What does 'chromatin remodeling' mean?

Trends in Biochemical Sciences

Volumn 25, Issue 11, 2000, Pages 548-555

  Aalfs, Jeff D ^a,b   Kingston, Robert E ^a,b  

^a MASSACHUSETTS GENERAL HOSPITAL   (United States)

^b HARVARD MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATE; HEAT SHOCK PROTEIN 70; HISTONE;

CHROMATIN STRUCTURE; COMPLEX FORMATION; DROSOPHILA; GENE ACTIVATION; GENE FUNCTION; NONHUMAN; NUCLEOSOME; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN MODIFICATION; REACTION ANALYSIS; REGULATORY MECHANISM; REVIEW; STRUCTURE ANALYSIS; TRANSCRIPTION REGULATION;

ADENOSINE TRIPHOSPHATASES; ADENOSINE TRIPHOSPHATE; ANIMALS; CHROMATIN; DEOXYRIBONUCLEASES, TYPE II SITE-SPECIFIC; DROSOPHILA PROTEINS; FUNGAL PROTEINS; HISTONES; HSP70 HEAT-SHOCK PROTEINS; HUMANS; PROMOTER REGIONS (GENETICS); RIBONUCLEOPROTEIN, U1 SMALL NUCLEAR; RNA-BINDING PROTEINS; SACCHAROMYCES CEREVISIAE PROTEINS; TRANSCRIPTION FACTORS; YEASTS;

EID: 0034326355     PISSN: 09680004     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0968-0004(00)01689-3     Document Type: Review

References (46)

1. Affinity chromatographic purification of nucleosomes containing transcriptionally active DNA sequences
2. Affinity chromatography of mammalian and yeast nucleosomes. Two modes of binding of transcriptionally active mammalian nucleosomes to organomercurial-agarose columns, and contrasting behavior of the active nucleosomes of yeast
3. An activity gel assay detects a single, catalytically active histone acetyltransferase subunit in Tetrahymena macronuclei
4. A mammalian histone deacetylase related to the yeast transcriptional regulator Rpd3p
5. NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities
6. Facilitated binding of TATA-binding protein to nucleosomal DNA
7. Nucleosome disruption and enhancement of activator binding by a human SWI/SNF complex
8. Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex
9. RSC, an essential, abundant chromatin-remodeling complex
10. Purification and properties of an ATP-dependent nucleosome remodeling factor
11. ACF, an ISWI-containing and ATP-utilizing chromatin assembly and remodeling factor
12. Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II
13. The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I
14. Change in the pattern of histone binding to DNA upon transcriptional activation
15. RNA polymerase II interacts with the promoter region of the noninduced HSP70 gene in Drosophila melanogaster cells
16. The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of Drosophila melanogaster is transcriptionally engaged
17. Activating protein factor binds in vitro to upstream control sequences in heat shock gene chromatin
18. ISWI, a member of the SWI2/SNF2 ATPase family, encodes the 140 kDa subunit of the nucleosome remodeling factor
19. Five SWI genes are required for expression of the HO gene in yeast
20. Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter
21. Cell cycle-regulated histone acetylation required for expression of the yeast HO gene
22. Characterization of the yeast SWI1, SWI2 and SWI3 genes, which encode a global activator of transcription
23. Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: Characterization of an Ada complex and the SAGA (Spt/Ada) complex
24. Glucocorticoid receptor-dependent disruption of a specific nucleosome on the mouse mammary tumor virus promoter is prevented by sodium butyrate
25. Removal of positioned nucleosomes from the yeast pHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements
26. Absence of Gcn5 HAT activity defines a novel state in the opening of chromatin at the PHO5 promoter in yeast
27. Genes affecting the regulation of SUC2 gene expression by glucose repression in Saccharomyces cerevisiae
28. Reconstitution of a core chromatin remodeling complex from SWI/SNF subunits
29. Characterization of the imitation switch subfamily of ATP-dependent chromatin-remodeling factors in Saccharomyces cerevisiae
30. Requirement of RSF and FACT for transcription of chromatin templates in vitro
31. A family of chromatin remodeling factors related to williams syndrome transcription transcription factor
32. ISWI is an ATP-dependent nucleosome remodeling factor
33. Nucleosome movement by CHRAC and ISWI without disruption or trans- displacement of the histone octamer
34. ATP-dependent histone octamer sliding mediated by the chromatin remodeling complex NURF
35. Nucleosome mobilization catalysed by the yeast SWI/SNF complex
36. Histone octamer transfer by a chromatin-remodeling complex
37. Stable remodeling of tailless nucleosomes by the human SWI-SNF complex
38. Human SWI/SNF interconverts a nucleosome between its base state and a stable remodeled state
39. Activated RSC-nucleosome complex and persistently altered form of the nucleosome
40. The histone tails of the nucleosome
41. The core histone N-terminal domains are required for multiple rounds of catalytic chromatin remodeling by the SWI/SNF and RSC complexes
42. Role of histone tails in nucleosome remodeling by Drosophila NURF
43. Whole-genome expression analysis of snf/swi mutants of Saccharomyces cerevisiae
44. Chromatin remodelling by the glucocorticoid receptor requires the BRG1 complex
45. Mammalian SWI-SNF complexes contribute to activation of the hsp70 gene
46. The Drosophila trithorax group proteins BRM, ASH1 and ASH2 are subunits of distinct protein complexes