DNA hydrolysis promoted by di- and multi-nuclear metal complexes

Coordination Chemistry Reviews

Volumn 248, Issue 1-2, 2004, Pages 147-168

  Liu, Changlin ^a   Wang, Ming ^b   Zhang, Tianle ^a   Sun, Hongzhe ^c  

^a HUAZHONG UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

^b CENTRAL CHINA NORMAL UNIVERSITY   (China)

^c UNIVERSITY OF HONG KONG   (Hong Kong)

Author keywords

Artificial nucleases; Catalytic cooperativity; Di and multi nuclear metal complexes; DNA hydrolysis; Phosphate diester bond; Structure function relationships; Type II restriction endonucleases

Indexed keywords

BENZIMIDAZOLE DERIVATIVE; COBALT COMPLEX; COPPER COMPLEX; DNA; DOUBLE STRANDED DNA; IRON COMPLEX; LANTHANIDE; LIGAND; MACROCYCLIC COMPOUND; METAL COMPLEX; PHOSPHATASE; PYRIDINE DERIVATIVE; RESTRICTION ENDONUCLEASE; ZINC COMPLEX;

BIOTECHNOLOGY; CHEMICAL STRUCTURE; COMPLEX FORMATION; CONJUGATION; DNA CLEAVAGE; ENZYME ACTIVE SITE; ENZYME ACTIVITY; HYDROLYSIS; KINETICS; OXIDATION; REVIEW; STRUCTURE ACTIVITY RELATION;

EID: 1142267465     PISSN: 00108545     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cct.2003.11.002     Document Type: Review

References (111)

1. Ott R., Krämer R. Appl. Microbiol. Biotenhnol. 52:1998;761.
2. Cowan J.A. Curr. Opin. Chem. Biol. 5:2001;634.
3. Sreedhara A., Cowan J.A. J. Biol. Inorg. Chem. 6:2001;337.
4. Franklin S.J. Curr. Opin. Chem. Biol. 5:2001;201.
5. Komiyama M., Sumaoka J. Curr. Opin. Chem. Biol. 2:1998;751.
6. Williams N.H., Takasaki B., Wall M., Chin J. Acc. Chem. Res. 32:1999;484.
7. Chin J. Curr. Opin. Chem. Biol. 1:1997;514.
8. Hegg E.L., Burstyn J.N. Coord. Chem. Rev. 173:1998;133.
9. Molenveld P., Engbersen J.F.J., Reinhoudt D.N. Chem. Soc. Rev. 29:2000;75.
10. Kimura E., Kikuta E. J. Biol. Inorg. Chem. 6:2000;139.
11. Liu C., Yu S., Xu H., Zhou J. Chinese J. Inorg. Chem. 16:2000;374.
12. Westheimer F.H. Science. 235:1987;1173.
13. Cowan J.A. Chem. Rev. 98:1998;1067.
14. Dudev T., Lim C. Chem. Rev. 103:2003;773.
15. Holtz K.M., Kanthrowitz E.R. FEBS Lett. 462:1999;7.
16. Lindqvist Y., Johansson E., Kaija H., Vihko P., Schneider G. J. Mol. Biol. 291:1999;135.
17. Desai N.A., Shankar V. FEMS Microbiol. Rev. 26:2003;457.
18. Horton N., Perona J.J. Proc. Natl. Acad. Sci. U.S.A. 97:2000;5729.
19. Lovell S., Goryshin I.Y., Reznikoff W.R., Rayment I. Nat. Struct. Biol. 9:2002;278.
20. Changela A., Perry K., Taneja B.T., Mondragon A. Curr. Opin. Chem. Biol. 13:2003;15.
21. Lahiri S.D., Zhang G., Dunaway-Mariano D., Allen K.N. Science. 299:2003;2067.
22. Kimura E. Curr. Opin. Chem. Biol. 4:2000;207.
23. Sträter N., Lipscomb W.N., Klabunde T., Krebs B. Angew. Chem. Int. Ed. Engl. 35:1996;2024.
24. Linkletter B., Chin J. Angew. Chem. Int. Ed. Engl. 34:1995;472.
25. Williams N.H., Cheung W., Chin J. J. Am. Chem. Soc. 120:1998;8079.
26. Young M.J., Chin J. J. Am. Chem. Soc. 117:1995;10577.
27. J. Sambrook, E.F. Fritsch, T. Maniatis, Molecular Cloning, A Laboratory Manual, 2nd. Edition, Cold Spring Harbor Laboratory Press, 1989, Chapter 5.
28. Kovall R.A., Matthews B.W. Curr. Opin. Chem. Biol. 3:1999;578.
29. Galburt E.C., Stoddart B.L. Biochemistry. 41:2002;13851.
30. Lukacs C.M., Kucera R., Schildkraut I., Aggarwal A.K. Nat. Struct. Biol. 7:2000;134.
31. Deibert M., Grazulis S., Sasnauskas G., Siksnys V., Huber R. Nat. Struct. Biol. 7:2000;792.
32. Viadiu H., Aggarwal A.K. Nat. Struct. Biol. 5:1998;910.
33. Xu S.Y., Schildkraut I. J. Biol. Chem. 266:1991;4425.
34. Schnaith L.M.T., Hanson R.S., Que L. Jr. Proc. Natl. Acad. Sci. USA. 91:1994;569.
35. Roelfes G., Branum M.E., Wang L., Que L. Jr., Feringa B.L. J. Am. Chem. Soc. 122:2000;11517.
36. Duboc-Toia C., Menage S., Vincent J.M., Averbuch-Pouchot M.T., Fontecave M. Inorg. Chem. 36:1997;6148.
37. Neves A., Terenzi H., Horner R., Horn A. Jr., Szpoganicz B., Sugai J. Inorg. Chem. Commun. 4:2001;388.
38. Liu C., Yu S., Li D., Liao Z., Sun X., Xu H. Inorg. Chem. 41:2002;913.
39. Lindqvist Y., Johansson E., Kaija H., Vihko P., Schneider G. J. Mol. Biol. 291:1999;135.
40. Liao Z., Xiang D., Li D., Sheng F., Mei F. Synth. React. Inorg. Met.-Org. Chem. 30:2000;683.
41. M. Wang, Z. Liao, T. Zhang, C. Liu, Manuscript in preparation.
42. Deal K.A., Park G., Shao J., Chasteen N.D., Brechbiel M.W., Planalp R.P. Inorg. Chem. 40:2001;4176.
43. D. Li, Z. Liao, Y. Wei, F. Du, M. Wang, W. Chen, W. Li, X. Mao, Dalton Trans. (2003) 2164.
44. Christianson D.W., Cox J.D. Annu. Rev. Biochem. 68:1999;33.
45. Clewley R.G., Slebocka-tilk H., Brown R.S. Inorg. Chim. Acta. 157:1989;233.
46. Chapman W.H. Jr., Breslow R. J. Am. Chem. Soc. 117:1995;5462.
47. Bashkin J.K. Curr. Opin. Chem. Biol. 3:1999;752.
48. C. Wendelstorf, S. Warzeska, E. Kovari, R. Kramer, J. Chem. Soc., Dalton Trans. (1996) 3087.
49. Bazzicalupi C., Bencini A., Bianchi A., Fusi V., Giorgi C., Paoletti P., Valtancoli B., Zanchi D. Inorg. Chem. 36:1997;2784.
50. Kaminskaia N.V., He C., Lippard S.J. Inorg. Chem. 39:2000;3365.
51. K. Yamada, Y.-I. Takahashi, H. Yamamura, S. Araki, K. Saito, M. Kawai, Chem. Commun. (2000) 1315.
52. Iranzo O., Kovalevsky A.Y., Morrow J.R., Richard J.P. J. Am. Chem. Soc. 125:2003;1988.
53. Sissi C., Rossi P., Felluga F., Formaggio F., Palumbo M., Tecilla P., Toniolo C., Scrimin P. J. Am. Chem. Soc. 123:2001;3169.
54. Fitzsimons M.P., Barton J.K. J. Am. Chem. Soc. 119:1997;3379.
55. Aka F.N., Akkaya M.S., Akkaya E.U. J. Mol. Catal A: Chem. 165:2001;291.
56. P.J.M. Birker, A.J. Schierbeek, G.C. Verschoor, J. Reedijk, Chem. Commun. (1981) 1124.
57. Yu S., Liu C., Li D., Liao Z., Xu H. Chinese J. Inorg. Chem. 18:2002;1112.
58. Kikuta E., Aoki S., Kimura E. J. Biol. Inorg. Chem. 7:2002;476.
59. Korupoju S.R., Mangayarkarsi N., Zacharias P.S., Mizuthani J., Nishihara H. Inorg. Chem. 41:2002;4099.
60. Scarso A., Scheffer U., Gobel M., Broxterman Q.B., Kaptein B., Formaggio F., Toniolo C., Scrimin P. Proc. Natl. Acad. Sci. U.S.A. 99:2002;5144.
61. Cricco J.A., Orellano E.G., Rasia R.M., Ceccarelli E.A., Vila A.J. Coord. Chem. Rev. 190-192:1999;519.
62. Gajda T., Dupre Y., Torok I., Harmer J., Schweiger A., Sander J., Kuppert D., Hegetschweiler K. Inorg. Chem. 40:2001;4918.
63. Young M.J., Chin J. J. Am. Chem. Soc. 117:1995;10577.
64. De Iuliis G.N., Lawrance G.A., Fieuw-Makaroff S. Inorg. Chem. Commun. 3:2000;307.
65. Rossi L.M., Neves A., Horner R., Terenzi H., Szpoganicz B., Sugai J. Inorg. Chim. Acta. 337:2002;366.
66. A. Sreedhara, J.A. Cowan, Chem. Commun. (1998) 17137.
67. Humphreys K.J., Karlin K.D., Rokita S.E. J. Am. Chem. Soc. 124:2002;6009.
68. Bracken K., Moss R.A., Ragunathan K.C. J. Am. Chem. Soc. 119:1997;9323.
69. Takasaski B.K., Chin J. J. Am. Chem. Soc. 117:1995;8582.
70. Breslow R., Zhang B.L. J. Am. Chem. Soc. 116:1994;7893.
71. Barnes J.C., Blyth C.S., Knowles D. Inorg. Chim. Acta. 126:1987;L3.
72. Gomez-Tagle P., Yatsimirsky A.K. Inorg. Chem. 40:2001;3786.
73. Mejia-Radillo Y., Yattsimirsky A.K. Inorg. Chem. Acta. 328:2002;241.
74. Moss R.A., McKernan B.A., Sauers R.R. Tetrahedron Letters. 43:2002;5925.
75. Ragunathan K.G., Schneider H.-J. Angew. Chem. Int. Ed. 35:1996;1219.
76. Zhu B., Zhao D.Q., Ni J.Z., Zeng Q.H., Huang B.Q., Wang Z.L. Inorg. Chem. Commun. 2:1999;351.
77. Takasaski B.K., Chin J. J. Am. Chem. Soc. 116:1994;1121.
78. Branum M.E., Tipton A.K., Zhu S., Que L. Jr. J. Am. Chem. Soc. 123:2001;1898.
79. Branum M.E., Que L. Jr. J. Biol. Inorg. Chem. 4:1999;593.
80. M. Komiyama, N. Takeda, H. Shigekawa, Chem. Commun. (1999) 1443.
81. Yun J.W., Tanase T., Lippard S.J. Inorg. Chem. 35:1996;7590.
82. R. Ren, Ph.D. Thesis, Nanjing University, 2000.
83. Ye B.-H., Williams I.D., Li X.-Y. J. Inorg. Biochem. 92:2002;128.
84. Williams N., Cheung W., Chin J. J. Am. Chem. Soc. 120:1998;8079.
85. Vance D.H., Czarnik A.W. J. Am. Chem. Soc. 115:1993;12165.
86. F. Liang, C. Wu, unpublished data.
87. Kesicki E.A., De Rosch M.A., Freeman L.H., Walton C.L., Harvey D.F., Trogler W.C. Inorg. Chem. 32:1993;5851.
88. Dos Santos O., Lajmi A.R., Canary J.W. Tetrahedron Lett. 38:1997;4383.
89. Gao J., Martell A.E., Reibenspies J. Inorg. Chim. Acta. 329:2002;122.
90. Molenveld P., Engbersen J.F.J., Reinhoudt D.N. Angew Chem. Int. Ed. 38:1999;3189.
91. Dulger S., Saglam N., Belduz A.O., Guner S., Karabocek S. BioMetals. 13:2000;261.
92. Bennett S.P., Halford S.E. Curr. Top. Cell Reg. 30:1989;57.
93. Steitz T.A., Steitz J.A. Proc. Natl. Acad. Sci. U.S.A. 90:1993;6498.
94. Sigel H. Chem. Soc. Rev. 22:1993;255.
95. R.G. Wilkins, Kinetics and mechanism of reactions of transition metal complexes, VCH: Weinheim, 1991, pp199-205.
96. Bracken K., Moss R.A., Ragunathan K.G. J. Am. Chem. Soc. 119:1997;9323.
97. N. Kimizuka, E. Watanabe, T. Kunitake, Chem. Lett. (1999) 29.
98. Komiyama M. J. Biochem. 118:1995;665.
99. Kim Y.-G., Cha J., Chandrasegaran S. Proc. Natl. Acad. Sci. U.S.A. 93:1996;1156.
100. Copeland K.D., Fitzsimons M.P., Houser R.P., Barton J.K. Biochemistry. 41:2002;343.
101. Basile L.A., Barton J.K. J. Am. Chem. Soc. 109:1987;7548.
102. Basile L.A., Raphael A.L., Barton J.K. J. Am. Chem. Soc. 109:1987;7550.
103. Kim Y., Welch J.T., Lindstrom K.M., Franklin S.J. J. Biol. Inorg. Chem. 6:2001;173.
104. Welch J.T., Kearney W.R., Franklin S.J. Proc. Natl. Acad. Sci. U.S.A. 100:2003;3725.
105. Welch J.T., Sirish M., Lindstrom K.M., Franklin S.J. Inorg. Chem. 40:2001;1982.
106. Kovacic R.T., Welch J.T., Franklin S.J. J. Am. Chem. Soc. 125:2003;6656.
107. Berg T., Simeonov A., Janda K.D. J. Combinat. Chem. 1:1999;96.
108. Acharya A.S., Roy K.B. Biochem. Biophys. Res. Commun. 287:2001;153.
109. Erskine S.G., Halford S.E. Gene. 157:1995;153.
110. Stec B., Hehir M.J., Brennan C., Nolte M., Kantrowitz E.R. J. Mol. Biol. 277:1998;647.
111. Cashikar A.G., Kumaresan R., Rao N.M. Plant Physiol. 114:1997;907.