-
1
-
-
0033568606
-
The Escherichia coli sigma (E)-dependent extracytoplasmic stress response is controlled by the regulated proteolysis of an anti-sigma factor
-
Ades SE, Connolly LE, Alba BM, Gross CA. 1999. The Escherichia coli sigma (E)-dependent extracytoplasmic stress response is controlled by the regulated proteolysis of an anti-sigma factor. Genes Dev. 13:2449-61
-
(1999)
Genes Dev.
, vol.13
, pp. 2449-2461
-
-
Ades, S.E.1
Connolly, L.E.2
Alba, B.M.3
Gross, C.A.4
-
3
-
-
0037102509
-
DegS and YaeL participate sequentially in the cleavage of RseA to activate the sigma(E)-dependent extracytoplasmic stress response
-
Alba BM, Leeds JA, Onufryk C, Lu CZ, Gross CA. 2002. DegS and YaeL participate sequentially in the cleavage of RseA to activate the sigma(E)-dependent extracytoplasmic stress response. Genes Dev. 16:2156-68
-
(2002)
Genes Dev.
, vol.16
, pp. 2156-2168
-
-
Alba, B.M.1
Leeds, J.A.2
Onufryk, C.3
Lu, C.Z.4
Gross, C.A.5
-
4
-
-
0034202992
-
The role of sigma factors in plastid transcription
-
Allison LA. 2000. The role of sigma factors in plastid transcription. Biochimie 82:537-48
-
(2000)
Biochimie
, vol.82
, pp. 537-548
-
-
Allison, L.A.1
-
6
-
-
0034725649
-
Mutational analysis of beta′ 260-309, a sigma 70 binding site located on Escherichia coli core RNA polymerase
-
Arthur TM, Anthony LC, Burgess RR. 2000. Mutational analysis of beta′ 260-309, a sigma 70 binding site located on Escherichia coli core RNA polymerase. J. Biol. Chem. 275:23113-19
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 23113-23119
-
-
Arthur, T.M.1
Anthony, L.C.2
Burgess, R.R.3
-
8
-
-
0035951301
-
Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP
-
Barker MM, Gaal T, Gourse RL. 2001. Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP. J. Mol. Biol. 305:689-702
-
(2001)
J. Mol. Biol.
, vol.305
, pp. 689-702
-
-
Barker, M.M.1
Gaal, T.2
Gourse, R.L.3
-
9
-
-
0035951305
-
Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro
-
Barker MM, Gaal T, Josaitis CA, Gourse RL. 2001. Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro. J. Mol. Biol. 305:673-88
-
(2001)
J. Mol. Biol.
, vol.305
, pp. 673-688
-
-
Barker, M.M.1
Gaal, T.2
Josaitis, C.A.3
Gourse, R.L.4
-
10
-
-
0030965301
-
Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10' motif at promoters
-
Barne KA, Bown JA, Busby SJ, Minchin SD. 1997. Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10' motif at promoters. EMBO J. 16:4034-40
-
(1997)
EMBO J.
, vol.16
, pp. 4034-4040
-
-
Barne, K.A.1
Bown, J.A.2
Busby, S.J.3
Minchin, S.D.4
-
11
-
-
0032981092
-
The role of an alternative sigma factor in motility and pilus formation in the cyanobacterium Synechocystis sp. strain PCC6803
-
Bhaya D, Watanabe N, Ogawa T, Grossman AR. 1999. The role of an alternative sigma factor in motility and pilus formation in the cyanobacterium Synechocystis sp. strain PCC6803. Proc. Natl. Acad. Sci. USA 96:3188-93
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 3188-3193
-
-
Bhaya, D.1
Watanabe, N.2
Ogawa, T.3
Grossman, A.R.4
-
12
-
-
0033885504
-
Sigma(BldN), an extracytoplasmic function RNA polymerase sigma factor required for aerial mycelium formation in Streptomyces coelicolor A3(2)
-
Bibb MJ, Molle V, Buttner MJ. 2000. Sigma(BldN), an extracytoplasmic function RNA polymerase sigma factor required for aerial mycelium formation in Streptomyces coelicolor A3(2). J. Bacteriol. 182:4606-16
-
(2000)
J. Bacteriol.
, vol.182
, pp. 4606-4616
-
-
Bibb, M.J.1
Molle, V.2
Buttner, M.J.3
-
13
-
-
0036840677
-
Role of the RNA polymerase sigma subunit in transcription initiation
-
Borukhov S, Severinov K. 2002. Role of the RNA polymerase sigma subunit in transcription initiation. Res. Microbiol. 153:557-62
-
(2002)
Res. Microbiol.
, vol.153
, pp. 557-562
-
-
Borukhov, S.1
Severinov, K.2
-
14
-
-
0026526439
-
Identification of multiple RNA polymerase sigma factor homologs in the cyanobacterium Anabaena sp. strain PCC 7120: Cloning, expression, and inactivation of the sigB and sigC genes
-
Brahamsha B, Haselkorn R. 1992. Identification of multiple RNA polymerase sigma factor homologs in the cyanobacterium Anabaena sp. strain PCC 7120: cloning, expression, and inactivation of the sigB and sigC genes. J. Bacteriol. 174:7273-82
-
(1992)
J. Bacteriol.
, vol.174
, pp. 7273-7282
-
-
Brahamsha, B.1
Haselkorn, R.2
-
15
-
-
0030925485
-
Surface signaling: Novel transcription initiation mechanism starting from the cell surface
-
Braun V. 1997. Surface signaling: novel transcription initiation mechanism starting from the cell surface. Arch. Microbiol. 167:325-31
-
(1997)
Arch. Microbiol.
, vol.167
, pp. 325-331
-
-
Braun, V.1
-
16
-
-
0030671325
-
SigX of Bacillus subtilis replaces the ECF sigma factor FecI of Escherichia coli and is inhibited by RsiX
-
Brutsche S, Braun V. 1997. SigX of Bacillus subtilis replaces the ECF sigma factor FecI of Escherichia coli and is inhibited by RsiX. Mol. Gen. Genet. 256:416-25
-
(1997)
Mol. Gen. Genet.
, vol.256
, pp. 416-425
-
-
Brutsche, S.1
Braun, V.2
-
17
-
-
0033912262
-
The bacterial enhancer-dependent sigma(54) (sigma(N)) transcription factor
-
Buck M, Gallegos MT, Studholme DJ, Guo Y, Gralla JD. 2000. The bacterial enhancer-dependent sigma(54) (sigma(N)) transcription factor. J. Bacteriol. 182: 4129-36
-
(2000)
J. Bacteriol.
, vol.182
, pp. 4129-4136
-
-
Buck, M.1
Gallegos, M.T.2
Studholme, D.J.3
Guo, Y.4
Gralla, J.D.5
-
18
-
-
0026634129
-
Construction and characterization of Streptomyces coelicolor A3(2) mutants that are multiply deficient in the non-essential hrd-encoded RNA polymerase sigma factors
-
Buttner MJ, Lewis CG. 1992. Construction and characterization of Streptomyces coelicolor A3(2) mutants that are multiply deficient in the non-essential hrd-encoded RNA polymerase sigma factors. J. Bacteriol. 174:5165-67
-
(1992)
J. Bacteriol.
, vol.174
, pp. 5165-5167
-
-
Buttner, M.J.1
Lewis, C.G.2
-
19
-
-
0024297563
-
At least three different RNA polymerase holoenzymes direct transcription of the agarase gene (dagA) of Streptomyces coelicolor A3(2)
-
Buttner MJ, Smith AM, Bibb MJ. 1988. At least three different RNA polymerase holoenzymes direct transcription of the agarase gene (dagA) of Streptomyces coelicolor A3(2). Cell 52:599-607
-
(1988)
Cell
, vol.52
, pp. 599-607
-
-
Buttner, M.J.1
Smith, A.M.2
Bibb, M.J.3
-
20
-
-
0033083036
-
Core RNA polymerase from E. coli induces a major change in the domain arrangement of the sigma 70 subunit
-
Callaci S, Heyduk E, Heyduk T. 1999. Core RNA polymerase from E. coli induces a major change in the domain arrangement of the sigma 70 subunit. Mol. Cell 3:229-38
-
(1999)
Mol. Cell
, vol.3
, pp. 229-238
-
-
Callaci, S.1
Heyduk, E.2
Heyduk, T.3
-
21
-
-
0037155726
-
Crystal structure of the Bacillus stearothermophilus anti-sigma factor SpoIIAB with the sporulation sigma factor sigmaF
-
Campbell EA, Masuda S, Sun JL, Muzzin O, Olson CA, et al. 2002. Crystal structure of the Bacillus stearothermophilus anti-sigma factor SpoIIAB with the sporulation sigma factor sigmaF. Cell 108: 795-807
-
(2002)
Cell
, vol.108
, pp. 795-807
-
-
Campbell, E.A.1
Masuda, S.2
Sun, J.L.3
Muzzin, O.4
Olson, C.A.5
-
22
-
-
0036203066
-
Structure of the bacterial RNA polymerase promoter specificity sigma subunit
-
Campbell EA, Muzzin O, Chlenov M, Sun JL, Olson CA, et al. 2002. Structure of the bacterial RNA polymerase promoter specificity sigma subunit. Mol. Cell 9:527-39
-
(2002)
Mol. Cell
, vol.9
, pp. 527-539
-
-
Campbell, E.A.1
Muzzin, O.2
Chlenov, M.3
Sun, J.L.4
Olson, C.A.5
-
23
-
-
0012837562
-
Crystal structure of Escherichia coli σE with the cytoplasmic domain of the anti-sigma RseA
-
Campbell EA, Tupy JL, Gruber TM, Wang S, Sharp MM, et al. 2003. Crystal structure of Escherichia coli σE with the cytoplasmic domain of the anti-sigma RseA. Mol. Cell 11:1067-78
-
(2003)
Mol. Cell
, vol.11
, pp. 1067-1078
-
-
Campbell, E.A.1
Tupy, J.L.2
Gruber, T.M.3
Wang, S.4
Sharp, M.M.5
-
24
-
-
0031659704
-
Mutation of an alternative sigma factor in the cyanobacterium Nostoc punctiforme results in increased infection of its symbiotic plant partner, Anthoceros punctatus
-
Campbell EL, Brahamsha B, Meeks JC. 1998. Mutation of an alternative sigma factor in the cyanobacterium Nostoc punctiforme results in increased infection of its symbiotic plant partner, Anthoceros punctatus. J. Bacteriol. 180:4938-41
-
(1998)
J. Bacteriol.
, vol.180
, pp. 4938-4941
-
-
Campbell, E.L.1
Brahamsha, B.2
Meeks, J.C.3
-
25
-
-
0035087998
-
FosB, a cysteine-dependent fosfomycin resistance protein under the control of sigma(W), an extracytoplasmic-function sigma factor in Bacillus subtilis
-
Cao M, Bernat BA, Wang Z, Armstrong RN, Helmann JD. 2001. FosB, a cysteine-dependent fosfomycin resistance protein under the control of sigma(W), an extracytoplasmic-function sigma factor in Bacillus subtilis. J. Bacteriol. 183:2380-83
-
(2001)
J. Bacteriol.
, vol.183
, pp. 2380-2383
-
-
Cao, M.1
Bernat, B.A.2
Wang, Z.3
Armstrong, R.N.4
Helmann, J.D.5
-
26
-
-
0036307635
-
Defining the Bacillus ubtilis sigma(W) regulon: A comparative analysis of promoter consensus search, run-off transcription/macroarray analysis (ROMA), and transcriptional profiling approaches
-
Cao M, Kobel PA, Morshedi MM, Wu MF, Paddon C, Helmann JD. 2002. Defining the Bacillus ubtilis sigma(W) regulon: a comparative analysis of promoter consensus search, run-off transcription/macroarray analysis (ROMA), and transcriptional profiling approaches. J. Mol. Biol. 316:443-57
-
(2002)
J. Mol. Biol.
, vol.316
, pp. 443-457
-
-
Cao, M.1
Kobel, P.A.2
Morshedi, M.M.3
Wu, M.F.4
Paddon, C.5
Helmann, J.D.6
-
27
-
-
0036046191
-
Antibiotics that inhibit cell wall biosynthesis induce expression of the Bacillus subtilis sigma(W) and sigma(M) regulons
-
Cao M, Wang T, Ye R, Helmann JD. 2002. Antibiotics that inhibit cell wall biosynthesis induce expression of the Bacillus subtilis sigma(W) and sigma(M) regulons. Mol. Microbiol. 45:1267-76
-
(2002)
Mol. Microbiol.
, vol.45
, pp. 1267-1276
-
-
Cao, M.1
Wang, T.2
Ye, R.3
Helmann, J.D.4
-
28
-
-
0031466505
-
Expression of two alternative sigma factors of Synechococcus sp. strain PCC 7002 is modulated by carbon and nitrogen stress
-
Caslake LF, Gruber TM, Bryant DA. 1997. Expression of two alternative sigma factors of Synechococcus sp. strain PCC 7002 is modulated by carbon and nitrogen stress. Microbiology 143:3807-18
-
(1997)
Microbiology
, vol.143
, pp. 3807-3818
-
-
Caslake, L.F.1
Gruber, T.M.2
Bryant, D.A.3
-
29
-
-
0035195997
-
Regulation of sporulation in Streptomyces coelicolor A3(2): A checkpoint multiplex?
-
Chater KF. 2001. Regulation of sporulation in Streptomyces coelicolor A3(2): a checkpoint multiplex? Curr. Opin. Microbiol. 4:667-73
-
(2001)
Curr. Opin. Microbiol.
, vol.4
, pp. 667-673
-
-
Chater, K.F.1
-
30
-
-
0024415094
-
The developmental fate of S. coelicolor hyphae depends upon a gene product homologous with the motility sigma factor of B. subtilis
-
Chater KF, Bruton CJ, Plaskitt KA, Buttner MJ, Mendez C, Helmann JD. 1989. The developmental fate of S. coelicolor hyphae depends upon a gene product homologous with the motility sigma factor of B. subtilis. Cell 59:133-43
-
(1989)
Cell
, vol.59
, pp. 133-143
-
-
Chater, K.F.1
Bruton, C.J.2
Plaskitt, K.A.3
Buttner, M.J.4
Mendez, C.5
Helmann, J.D.6
-
31
-
-
0034444676
-
Coupling of flagellar gene expression to flagellar assembly in Salmonella enterica serovar Typhimurium and Escherichia coli
-
Chilcott GS, Hughes KT. 2000. Coupling of flagellar gene expression to flagellar assembly in Salmonella enterica serovar Typhimurium and Escherichia coli. Microbiol. Mol. Biol. Rev. 64:694-708
-
(2000)
Microbiol. Mol. Biol. Rev.
, vol.64
, pp. 694-708
-
-
Chilcott, G.S.1
Hughes, K.T.2
-
32
-
-
0035723427
-
SigB, an RNA polymerase sigma factor required for osmoprotection and proper differentiation of Streptomyces coelicolor
-
Cho YH, Lee EJ, Ahn BE, Roe JH. 2001. SigB, an RNA polymerase sigma factor required for osmoprotection and proper differentiation of Streptomyces coelicolor. Mol. Microbiol. 42:205-14
-
(2001)
Mol. Microbiol.
, vol.42
, pp. 205-214
-
-
Cho, Y.H.1
Lee, E.J.2
Ahn, B.E.3
Roe, J.H.4
-
33
-
-
0036009245
-
The interaction between sigmaS, the stationary phase sigma factor, and the core enzyme of Escherichia coli RNA polymerase
-
Colland F, Fujita N, Ishihama A, Kolb A. 2002. The interaction between sigmaS, the stationary phase sigma factor, and the core enzyme of Escherichia coli RNA polymerase. Genes Cells 7:233-47
-
(2002)
Genes Cells
, vol.7
, pp. 233-247
-
-
Colland, F.1
Fujita, N.2
Ishihama, A.3
Kolb, A.4
-
34
-
-
0031738436
-
Plastid evolution: Origins, diversity, trends
-
Douglas SE. 1998. Plastid evolution: origins, diversity, trends. Curr. Opin. Genet. Dev. 8:655-61
-
(1998)
Curr. Opin. Genet. Dev.
, vol.8
, pp. 655-661
-
-
Douglas, S.E.1
-
35
-
-
0035339498
-
Linking nutritional status to gene activation and development
-
Dvorkin J, Losick R. 2001. Linking nutritional status to gene activation and development. Genes Dev. 15:1051-54
-
(2001)
Genes Dev.
, vol.15
, pp. 1051-1054
-
-
Dvorkin, J.1
Losick, R.2
-
36
-
-
0035044086
-
BldD is a direct regulator of key developmental genes in Streptomyces coelicolor A3(2)
-
Elliot MA, Bibb MJ, Buttner MJ, Leskiw BK. 2001. BldD is a direct regulator of key developmental genes in Streptomyces coelicolor A3(2). Mol. Microbiol. 40: 257-69
-
(2001)
Mol. Microbiol.
, vol.40
, pp. 257-269
-
-
Elliot, M.A.1
Bibb, M.J.2
Buttner, M.J.3
Leskiw, B.K.4
-
37
-
-
0000122573
-
PHYLIP-Phylogeny Inference Package (version 3.2)
-
Felsenstein J. 1989. PHYLIP-Phylogeny Inference Package (version 3.2). Cladistics 5:164-66
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
38
-
-
0035172958
-
Promoter recognition and discrimination by EσS RNA polymerase
-
Gaal T, Ross W, Estrem ST, Nguyen LH, Burgess RR, Gourse RL. 2001. Promoter recognition and discrimination by EσS RNA polymerase. Mol. Microbiol. 42:939-54
-
(2001)
Mol. Microbiol.
, vol.42
, pp. 939-954
-
-
Gaal, T.1
Ross, W.2
Estrem, S.T.3
Nguyen, L.H.4
Burgess, R.R.5
Gourse, R.L.6
-
39
-
-
0034816770
-
RNA polymerase sigma factor that blocks morphological differentiation by Streptomyces coelicolor
-
Gehring AM, Yoo NJ, Losick R. 2001. RNA polymerase sigma factor that blocks morphological differentiation by Streptomyces coelicolor. J. Bacteriol. 183:5991-96
-
(2001)
J. Bacteriol.
, vol.183
, pp. 5991-5996
-
-
Gehring, A.M.1
Yoo, N.J.2
Losick, R.3
-
40
-
-
0027139270
-
Synthesis of the stationary-phase sigma factor sigma s is positively regulated by ppGpp
-
Gentry DR, Hernandez VJ, Nguyen LH, Jensen DB, Cashel M. 1993. Synthesis of the stationary-phase sigma factor sigma s is positively regulated by ppGpp. J. Bacteriol. 175:7982-89
-
(1993)
J. Bacteriol.
, vol.175
, pp. 7982-7989
-
-
Gentry, D.R.1
Hernandez, V.J.2
Nguyen, L.H.3
Jensen, D.B.4
Cashel, M.5
-
42
-
-
0031602973
-
Transcription in chloroplasts and mitochondria: A tale of two polymerases
-
Gray MW, Lang BF. 1998. Transcription in chloroplasts and mitochondria: a tale of two polymerases. Trends Microbiol. 6:1-3
-
(1998)
Trends Microbiol.
, vol.6
, pp. 1-3
-
-
Gray, M.W.1
Lang, B.F.2
-
43
-
-
0021014246
-
Overexpression and purification of the sigma subunit of Escherichia coli RNA polymerase
-
Gribskov M, Burgess RR. 1983. Overexpression and purification of the sigma subunit of Escherichia coli RNA polymerase. Gene 26:109-18
-
(1983)
Gene
, vol.26
, pp. 109-118
-
-
Gribskov, M.1
Burgess, R.R.2
-
44
-
-
0032459427
-
The functional and regulatory roles of sigma factors in transcription
-
Gross CA, Chan C, Dombroski A, Gruber T, Sharp M, et al. 1998. The functional and regulatory roles of sigma factors in transcription. Cold Spring Harbor Symp. Quant. Biol. 63:141-55
-
(1998)
Cold Spring Harbor Symp. Quant. Biol.
, vol.63
, pp. 141-155
-
-
Gross, C.A.1
Chan, C.2
Dombroski, A.3
Gruber, T.4
Sharp, M.5
-
45
-
-
0031908851
-
Characterization of the alternative sigma-factors SigD and SigE in Synechococcus sp. strain PCC 7002. SigE is implicated in transcription of post-exponential-phase-specific genes
-
Gruber TM, Bryant DA. 1998. Characterization of the alternative sigma-factors SigD and SigE in Synechococcus sp. strain PCC 7002. SigE is implicated in transcription of post-exponential-phase-specific genes. Arch. Microbiol. 169:211-19
-
(1998)
Arch. Microbiol.
, vol.169
, pp. 211-219
-
-
Gruber, T.M.1
Bryant, D.A.2
-
46
-
-
17944375388
-
Binding of the initiation factor σ70 to core RNA polymerase is a multi-step process
-
Gruber TM, Markov D, Sharp MM, Young BA, Lu CZ, et al. 2001. Binding of the initiation factor σ70 to core RNA polymerase is a multi-step process. Mol. Cell 8:21-31
-
(2001)
Mol. Cell
, vol.8
, pp. 21-31
-
-
Gruber, T.M.1
Markov, D.2
Sharp, M.M.3
Young, B.A.4
Lu, C.Z.5
-
47
-
-
0027176391
-
Complete sequence of Euglena gracilis chloroplast DNA
-
Hallick RB, Hong L, Drager RG, Favreau MR, Monfort A, et al. 1993. Complete sequence of Euglena gracilis chloroplast DNA. Nucleic Acids Res. 21:3537-44
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 3537-3544
-
-
Hallick, R.B.1
Hong, L.2
Drager, R.G.3
Favreau, M.R.4
Monfort, A.5
-
48
-
-
0034987011
-
General stress response of Bacillus subtilis and other bacteria
-
Hecker M, Volker U. 2001. General stress response of Bacillus subtilis and other bacteria. Adv. Microbiol. Physiol. 44:35-91
-
(2001)
Adv. Microbiol. Physiol.
, vol.44
, pp. 35-91
-
-
Hecker, M.1
Volker, U.2
-
49
-
-
0035985580
-
The extracytoplasmic function (ECF) sigma factors
-
Helmann JD. 2002. The extracytoplasmic function (ECF) sigma factors. Adv. Microbiol. Physiol. 46:47-110
-
(2002)
Adv. Microbiol. Physiol.
, vol.46
, pp. 47-110
-
-
Helmann, J.D.1
-
50
-
-
0036714331
-
Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase
-
Hengge-Aronis R. 2002. Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase. Microbiol. Mol. Biol. Rev. 66:373-95
-
(2002)
Microbiol. Mol. Biol. Rev.
, vol.66
, pp. 373-395
-
-
Hengge-Aronis, R.1
-
51
-
-
0036899077
-
Stationary phase gene regulation: What makes an Escherichia coli promoter sigma(S)-selective?
-
Hengge-Aronis R. 2002. Stationary phase gene regulation: What makes an Escherichia coli promoter sigma(S)-selective? Curr. Opin. Microbiol. 5:591-95
-
(2002)
Curr. Opin. Microbiol.
, vol.5
, pp. 591-595
-
-
Hengge-Aronis, R.1
-
52
-
-
0028985616
-
Degradation of sigma 32, the heat shock regulator in Escherichia coli, is governed by HflB
-
Herman C, Thevenet D, D'Ari R, Bouloc P. 1995. Degradation of sigma 32, the heat shock regulator in Escherichia coli, is governed by HflB. Proc. Natl. Acad. Sci. USA 92:3516-20
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 3516-3520
-
-
Herman, C.1
Thevenet, D.2
D'Ari, R.3
Bouloc, P.4
-
53
-
-
0032903448
-
Organellar RNA polymerases of higher plants
-
Hess WR, Borner T. 1999. Organellar RNA polymerases of higher plants. Int. Rev. Cytol. 190:1-59
-
(1999)
Int. Rev. Cytol.
, vol.190
, pp. 1-59
-
-
Hess, W.R.1
Borner, T.2
-
54
-
-
0036288578
-
Open season on RNA polymerase
-
Hsu LM. 2002. Open season on RNA polymerase. Nat. Struct. Biol. 9:502-4
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 502-504
-
-
Hsu, L.M.1
-
55
-
-
0032952070
-
Identification of target promoters for the Bacillus ubtilis extracytoplasmic function sigma factor, sigma W
-
Huang X, Gaballa A, Cao M, Helmann JD. 1999. Identification of target promoters for the Bacillus ubtilis extracytoplasmic function sigma factor, sigma W. Mol. Microbiol. 31:361-71
-
(1999)
Mol. Microbiol.
, vol.31
, pp. 361-371
-
-
Huang, X.1
Gaballa, A.2
Cao, M.3
Helmann, J.D.4
-
56
-
-
0032577384
-
Identification of target promoters for the Bacillus subtilis sigma X factor using a consensus-directed search
-
Huang X, Helmann JD. 1998. Identification of target promoters for the Bacillus subtilis sigma X factor using a consensus-directed search. J. Mol. Biol. 279:165-73
-
(1998)
J. Mol. Biol.
, vol.279
, pp. 165-173
-
-
Huang, X.1
Helmann, J.D.2
-
57
-
-
0033709251
-
Stress responses of Synechocystis sp. strain PCC 6803 mutants impaired in genes encoding putative alternative sigma factors
-
Huckauf J, Nomura C, Forchhammer K, Hagemann M. 2000. Stress responses of Synechocystis sp. strain PCC 6803 mutants impaired in genes encoding putative alternative sigma factors. Microbiology 146:2877-89
-
(2000)
Microbiology
, vol.146
, pp. 2877-2889
-
-
Huckauf, J.1
Nomura, C.2
Forchhammer, K.3
Hagemann, M.4
-
58
-
-
0001728519
-
The transcriptional apparatus of chloroplasts
-
Igloi GL, Koessel H. 1992. The transcriptional apparatus of chloroplasts. Crit. Rev. Plant Sci. 10:525-58
-
(1992)
Crit. Rev. Plant Sci.
, vol.10
, pp. 525-558
-
-
Igloi, G.L.1
Koessel, H.2
-
59
-
-
0033765113
-
Functional modulation of Escherichia coli RNA polymerase
-
Ishihama A. 2000. Functional modulation of Escherichia coli RNA polymerase. Annu. Rev. Microbiol. 54:499-518
-
(2000)
Annu. Rev. Microbiol.
, vol.54
, pp. 499-518
-
-
Ishihama, A.1
-
60
-
-
0031449065
-
Leaf-specifically expressed genes for polypeptides destined for chloroplasts with domains of sigma70 factors of bacterial RNA polymerases in Arabidopsis thaliana
-
Isono K, Shimizu M, Yoshimoto K, Niwa Y, Satoh K, et al. 1997. Leaf-specifically expressed genes for polypeptides destined for chloroplasts with domains of sigma70 factors of bacterial RNA polymerases in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 94:14948-53
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 14948-14953
-
-
Isono, K.1
Shimizu, M.2
Yoshimoto, K.3
Niwa, Y.4
Satoh, K.5
-
61
-
-
0035050041
-
Mapping of the Rsd contact site on the sigma 70 subunit of Escherichia coli RNA polymerase
-
Jishage M, Dasgupta D, Ishihama A. 2001. Mapping of the Rsd contact site on the sigma 70 subunit of Escherichia coli RNA polymerase. J. Bacteriol. 183:2952-56
-
(2001)
J. Bacteriol.
, vol.183
, pp. 2952-2956
-
-
Jishage, M.1
Dasgupta, D.2
Ishihama, A.3
-
63
-
-
0032574843
-
A stationary phase protein in Escherichia coli with binding activity to the major sigma subunit of RNA polymerase
-
Jishage M, Ishihama A. 1998. A stationary phase protein in Escherichia coli with binding activity to the major sigma subunit of RNA polymerase. Proc. Natl. Acad. Sci. USA 95:4953-58
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 4953-4958
-
-
Jishage, M.1
Ishihama, A.2
-
64
-
-
0032980156
-
Transcriptional organization and in vivo role of the Escherichia coli rsd gene, encoding the regulator of RNA polymerase sigma D
-
Jishage M, Ishihama A. 1999. Transcriptional organization and in vivo role of the Escherichia coli rsd gene, encoding the regulator of RNA polymerase sigma D. J. Bacteriol. 181:3768-76
-
(1999)
J. Bacteriol.
, vol.181
, pp. 3768-3776
-
-
Jishage, M.1
Ishihama, A.2
-
65
-
-
0029810991
-
Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: Intracellular levels of four species of sigma subunit under various growth conditions
-
Jishage M, Iwata A, Ueda S, Ishihama A. 1996. Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of four species of sigma subunit under various growth conditions. J. Bacteriol. 178:5447-51
-
(1996)
J. Bacteriol.
, vol.178
, pp. 5447-5451
-
-
Jishage, M.1
Iwata, A.2
Ueda, S.3
Ishihama, A.4
-
66
-
-
0037093379
-
Regulation of sigma factor competition by the alarmone ppGpp
-
Jishage M, Kvint K, Shingler V, Nystrom T. 2002. Regulation of sigma factor competition by the alarmone ppGpp. Genes Dev. 16:1260-70
-
(2002)
Genes Dev.
, vol.16
, pp. 1260-1270
-
-
Jishage, M.1
Kvint, K.2
Shingler, V.3
Nystrom, T.4
-
67
-
-
0033180518
-
Plastidic RNA polymerase sigma factors in Arabidopsis
-
Kanamaru K, Fujiwara M, Seki M, Katagiri T, Nakamura M, et al. 1999. Plastidic RNA polymerase sigma factors in Arabidopsis. Plant Cell Physiol. 40:832-42
-
(1999)
Plant Cell Physiol.
, vol.40
, pp. 832-842
-
-
Kanamaru, K.1
Fujiwara, M.2
Seki, M.3
Katagiri, T.4
Nakamura, M.5
-
68
-
-
0033517138
-
RsrA, an anti-sigma factor regulated by redox change
-
Kang JG, Paget MS, Seok YJ, Hahn MY, Bae JB, et al. 1999. RsrA, an anti-sigma factor regulated by redox change. EMBO J. 18:4292-98
-
(1999)
EMBO J.
, vol.18
, pp. 4292-4298
-
-
Kang, J.G.1
Paget, M.S.2
Seok, Y.J.3
Hahn, M.Y.4
Bae, J.B.5
-
69
-
-
0032242941
-
Initiation of aerial mycelium formation in Streptomyces
-
Kelemen GH, Buttner MJ. 1998. Initiation of aerial mycelium formation in Streptomyces. Curr. Opin. Microbiol. 1:656-62
-
(1998)
Curr. Opin. Microbiol.
, vol.1
, pp. 656-662
-
-
Kelemen, G.H.1
Buttner, M.J.2
-
70
-
-
0034749530
-
Identification and inactivation of three group 2 sigma factor genes in Anabaena sp. strain PCC 7120
-
Khudyakov IY, Golden JW. 2001. Identification and inactivation of three group 2 sigma factor genes in Anabaena sp. strain PCC 7120. J. Bacteriol. 183:6667-75
-
(2001)
J. Bacteriol.
, vol.183
, pp. 6667-6675
-
-
Khudyakov, I.Y.1
Golden, J.W.2
-
71
-
-
0033005866
-
A new gene, sigG, encoding a putative alternative sigma factor of Streptomyces coelicolor A3(2)
-
Kormanec J, Homerova D, Barak I, Sevcikova B. 1999. A new gene, sigG, encoding a putative alternative sigma factor of Streptomyces coelicolor A3(2). FEMS Microbiol. Lett. 172:153-58
-
(1999)
FEMS Microbiol. Lett.
, vol.172
, pp. 153-158
-
-
Kormanec, J.1
Homerova, D.2
Barak, I.3
Sevcikova, B.4
-
72
-
-
0342626726
-
Identification and transcriptional characterization of the gene encoding the stress-response sigma factor sigma(H) in Streptomyces coelicolor A3(2)
-
Kormanec J, Sevcikova B, Halgasova N, Knirschova R, Rezuchova B. 2000. Identification and transcriptional characterization of the gene encoding the stress-response sigma factor sigma(H) in Streptomyces coelicolor A3(2). FEMS Microbiol. Lett. 189:31-38
-
(2000)
FEMS Microbiol. Lett.
, vol.189
, pp. 31-38
-
-
Kormanec, J.1
Sevcikova, B.2
Halgasova, N.3
Knirschova, R.4
Rezuchova, B.5
-
73
-
-
0034725870
-
A structural model of transcription elongation
-
Korzheva N, Mustaev A, Kozlov M, Malhotra A, Nikiforov V, et al. 2000. A structural model of transcription elongation. Science 289:619-25
-
(2000)
Science
, vol.289
, pp. 619-625
-
-
Korzheva, N.1
Mustaev, A.2
Kozlov, M.3
Malhotra, A.4
Nikiforov, V.5
-
74
-
-
0033659766
-
Regulation of sigma factor activity during Bacillus subtilis development
-
Kroos L, Yu YT. 2000. Regulation of sigma factor activity during Bacillus subtilis development. Curr. Opin. Microbiol. 3:553-60
-
(2000)
Curr. Opin. Microbiol.
, vol.3
, pp. 553-560
-
-
Kroos, L.1
Yu, Y.T.2
-
75
-
-
0036469062
-
A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition
-
Kuznedelov K, Minakhin L, Niedzielav-Majka A, Dove SL, Rogulja D, et al. 2002. A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition. Science 295:855-57
-
(2002)
Science
, vol.295
, pp. 855-857
-
-
Kuznedelov, K.1
Minakhin, L.2
Niedzielav-Majka, A.3
Dove, S.L.4
Rogulja, D.5
-
76
-
-
0013353902
-
Sporulation-specific sigma factor sigma 29 of Bacillus subtilis is synthesized from a precursor protein, P31
-
LaBell TL, Trempy JE, Haldenwang WG. 1987. Sporulation-specific sigma factor sigma 29 of Bacillus subtilis is synthesized from a precursor protein, P31. Proc. Natl. Acad. Sci. USA 84:1784-88
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 1784-1788
-
-
LaBell, T.L.1
Trempy, J.E.2
Haldenwang, W.G.3
-
77
-
-
0033941145
-
Complementary expression of two plastid-localized sigma-like factors in maize
-
Lahiri SD, Allison LA. 2000. Complementary expression of two plastid-localized sigma-like factors in maize. Plant Physiol. 123:883-94
-
(2000)
Plant Physiol.
, vol.123
, pp. 883-894
-
-
Lahiri, S.D.1
Allison, L.A.2
-
78
-
-
0031007907
-
An ancestral mitochondrial DNA resembling a eubacterial genome in miniature
-
Lang BF, Burger G, O'Kelly CJ, Cedergren R, Golding GB, et al. 1997. An ancestral mitochondrial DNA resembling a eubacterial genome in miniature. Nature 387:493-97
-
(1997)
Nature
, vol.387
, pp. 493-497
-
-
Lang, B.F.1
Burger, G.2
O'Kelly, C.J.3
Cedergren, R.4
Golding, G.B.5
-
79
-
-
0036407638
-
Identification and structure of the anti-sigma factor-binding domain of the disulphide-stress regulated sigma factor sigma(R) from Streptomyces coelicolor
-
Li W, Stevenson C, Burton N, Jakimowicz P, Paget M, et al. 2002. Identification and structure of the anti-sigma factor-binding domain of the disulphide-stress regulated sigma factor sigma(R) from Streptomyces coelicolor. J. Mol. Biol. 323:225-36
-
(2002)
J. Mol. Biol.
, vol.323
, pp. 225-236
-
-
Li, W.1
Stevenson, C.2
Burton, N.3
Jakimowicz, P.4
Paget, M.5
-
80
-
-
0029042379
-
Circadian orchestration of gene expression in cyanobacteria
-
Liu Y, Tsinoremas NF, Johnson CH, Lebedeva NV, Golden SS, et al. 1995. Circadian orchestration of gene expression in cyanobacteria. Genes Dev. 9:1469-78
-
(1995)
Genes Dev.
, vol.9
, pp. 1469-1478
-
-
Liu, Y.1
Tsinoremas, N.F.2
Johnson, C.H.3
Lebedeva, N.V.4
Golden, S.S.5
-
81
-
-
0026612797
-
70 family: Sequence conservation and evolutionary relationships
-
70 family: sequence conservation and evolutionary relationships. J. Bacteriol. 174:3843-49
-
(1992)
J. Bacteriol.
, vol.174
, pp. 3843-3849
-
-
Lonetto, M.1
Gribskov, M.2
Gross, C.A.3
-
82
-
-
0028018104
-
Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase σ factors involved in the regulation of extracytoplasmic functions
-
Lonetto MA, Brown KL, Rudd KE, Buttner MJ. 1994. Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase σ factors involved in the regulation of extracytoplasmic functions. Proc. Natl Acad. Sci. USA 91:7573-77
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 7573-7577
-
-
Lonetto, M.A.1
Brown, K.L.2
Rudd, K.E.3
Buttner, M.J.4
-
83
-
-
0018780589
-
Purification and properties of the sigma subunit of Escherichia coli DNA-dependent RNA polymerase
-
Lowe PA, Hager DA, Burgess RR. 1979. Purification and properties of the sigma subunit of Escherichia coli DNA-dependent RNA polymerase. Biochemistry 18:1344-52
-
(1979)
Biochemistry
, vol.18
, pp. 1344-1352
-
-
Lowe, P.A.1
Hager, D.A.2
Burgess, R.R.3
-
84
-
-
0034666279
-
Competition among seven Escherichia coli sigma subunits: Relative binding affinities to the core RNA polymerase
-
Maeda H, Fujita N, Ishihama A. 2000. Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase. Nucleic Acids Res. 28:3497-503
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 3497-3503
-
-
Maeda, H.1
Fujita, N.2
Ishihama, A.3
-
85
-
-
0030271890
-
Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase
-
Malhotra A, Severinova E, Darst SA. 1996. Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase. Cell 87:127-36
-
(1996)
Cell
, vol.87
, pp. 127-136
-
-
Malhotra, A.1
Severinova, E.2
Darst, S.A.3
-
86
-
-
0036065206
-
Role of the extracytoplasmic-function sigma factor sigma(H) in Mycobacterium tuberculosis global gene expression
-
Manganelli R, Voskuil MI, Schoolnik GK, Dubnau E, Gomez M, Smith I. 2002. Role of the extracytoplasmic-function sigma factor sigma(H) in Mycobacterium tuberculosis global gene expression. Mol. Microbiol. 45:365-74
-
(2002)
Mol. Microbiol.
, vol.45
, pp. 365-374
-
-
Manganelli, R.1
Voskuil, M.I.2
Schoolnik, G.K.3
Dubnau, E.4
Gomez, M.5
Smith, I.6
-
87
-
-
0028221879
-
Characterization of the sigD transcription unit of Bacillus subtilis
-
Marquez-Magana LM, Chamberlin MJ. 1994. Characterization of the sigD transcription unit of Bacillus subtilis. J. Bacteriol. 176:2427-34
-
(1994)
J. Bacteriol.
, vol.176
, pp. 2427-2434
-
-
Marquez-Magana, L.M.1
Chamberlin, M.J.2
-
88
-
-
0027997405
-
Genetic control of bacterial suicide: Regulation of the induction of PBSX in Bacillus subtilis
-
McDonnell GE, Wood H, Devine KM, McConnell DJ. 1994. Genetic control of bacterial suicide: regulation of the induction of PBSX in Bacillus subtilis. J. Bacteriol. 176:5820-30
-
(1994)
J. Bacteriol.
, vol.176
, pp. 5820-5830
-
-
McDonnell, G.E.1
Wood, H.2
Devine, K.M.3
McConnell, D.J.4
-
89
-
-
18344371347
-
Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase-promoter open complex
-
Mekler V, Kortkhonjia E, Mukhopadhyay J, Knight J, Revyakin A, et al. 2002. Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase-promoter open complex. Cell 108:599-614
-
(2002)
Cell
, vol.108
, pp. 599-614
-
-
Mekler, V.1
Kortkhonjia, E.2
Mukhopadhyay, J.3
Knight, J.4
Revyakin, A.5
-
90
-
-
0036132584
-
An inventory of genes encoding RNA polymerase sigma factors in 31 completely sequenced eubacterial genomes
-
Mittenhuber G. 2002. An inventory of genes encoding RNA polymerase sigma factors in 31 completely sequenced eubacterial genomes. J. Mol. Microbiol. Biotechnol. 4:77-91
-
(2002)
J. Mol. Microbiol. Biotechnol.
, vol.4
, pp. 77-91
-
-
Mittenhuber, G.1
-
91
-
-
0026052010
-
Plastid translation and transcription genes in a non-photosynthetic plant: Intact, missing and pseudo genes
-
Morden CW, Wolfe KH, dePamphilis CW, Palmer JD. 1991. Plastid translation and transcription genes in a non-photosynthetic plant: intact, missing and pseudo genes. EMBO J. 10:3281-88
-
(1991)
EMBO J.
, vol.10
, pp. 3281-3288
-
-
Morden, C.W.1
Wolfe, K.H.2
DePamphilis, C.W.3
Palmer, J.D.4
-
92
-
-
0032981534
-
Circadian-regulated expression of a nuclear-encoded plastid sigma factor gene (sigA) in wheat seedlings
-
Morikawa K, Ito S, Tsunoyama Y, Nakahira Y, Shiina T, Toyoshima Y. 1999. Circadian-regulated expression of a nuclear-encoded plastid sigma factor gene (sigA) in wheat seedlings. FEBS Lett. 451:275-78
-
(1999)
FEBS Lett.
, vol.451
, pp. 275-278
-
-
Morikawa, K.1
Ito, S.2
Tsunoyama, Y.3
Nakahira, Y.4
Shiina, T.5
Toyoshima, Y.6
-
93
-
-
0032959546
-
Heat-induced synthesis of sigma32 in Escherichia coli: Structural and functional dissection of rpoH mRNA secondary structure
-
Morita M, Kanemori M, Yanagi H, Yura T. 1999. Heat-induced synthesis of sigma32 in Escherichia coli: structural and functional dissection of rpoH mRNA secondary structure. J. Bacteriol. 181:401-10
-
(1999)
J. Bacteriol.
, vol.181
, pp. 401-410
-
-
Morita, M.1
Kanemori, M.2
Yanagi, H.3
Yura, T.4
-
94
-
-
0001641104
-
Translational induction of heat shock transcription factor sigma32: Evidence for a built-in RNA thermosensor
-
Morita MT, Tanaka Y, Kodama TS, Kyogoku Y, Yanagi H, Yura T. 1999. Translational induction of heat shock transcription factor sigma32: evidence for a built-in RNA thermosensor. Genes Dev. 13:655-65
-
(1999)
Genes Dev.
, vol.13
, pp. 655-665
-
-
Morita, M.T.1
Tanaka, Y.2
Kodama, T.S.3
Kyogoku, Y.4
Yanagi, H.5
Yura, T.6
-
95
-
-
0029990928
-
The response regulator RssB controls stability of the sigma(S) subunit of RNA polymerase in Escherichia coli
-
Muffler A, Fischer D, Altuvia S, Storz G, Hengge-Aronis R. 1996. The response regulator RssB controls stability of the sigma(S) subunit of RNA polymerase in Escherichia coli. EMBO J. 15:1333-39
-
(1996)
EMBO J.
, vol.15
, pp. 1333-1339
-
-
Muffler, A.1
Fischer, D.2
Altuvia, S.3
Storz, G.4
Hengge-Aronis, R.5
-
97
-
-
0037123602
-
Structural basis of transcription initiation: An RNA polymerase holoenzyme-DNA complex
-
Murakami KS, Masuda S, Campbell EA, Muzzin O, Darst SA. 2002. Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex. Science 296:1285-90
-
(2002)
Science
, vol.296
, pp. 1285-1290
-
-
Murakami, K.S.1
Masuda, S.2
Campbell, E.A.3
Muzzin, O.4
Darst, S.A.5
-
98
-
-
0037123659
-
Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 Å resolution
-
Murakami KS, Masuda S, Darst SA. 2002. Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 Å resolution. Science 296:1280-84
-
(2002)
Science
, vol.296
, pp. 1280-1284
-
-
Murakami, K.S.1
Masuda, S.2
Darst, S.A.3
-
99
-
-
0035157654
-
Nitrogen-regulated group 2 sigma factor from Synechocystis sp. strain PCC 6803 involved in survival under nitrogen stress
-
Muro-Pastor AM, Herrero A, Flores E. 2001. Nitrogen-regulated group 2 sigma factor from Synechocystis sp. strain PCC 6803 involved in survival under nitrogen stress. J. Bacteriol. 183:1090-95
-
(2001)
J. Bacteriol.
, vol.183
, pp. 1090-1095
-
-
Muro-Pastor, A.M.1
Herrero, A.2
Flores, E.3
-
100
-
-
0031303334
-
Regions of the Escherichia coli primary sigma factor sigma70 that are involved in interaction with RNA polymerase core enzyme
-
Nagai H, Shimamoto N. 1997. Regions of the Escherichia coli primary sigma factor sigma70 that are involved in interaction with RNA polymerase core enzyme. Genes Cells 2:725-34
-
(1997)
Genes Cells
, vol.2
, pp. 725-734
-
-
Nagai, H.1
Shimamoto, N.2
-
101
-
-
0036285605
-
Roles for sigma factors in global circadian regulation of the cyanobacterial genome
-
Nair U, Ditty JL, Min H, Golden SS. 2002. Roles for sigma factors in global circadian regulation of the cyanobacterial genome. J. Bacteriol. 184:3530-38
-
(2002)
J. Bacteriol.
, vol.184
, pp. 3530-3538
-
-
Nair, U.1
Ditty, J.L.2
Min, H.3
Golden, S.S.4
-
102
-
-
0035116721
-
Mutational analysis of RsrA, a zinc-binding anti-sigma factor with a thiol-disulphide redox switch
-
Paget MS, Bae JB, Hahn MY, Li W, Kleanthous C, et al. 2001. Mutational analysis of RsrA, a zinc-binding anti-sigma factor with a thiol-disulphide redox switch. Mol. Microbiol. 39:1036-47
-
(2001)
Mol. Microbiol.
, vol.39
, pp. 1036-1047
-
-
Paget, M.S.1
Bae, J.B.2
Hahn, M.Y.3
Li, W.4
Kleanthous, C.5
-
103
-
-
0032898961
-
Evidence that the extracytoplasmic function sigma factor sigmaE is required for normal cell wall structure in Streptomyces coelicolor A3(2)
-
Paget MS, Chamberlin L, Atrih A, Foster SJ, Buttner MJ. 1999. Evidence that the extracytoplasmic function sigma factor sigmaE is required for normal cell wall structure in Streptomyces coelicolor A3(2). J. Bacteriol. 181:204-11
-
(1999)
J. Bacteriol.
, vol.181
, pp. 204-211
-
-
Paget, M.S.1
Chamberlin, L.2
Atrih, A.3
Foster, S.J.4
Buttner, M.J.5
-
104
-
-
0032190375
-
SigmaR, an RNA polymerase sigma factor that modulates expression of the thioredoxin system in response to oxidative stress in Streptomyces coelicolor A3(2)
-
Paget MS, Kang JG, Roe JH, Buttner MJ. 1998. sigmaR, an RNA polymerase sigma factor that modulates expression of the thioredoxin system in response to oxidative stress in Streptomyces coelicolor A3(2). EMBO J. 17:5776-82
-
(1998)
EMBO J.
, vol.17
, pp. 5776-5782
-
-
Paget, M.S.1
Kang, J.G.2
Roe, J.H.3
Buttner, M.J.4
-
105
-
-
0033047685
-
A putative two-component signal transduction system regulates sigmaE, a sigma factor required for normal cell wall integrity in Streptomyces coelicolor A3(2)
-
Paget MS, Leibovitz E, Buttner MJ. 1999. A putative two-component signal transduction system regulates sigmaE, a sigma factor required for normal cell wall integrity in Streptomyces coelicolor A3(2). Mol. Microbiol. 33:97-107
-
(1999)
Mol. Microbiol.
, vol.33
, pp. 97-107
-
-
Paget, M.S.1
Leibovitz, E.2
Buttner, M.J.3
-
106
-
-
0035171384
-
Defining the disulphide stress response in Streptomyces coelicolor A3(2): Identification of the sigmaR regulon
-
Paget MS, Molle V, Cohen G, Aharonowitz Y, Buttner MJ. 2001. Defining the disulphide stress response in Streptomyces coelicolor A3(2): identification of the sigmaR regulon. Mol. Microbiol. 42: 1007-20
-
(2001)
Mol. Microbiol.
, vol.42
, pp. 1007-1020
-
-
Paget, M.S.1
Molle, V.2
Cohen, G.3
Aharonowitz, Y.4
Buttner, M.J.5
-
107
-
-
0009337130
-
The ECF sigma factors of Streptomyces coelicolor A3(2)
-
ed. DA Hodgson, CM Thomas, Cambridge, UK: Cambridge Univ. Press
-
Paget SB, Hong H-J, Bibb MJ, Buttner MJ. 2002. The ECF sigma factors of Streptomyces coelicolor A3(2). In SGM Symposium 61: Signals, Switches, Regulons and Cascades: Control of Bacterial Gene Expression, ed. DA Hodgson, CM Thomas, pp. 105-25. Cambridge, UK: Cambridge Univ. Press
-
(2002)
SGM Symposium 61: Signals, Switches, Regulons and Cascades: Control of Bacterial Gene Expression
, pp. 105-125
-
-
Paget, S.B.1
Hong, H.-J.2
Bibb, M.J.3
Buttner, M.J.4
-
108
-
-
0343963178
-
The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12
-
Perez-Rueda E, Collado-Vides J. 2000. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Nucleic Acids Res. 28:1838-47
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 1838-1847
-
-
Perez-Rueda, E.1
Collado-Vides, J.2
-
109
-
-
0029143839
-
A new RNA polymerase sigma factor, sigma F, is required for the late stages of morphological differentiation in Streptomyces spp.
-
Potuckova L, Kelemen GH, Findlay KC, Lonetto MA, Buttner MJ, Kormanec J. 1995. A new RNA polymerase sigma factor, sigma F, is required for the late stages of morphological differentiation in Streptomyces spp. Mol. Microbiol. 17:37-48
-
(1995)
Mol. Microbiol.
, vol.17
, pp. 37-48
-
-
Potuckova, L.1
Kelemen, G.H.2
Findlay, K.C.3
Lonetto, M.A.4
Buttner, M.J.5
Kormanec, J.6
-
110
-
-
0033593022
-
A family of membrane-embedded metalloproteases involved in regulated proteolysis of membrane-associated transcription factors
-
Rudner DZ, Fawcett P, Losick R. 1999. A family of membrane-embedded metalloproteases involved in regulated proteolysis of membrane-associated transcription factors. Proc. Natl. Acad. Sci. USA 96:14765-70
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 14765-14770
-
-
Rudner, D.Z.1
Fawcett, P.2
Losick, R.3
-
111
-
-
0035650593
-
Morphological coupling in development: Lessons from prokaryotes
-
Rudner DZ, Losick R. 2001. Morphological coupling in development: lessons from prokaryotes. Dev. Cell 1:733-42
-
(2001)
Dev. Cell
, vol.1
, pp. 733-742
-
-
Rudner, D.Z.1
Losick, R.2
-
112
-
-
0033136541
-
Developmental stage-specific multi-subunit plastid RNA polymerases (PEP) in wheat
-
Satoh J, Baba K, Nakahira Y, Tsunoyama Y, Shiina T, Toyoshima Y 1999. Developmental stage-specific multi-subunit plastid RNA polymerases (PEP) in wheat. Plant J. 18:407-15
-
(1999)
Plant J.
, vol.18
, pp. 407-415
-
-
Satoh, J.1
Baba, K.2
Nakahira, Y.3
Tsunoyama, Y.4
Shiina, T.5
Toyoshima, Y.6
-
113
-
-
0034808120
-
Crystal structure of the transcription factor sc-mtTFB offers insights into mitochondrial transcription
-
Schubot FD, Chen CJ, Rose JP, Dailey TA, Dailey HA, Wang BC. 2001. Crystal structure of the transcription factor sc-mtTFB offers insights into mitochondrial transcription. Protein Sci. 10:1980-88
-
(2001)
Protein Sci.
, vol.10
, pp. 1980-1988
-
-
Schubot, F.D.1
Chen, C.J.2
Rose, J.P.3
Dailey, T.A.4
Dailey, H.A.5
Wang, B.C.6
-
114
-
-
0036645689
-
Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: A bacterial Sm-like protein
-
Schumacher MA, Pearson RF, Moller T, Valentin-Hansen P, Brennan RG. 2002. Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein. EMBO J. 21:3546-56
-
(2002)
EMBO J.
, vol.21
, pp. 3546-3556
-
-
Schumacher, M.A.1
Pearson, R.F.2
Moller, T.3
Valentin-Hansen, P.4
Brennan, R.G.5
-
115
-
-
0036136710
-
Stress-response sigma factor sigma(H) is essential for morphological differentiation of Streptomyces coelicolor 3(2)
-
Sevcikova B, Benada O, Kofronova O, Kormanec J. 2001. Stress-response sigma factor sigma(H) is essential for morphological differentiation of Streptomyces coelicolor 3(2). Arch. Microbiol. 177:98-106
-
(2001)
Arch. Microbiol.
, vol.177
, pp. 98-106
-
-
Sevcikova, B.1
Benada, O.2
Kofronova, O.3
Kormanec, J.4
-
116
-
-
0030589041
-
Domain organization of the Escherichia coli RNA polymerase sigma 70 subunit
-
Severinova E, Severinov K, Fenyö D, Marr M, Brody EN, et al. 1996. Domain organization of the Escherichia coli RNA polymerase sigma 70 subunit. J. Mol. Biol. 263:637-47
-
(1996)
J. Mol. Biol.
, vol.263
, pp. 637-647
-
-
Severinova, E.1
Severinov, K.2
Fenyö, D.3
Marr, M.4
Brody, E.N.5
-
117
-
-
0037032826
-
Generating and exploiting polarity in bacteria
-
Shapiro L, McAdams HH, Losick R. 2002. Generating and exploiting polarity in bacteria. Science 298:1942-46
-
(2002)
Science
, vol.298
, pp. 1942-1946
-
-
Shapiro, L.1
McAdams, H.H.2
Losick, R.3
-
118
-
-
0035180675
-
Control of the ferric citrate transport system of Escherichia coli: Mutations in region 2.1 of the FecI extracytoplasmic-function sigma factor suppress mutations in the FecR transmembrane regulatory protein
-
Stiefel A, Mahren S, Ochs M, Schindler PT, Enz S, Braun V. 2001. Control of the ferric citrate transport system of Escherichia coli: Mutations in region 2.1 of the FecI extracytoplasmic-function sigma factor suppress mutations in the FecR transmembrane regulatory protein. J. Bacteriol. 183:162-70
-
(2001)
J. Bacteriol.
, vol.183
, pp. 162-170
-
-
Stiefel, A.1
Mahren, S.2
Ochs, M.3
Schindler, P.T.4
Enz, S.5
Braun, V.6
-
119
-
-
0030457111
-
Molecular genetics of sporulation in Bacillus subtilis
-
Stragier P, Losick R. 1996. Molecular genetics of sporulation in Bacillus subtilis. Annu. Rev. Genet. 30:297-41
-
(1996)
Annu. Rev. Genet.
, vol.30
, pp. 297-341
-
-
Stragier, P.1
Losick, R.2
-
121
-
-
0034192966
-
The biology of enhancer-dependent transcriptional regulation in bacteria: Insights from genome sequences
-
Studholme DJ, Buck M. 2000. The biology of enhancer-dependent transcriptional regulation in bacteria: insights from genome sequences. FEMS Microbiol. Lett. 186:1-9
-
(2000)
FEMS Microbiol. Lett.
, vol.186
, pp. 1-9
-
-
Studholme, D.J.1
Buck, M.2
-
122
-
-
0034635484
-
Low resolution structure of the sigma54 transcription factor revealed by X-ray solution scattering
-
Svergun DI, Malfois M, Koch MH, Wigneshweraraj SR, Buck M. 2000. Low resolution structure of the sigma54 transcription factor revealed by X-ray solution scattering. J. Biol. Chem. 275:4210-14
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 4210-4214
-
-
Svergun, D.I.1
Malfois, M.2
Koch, M.H.3
Wigneshweraraj, S.R.4
Buck, M.5
-
123
-
-
0033608976
-
Characterization of two chloroplast RNA polymerase sigma factors from Zea mays: Photoregulation and differential expression
-
Tan S, Troxler RF. 1999. Characterization of two chloroplast RNA polymerase sigma factors from Zea mays: photoregulation and differential expression. Proc. Natl. Acad. Sci. USA 96:5316-21
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 5316-5321
-
-
Tan, S.1
Troxler, R.F.2
-
124
-
-
0030843866
-
Characterization of three cDNA species encoding plastid RNA polymerase sigma factors in Arabidopsis thaliana: Evidence for the sigma factor heterogeneity in higher plant plastids
-
Tanaka K, Tozawa Y, Mochizuki N, Shinozaki K, Nagatani A, et al. 1997. Characterization of three cDNA species encoding plastid RNA polymerase sigma factors in Arabidopsis thaliana: evidence for the sigma factor heterogeneity in higher plant plastids. FEBS Lett. 413:309-13
-
(1997)
FEBS Lett.
, vol.413
, pp. 309-313
-
-
Tanaka, K.1
Tozawa, Y.2
Mochizuki, N.3
Shinozaki, K.4
Nagatani, A.5
-
125
-
-
0027173145
-
Phosphorylation and dephosphorylation affect functional characteristics of chloroplast and etioplast transcription systems from mustard (Sinapis alba L.)
-
124a. Tiller K, Link G. 1993. Phosphorylation and dephosphorylation affect functional characteristics of chloroplast and etioplast transcription systems from mustard (Sinapis alba L.). EMBO J. 12:1745-53
-
(1993)
EMBO J.
, vol.12
, pp. 1745-1753
-
-
Tiller, K.1
Link, G.2
-
127
-
-
0031793242
-
Levels of DnaK and DnaJ provide tight control of heat shock gene expression and protein repair in Escherichia coli
-
Tomoyasu T, Ogura T, Tatsuta T, Bukau B. 1998. Levels of DnaK and DnaJ provide tight control of heat shock gene expression and protein repair in Escherichia coli. Mol. Microbiol. 30:567-81
-
(1998)
Mol. Microbiol.
, vol.30
, pp. 567-581
-
-
Tomoyasu, T.1
Ogura, T.2
Tatsuta, T.3
Bukau, B.4
-
128
-
-
0029116754
-
Mitochondrial transcription initiation: Promoter structures and RNA polymerases
-
Tracy RL, Stern DB. 1995. Mitochondrial transcription initiation: promoter structures and RNA polymerases. Curr. Genet. 28:205-16
-
(1995)
Curr. Genet.
, vol.28
, pp. 205-216
-
-
Tracy, R.L.1
Stern, D.B.2
-
129
-
-
0029966080
-
A sigma factor that modifies the circadian expression of a subset of genes in cyanobacteria
-
Tsinoremas NF, Ishiura M, Kondo T, Andersson CR, Tanaka K, et al. 1996. A sigma factor that modifies the circadian expression of a subset of genes in cyanobacteria. EMBO J. 15:2488-95
-
(1996)
EMBO J.
, vol.15
, pp. 2488-2495
-
-
Tsinoremas, N.F.1
Ishiura, M.2
Kondo, T.3
Andersson, C.R.4
Tanaka, K.5
-
130
-
-
0037071844
-
Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 Å resolution
-
Vassylyev DG, Sekine S, Laptenko O, Lee J, Vassylyeva MN, et al. 2002. Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 Å resolution. Nature 417:712-19
-
(2002)
Nature
, vol.417
, pp. 712-719
-
-
Vassylyev, D.G.1
Sekine, S.2
Laptenko, O.3
Lee, J.4
Vassylyeva, M.N.5
-
131
-
-
0036046297
-
Iron transport and regulation, cell signalling and genomics: Lessons from Escherichia coli and Pseudomonas
-
Visca P, Leoni L, Wilson MJ, Lamont IL. 2002. Iron transport and regulation, cell signalling and genomics: lessons from Escherichia coli and Pseudomonas. Mol. Microbiol. 45:1177-90
-
(2002)
Mol. Microbiol.
, vol.45
, pp. 1177-1190
-
-
Visca, P.1
Leoni, L.2
Wilson, M.J.3
Lamont, I.L.4
-
132
-
-
0035827134
-
Domain 1.1 of the sigma(70) subunit of Escherichia coli RNA polymerase modulates the formation of stable polymerase/promoter complexes
-
Vuthoori S, Bowers CW, McCracken A, Dombroski AJ, Hinton DM. 2001. Domain 1.1 of the sigma(70) subunit of Escherichia coli RNA polymerase modulates the formation of stable polymerase/promoter complexes. J. Mol. Biol. 309: 561-72
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 561-572
-
-
Vuthoori, S.1
Bowers, C.W.2
McCracken, A.3
Dombroski, A.J.4
Hinton, D.M.5
-
133
-
-
0037133946
-
Small RNAs in bacteria: Diverse regulators of gene expression in response to environmental changes
-
Wassarman KM. 2002. Small RNAs in bacteria: diverse regulators of gene expression in response to environmental changes. Cell 109:141-44
-
(2002)
Cell
, vol.109
, pp. 141-144
-
-
Wassarman, K.M.1
-
134
-
-
0034625237
-
6S RNA regulates E. coli RNA polymerase activity
-
Wassarman KM, Storz G. 2000. 6S RNA regulates E. coli RNA polymerase activity. Cell 101:613-23
-
(2000)
Cell
, vol.101
, pp. 613-623
-
-
Wassarman, K.M.1
Storz, G.2
-
135
-
-
0037474295
-
Multiple roles of the RNA polymerase beta subunit flap domain in sigma 54 dependent transcription
-
Wigneshweraraj SR, Kuznedelov K, Severinov K, Buck M. 2003. Multiple roles of the RNA polymerase beta subunit flap domain in sigma 54 dependent transcription. J. Biol. Chem. 278:3455-65
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 3455-3465
-
-
Wigneshweraraj, S.R.1
Kuznedelov, K.2
Severinov, K.3
Buck, M.4
-
136
-
-
0031581917
-
Region 1 of sigma70 is required for efficient isomerization and initiation of transcription by Escherichia coli RNA polymerase
-
Wilson C, Dombroski AJ. 1997. Region 1 of sigma70 is required for efficient isomerization and initiation of transcription by Escherichia coli RNA polymerase. J. Mol. Biol. 267:60-74
-
(1997)
J. Mol. Biol.
, vol.267
, pp. 60-74
-
-
Wilson, C.1
Dombroski, A.J.2
-
137
-
-
0028895391
-
Quantitative control of the stationary phase-specific sigma factor, sigma S, in Escherichia coli: Involvement of the nucleoid protein H-NS
-
Yamashino T, Ueguchi C, Mizuno T. 1995, Quantitative control of the stationary phase-specific sigma factor, sigma S, in Escherichia coli: involvement of the nucleoid protein H-NS. EMBO J. 14:594-602
-
(1995)
EMBO J.
, vol.14
, pp. 594-602
-
-
Yamashino, T.1
Ueguchi, C.2
Mizuno, T.3
-
138
-
-
0006120217
-
The cDNA sequence of AtSig4, a new member of the nuclear-encoded sigma-like factor gene family in Arabidopsis thaliana
-
(Accession no. AF101075), (PGR98-212)
-
Yao J, Allison LA. 1998. The cDNA sequence of AtSig4, a new member of the nuclear-encoded sigma-like factor gene family in Arabidopsis thaliana. (Accession no. AF101075), (PGR98-212). Plant Physiol. 118:1533
-
(1998)
Plant Physiol.
, vol.118
, pp. 1533
-
-
Yao, J.1
Allison, L.A.2
-
139
-
-
0035967922
-
A coiled-coil from the RNA polymerase β′ subunit allosterically induces selective non-template strand binding by σ
-
Young BA, Anthony LC, Gruber TM, Arthur TM, Heyduk E, et al. 2001. A coiled-coil from the RNA polymerase β′ subunit allosterically induces selective non-template strand binding by σ. Cell 105:935-44
-
(2001)
Cell
, vol.105
, pp. 935-944
-
-
Young, B.A.1
Anthony, L.C.2
Gruber, T.M.3
Arthur, T.M.4
Heyduk, E.5
-
140
-
-
0037123763
-
Views of transcription initiation
-
Young BA, Gruber TM, Gross CA. 2002. Views of transcription initiation. Cell 109:417-20
-
(2002)
Cell
, vol.109
, pp. 417-420
-
-
Young, B.A.1
Gruber, T.M.2
Gross, C.A.3
-
141
-
-
0001897486
-
The heat shock response: Regulation and function
-
ed. G Storz, R Hengge-Aronis, Washington, DC: ASM
-
Yura T, Kanemori M, Morita MT. 2000. The heat shock response: regulation and function. In Bacterial Stress Response, ed. G Storz, R Hengge-Aronis, pp. 3-18. Washington, DC: ASM
-
(2000)
Bacterial Stress Response
, pp. 3-18
-
-
Yura, T.1
Kanemori, M.2
Morita, M.T.3
-
142
-
-
0031596513
-
The prosequence of pro-sigmaK promotes membrane association and inhibits RNA polymerase core binding
-
Zhang B, Hofmeister A, Kroos L. 1998. The prosequence of pro-sigmaK promotes membrane association and inhibits RNA polymerase core binding. J. Bacteriol. 180:2434-41
-
(1998)
J. Bacteriol.
, vol.180
, pp. 2434-2441
-
-
Zhang, B.1
Hofmeister, A.2
Kroos, L.3
-
143
-
-
0035281566
-
The RssB response regulator directly targets sigma(S) for degradation by ClpXP
-
Zhou Y, Gottesman S, Hoskins JR, Maurizi MR, Wickner S. 2001. The RssB response regulator directly targets sigma(S) for degradation by ClpXP. Genes Dev. 15:627-37
-
(2001)
Genes Dev.
, vol.15
, pp. 627-637
-
-
Zhou, Y.1
Gottesman, S.2
Hoskins, J.R.3
Maurizi, M.R.4
Wickner, S.5
-
144
-
-
0032539903
-
The rpoB mutants destabilizing initiation complexes at stringently controlled promoters behave like "stringent" RNA polymerases in Escherichia coli
-
Zhou YN, Jin DJ. 1998. The rpoB mutants destabilizing initiation complexes at stringently controlled promoters behave like "stringent" RNA polymerases in Escherichia coli. Proc. Natl. Acad. Sci. USA 95:2908-13
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 2908-2913
-
-
Zhou, Y.N.1
Jin, D.J.2
-
145
-
-
0035139973
-
Putative sigma factor SigI (YkoZ) of Bacillus subtilis is induced by heat shock
-
Zuber U, Drzewiecki K, Hecker M. 2001. Putative sigma factor SigI (YkoZ) of Bacillus subtilis is induced by heat shock. J. Bacteriol. 183:1472-75
-
(2001)
J. Bacteriol.
, vol.183
, pp. 1472-1475
-
-
Zuber, U.1
Drzewiecki, K.2
Hecker, M.3
|