepraemurium
    • Lowrie DB, Aber VR, Jackett PS. 1979. Phagosome-lysosome fusion and cyclic adenosine 3′: 5′-monophosphate in macrophages infected with Mycobacterium microti, Mycobacterium bovis BCG or Mycobacterium lepraemurium. J Gen Microbiol 110: 431-441.
    • (1979) J. Gen. Microbiol. , vol.110 , pp. 431-441
    • Lowrie, D.B.1    Aber, V.R.2    Jackett, P.S.3
  • 44
    • 0016808761 scopus 로고
    • Mycobacterium microti may protect itself from intracellular destruction by releasing cyclic AMP into phagosomes
    • Lowrie DB, Jackett PS, Ratcliffe NA. 1975. Mycobacterium microti may protect itself from intracellular destruction by releasing cyclic AMP into phagosomes. Nature 254: 600-602.
    • (1975) Nature , vol.254 , pp. 600-602
    • Lowrie, D.B.1    Jackett, P.S.2    Ratcliffe, N.A.3
  • 45
    • 0016841067 scopus 로고
    • Brevibacterium liquefaciens adenylate cyclase and its in vivo stimulation by pyruvate
    • Lynch TJ, Tallant EA, Cheung WY. 1975. Brevibacterium liquefaciens adenylate cyclase and its in vivo stimulation by pyruvate. J Bacteriol 124: 1106-1112.
    • (1975) J. Bacteriol. , vol.124 , pp. 1106-1112
    • Lynch, T.J.1    Tallant, E.A.2    Cheung, W.Y.3
  • 46
    • 0034005701 scopus 로고    scopus 로고
    • Functional classification of cNMP-binding, proteins and nucleotide cyclases with implications for novel regulatory pathways in Mycobacterium tuberculosis
    • McCue LA, McDonough KA, Lawrence CE. 2000. Functional classification of cNMP-binding, proteins and nucleotide cyclases with implications for novel regulatory pathways in Mycobacterium tuberculosis. Genome Res 10: 204-219.
    • (2000) Genome Res. , vol.10 , pp. 204-219
    • McCue, L.A.1    McDonough, K.A.2    Lawrence, C.E.3
  • 47
    • 0032463744 scopus 로고    scopus 로고
    • Chemotaxis receptors: A progress report on structure and function
    • Mowbray SL, Sandgren MO. 1998. Chemotaxis receptors: a progress report on structure and function. J Struct Biol 124: 257-275.
    • (1998) J. Struct. Biol. , vol.124 , pp. 257-275
    • Mowbray, S.L.1    Sandgren, M.O.2
  • 48
    • 2942585839 scopus 로고    scopus 로고
    • NCBI FTP site for genomes. ftp://ftp.ncbi.nih.gov/genomes/Bacteria/
    • NCBI. FTP site for genomes. ftp://ftp.ncbi.nih.gov/genomes/Bacteria/.
  • 49
    • 2942596732 scopus 로고    scopus 로고
    • NCBI. NCBI BLAST Home Page
    • NCBI. NCBI BLAST Home Page. http://www.ncbi.nlm.nih.gov/BLAST/.
  • 50
    • 2942624670 scopus 로고    scopus 로고
    • NCBI. RPS-BLAST CD-search databases. ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/
    • NCBI. RPS-BLAST CD-search databases. ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/.
  • 51
    • 2942529578 scopus 로고    scopus 로고
    • NCBI. Taxonomy
    • NCBI. Taxonomy. http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Taxonomy.
  • 52
    • 0032969563 scopus 로고    scopus 로고
    • AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes
    • Neuwald AF, Aravind L, Spouge JL, et al. 1999. AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 9: 27-43.
    • (1999) Genome Res. , vol.9 , pp. 27-43
    • Neuwald, A.F.1    Aravind, L.2    Spouge, J.L.3
  • 53
    • 0034623005 scopus 로고    scopus 로고
    • T-Coffee: A novel method for fast and accurate multiple sequence alignment
    • Notredame C, Higgins DG, Heringa J. 2000. T-Coffee: a novel method for fast and accurate multiple sequence alignment. J Mol Biol 302: 205-217.
    • (2000) J. Mol. Biol. , vol.302 , pp. 205-217
    • Notredame, C.1    Higgins, D.G.2    Heringa, J.3
  • 55
    • 0035834039 scopus 로고    scopus 로고
    • Genome sequence of an industrial microorganism Streptomyces avermitilis: Deducing the ability of producing secondary metabolites
    • Omura S, Ikeda H, Ishikawa J, et al. 2001. Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites. Proc Natl Acad Sci USA 98: 12215-12220.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 12215-12220
    • Omura, S.1    Ikeda, H.2    Ishikawa, J.3
  • 56
    • 0035946414 scopus 로고    scopus 로고
    • The VSG expression sites of Tryponosoma brucei: Multipurpose tools for the adaptation of the parasite to mammalian hosts
    • Pays E, Lips S, Nolan D, et al. 2001. The VSG expression sites of Tryponosoma brucei: multipurpose tools for the adaptation of the parasite to mammalian hosts. Mol Biochem Parasitol 114: 1-16.
    • (2001) Mol. Biochem. Parasitol. , vol.114 , pp. 1-16
    • Pays, E.1    Lips, S.2    Nolan, D.3
  • 57
    • 0025734793 scopus 로고
    • A pyruvate-stimulated adenylate cyclase has a sequence related to the fes/fps oncogenes and to eukaryotic cyclases
    • Peters EP, Wilderspin AF, Wood SP, et al. 1991. A pyruvate-stimulated adenylate cyclase has a sequence related to the fes/fps oncogenes and to eukaryotic cyclases. Mol Microbiol 5: 1175-1181.
    • (1991) Mol. Microbiol. , vol.5 , pp. 1175-1181
    • Peters, E.P.1    Wilderspin, A.F.2    Wood, S.P.3
  • 58
    • 2942591189 scopus 로고    scopus 로고
    • Pfam. Protein Family Database
    • Pfam. Protein Family Database. http://www.sanger.ac.uk/Software/Pfam/.
  • 59
    • 0035860799 scopus 로고    scopus 로고
    • Eukaryotic-like adenylyl cyclases in Mycobacterium tuberculosis H37Rv: Cloning and characterization
    • Reddy SK, Kamireddi M, Dhanireddy K, et al. 2001. Eukaryotic-like adenylyl cyclases in Mycobacterium tuberculosis H37Rv: cloning and characterization. J Biol Chem 276: 35 141-35 149.
    • (2001) J. Biol. Chem. , vol.276
    • Reddy, S.K.1    Kamireddi, M.2    Dhanireddy, K.3
  • 60
    • 0035200240 scopus 로고    scopus 로고
    • Signaling through adenylyl cyclase is essential for hyphal growth and virulence in the pathogenic fungus Candida albicans
    • Rocha CR, Schroppel K, Harcus D, et al. 2001. Signaling through adenylyl cyclase is essential for hyphal growth and virulence in the pathogenic fungus Candida albicans. Mol Biol Cell 12: 3631-3643.
    • (2001) Mol. Biol. Cell , vol.12 , pp. 3631-3643
    • Rocha, C.R.1    Schroppel, K.2    Harcus, D.3
  • 61
    • 0027490495 scopus 로고
    • Transient adenylate cyclase activation accompanies differentiation of Trypanosoma brucei from bloodstream to procyclic forms
    • Rolin S, Paindavoine P, Hanocq-Quertier J, et al. 1993. Transient adenylate cyclase activation accompanies differentiation of Trypanosoma brucei from bloodstream to procyclic forms. Mol Biochem Parasitol 61: 115-125.
    • (1993) Mol. Biochem. Parasitol. , vol.61 , pp. 115-125
    • Rolin, S.1    Paindavoine, P.2    Hanocq-Quertier, J.3
  • 62
    • 0029150739 scopus 로고
    • A family of putative receptor-adenylate cyclases from Leishmania donovani
    • Sanchez MA, Zeoli D, Klamo EM, et al. 1995. A family of putative receptor-adenylate cyclases from Leishmania donovani. J Biol Chem 270: 17551-17558.
    • (1995) J. Biol. Chem. , vol.270 , pp. 17551-17558
    • Sanchez, M.A.1    Zeoli, D.2    Klamo, E.M.3
  • 63
    • 0038438514 scopus 로고    scopus 로고
    • IMPALA: Matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices
    • Schaffer AA, Wolf YI, Ponting CP, et al. 1999. IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices. Bioinformatics 15: 1000-1011.
    • (1999) Bioinformatics , vol.15 , pp. 1000-1011
    • Schaffer, A.A.1    Wolf, Y.I.2    Ponting, C.P.3
  • 64
    • 0037195083 scopus 로고    scopus 로고
    • The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract
    • Schell MA, Karmirantzou M, Snel B, et al. 2002. The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract. Proc Natl Acad Sci USA 99: 14422-14427.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 14422-14427
    • Schell, M.A.1    Karmirantzou, M.2    Snel, B.3
  • 65
    • 0038201922 scopus 로고    scopus 로고
    • Mutational analysis of the Mycobacterium tuberculosis Rv1625c adenylyl cyclase: Residues that confer nucleotide specificity contribute to dimerization
    • Shenoy AR, Srinivasan N, Subramaniam M, et al. 2003. Mutational analysis of the Mycobacterium tuberculosis Rv1625c adenylyl cyclase: residues that confer nucleotide specificity contribute to dimerization. FEBS Lett 545: 253-259.
    • (2003) FEBS Lett. , vol.545 , pp. 253-259
    • Shenoy, A.R.1    Srinivasan, N.2    Subramaniam, M.3
  • 66
    • 0036124391 scopus 로고    scopus 로고
    • The ascent of nucleotide cyclases: Conservation and evolution of a theme
    • Shenoy AR, Srinivasan N, Visweswariah SS. 2002. The ascent of nucleotide cyclases: conservation and evolution of a theme. J Biosci 27: 85-91.
    • (2002) J. Biosci. , vol.27 , pp. 85-91
    • Shenoy, A.R.1    Srinivasan, N.2    Visweswariah, S.S.3
  • 67
    • 0035912791 scopus 로고    scopus 로고
    • Regulation of the Mycobacterium tuberculosis hypoxic response gene encoding α-crystallin
    • Sherman DR, Voskuil M, Schnappinger D, et al. 2001. Regulation of the Mycobacterium tuberculosis hypoxic response gene encoding α-crystallin. Proc Natl Acad Sci USA 98: 7534-7539.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 7534-7539
    • Sherman, D.R.1    Voskuil, M.2    Schnappinger, D.3
  • 68
    • 0031801223 scopus 로고    scopus 로고
    • Aeromonas hydrophila adenylyl cyclase 2: A new class of adenylyl cyclases with thermophilic properties and sequence similarities to proteins from hyperthermophilic archaebacteria
    • Sismeiro O, Trotot P, Biville F, et al. 1998. Aeromonas hydrophila adenylyl cyclase 2: a new class of adenylyl cyclases with thermophilic properties and sequence similarities to proteins from hyperthermophilic archaebacteria. J Bacteriol 180: 3339-3344.
    • (1998) J. Bacteriol. , vol.180 , pp. 3339-3344
    • Sismeiro, O.1    Trotot, P.2    Biville, F.3
  • 69
    • 2942621153 scopus 로고    scopus 로고
    • SMART. Simple Modular Architechture Research Tool
    • SMART. Simple Modular Architechture Research Tool. http://smart.embl-heidelberg.de/.
  • 70
    • 0032568930 scopus 로고    scopus 로고
    • Exchange of substrate and inhibitor specificities between adenylyl and guanylyl cyclases
    • Sunahara RK, Beuve A, Tesmer JJ, et al. 1998. Exchange of substrate and inhibitor specificities between adenylyl and guanylyl cyclases. J Biol Chem 273: 16332-16338.
    • (1998) J. Biol. Chem. , vol.273 , pp. 16332-16338
    • Sunahara, R.K.1    Beuve, A.2    Tesmer, J.J.3
  • 71
    • 0031719202 scopus 로고    scopus 로고
    • Pleiotropic effects of cAMP on germination, antibiotic biosynthesis and morphological development in Streptomyces coelicolor
    • Susstrunk U, Pidoux J, Taubert S, et al. 1998. Pleiotropic effects of cAMP on germination, antibiotic biosynthesis and morphological development in Streptomyces coelicolor. Mol Microbiol 30: 33-46.
    • (1998) Mol. Microbiol. , vol.30 , pp. 33-46
    • Susstrunk, U.1    Pidoux, J.2    Taubert, S.3
  • 72
    • 0031820874 scopus 로고    scopus 로고
    • Catalytic mechanism and regulation of mammalian adenylyl cyclases
    • Tang WJ, Hurley JH. 1998. Catalytic mechanism and regulation of mammalian adenylyl cyclases. Mol Pharmacol 54: 231-240.
    • (1998) Mol. Pharmacol. , vol.54 , pp. 231-240
    • Tang, W.J.1    Hurley, J.H.2
  • 73
    • 0035162592 scopus 로고    scopus 로고
    • The COG database: New developments in phylogenetic classification of proteins from complete genomes
    • Tatusov RL, Natale DA, Garkavtsev IV, et al. 2001. The COG database: new developments in phylogenetic classification of proteins from complete genomes. Nucleic Acids Res 29: 22-28.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 22-28
    • Tatusov, R.L.1    Natale, D.A.2    Garkavtsev, I.V.3
  • 74
    • 0032738422 scopus 로고    scopus 로고
    • Trypanosoma cruzi adenylyl cyclase is encoded by a complex multigene family
    • Taylor MC, Muhia DK, Baker DA, et al. 1999. Trypanosoma cruzi adenylyl cyclase is encoded by a complex multigene family. Mol Biochem Parasitol 104: 205-217.
    • (1999) Mol. Biochem. Parasitol. , vol.104 , pp. 205-217
    • Taylor, M.C.1    Muhia, D.K.2    Baker, D.A.3
  • 75
    • 0036283566 scopus 로고    scopus 로고
    • The Rhizobium etli cyaC product: Characterization of a novel adenylate cyclase class
    • Tellez-Sosa J, Soberon N, Vega-Segura A, et al. 2002. The Rhizobium etli cyaC product: characterization of a novel adenylate cyclase class. J Bacteriol 184: 3560-3568.
    • (2002) J. Bacteriol. , vol.184 , pp. 3560-3568
    • Tellez-Sosa, J.1    Soberon, N.2    Vega-Segura, A.3
  • 76
    • 0032412405 scopus 로고    scopus 로고
    • The structure, catalytic mechanism and regulation of adenylyl cyclase
    • Tesmer JJ, Sprang SR. 1998. The structure, catalytic mechanism and regulation of adenylyl cyclase. Curr Opin Struct Biol 8: 713-719.
    • (1998) Curr. Opin. Struct. Biol. , vol.8 , pp. 713-719
    • Tesmer, J.J.1    Sprang, S.R.2
  • 77
    • 2642689663 scopus 로고    scopus 로고
    • Crystal structure of the catalytic domains of adenylyl cyclase in a complex with Gsα.GTPγS
    • Tesmer JJ, Sunahara RK, Gilman AG, et al. 1997. Crystal structure of the catalytic domains of adenylyl cyclase in a complex with Gsα.GTPγS. Science 278: 1907-1916.
    • (1997) Science , vol.278 , pp. 1907-1916
    • Tesmer, J.J.1    Sunahara, R.K.2    Gilman, A.G.3
  • 78
    • 2942622823 scopus 로고    scopus 로고
    • TIGR. Operon Information
    • TIGR. Operon Information. http://www.tigr.org/tigr-scripts/operons/pairs.cgi?taxon_id=89.
  • 79
    • 2942554068 scopus 로고    scopus 로고
    • TIGR. Unfinished Genomes
    • TIGR. Unfinished Genomes. http://www.tigr.org/tigr-scripts/ufmg/ReleaseDate.pl.
  • 80
    • 2942585838 scopus 로고    scopus 로고
    • TMHMM. TMHMM Server, v.2.0
    • TMHMM. TMHMM Server, v.2.0. http://www.cbs.dtu.dk/services/TMHMM/.
  • 81
    • 0032568549 scopus 로고    scopus 로고
    • Two amino acid substitutions convert a guanylyl cyclase, RetGC-1, into an adenylyl cyclase
    • Tucker CL, Hurley JH, Miller TR, et al. 1998. Two amino acid substitutions convert a guanylyl cyclase, RetGC-1, into an adenylyl cyclase. Proc Natl Acad Sci USA 95: 5993-5997.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 5993-5997
    • Tucker, C.L.1    Hurley, J.H.2    Miller, T.R.3
  • 82
    • 0032568168 scopus 로고    scopus 로고
    • The NB-ARC domain: A novel signalling motif shared by plant resistance gene products and regulators of cell death in animals
    • van der Biezen EA, Jones JD. 1998. The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals. Curr Biol 8: R226-227.
    • (1998) Curr. Biol. , vol.8
    • van der Biezen, E.A.1    Jones, J.D.2
  • 83
    • 0034893454 scopus 로고    scopus 로고
    • The genome of Mycobacterium leprae: A minimal mycobacterial gene set
    • REVIEWS1023
    • Vissa VD, Brennan PJ. 2001. The genome of Mycobacterium leprae: a minimal mycobacterial gene set. Genome Biol 2: REVIEWS1023.
    • (2001) Genome Biol. , vol.2
    • Vissa, V.D.1    Brennan, P.J.2
  • 84
    • 0035052702 scopus 로고    scopus 로고
    • The guanylyl cyclase family at Y2K
    • Wedel B, Garbers D. 2001. The guanylyl cyclase family at Y2K. Annu Rev Physiol 63: 215-233.
    • (2001) Annu. Rev. Physiol. , vol.63 , pp. 215-233
    • Wedel, B.1    Garbers, D.2
  • 85
    • 0021251437 scopus 로고
    • Pertussis toxin and extracytoplasmic adenylate cyclase as virulence factors of Bordetella pertussis
    • Weiss AA, Hewlett EL, Myers GA, et al. 1984. Pertussis toxin and extracytoplasmic adenylate cyclase as virulence factors of Bordetella pertussis. J Infect Dis 150: 219-222.
    • (1984) J. Infect. Dis. , vol.150 , pp. 219-222
    • Weiss, A.A.1    Hewlett, E.L.2    Myers, G.A.3
  • 86
    • 0020468156 scopus 로고
    • Inhibitory action of elevated levels of adenosine-3′: 5′-cyclic monophosphate on phagocytosis: Effects on macrophage-Trypanosoma cruzi interaction
    • Wirth JJ, Kierszenbaum F. 1982. Inhibitory action of elevated levels of adenosine-3′: 5′-cyclic monophosphate on phagocytosis: effects on macrophage-Trypanosoma cruzi interaction. J Immunol 129: 2759-2762.
    • (1982) J. Immunol. , vol.129 , pp. 2759-2762
    • Wirth, J.J.1    Kierszenbaum, F.2
  • 87
    • 0037322193 scopus 로고    scopus 로고
    • Coordinate regulation of bacterial virulence genes by a novel adenylate cyclase-dependent signaling pathway
    • Wolfgang MC, Lee VT, Gilmore ME, et al. 2003. Coordinate regulation of bacterial virulence genes by a novel adenylate cyclase-dependent signaling pathway. Dev Cell 4: 253-263.
    • (2003) Dev. Cell , vol.4 , pp. 253-263
    • Wolfgang, M.C.1    Lee, V.T.2    Gilmore, M.E.3
  • 88
    • 0032506004 scopus 로고    scopus 로고
    • ExoY, an adenylate cyclase secreted by the Pseudomonas aeruginosa type III system
    • Yahr TL, Vallis AJ, Hancock MK, et al. 1998. ExoY, an adenylate cyclase secreted by the Pseudomonas aeruginosa type III system. Proc Natl Acad Sci USA 95: 13 899-13 904.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95
    • Yahr, T.L.1    Vallis, A.J.2    Hancock, M.K.3
  • 89
    • 0030986180 scopus 로고    scopus 로고
    • The conserved asparagine and arginine are essential for catalysis of mammalian adenylyl cyclase
    • Yan SZ, Huang ZH, Shaw RS, et al. 1997. The conserved asparagine and arginine are essential for catalysis of mammalian adenylyl cyclase. J Biol Chem 272: 12 342-12 349.
    • (1997) J. Biol. Chem. , vol.272
    • Yan, S.Z.1    Huang, Z.H.2    Shaw, R.S.3
  • 90
    • 2942733563 scopus 로고    scopus 로고
    • New knowledge from old: In silico discovery of novel protein domains in Streptomyces coelicolor
    • Yeats C, Bentley S, Bateman A. 2003. New knowledge from old: in silico discovery of novel protein domains in Streptomyces coelicolor. BMC Microbiol 3: 3.
    • (2003) BMC Microbiol. , vol.3 , pp. 3
    • Yeats, C.1    Bentley, S.2    Bateman, A.3
  • 91
    • 0037062404 scopus 로고    scopus 로고
    • The biosynthetic gene cluster of the maytansinoid antitumor agent ansamitocin from Actinosynnema pretiosum
    • Yu TW, Bai L, Clade D, et al. 2002. The biosynthetic gene cluster of the maytansinoid antitumor agent ansamitocin from Actinosynnema pretiosum. Proc Natl Acad Sci USA 99: 7968-7973.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 7968-7973
    • Yu, T.W.1    Bai, L.2    Clade, D.3
  • 92
    • 0032584606 scopus 로고    scopus 로고
    • Mutations uncover a role for two magnesium ions in the catalytic mechanism of adenylyl cyclase
    • Zimmermann G, Zhou D, Taussig R. 1998. Mutations uncover a role for two magnesium ions in the catalytic mechanism of adenylyl cyclase. J Biol Chem 273: 19 650-19 655.
    • (1998) J. Biol. Chem. , vol.273
    • Zimmermann, G.1    Zhou, D.2    Taussig, R.3


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