Lanthanide-binding helix-turn-helix peptides: Solution structure of a designed metallonuclease

Proceedings of the National Academy of Sciences of the United States of America

Volumn 100, Issue 7, 2003, Pages 3725-3730

  Welch, Joel T ^a   Kearney, William R ^b   Franklin, Sonya J ^a  

^a E11 SSH   (United States)

^b UNIVERSITY OF IOWA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

LANTHANIDE; PEPTIDE; ESTERASE; HELIX LOOP HELIX PROTEIN; METALLOPROTEIN;

ALPHA HELIX; ARTICLE; CARBOXY TERMINAL SEQUENCE; CELL VIABILITY; CHIMERA; DNA BINDING; DNA CLEAVAGE; ENZYME STRUCTURE; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN FOLDING; PROTEIN MOTIF; PROTEIN SECONDARY STRUCTURE; TARGET CELL; AMINO ACID SEQUENCE; BINDING SITE; CHEMISTRY; CIRCULAR DICHROISM; KINETICS; METHODOLOGY; MOLECULAR GENETICS; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PROTEIN CONFORMATION; SOLUTION AND SOLUBILITY; SYNTHESIS;

AMINO ACID SEQUENCE; BINDING SITES; CIRCULAR DICHROISM; ESTERASES; HELIX-TURN-HELIX MOTIFS; KINETICS; LANTHANOID SERIES ELEMENTS; MAGNETIC RESONANCE SPECTROSCOPY; METALLOPROTEINS; MOLECULAR SEQUENCE DATA; PEPTIDES; PROTEIN CONFORMATION; SOLUTIONS;

EID: 0037386541     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0536562100     Document Type: Article

References (41)

1. Hill, R. B., Raleigh, D. P., Lombardi, A. & DeGrado, W. F. (2000) Acc. Chem. Res. 33, 745-754.
2. Lombardi, A., Summa, C. M., Geremia, S., Randaccio, L., Pavone, V. & DeGrado, W. F. (2000) Proc. Natl. Acad. Sci. USA 97, 6298-6305.
3. Matzapetakis, M., Farrer, B. T., Weng, T.-C., Hemmingsen, L., Penner-Hahn, J. E. & Pecoraro, V. L. (2002) J. Am. Chem. Soc. 124, 8042-8054.
4. Gibney, B. R., Isogai, Y., Rabanal, F., Reddy, K. S., Grosset, A. M., Moser, C. C. & Dutton, P. L. (2000) Biochemistry 39, 11041-11049.
5. Lu, Y., Berry, S. M. & Pfister, T. D. (2001) Chem. Rev. 101, 3047-3080.
6. Hellinga, H. & Richards, F. M. (1991) J. Mol. Biol. 222, 763-785.
7. Benson, D. E., Wisz, M. S. & Hellinga, H. (2000) Proc. Natl. Acad. Sci. USA 97, 6292-6297.
8. Farinas, E. & Regan, L. (1998) Protein Sci. 7, 1939-1946.
9. Wilcox, C. S., Putnam, C. D., Sastry, M., Blankenship, J., Chazin, W. J., McRee, D. E. & Goodin, D. B. (1998) Biochemistry 37, 16853-16862.
10. Merkle, D. L., Schmidt, M. H. & Berg, J. M. (1991) J. Am. Chem. Soc. 113, 5450-5451.
11. Conte, D., Narindrasorasak, S. & Sarkar, B. (1996) J. Biol. Chem. 271, 5125-5130.
12. Kim, Y., Welch, J. T., Lindstrom, K. M. & Franklin, S. J. (2001) J. Biol. Inorg. Chem. 6, 173-181.
13. Yang, W., Lee, H.-W., Hellinga, H. & Yang, J. T. (2002) Proteins Struct. Funct. Genet. 47, 344-356.
14. McColl, D. J., Honchell, C. D. & Frankel, A. D. (1999) Proc. Natl. Acad. Sci. USA 96, 9521-9526.
15. Welch, J. T., Sirish, M., Lindstrom, K. M. & Franklin, S. J. (2001) Inorg. Chem. 40, 1982-1984.
16. Efimov, A. V. (1996) FEBS Lett. 391, 167-170.
17. Kim, Y. & Franklin, S. J. (2002) Inorg. Chim. Acta 341, 107-112.
18. Sirish, M. & Franklin, S. J. (2002) J. Inorg. Biochem. 91, 253-258.
19. Chattopadhyaya, R., Meador, W. E., Means, A. R. & Quiocho, F. A. (1992) J. Mol. Biol. 228, 1177-1192.
20. Tucker-Kellogg, L., Rould, M. A., Chambers, K. A., Ades, S. E., Sauer, R. T. & Pabo, C. O. (1997) Structure (London) 5, 1047-1054.
21. Wilcox, C. S. (1991) in Frontiers in Supramolecular Organic Chemistry and Photochemistry, eds. Schneider, H.-J. & Durr, H. (VCH, Weinheim, Germany), pp. 125-139.
22. Sirish, M. & Schneider, H.-J. (1999) Chem. Commun. 907-908.
23. Wüthrich, K. (1986) NMR of Proteins and Nucleic Acids (Wiley, New York).
24. Lytle, B. L., Volkman, B. F., Westler, W. M., Heckman, M. P. & Wu, J. H. D. (2001) J. Mol. Biol. 307, 745-753.
25. Bentrop, D., Bertini, I., Cremonini, M. A., Forsén, S., Luchinat, C. & Malmendal, A. (1997) Biochemistry 36, 11605-11618.
26. Marsden, B. J., Shaw, G. S. & Sykes, B. D. (1990) Biochem. Cell Biol. 68, 587-601.
27. Procyshyn, R. M. & Reid, R. E. (1994) J. Biol. Chem. 269, 1641-1647.
28. Gariépy, J., Sykes, B. D. & Hodges, R. S. (1983) Biochemistry 22, 1765-1772.
29. Reid, R. E., Gariépy, J., Saund, A. K. & Hodges, R. S. (1981) J. Biol. Chem. 256, 2742-2751.
30. Borin, G., Ruzza, P., Rossi, M., Calderan, A., Marchiori, F. & Peggion, E. (1989) Biopolymers 28, 353-369.
31. Vázquez-Ibar, J. L., Weinglass, A. B. & Kaback, H. R. (2002) Proc. Natl. Acad. Sci. USA 99, 3487-3492.
32. Huheey, J. E., Keiter. E. A. & Keiter. R. L. (1993) Inorganic Chemistry (HarperColiins. New York).
33. Wishart, D. S., Sykes, B. D. & Richards, F. M. (1992) Biochemistry 31, 1647-1651.
34. Merutka, G., Dyson, H. J. & Wright, P. E. (1995) J. Biomol. NMR 5, 14-24.
35. Gehring, W. J., Affolter, M. & Bürglin, T. (1994) Annu. Rev. Biochem 63, 487-526.
36. Laughon, A. (1991) Biochemistry 30, 11357-11367.
37. Prochiantz, A. (2000) Curr. Opin. Cell Biol. 12, 400-406.
38. Derossi, D., Calvet, S., Trembleau, A., Brunissen, A., Chassaing, G. & Prochiantz, A. (1996) J. Biol. Chem. 271, 18188-18193.
39. Bertini, I., Luchinat, C. & Parigi, G. (2001) Solution NMR of Paramagnetic Molecules (Elsevier Science, Amsterdam).
40. DeGrado, W. F., Summa, C. M., Pavone, V., Nastri, F. & Lombardi, A. (1999) Annu. Rev. Biochem. 68, 779-819.
41. Franklin, S. J. (2001) Curr. Opin. Chem. Biol. 5, 201-208.