메뉴 건너뛰기




Volumn 185, Issue 19, 2003, Pages 5673-5684

Experimental determination and system level analysis of essential genes in Escherichia coli MG1655

Author keywords

[No Author keywords available]

Indexed keywords

GENE PRODUCT;

EID: 0141504252     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.185.19.5673-5684.2003     Document Type: Article
Times cited : (619)

References (39)
  • 1
    • 0037154255 scopus 로고    scopus 로고
    • A genome-scale analysis for identification of genes required for growth or survival of Haemophilus influenzae
    • Akerley B. J., E. J. Rubin, V. L. Novick, K. Amaya, N. Judson, and J. J. Mekalanos. 2002. A genome-scale analysis for identification of genes required for growth or survival of Haemophilus influenzae. Proc. Natl. Acad. Sci. USA 99:966-971.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 966-971
    • Akerley, B.J.1    Rubin, E.J.2    Novick, V.L.3    Amaya, K.4    Judson, N.5    Mekalanos, J.J.6
  • 2
    • 0017880659 scopus 로고
    • Tandem chromosomal duplications in Salmonella typhimurium: Fusion of histidine genes to novel promoters
    • Anderson, R. P., and J. R. Roth. 1978. Tandem chromosomal duplications in Salmonella typhimurium: fusion of histidine genes to novel promoters. J. Mol. Biol. 119:147-166.
    • (1978) J. Mol. Biol. , vol.119 , pp. 147-166
    • Anderson, R.P.1    Roth, J.R.2
  • 5
    • 0036500834 scopus 로고    scopus 로고
    • Reverse engineering of biological complexity
    • Csete, M. E., and J. C. Doyle. 2002. Reverse engineering of biological complexity. Science 295:1664-1669.
    • (2002) Science , vol.295 , pp. 1664-1669
    • Csete, M.E.1    Doyle, J.C.2
  • 6
    • 0036001069 scopus 로고    scopus 로고
    • Metabolic modelling of microbes: The flux-balance approach
    • Edwards, J. S., M. Covert, and B. Palsson. 2002. Metabolic modelling of microbes: the flux-balance approach. Environ. Microbiol. 4:133-140.
    • (2002) Environ. Microbiol. , vol.4 , pp. 133-140
    • Edwards, J.S.1    Covert, M.2    Palsson, B.3
  • 8
    • 0034924493 scopus 로고    scopus 로고
    • SWISS-PROT: Connecting biomolecular knowledge via a protein database
    • Gasteiger, E., E. Jung, and A. Balroch. 2001. SWISS-PROT: connecting biomolecular knowledge via a protein database. Curr. Issues Mol. Biol. 3:47-55.
    • (2001) Curr. Issues Mol. Biol. , vol.3 , pp. 47-55
    • Gasteiger, E.1    Jung, E.2    Balroch, A.3
  • 11
    • 0033987603 scopus 로고    scopus 로고
    • Insertional transposon mutagenesis by electroporation of released Tn5 transposition complexes
    • Goryshin, I. Y., J. Jendrisak, L. M. Hoffman, R. Meis, and W. S. Reznikoff. 2000. Insertional transposon mutagenesis by electroporation of released Tn5 transposition complexes. Nat. Biotechnol. 18:97-100.
    • (2000) Nat. Biotechnol. , vol.18 , pp. 97-100
    • Goryshin, I.Y.1    Jendrisak, J.2    Hoffman, L.M.3    Meis, R.4    Reznikoff, W.S.5
  • 14
    • 0035319006 scopus 로고    scopus 로고
    • Computational studies of gene regulatory networks: In numero molecular biology
    • Hasty, J., D. McMillen, F. Isaacs, and J. J. Collins. 2001. Computational studies of gene regulatory networks: in numero molecular biology. Nat. Rev. Genet. 2:268-279.
    • (2001) Nat. Rev. Genet. , vol.2 , pp. 268-279
    • Hasty, J.1    McMillen, D.2    Isaacs, F.3    Collins, J.J.4
  • 16
    • 0027251266 scopus 로고
    • The Escherichia coli K-12 "wild types" W3110 and MG1655 have an rph frameshift mutation that leads to pyrimidine starvation due to low pyrE expression levels
    • Jensen, K. F. 1993. The Escherichia coli K-12 "wild types" W3110 and MG1655 have an rph frameshift mutation that leads to pyrimidine starvation due to low pyrE expression levels. J. Bacteriol. 175:3401-3407.
    • (1993) J. Bacteriol. , vol.175 , pp. 3401-3407
    • Jensen, K.F.1
  • 18
    • 0035929121 scopus 로고    scopus 로고
    • Identification of critical staphylococcal genes using conditional phenotypes generated by antisense RNA
    • Ji, Y., B. Zhang, S. F. Van Horn, P. Warren, G. Woodnutt, M. K. Burnbam, and M. Rosenberg. 2001. Identification of critical staphylococcal genes using conditional phenotypes generated by antisense RNA. Science 293:2266-2269.
    • (2001) Science , vol.293 , pp. 2266-2269
    • Ji, Y.1    Zhang, B.2    Van Horn, S.F.3    Warren, P.4    Woodnutt, G.5    Burnbam, M.K.6    Rosenberg, M.7
  • 19
    • 0036078078 scopus 로고    scopus 로고
    • Essential genes are more evolutionarily conserved than are nonessential genes in bacteria
    • Jordan, I. K., I. B. Rogozin, Y. I. Wolf, and E. V. Koonin. 2002. Essential genes are more evolutionarily conserved than are nonessential genes in bacteria. Genome Res. 12:962 968.
    • (2002) Genome Res. , vol.12 , pp. 962-968
    • Jordan, I.K.1    Rogozin, I.B.2    Wolf, Y.I.3    Koonin, E.V.4
  • 22
    • 0037079054 scopus 로고    scopus 로고
    • Computational systems, biology
    • Kitano, H. 2002. Computational systems, biology. Nature 420:206-210.
    • (2002) Nature , vol.420 , pp. 206-210
    • Kitano, H.1
  • 23
    • 0345668475 scopus 로고    scopus 로고
    • Essential Bacillus subtilis genes
    • Kobayashi, K., et al. 2003. Essential Bacillus subtilis genes. Proc. Natl. Acad. USA 100:4678-4683.
    • (2003) Proc. Natl. Acad. USA , vol.100 , pp. 4678-4683
    • Kobayashi, K.1
  • 24
    • 0037079014 scopus 로고    scopus 로고
    • The structure of the protein universe and genome evolution
    • Koonin, E. V., Y. I. Wolf, and G. P. Karev. 2002. The structure of the protein universe and genome evolution. Nature 420:218-223.
    • (2002) Nature , vol.420 , pp. 218-223
    • Koonin, E.V.1    Wolf, Y.I.2    Karev, G.P.3
  • 25
    • 0032828663 scopus 로고    scopus 로고
    • Universal protein families and the functional content of the last universal common ancestor
    • Kyrpides, N., R. Overbeek, and C. Ouzounis. 1999. Universal protein families and the functional content of the last universal common ancestor. J. Mol. Evol. 49:413-423.
    • (1999) J. Mol. Evol. , vol.49 , pp. 413-423
    • Kyrpides, N.1    Overbeek, R.2    Ouzounis, C.3
  • 28
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson, W. R., and D. J. Lipman. 1988. Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85:2444-2448.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 29
    • 0037199968 scopus 로고    scopus 로고
    • Hierarchical organization of modularity in metabolic networks
    • Ravasz, E., A. L. Somera, D. A. Mongru, Z. N. Oltvai, and A.-L. Barabási. 2002. Hierarchical organization of modularity in metabolic networks. Science 297:1551-1555.
    • (2002) Science , vol.297 , pp. 1551-1555
    • Ravasz, E.1    Somera, A.L.2    Mongru, D.A.3    Oltvai, Z.N.4    Barabási, A.-L.5
  • 30
    • 0034678055 scopus 로고    scopus 로고
    • Harnessing the power of the genome in the search for new antibiotics
    • Rosamond, J., and A. Allsop. 2000. Harnessing the power of the genome in the search for new antibiotics. Science 287:1973-1976.
    • (2000) Science , vol.287 , pp. 1973-1976
    • Rosamond, J.1    Allsop, A.2
  • 32
    • 0035940515 scopus 로고    scopus 로고
    • Comprehensive identification of conditionally essential genes in mycobacteria
    • Sassetti, C. M., D. H. Boyd, and E. J. Rubin. 2001. Comprehensive identification of conditionally essential genes in mycobacteria. Proc. Natl. Acad. Sci. USA 98:12712-12717.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 12712-12717
    • Sassetti, C.M.1    Boyd, D.H.2    Rubin, E.J.3
  • 33
    • 0031827017 scopus 로고    scopus 로고
    • Arginine catabolism and the arginine succinyltransferase pathway in Escherichia coli
    • Schneider, B. L., A. K. Kiupakis, and L. J. Reitzer. 1998. Arginine catabolism and the arginine succinyltransferase pathway in Escherichia coli. J. Bacteriol. 180:4278-4286.
    • (1998) J. Bacteriol. , vol.180 , pp. 4278-4286
    • Schneider, B.L.1    Kiupakis, A.K.2    Reitzer, L.J.3
  • 34
    • 0029022831 scopus 로고
    • Genetic footprinting: A genomic strategy for determining a gene's function given its sequence
    • Smith, V., D. Botstein, and P. O. Brown, 1995. Genetic footprinting: a genomic strategy for determining a gene's function given its sequence. Proc. Natl. Acad. Sci. USA 92:6479-6483.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 6479-6483
    • Smith, V.1    Botstein, D.2    Brown, P.O.3
  • 35
    • 0037079050 scopus 로고    scopus 로고
    • Metabolic network structure determines key aspects of functionality and regulation
    • Stelling, J., S. Klamt, K. Bettenbrock, S. Schuster, and E. D. Gilles. 2002. Metabolic network structure determines key aspects of functionality and regulation. Nature 420:190-193.
    • (2002) Nature , vol.420 , pp. 190-193
    • Stelling, J.1    Klamt, S.2    Bettenbrock, K.3    Schuster, S.4    Gilles, E.D.5
  • 36
    • 0037100683 scopus 로고    scopus 로고
    • Identification of 113 conserved essential genes using a high-throughput gene disruption system in Streptococcus pneumoniae
    • Thanassi, J. A., S. L. Hartman-Neumann, T. J. Dougherty, B. A. Dougherty, and M. J. Pucci. 2002. Identification of 113 conserved essential genes using a high-throughput gene disruption system in Streptococcus pneumoniae. Nucleic Acids Res. 30:3152-3162.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 3152-3162
    • Thanassi, J.A.1    Hartman-Neumann, S.L.2    Dougherty, T.J.3    Dougherty, B.A.4    Pucci, M.J.5
  • 37
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 38
    • 0034029892 scopus 로고    scopus 로고
    • Robustness against mutations in genetic networks of yeast
    • Wagner, A. 2000. Robustness against mutations in genetic networks of yeast. Nat. Genet. 24:355-361.
    • (2000) Nat. Genet. , vol.24 , pp. 355-361
    • Wagner, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.