Why zinc in zinc enzymes? From biological roles to DNA base-selective recognition

Journal of Biological Inorganic Chemistry

Volumn 5, Issue 2, 2000, Pages 139-155

  Kimura, Eiichi ^a   Kikuta, Emiko ^a  

^a HIROSHIMA UNIV SCHOOL OF MEDICINE   (Japan)

Author keywords

Antimicrobial activity; Enzyme model; Macrocyclic zinc(II) complex; Molecular recognition; TATA box; Zinc enzyme

Indexed keywords

ZINC; ZINC COMPLEX;

ANTIMICROBIAL ACTIVITY; COMPLEX FORMATION; ENZYME ACTIVITY; ENZYME STABILITY; ENZYME STRUCTURE; PRIORITY JOURNAL; PROTEIN DNA INTERACTION; SHORT SURVEY; STRUCTURE ACTIVITY RELATION;

BACTERIA (MICROORGANISMS); POSIBACTERIA;

EID: 0034059651     PISSN: 09498257     EISSN: None     Source Type: Journal    
DOI: 10.1007/s007750050359     Document Type: Short Survey

References (66)

1. Kimura E, Yamaoka M, Morioka M, KoikeT (1986) Inorg Chem 25:3883-3886
2. Kimura E, Koike T, Toriumi K (1988) Inorg Chem 27:3687-3688
3. Kimura E, Koike T, Shiota T, Iitaka Y (1990) Inorg Chem 29:4621-4629
4. Kimura E, Kurogi Y, Shionoya M, Shiro M (1991) Inorg Chem 30:4524-4530
5. Kimura E, Koike T, Shionoya M, Shiro M (1992) Chem Lett 787-790
6. Kimura E, Shiota T, Koike T, Shiro M, Kodama M (1990) J Am Chem Soc 112:5805-5811
7. Coleman JE (1986) In: Bertini I, Luchinat C, Maret W, ZeppeZamer M (eds) Zinc enzymes. Birkhuäser Boston, p 49
8. Kodama M, Kimura E (1978) J Chem Soc Dalton Trans 1081-1085
9. Woolly P (1975) Nature 258:677-682
10. Martell AE, Smith RM (1982) Critical stability constants, vol 5. Plenum, New York
11. Kimura E, Koike T (1991) Comments Inorg Chem 11:285-301
12. Kimura E (1993) Prog Inorg Chem 41:443-492
13. Kimura E, Koike T (1996) In: Comprehensive supramolecular chemistry. Pergamon, Oxford, vol 10, pp 392-444
14. Kimura E, Koike T (1996) Adv Inorg Chem 44:229-261
15. Zhang X, Eldik R, Koike T, Kimura E (1993) Inorg Chem 32:5749-5755
16. Botrè F, Gros G, Storey, BT (eds) (1991) Carbonic anhydrase. VCH, Weinheim
17. Zhang X, von Eldik R (1995) Inorg Chem 34:5606-5614
18. Sträta N, Lipscomb WN, Klabunde T, Krebs B (1996) Angew Chem Int Ed Engl 33:2024-2055
19. Kimura E, Nakamura I, Koike T, Shionoya M, Kodama Y, Ikeda T, Shiro M (1994) J Am Chem Soc 116:4764-4771
20. Kimura E, Kodama Y, Koike T, Shiro M (1995) J Am Chem Soc 117:8304-8311
21. Eklund H, Jones A, Schneider G (1986) In: Bertini I, Luchinat C, Maret W, ZeppeZamer M (eds) Zinc enzymes. Birkhäuser, Boston, p 377
22. Kimura E, Shionoya M, Hoshino A, Ikeda T, Yamada Y (1992) J Am Chem Soc 114:10134-10137
23. Eriksson AE, Kylsten PM, Jones TA, Liljas A (1988) Proteins 4:283-293
24. Koike T, Kimura E, Nakamura I, Hashimoto Y, Shiro M (1992) J Am Chem Soc 114:7338-7345
25. Koike T, Watanabe T, Aoki S, Kimura E, Shiro M (1996) J Am Chem Soc 118:12696-12703
26. Kimura E, Koike T (1998) Chem Soc Rev 27:179-184
27. Koike T, Inoue M, Kimura E, Sihro M (1996) J Am Chem Soc 118:3091-3099
28. Kimura E, Kodama Y, Koike T, Shiro M (1995) J Am Chem Soc 117:8304-8311
29. Kimura E, Gotoh T, Koike T, Shiro M (1999) J Am Chem Soc 121:1267-1274
30. Szwergold BS, Ugurbil K, Brown TR (1995) Arch Biochem Biophys 317:244-252
31. Fessner WD, Schneider A, Held H, Sinerius G, Walter C, Hixon M, Schloss JV (1996) Angew Chem Int Ed Engl 35:2219-2221
32. Hall DR, Leonald GA, Reed CD, Watt CI, Berry A, Hunter WN (1999) J Mol Biol 287:383-394
33. Kimura E, Koike T (1998) J Chem Soc Chem Commun 1495-1500
34. Hamilton AD, van Engen D (1987) J Am Chem Soc 109:5035-5036
35. Shionoya M, Kimura E, Shiro M (1993) J Am Chem Soc 115:6730-6737
36. Shionoya M, Ikeda T, Kimura E, Shiro M (1994) J Am Chem Soc 116:3848-3859
37. Koike T, Kimura E (1991) J Am Chem Soc 113:8935-8941
38. Koike T, Kajitani S, Nakamura I, Kimura E, Shiro M (1995) J Am Chem Soc 117:1210-1219
39. Kimura E, Kitamura H, Koike T (unpublished result)
40. Shionoya M, Sugiyama M, Kimura E (1994) J Chem Soc Chem Commun 1747-1748
41. Kimura E, Ikeda T, Aoki S, Shionoya M (1998) JBIC 3:259-267
42. Kikuta E, Katsube N, Kimura E (1999) JBIC 4:431-440
43. Kikuta E, Murata M, Katsube N, Koike T, Kimura E (1999) J Am Chem Soc 121:5426-5436
44. Coll M, Frederick CA, Wang AHJ, Rich A (1987) Proc Natl Acad Sci USA 84:8385-8389
45. van Dyke MW, Hertzberg RP, Dervan PB (1982) Proc Natl Acad Sci USA 79:5470-5474
46. Fox KR, Waring MJ (1984) Nucleic Acids Res 12:9271-9285
47. van Dyke MW, Dervan PB (1983) Nucleic Acids Res 11:5555-5567
48. Griffin JH, Dervan PB (1987) J Am Chem Soc 109:6840-6842
49. Woynarowski JM, Sigmund RD, Beerman TA (1989) Biochemistry 28:3850-3855
50. Wilson WD, Ratmeyer L, Zhao M, Strekowski L, Boykin D (1993) Biochemistry 32:4098-4104
51. Portugal J, Waring MJ (1988) Biochim Biophys Acta 949:158-168
52. Larsen TA, Goodsell DS, Cascio D, Grzeskowiak K, Dickerson RE (1989) J Biomol Struct Dyn 7:477-491
53. Tanious FA, Veal JM, Buczak H, Ratmeyer LS, Wilson WD (1992) Biochemistry 31:3103-3112
54. Trotta E, D'Ambrosio E, Del Grosso N, Ravagnan G, Cirilli M, Paci M (1993) J Biol Chem 268:3944-3951
55. Wilson WD, Tanious FA, Barton HJ, Jones RL, Fox KR, Wydra RL, Strekowski L (1990) Biochemistry 29:8452-8461
56. van Dyke MW, Dervan PB (1984) Science 225:1122-1127
57. Low CM, Drew HR, Waring MJ (1984) Nucleic Acids Res 12:4865-4879
58. Ughetto G, Wang AH, Quigley GJ, van der Marel GA, van Boom JH, Rich A (1985) Nucleic Acids Res 13:2305-2323
59. Bailly C, Hamy F, Waring MJ (1996) Biochemistry 35:1150-1161
60. Fox KR, Waring MJ (1987) Biochim Biophys Acta 909:145-155
61. Drew HR (1984) J Mol Biol 176:535-557
62. Bucher P (1990) J Mol Biol 212:563-578
63. Sharp P (1992) Cell 68:819-821
64. Bellorini M, Moncollin V, D'Incalci M, Mongelli N, Mantovani R (1995) Nucleic Acids Res 23:1657-1663
65. Chiang S, Welch J, Rauscher FJ III, Beerman TA (1994) Biochemistry 33:7033-7040
66. Kikuta E, Koike T, Kimura E (2000) J Inorg Biochem (in press)