SWISS-PROT: Connecting biomolecular knowledge via a protein database

Current Issues in Molecular Biology

Volumn 3, Issue 3, 2001, Pages 47-55

  Gasteiger, E ^a   Jung, E ^a   Bairoch, A ^a  

^a SWISS INSTITUTE OF BIOINFORMATICS   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; NUCLEOTIDE; PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; BIOMEDICINE; CLINICAL RESEARCH; DATA BASE; INFORMATION PROCESSING; INFORMATION SYSTEM; MOLECULAR DYNAMICS; NUCLEOTIDE SEQUENCE; PROTEIN ANALYSIS; PROTEIN TERTIARY STRUCTURE; PUBLICATION; REVIEW; SCIENTIFIC LITERATURE;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; DATABASES, PROTEIN; HUMANS; INTERNET; PROTEIN STRUCTURE, TERTIARY;

EID: 0034924493     PISSN: 14673037     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (55)

1. Federated 2-DE database: A simple means of publishing 2-DE data
2. InterPro - An integrated documentation resource for protein families, domains and functional sites
3. PRINTS-S: The database formerly known as PRINTS
4. The ENZYME database in 2000
5. The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000
6. Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data
7. The Pfam protein families database
8. GenBank
9. The PDB data uniformity project
10. The Mouse Genome Database (MGD): Integration nexus for the laboratory mouse
11. The PRESAGE database for structural genomics
12. Human and mouse proteomic databases: Novel resources in the protein universe
13. Learning from the genome sequence of Mycobacterium tuberculosis H37Rv
14. GlycoSuiteDB: A new curated relational database of glycoprotein glycan structures and their biological sources
15. ProDom and ProDom-CG: Tools for protein domain analysis and whole genome comparisons
16. YPD, PombePD and WormPD: Model organism volumes of the BioKnowledge library, an integrated resource for protein information
17. The HSSP database of protein structure-sequence alignments and family profiles
18. The Complex Carbohydrate Structure Database
19. Construction of HSC-2DPAGE: A two-dimensional gel electrophoresis database of heart proteins
20. How representative are the known structures of the proteins in a complete genome? A comprehensive structural census
21. DOMO: A new database of aligned protein domains
22. Increased coverage of protein families with the blocks database servers
23. The PROSITE database, its status in 1999
24. The 1999 SWISS-2DPAGE database update
25. Collecting and harvesting biological data: The GPCRDB and NucleaRDB information systems
26. The EcoCyc and MetaCyc databases
27. HUGE: A database for human large proteins identified in the Kazusa cDNA sequencing project
28. GCRDb: A G-protein-coupled receptor database
29. Human Retroviruses and AIDS 1999: A Compilation and Analysis of Nucleic Acid and Amino Acid Sequences
30. A Saccharomyces cerevisiae Internet protein resource now available
31. IMGT, the international ImMunoGeneTics database
32. The complete genome of Bacillus subtilis: From sequence annotation to data management and analysis
33. The Enhanced Microbial Genomes Library
34. The non-redundant Bacillus subtilis (NRSub) database: Update 1998
35. The Swiss-3DImage collection and PDB-Browser on the World-Wide Web
36. MaizeDB: Integrated maize genome resource. Community curation, database interoperability, and comparative map displays
37. Mendel, a database of nomenclature for sequenced plant genes
38. The TIGR Gene Indices: Analysis of gene transcript sequences in highly sampled eukaryotic species
39. MEROPS: The peptidase database
40. GeneCards: A novel functional genomics compendium with automated data mining and query reformulation support
41. REBASE-restriction enzymes and methylases
42. EcoGene: A genome sequence database for Escherichia coli K-12
43. Genetic map of Salmonella typhimurium, edition VIII
44. DictyDB - A Genomic Database for Dictyostelium discoideum
45. Analysis of protein domain families in Caenorhabditis elegans
46. The Zebrafish Information Network (ZFIN): A resource for genetic, genomic and developmental research
47. The EMBL nucleotide sequence database
48. DNA Data Bank of Japan (DDBJ) in collaboration with mass sequencing teams
49. The FlyBase database of the Drosophila Genome Projects and community literature
50. The maize two dimensional gel protein database: Towards an integrated genome analysis program
51. Diagnosis of cellular states of microbial organisms using proteomics
52. Database resources of the National Center for Biotechnology Information
53. DIP: The Database of Interacting Proteins: 2001 update
54. ProtoMap: Automatic classification of protein sequences and hierarchy of protein families